CmoCh20G009760 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G009760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SUMO-conjugating enzyme SCE1
Location	Cmo_Chr20: 5425906 .. 5428649 (-)
RNA-Seq Expression	CmoCh20G009760
Synteny	CmoCh20G009760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAATGATGAGGCCATGCCGAAGTGTCGAGACGCCATTTCGAGAATTGGCGTGATTCTCAAGCGACGTTTTCGAACTCCAAAGAAAAGAGATAAAGAAAAAAGAAAAGAGTAATCCCACAGATTCTGATTTGACTTTTGAATTTAATTTTCCCTCGATATTTATCCAAATTCAAAACCCGATTTTATGCTTCACTCATGAATCTCAGCCGTACGTTTGATTCAACTCCGACTCTCTGCGACTGCTCCACTACTTCTCTCTTCCTCCTATAAGTCTAGTGTGTCCGGCTGTTTCTCTCCTTCTTTCCTGTGGTGGGATCGCCGATTCAGGGGTCGAAGATTTGTTGATTTCTTGATACAGAGACCGACAGCCATGTCCGGTGGTATTGCACGAGGTCGTCTTGCGGAGGAGCGGAAGTCGTGGCGGAAGAATCATCCGCATGTGGGTATTCGCTTCTTGTTTTGCTATGTTGTCTTCTGTACGGTGAAGGACCTTGGTTTTGTTTTGATTTTTTCGTGTTTTTTAGGGTTTTGTTGCGAAACCGGAGACTATGCCTGATGGAACGGTCAATTTGATGATTTGGCATTGCATTATTCCTGGCAAAGTTGGGGTATGCTTTTCTCTTGCAATTTTTGTGGATGTGTTTTGAATTCGGGTTTTGATTTATGGGTTGATTGTTGTTTTTGATATTATGCAGTTCATGCCTAATTGCAATATCTTGCATGCCCTAATTCTTGTCTATTTGAATGGATCCTTCACCAACTTGATTTATCCTTGGATTTTCTTTTCCCTTTTTATCTGGTTACTTCACCGGTTCTGTACTTGATCTTTGCTTCAAACTTACATCTTCTCTCTTTACGCTAGAACTTTATTTTCACTCAAGCAACCTTAGACGTTTGGGAATCTCTTAGTTTTGAAGTATACATTCTGGTAATAGTGATATTCAGCATAATAATTTAGTTGGAAAGGGTCTAGTCATTTGTGTTTAATCTATACTCCTTGCCTAATTTGTTGATTTCCCATGTAATTAAAATTGGTGTTTGTCCTATTAGAGCCTTTAATTTGTCGTTGTTGTTCTTCATATCGTTTTAATGGGGAAGTACTATCATTAGAGATAGCAAAATACAAAAGGGTGATTTAGAAATCAACCCAAAACCATGGGGATTACAAGTTCTCCTGTTGATTCTAATCAGAAAAGAATTCTAGTTATAAAAAGATTCTAGGCGGTGTTCCGAGGGAAAGCTTTAAAGACTATATGAAATCTTACACTCCTTAACCTTTCTGGATTTCTCAGAAAATATCATTTAACTGATAGAGGAACGTGCCACTTGACGTTAAAAATGTCAGACGAATATCGTCTCTTTTGGTAAAATAGCAGTGAACAAATAAATGATTTGTTTGTCTCTTCAAAAATCAAAATCAAAGCAATGATTTACACGGTGCTATGTTTCTGCTGATGTTCCCGTCGACATGACTTCTTTTCATGTTGTCTATTGTTCTGTGGAATTTGTTCTCCAACTTTTTAAGTATGACGATGCTCTGAAGTTCTGTAGCATTTAAAGTCGACAAAATCGTTAATTTCTTACAGACAGACTGGGAGGGTGGTTTCTTTCCCCTTACACTCAACTTCAGTGAGGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGTTTCTTCCATCCTAACGTGTACCCGTCAGGAACGGTCTGCCTGTCAATTCTCAATGAAGATAGTGTGAGTAGTAAATTATAACTTATTGCTGTACGTTTATTGAGACGTCACCTGACCCATTCCTGAATTTTCTCCCTTCATGTGTAGGGGTGGAGACCAGCCATAACTGTTAAACAAATTCTTGTTGGGATCCAGGATTTGCTGGATCAACCAAATCCTGCTGATCCTGCTCAGACAGAAGGTTATCATCTCTTCATCCAGGTATCTCAATCACTAGATTCATTGTTCGTTTTGAATTTTGATCTATCTGACCACGTTATGTGCTTTATAATTTTTCTCCATAGGGCAGTGGAAAGTGCAATCCTTTCCCATGCTAAGTGTAATATGTAGTGGTATATACTCGGTGATAGAACACTAGTGAAGGGATTTGGTTCACAATTTTGTGTGAAGGGATGGGAATCAGAAGTTCACGTATTTAACACGTTCAATAGTTGGCCTCTGACCTGCTCACGAATGTGTAGTGTTTTAAAAGACTCATTTGTTGGTCAAGGGTGGGCAGTGTAGCAAAACGACAATGCAAAGAAGAAATCGGTTAATTATTTGATTGTCTGTTGTGTCTTCACCTTGATTATTTTAGTCATCAGTATTACCTCGACTCCACGATAATCAGTGCTCTTCTAGTATAATAATCATTACTGTTTAGTATTGCACATAAAATTTCTGAAATGGATTTTTCATGATGGCTGGCCCTATCTGCATGGTCCTCTGGGTTTGAACTGTGTAAAAATTGTTTTCCAGAGAAAATATCTCATGTATTCTTTGATATTAATTGTTTCTAGATTAGATACAACAAAAGAGGCATACAATAGGTGTGTTTCTAGATCAGCATGTGAACCTGGAAAGTGAGATATTGAGAATAGTTGCTTTTCAAAATGGAAAAACAAAGGGGTCTGGATCGATCCCGGATTTCGATGCCATGTCCCTAAGAAAGGCATTGGTTCCTACAACCAGATTTGAACCAAACTCTGTTCGAAGAGATTTCGAACTGCTAGACAGCAGTTGGTAG

