CmoCh20G009220 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATAAAGAATATTCTTATCCACATGTCTTTGTCCTTGCTCTTCATAAACTAGTTCGTCCTCTCATTTCTTATCATCTTTCTCTGTCTTCATCCACCAAACCCACACCTCAAAACTAAGAAGATGTTGGGTCAGCTCTCCCATGAGGCGGCAATCCAGGCATCAGCCACCGTCGTATGGCAGCTCTACGGAGGCCTCGAACTCGCACGATTGGTTGAAAACCGCCTCCCGAACCTTATCAAGAAAATAGAGGTGGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATATCATTTTCCAACCAAGTAATAATTTCTAATAATCTTCCTATTTTCTTGTTTTAAGCCTTTAGAGAATTTCATGACATTCTTCCATTCAATATTTCCCATGAGTTTATTCTATAACGAACATCTAAATTTGTTAAATTGATTATGTAATGGTCTAAGTCCACACCTATCAAATATTGTCTTATTTGAACTTTTCCTTTTAGACTTTTCCTCAAATTTATTAAAACGCCTCTGCTGCTAGGGAGAGGTTTCAACACCCTGATAAAGAATGTTTCGTTCTCTTTCCCAACTGATGTGGGATCTCATCATTCACCCCTCTTTAGGGTCCAGCGTCCTCGATGACACTCGTTCCTCTCTCTAATCGATGTGGAATCTCACAGATTAGGGATCAAATATGTTACGTGGAGTATGGATTCAGTGATATGAAAGTCTATGTATAAATGCAGGTTTAGGTGGTGCCCCAGGCTATAAGGAGAAATTCACAAAAATAGATAATGAGAATCGTATAAAAGAGACCGAAGTGGTGGAAGGAGGGTTCTTGGATATCGGGTTTACTCTCTATAGGGTTCGCTTGAAGATAGTTGAAAATGGTGATGATAGTTGCATTGTTGAATCCACCATTGAATATGATATCAAGGAAGAAGATGCTGCAAATGCCTCACTTGTTTCCATACAGCCTCTCATAGACATTGCTCAAGCAGCAAATGACCATCTACTTCACAACAAACAACATAAAAATGTTTAATTCATGAAATCCATTATTATCTTTACTCTTTTTTCTACAATAAACTCAATTTATTTCAGTTTCTTGTGATCTTGCATGTTCATGAACAAATGAGAAACGTTTTTAAATATTTGTTTTTATAGATAGTTAGTTTCCATGGTGATGTAACAAG TCATAAAGAATATTCTTATCCACATGTCTTTGTCCTTGCTCTTCATAAACTAGTTCGTCCTCTCATTTCTTATCATCTTTCTCTGTCTTCATCCACCAAACCCACACCTCAAAACTAAGAAGATGTTGGGTCAGCTCTCCCATGAGGCGGCAATCCAGGCATCAGCCACCGTCGTATGGCAGCTCTACGGAGGCCTCGAACTCGCACGATTGGTTGAAAACCGCCTCCCGAACCTTATCAAGAAAATAGAGGTGGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATATCATTTTCCAACCAAGTTTAGGTGGTGCCCCAGGCTATAAGGAGAAATTCACAAAAATAGATAATGAGAATCGTATAAAAGAGACCGAAGTGGTGGAAGGAGGGTTCTTGGATATCGGGTTTACTCTCTATAGGGTTCGCTTGAAGATAGTTGAAAATGGTGATGATAGTTGCATTGTTGAATCCACCATTGAATATGATATCAAGGAAGAAGATGCTGCAAATGCCTCACTTGTTTCCATACAGCCTCTCATAGACATTGCTCAAGCAGCAAATGACCATCTACTTCACAACAAACAACATAAAAATGTTTAATTCATGAAATCCATTATTATCTTTACTCTTTTTTCTACAATAAACTCAATTTATTTCAGTTTCTTGTGATCTTGCATGTTCATGAACAAATGAGAAACGTTTTTAAATATTTGTTTTTATAGATAGTTAGTTTCCATGGTGATGTAACAAG ATGTTGGGTCAGCTCTCCCATGAGGCGGCAATCCAGGCATCAGCCACCGTCGTATGGCAGCTCTACGGAGGCCTCGAACTCGCACGATTGGTTGAAAACCGCCTCCCGAACCTTATCAAGAAAATAGAGGTGGTTGAAGGTGATGGAGGAGAAGGAACTGTTCTTAATATCATTTTCCAACCAAGTTTAGGTGGTGCCCCAGGCTATAAGGAGAAATTCACAAAAATAGATAATGAGAATCGTATAAAAGAGACCGAAGTGGTGGAAGGAGGGTTCTTGGATATCGGGTTTACTCTCTATAGGGTTCGCTTGAAGATAGTTGAAAATGGTGATGATAGTTGCATTGTTGAATCCACCATTGAATATGATATCAAGGAAGAAGATGCTGCAAATGCCTCACTTGTTTCCATACAGCCTCTCATAGACATTGCTCAAGCAGCAAATGACCATCTACTTCACAACAAACAACATAAAAATGTTTAA MLGQLSHEAAIQASATVVWQLYGGLELARLVENRLPNLIKKIEVVEGDGGEGTVLNIIFQPSLGGAPGYKEKFTKIDNENRIKETEVVEGGFLDIGFTLYRVRLKIVENGDDSCIVESTIEYDIKEEDAANASLVSIQPLIDIAQAANDHLLHNKQHKNV Homology
BLAST of CmoCh20G009220 vs. ExPASy Swiss-Prot
Match: A0A3G5BB24 (Norbelladine synthase OS=Narcissus pseudonarcissus OX=39639 GN=NBS PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-35 Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy Swiss-Prot
Match: Q4QTJ2 (S-norcoclaurine synthase 1 OS=Papaver somniferum OX=3469 GN=NCS1 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.7e-27 Identity = 62/155 (40.00%), Postives = 103/155 (66.45%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy Swiss-Prot
