CmoCh20G009710 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G009710
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr20: 5392677 .. 5394980 (-)
RNA-Seq ExpressionCmoCh20G009710
SyntenyCmoCh20G009710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACTAAACATGAGGTTAACCCTTCACCAAGAGAAGGACCTAGGAAGACCTTGGCAAGAGAGACTAAGATCCCAAGAAACCAAAAAAGTCTCTTAGGAAAGGTGCAACCACTTTTTGTGATCAGGCCTACTTATAGAATCAAGAGAAAATCTCCTTTTCTATCTACTCAATCTCAGGGGGTTCCTCAACAATAAGCAATTTACTTGTTTCTTATGCCCTTTGTTTACAAAAGCATCACTTTGAGCCATGCTGAACAAAGTAGAGAGCTTGTTTCAATTGTGGTAGAAAGGGACACTTTGCAAGGTCGTGTCTGACCAAGGGTGAGCAAAATTCTCACAAGCCAACACCCAAAGCTATTTTAGCACGAACACAAGGAGGCTAGTAGAAAGCACATGTTTTTGCTCATAGAGGAAGCTGTGGGATATGCTAACATAGTTGCAACAGGAACACTACCCTAGACTCGTACCTTTTATTTGCTTCTCACCCACTGTATGTTTTGTTAATTTGTTACACTAGGACTATTCTTGGTCCTTAGTGTTCCATCTTTTGTTTTCTTGACGATTGTTTGTTAAGTGATCTTAGAGCTAGAGCTGTTTGGCTAATTTAGGTGTCCACACCAATCTGGCCAAAGGTTTAAGTTTAGGAGTGACTTGGTAAAGAAGAGATGAAATCAAGGCCAAGTGTTCAAAGTTATTAGACCTAGCAACTTTCACGGACGGCTATTTTTAAAGGTGGAGAGTTTGTAACGTCTCGCATTTCAGGAAAAAAAAGTGAAAGAAGAAGAATAGAAAAGAAAGAAAGAGAAGAAGAAATTGAAGAAGTGAAAGACAAAGAAAGGAGAAGAAGAGAAGAAAGAAAGAGAAATAGAAAGAGAAATGGAGGCGAGATGTAATGCGCTATGTTCTTCCCTAAGATTAATTTCTACTTTTGACATATATTTTGGATTAATTTAGTTCTTATTGGATTTGTTGGAGTTATTAATTTTGATAATTTAATTAAGTGAAGCTTGAAAAGTCCAAGTTATTTCTCCCCATGTTTGGAATATAGTGTAGCTTTGAGTTGTAGAAAAAGAAAAGGAAATGAAAAGGGAAGAAAAAAGGAAAATAAAAGAATGAGAAAAAAAAAGGAGCACAAGAAACAAAATCTGTTCTTCTTCCCGCATATTGCTGCCCCCAATGTCGTCTATTTGTTGCATTCCTCTCGTTCACTTGGGCCTGTATAGGACTCTGTCGATGAAATGTCCATATCCAGTTCATTCTTCAGAATCATATCACATTCTAGATCCGATGAAATAGGATGCATTGAGATGATATTTTATAAATACCTAATTGAGATGAACTGTCCATATGCAGTTCATCCATTGGAACCATATCACATTCCAAATAAAATATGATGGAATAGGATGAATTGAGATGGTATCTTGTTACTATTTCCTTGCTTTCCAATCGCCTGAAAGTAACAAAAGAACCATCTTGTTTTTCTTCATCAATTTTTGCTTGTTGTTCAGTGCGATGGTTTCGATCACTGCTCCATACGACTATTTTTATGCATTTCTCTTCCAGCGACCATGCAGCTGTTTTCATCTCTAATGATACCCTCGAGCTGAAGGACAGTGACAACGTGCTTTGGGTGACAATGACCCAAGTGTAATCTCTTAAGTGCATTTTCTTGGCTGTTCATCGATCCTTGGCCGTGACCTACACTCCAGACAATCCCAAATCAGATTGCCATAATGTTTAAAGTTCAGATCCGTGAGTTAGAATCTTTTCACCAACAAGAATCTGAACCCTTTGGTAAGAATCTAGTTACTATGAACTCTTTCGTATTTGATTGAAGTACACAAGATTAGCTTCTTGCCATTGGATCCCTTGAAGTTTAGGTTTGGATCGGCCATTTTGAGACATTAAGGACTATGTTAGGTAAGATTGAGTTAGCTACTCTCCTAAGTACTCCTTTGGGTTATTTAATAGTATTAAGTCTTGGGATTTGTTAAGGCTGGTTTTAATTTCAGAAATTTATATTAGGTTGATATGAGGACATTTGGCTGTGGCTTTTCTGTAAGTTGCTAACACAAGGTAAGTGATTCTTCTATCGGAATGCCTTAGTGCTAGGTTGAAAAAATGTATGATGTTTGAGACTCTTCAAATTGTTGAATGTTGAATGGTGATGTTGATGTAACTGTTACCTTGCGATATCTTTTTGTATTCTTTCTTATTATACAGTCTTTTGAGTGCTTATCTATTTTTGGTTTCATGTACTTGGACTTGATTAATCATATGGTGCAGGGTTGGGGAGATTAA

mRNA sequence

ATGTTGACTAAACATGAGGTTAACCCTTCACCAAGAGAAGGACCTAGGAAGACCTTGGCAAGAGAGACTAAGATCCCAAGAAACCAAAAAAGAAAAAAAAGTGAAAGAAGAAGAATAGAAAAGAAAGAAAGAGAAGAAGAAATTGAAGAAGTGAAAGACAAAGAAAGGAGAAGAAGAGAAGAAAGAAAGAGAAATAGAAAGAGAAATGGAGGCGAGATCGACCATGCAGCTGTTTTCATCTCTAATGATACCCTCGAGCTGAAGGACAGTGACAACGTGCTTTGGGTGACAATGACCCAATCTTTTGAGTGCTTATCTATTTTTGGTTTCATGTACTTGGACTTGATTAATCATATGGTGCAGGGTTGGGGAGATTAA

Coding sequence (CDS)

ATGTTGACTAAACATGAGGTTAACCCTTCACCAAGAGAAGGACCTAGGAAGACCTTGGCAAGAGAGACTAAGATCCCAAGAAACCAAAAAAGAAAAAAAAGTGAAAGAAGAAGAATAGAAAAGAAAGAAAGAGAAGAAGAAATTGAAGAAGTGAAAGACAAAGAAAGGAGAAGAAGAGAAGAAAGAAAGAGAAATAGAAAGAGAAATGGAGGCGAGATCGACCATGCAGCTGTTTTCATCTCTAATGATACCCTCGAGCTGAAGGACAGTGACAACGTGCTTTGGGTGACAATGACCCAATCTTTTGAGTGCTTATCTATTTTTGGTTTCATGTACTTGGACTTGATTAATCATATGGTGCAGGGTTGGGGAGATTAA

Protein sequence

MLTKHEVNPSPREGPRKTLARETKIPRNQKRKKSERRRIEKKEREEEIEEVKDKERRRREERKRNRKRNGGEIDHAAVFISNDTLELKDSDNVLWVTMTQSFECLSIFGFMYLDLINHMVQGWGD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G009710.1CmoCh20G009710.1mRNA