mRNA sequence

TTGAATGATGAGGCCATGCCGAAGTGTCGAGACGCCATTTCGAGAATTGGCGTGATTCTCAAGCGACGTTTTCGAACTCCAAAGAAAAGAGATAAAGAAAAAAGAAAAGAGTAATCCCACAGATTCTGATTTGACTTTTGAATTTAATTTTCCCTCGATATTTATCCAAATTCAAAACCCGATTTTATGCTTCACTCATGAATCTCAGCCGTACGTTTGATTCAACTCCGACTCTCTGCGACTGCTCCACTACTTCTCTCTTCCTCCTATAAGTCTAGTGTGTCCGGCTGTTTCTCTCCTTCTTTCCTGTGGTGGGATCGCCGATTCAGGGGTCGAAGATTTGTTGATTTCTTGATACAGAGACCGACAGCCATGTCCGGTGGTATTGCACGAGGTCGTCTTGCGGAGGAGCGGAAGTCGTGGCGGAAGAATCATCCGCATGGTTTTGTTGCGAAACCGGAGACTATGCCTGATGGAACGGTCAATTTGATGATTTGGCATTGCATTATTCCTGGCAAAGTTGGGACAGACTGGGAGGGTGGTTTCTTTCCCCTTACACTCAACTTCAGTGAGGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGTTTCTTCCATCCTAACGTGTACCCGTCAGGAACGGTCTGCCTGTCAATTCTCAATGAAGATAGTGGGTGGAGACCAGCCATAACTGTTAAACAAATTCTTGTTGGGATCCAGGATTTGCTGGATCAACCAAATCCTGCTGATCCTGCTCAGACAGAAGGTTATCATCTCTTCATCCAGATACAACAAAAGAGGCATACAATAGGTGTGTTTCTAGATCAGCATGTGAACCTGGAAAGTGAGATATTGAGAATAGTTGCTTTTCAAAATGGAAAAACAAAGGGGTCTGGATCGATCCCGGATTTCGATGCCATGTCCCTAAGAAAGGCATTGGTTCCTACAACCAGATTTGAACCAAACTCTGTTCGAAGAGATTTCGAACTGCTAGACAGCAGTTGGTAG