Match: Q4QTJ1 (S-norcoclaurine synthase 2 OS=Papaver somniferum OX=3469 GN=NCS2 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.7e-26 Identity = 60/155 (38.71%), Postives = 102/155 (65.81%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy Swiss-Prot
Match: Q67A25 (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum OX=150095 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.9e-24 Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy Swiss-Prot
Match: A2A1A1 (S-norcoclaurine synthase 2 OS=Coptis japonica OX=3442 GN=PR10A PE=2 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20 Identity = 62/158 (39.24%), Postives = 91/158 (57.59%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy TrEMBL
Match: A0A6J1FUB4 (S-norcoclaurine synthase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448205 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 5.9e-83 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy TrEMBL
Match: A0A6J1FXT6 (S-norcoclaurine synthase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448206 PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72 Identity = 143/159 (89.94%), Postives = 149/159 (93.71%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy TrEMBL
Match: A0A6J1J835 (S-norcoclaurine synthase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484311 PE=3 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 3.6e-72 Identity = 143/159 (89.94%), Postives = 149/159 (93.71%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy TrEMBL
Match: A0A6J1FY33 (S-norcoclaurine synthase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448917 PE=3 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65 Identity = 130/159 (81.76%), Postives = 141/159 (88.68%), Query Frame = 0
BLAST of CmoCh20G009220 vs. ExPASy TrEMBL
Match: A0A6J1D5U1 (S-norcoclaurine synthase 2-like OS=Momordica charantia OX=3673 GN=LOC111017212 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 4.1e-60 Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0
BLAST of CmoCh20G009220 vs. NCBI nr
Match: XP_022943439.1 (S-norcoclaurine synthase 1-like [Cucurbita moschata]) HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh20G009220 vs. NCBI nr
Match: KAG6571179.1 (S-norcoclaurine synthase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 314.7 bits (805), Expect = 4.6e-82 Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0
BLAST of CmoCh20G009220 vs. NCBI nr
Match: XP_023522409.1 (S-norcoclaurine synthase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309.3 bits (791), Expect = 1.9e-80 Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0
BLAST of CmoCh20G009220 vs. NCBI nr
Match: XP_023512183.1 (S-norcoclaurine synthase 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 304.7 bits (779), Expect = 4.8e-79 Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 0
BLAST of CmoCh20G009220 vs. NCBI nr
Match: KAG7010987.1 (S-norcoclaurine synthase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295.4 bits (755), Expect = 2.9e-76 Identity = 153/160 (95.62%), Postives = 153/160 (95.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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