Coding sequence (CDS)

ATGTCCGGTGGTATTGCACGAGGTCGTCTTGCGGAGGAGCGGAAGTCGTGGCGGAAGAATCATCCGCATGGTTTTGTTGCGAAACCGGAGACTATGCCTGATGGAACGGTCAATTTGATGATTTGGCATTGCATTATTCCTGGCAAAGTTGGGACAGACTGGGAGGGTGGTTTCTTTCCCCTTACACTCAACTTCAGTGAGGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGTTTCTTCCATCCTAACGTGTACCCGTCAGGAACGGTCTGCCTGTCAATTCTCAATGAAGATAGTGGGTGGAGACCAGCCATAACTGTTAAACAAATTCTTGTTGGGATCCAGGATTTGCTGGATCAACCAAATCCTGCTGATCCTGCTCAGACAGAAGGTTATCATCTCTTCATCCAGATACAACAAAAGAGGCATACAATAGGTGTGTTTCTAGATCAGCATGTGAACCTGGAAAGTGAGATATTGAGAATAGTTGCTTTTCAAAATGGAAAAACAAAGGGGTCTGGATCGATCCCGGATTTCGATGCCATGTCCCTAAGAAAGGCATTGGTTCCTACAACCAGATTTGAACCAAACTCTGTTCGAAGAGATTTCGAACTGCTAGACAGCAGTTGGTAG

Protein sequence

MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQIQQKRHTIGVFLDQHVNLESEILRIVAFQNGKTKGSGSIPDFDAMSLRKALVPTTRFEPNSVRRDFELLDSSW

Homology

[Close]

BLAST of CmoCh20G009760 vs. ExPASy Swiss-Prot
Match: Q42551 (SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana OX=3702 GN=SCE1 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-76
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           M+ GIARGRLAEERKSWRKNHPHGFVAKPET  DGTVNLM+WHC IPGK GTDWEGGFFP
Sbjct: 1   MASGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LT++FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNED GWRPAITVKQILVGIQDL
Sbjct: 61  LTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LD PNPADPAQT+GYHLF Q
Sbjct: 121 LDTPNPADPAQTDGYHLFCQ 140

[Close]

BLAST of CmoCh20G009760 vs. ExPASy Swiss-Prot
Match: Q9NGP4 (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum OX=44689 GN=ubc9 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-55
Identity = 88/136 (64.71%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 4   GIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTL 63
           GI+  RL+EERK+WR++HP+GF A+P T  DG++NL +W+C IPGK  T+WEGG +PL +
Sbjct: 3   GISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIM 62

Query: 64  NFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
            F+EDYPSKPPKCRFP+ FFHPNVYPSGTVCLSILNE++ W+P++T+K +L+GIQDLLD 
Sbjct: 63  EFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDN 122

Query: 124 PNPADPAQTEGYHLFI 140
           PNP  PAQ    HLF+
Sbjct: 123 PNPKSPAQQLPIHLFL 138

[Close]

BLAST of CmoCh20G009760 vs. ExPASy Swiss-Prot
Match: Q9DDJ0 (SUMO-conjugating enzyme UBC9-B OS=Danio rerio OX=7955 GN=ube2ib PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 92/137 (67.15%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 4   GIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTL 63
           GIA  RLA+ERK+WRK+HP GFVA P   PDGT+NLM W C IPGK GT WEGG F L +
Sbjct: 3   GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRM 62

Query: 64  NFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
            F +DYPS PPKC+F    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++
Sbjct: 63  LFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNE 122

Query: 124 PNPADPAQTEGYHLFIQ 141
           PN  DPAQ E Y ++ Q
Sbjct: 123 PNIQDPAQAEAYTIYCQ 139

[Close]

BLAST of CmoCh20G009760 vs. ExPASy Swiss-Prot
Match: P63283 (SUMO-conjugating enzyme UBC9 OS=Gallus gallus OX=9031 GN=UBE2I PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 92/137 (67.15%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 4   GIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTL 63
           GIA  RLA+ERK+WRK+HP GFVA P   PDGT+NLM W C IPGK GT WEGG F L +
Sbjct: 3   GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRM 62

Query: 64  NFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
            F +DYPS PPKC+F    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++
Sbjct: 63  LFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNE 122

Query: 124 PNPADPAQTEGYHLFIQ 141
           PN  DPAQ E Y ++ Q
Sbjct: 123 PNIQDPAQAEAYTIYCQ 139

[Close]

BLAST of CmoCh20G009760 vs. ExPASy Swiss-Prot
Match: P63279 (SUMO-conjugating enzyme UBC9 OS=Homo sapiens OX=9606 GN=UBE2I PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 92/137 (67.15%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 4   GIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTL 63
           GIA  RLA+ERK+WRK+HP GFVA P   PDGT+NLM W C IPGK GT WEGG F L +
Sbjct: 3   GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRM 62

Query: 64  NFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
            F +DYPS PPKC+F    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++
Sbjct: 63  LFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNE 122

Query: 124 PNPADPAQTEGYHLFIQ 141
           PN  DPAQ E Y ++ Q
Sbjct: 123 PNIQDPAQAEAYTIYCQ 139

[Close]

BLAST of CmoCh20G009760 vs. ExPASy TrEMBL
Match: A0A6J1JBQ4 (SUMO-conjugating enzyme SCE1 OS=Cucurbita maxima OX=3661 GN=LOC111484310 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. ExPASy TrEMBL
Match: A0A6J1FWS4 (SUMO-conjugating enzyme SCE1 OS=Cucurbita moschata OX=3662 GN=LOC111448928 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. ExPASy TrEMBL
Match: A0A0A0LNC3 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G428410 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. ExPASy TrEMBL
Match: A0A1S3CIC1 (SUMO-conjugating enzyme SCE1 OS=Cucumis melo OX=3656 GN=LOC103501112 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. ExPASy TrEMBL
Match: A0A6J1D5W4 (SUMO-conjugating enzyme SCE1 OS=Momordica charantia OX=3673 GN=LOC111017221 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPET+PDGTVNLMIWHCIIPGK GTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGTVNLMIWHCIIPGKAGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. NCBI nr
Match: KAE8652325.1 (hypothetical protein Csa_022640 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 4.0e-81
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP
Sbjct: 26  MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 85

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 86  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 145

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 146 LDQPNPADPAQTEGYHLFIQ 165

[Close]

BLAST of CmoCh20G009760 vs. NCBI nr
Match: XP_004151860.1 (SUMO-conjugating enzyme SCE1 [Cucumis sativus] >XP_008462833.1 PREDICTED: SUMO-conjugating enzyme SCE1 [Cucumis melo] >XP_022944484.1 SUMO-conjugating enzyme SCE1 [Cucurbita moschata] >XP_022944485.1 SUMO-conjugating enzyme SCE1 [Cucurbita moschata] >XP_022986625.1 SUMO-conjugating enzyme SCE1 [Cucurbita maxima] >XP_022986626.1 SUMO-conjugating enzyme SCE1 [Cucurbita maxima] >XP_023513172.1 SUMO-conjugating enzyme SCE1 [Cucurbita pepo subsp. pepo] >XP_023513173.1 SUMO-conjugating enzyme SCE1 [Cucurbita pepo subsp. pepo] >XP_038901077.1 SUMO-conjugating enzyme SCE1 isoform X1 [Benincasa hispida] >KAG6571228.1 SUMO-conjugating enzyme SCE1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011023.1 SUMO-conjugating enzyme SCE1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.0 bits (798), Expect = 4.0e-81
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. NCBI nr
Match: XP_022148601.1 (SUMO-conjugating enzyme SCE1 [Momordica charantia])

HSP 1 Score: 309.3 bits (791), Expect = 2.6e-80
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPET+PDGTVNLMIWHCIIPGK GTDWEGGFFP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETLPDGTVNLMIWHCIIPGKAGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. NCBI nr
Match: XP_022947364.1 (SUMO-conjugating enzyme SCE1-like [Cucurbita moschata] >XP_023006863.1 SUMO-conjugating enzyme SCE1-like [Cucurbita maxima] >XP_023534084.1 SUMO-conjugating enzyme SCE1-like [Cucurbita pepo subsp. pepo] >KAG6605179.1 SUMO-conjugating enzyme SCE1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035162.1 SUMO-conjugating enzyme SCE1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 3.4e-80
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRL EERKSWRKNHPHGFVAKPET+PDGTVNLM+WHCIIPGKVGTDWEGGFFP
Sbjct: 1   MSGGIARGRLTEERKSWRKNHPHGFVAKPETLPDGTVNLMVWHCIIPGKVGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. NCBI nr
Match: KAF9682373.1 (hypothetical protein SADUNF_Sadunf05G0102300 [Salix dunnii])

HSP 1 Score: 304.3 bits (778), Expect = 8.3e-79
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           MSGGIARGRLAEERKSWRKNHPHGFVAKPET PDGTVNLM+WHC IPGK+GTDWEGG+FP
Sbjct: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETQPDGTVNLMVWHCTIPGKLGTDWEGGYFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LTLNFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61  LTLNFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LDQPNPADPAQTEGYHLFIQ
Sbjct: 121 LDQPNPADPAQTEGYHLFIQ 140

[Close]

BLAST of CmoCh20G009760 vs. TAIR 10
Match: AT3G57870.1 (sumo conjugation enzyme 1 )

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MSGGIARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFP 60
           M+ GIARGRLAEERKSWRKNHPHGFVAKPET  DGTVNLM+WHC IPGK GTDWEGGFFP
Sbjct: 1   MASGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFP 60

Query: 61  LTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
           LT++FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNED GWRPAITVKQILVGIQDL
Sbjct: 61  LTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDL 120

Query: 121 LDQPNPADPAQTEGYHLFIQ 141
           LD PNPADPAQT+GYHLF Q
Sbjct: 121 LDTPNPADPAQTDGYHLFCQ 140

[Close]

BLAST of CmoCh20G009760 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 6   ARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTLNF 65
           AR RL  + K  +++ P G    P+       N+M+W+ +I G   T W+GG F L+L F
Sbjct: 5   ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLSLQF 64

Query: 66  SEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
           SEDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V  IL  IQ LL  PN
Sbjct: 65  SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPN 124

Query: 126 PADPAQTEGYHLFIQIQQK 145
           P  PA +E   +F + +++
Sbjct: 125 PNSPANSEAARMFSESKRE 136

[Close]

BLAST of CmoCh20G009760 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-26
Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 6   ARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTLNF 65
           AR RL  + K  +++ P G    P+       N+M+W+ +I G   T W+GG F L+L F
Sbjct: 5   ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLSLQF 64

Query: 66  SEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
           SEDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V  IL  IQ LL  PN
Sbjct: 65  SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPN 124

Query: 126 PADPAQTEGYHLFIQIQQK 145
           P  PA +E   ++ + +++
Sbjct: 125 PNSPANSEAARMYSESKRE 136

[Close]

BLAST of CmoCh20G009760 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-26
Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 6   ARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTLNF 65
           AR RL  + K  +++ P G    P+       N+M+W+ +I G   T W+GG F L+L F
Sbjct: 5   ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLSLQF 64

Query: 66  SEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
           SEDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V  IL  IQ LL  PN
Sbjct: 65  SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPN 124

Query: 126 PADPAQTEGYHLFIQIQQK 145
           P  PA +E   ++ + +++
Sbjct: 125 PNSPANSEAARMYSESKRE 136

[Close]

BLAST of CmoCh20G009760 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 57/133 (42.86%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 6   ARGRLAEERKSWRKNHPHGFVAKPETMPDGTVNLMIWHCIIPGKVGTDWEGGFFPLTLNF 65
           A+ RL  + K  +K+ P G    P+       N+M W+ +I G   T W+GG F LTL+F
Sbjct: 5   AKKRLMWDFKRLQKDPPVGISGAPQDN-----NIMHWNALIFGPEDTPWDGGTFKLTLHF 64

Query: 66  SEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
           +EDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V  +L  IQ LL  PN
Sbjct: 65  TEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAVLTSIQSLLCDPN 124

Query: 126 PADPAQTEGYHLF 139
           P  PA  E   LF
Sbjct: 125 PDSPANAEAARLF 130

The following BLAST results are available for this feature:

BLAST of CmoCh20G009760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42551	1.8e-76	90.00	SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana OX=3702 GN=SCE1 PE=1 SV=1	[more]
Q9NGP4	2.3e-55	64.71	Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum OX=44689 GN=ubc9 PE=3 S...	[more]
Q9DDJ0	1.6e-53	67.15	SUMO-conjugating enzyme UBC9-B OS=Danio rerio OX=7955 GN=ube2ib PE=1 SV=1	[more]
P63283	1.6e-53	67.15	SUMO-conjugating enzyme UBC9 OS=Gallus gallus OX=9031 GN=UBE2I PE=1 SV=1	[more]
P63279	1.6e-53	67.15	SUMO-conjugating enzyme UBC9 OS=Homo sapiens OX=9606 GN=UBE2I PE=1 SV=1	[more]

BLAST of CmoCh20G009760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBQ4	1.9e-81	100.00	SUMO-conjugating enzyme SCE1 OS=Cucurbita maxima OX=3661 GN=LOC111484310 PE=3 SV...	[more]
A0A6J1FWS4	1.9e-81	100.00	SUMO-conjugating enzyme SCE1 OS=Cucurbita moschata OX=3662 GN=LOC111448928 PE=3 ...	[more]
A0A0A0LNC3	1.9e-81	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G428410 PE...	[more]
A0A1S3CIC1	1.9e-81	100.00	SUMO-conjugating enzyme SCE1 OS=Cucumis melo OX=3656 GN=LOC103501112 PE=3 SV=1	[more]
A0A6J1D5W4	1.2e-80	98.57	SUMO-conjugating enzyme SCE1 OS=Momordica charantia OX=3673 GN=LOC111017221 PE=3...	[more]

BLAST of CmoCh20G009760 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652325.1	4.0e-81	100.00	hypothetical protein Csa_022640 [Cucumis sativus]	[more]
XP_004151860.1	4.0e-81	100.00	SUMO-conjugating enzyme SCE1 [Cucumis sativus] >XP_008462833.1 PREDICTED: SUMO-c...	[more]
XP_022148601.1	2.6e-80	98.57	SUMO-conjugating enzyme SCE1 [Momordica charantia]	[more]
XP_022947364.1	3.4e-80	97.86	SUMO-conjugating enzyme SCE1-like [Cucurbita moschata] >XP_023006863.1 SUMO-conj...	[more]
KAF9682373.1	8.3e-79	95.71	hypothetical protein SADUNF_Sadunf05G0102300 [Salix dunnii]	[more]

BLAST of CmoCh20G009760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57870.1	1.3e-77	90.00	sumo conjugation enzyme 1	[more]
AT2G02760.1	1.3e-26	41.01	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	3.0e-26	40.29	ubiquitin carrier protein 1	[more]
AT1G14400.2	3.0e-26	40.29	ubiquitin carrier protein 1	[more]
AT5G62540.1	1.1e-25	42.86	ubiquitin-conjugating enzyme 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 8..159 e-value: 7.5E-54 score: 194.9
None	No IPR available	PANTHER	PTHR24067:SF296	AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED	coord: 3..140
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..140
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 8.3E-53 score: 180.4
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 5..139
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 9..140 e-value: 2.1E-40 score: 137.6
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 5..157 score: 37.45718
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 9..144 e-value: 4.93576E-50 score: 157.364
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 83..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G009760.1	CmoCh20G009760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061656	SUMO conjugating enzyme activity