CmoCh20G008900 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G008900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
LocationCmo_Chr20: 4510512 .. 4514980 (-)
RNA-Seq ExpressionCmoCh20G008900
SyntenyCmoCh20G008900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTGATCCTCCATCTTTCTCTCTCCCTTGTCGCGCACACACAGCGGGTTGTTTTGGGTGCAGAGCTTTTTGCTAGAAATCAATGGAAATTGAATTAAGGGTCTGCTGAAATTTCCATGGAGAACTCTGTTACAGCCATAGTCGAGTCAGATGAACAGGAGGGAGCTCAATCGTTCAATGAAAGCTCTCCTGTAAGGAGGGCTGGCCTCTTCTACAAGCTGGTAGTGCCGTCCATTCTTCAAGACAAGAAGCTGGTAATCAGTCATTGGTGATACCGCTTGTATTTCGTTTTGTTTCTATGTGAATTTTGTTTTTGTTGTTCTTATGGGGAAAGGAAATGAACGGAATCCAGATTCGGTTCTAGGAAGTGAATGTAGACTGATTTTCATTTGCTTTGCTCACTCGATATGAGTGATCAATCGTTTCTTAGCTTTCTTTTTCTTGTCTGTTTGGATGGAGAGTGATGGATTCGTTAATTTAGATTGATTGTGAGAGAAATCGCCTCTTGTTGACTGCTGATTTTTGTATGAAATTTTCCGTGGTTGTCTCGTTGGATTGTTTTTCAAAAGCCAAATTCTGTTGCTGCATCGTGAGAGAGTGTGAAAGCGGTATTGATAAATAATTTGGAAGCTGATGAATGATCATCAATGATCAAGAACATGATTTTGGTTGCGAATAATCGGGGCTTATCTTTTGCAGCTTGCGTTTCTTGGCGTTGATTCATGTTTTCTTTTCTAATTGGTTTTGAATGATCAACTTTTTTCAAGCTCTATCTGTTCATGATGTACTGCGGGGACTCCTTGTTTCACTTTAGGCTAATGTGTGGCCAATTCATTGTACTAAATTCAATAGGCATTAAGATCAATTCAAAGTTAAAACTGCTGGAGTACAGTGTTTTGAAAGGGGTGAGAAAATCATTCTTCTATCCATTATTGCTTGGTTCTAACACTTTTGTTAAGTCATGATTGATACCTTTCATTAGAAATCCTGCAGATTGTGTTACTTTCTGTTTGTGTTATTGTTTGTTTAACGGATTAATTTGATGTATCCACAGAAAATACCAAATAAATTTGCAAAGAAGTTTGCAGATGATCTTTCTGATCTTGTTACTCTAGTTGTTCCGAATGGTCATCGATGGGTTCTGGAGTTAAAAAGACATGGCCGTAGTATGTGGTTTGAGGATGGTTGGCATGATTTTGTCAAACACCATTGCATTCAAGTTGGACAACTCTTGGTTTTCAGATTTGAAGGAAATTCCGTTTTCAACTTTTACATGTTCAACCTAACTGCTATTTCAAATGGTCCATGCAATACTTCAAATGCTTCCTCTGAACAAAACGATGGCGAACAATGTCCTGTTACACTTGGAAAAGAAGCTGAATACAAGAAATTAGTTGAGATATTTGGAACGAGTTCTCCGGATCCCTCTCCACGCCCTTCAGTGAAAAACACTTTGTGTGGTTTTTCAGATCAGCAGAAGTTCAATGGAAGTTGCAATGGGACTAGCATTAAGAACTTTATGCATTGGTTTGATACAGAGAACATGCATCCTCTAAAGGATTTAGATAAGTTGCAACTACTAAAGTCGAATCAAGATATTGGTATTCAATTCGACGGGGACGAGCTTGCAAAAGCTAGAGAGAATTTTGACTTTGAATTCTCTGATGAAACAAATGAAAGAGCCAGGAAAAAGAAGTTGAAAGTTGAACCAAGTAAGTTCTACAAATGCACTCTTTAACTCATTTGCAGATTCTCAGAAGTAAATTGGTTCTTTAACAACAAAATTCAATGTAGTTGACTACTACAATGACAATGAGCCCATAGTGGAAAAAAATAGCGAAAACATCCCACATAAAATTAGTAGGATGGCGTGTGGAGTCGAGGAGTTCAAGCCTGGTAATCCCTTTTGCTGGATTGTTATGAGGCAATCCTATGTTCGAAGAGGGTTCCATCTGGTAAGTCTTTTAGCTCTGCACTCCATTATGTGATTCTCAAGTAGATGGTACAAATGAAGTCTGTTTCATTATCGACAGCATATACCGTCCAAATTTGCTGAGAAGTATCTAAAAGGGGTCTCAGGCGACATCACACTTCAGGTTTCTAGTGGGAAGCAATGGCGTGTTCGATGCATTCGTGAAGGTCCTGGCACCAAGCTAACCAGGGGATGGGCTGACTTTGTTGTGGAGAATGATTTGAAAGAAGAAGACGTTTGTGTCTTTGAGCTGATTGATATAAAAGCTACTGCACTGAAAGTTACAATATTCCGAGTCCACGACGATCCAACAAAAACTTGAACCCGAGGTAATCTTTTTGCTGAATTTGACGTGCATCACATTATGTTTTCAAGGTTGGCTACTCTTTGTGCTGCATGCTTCATTAGATTCTAACTTGTAAATTTGAGCATAGTTATCTTGATGTTTACATATACCTGGAAAGTAGTTGAAATTATGCAAACCAAAGAGGAGACTATTTGTCTGAATGTCACCCAAATAGCTTATTAAATCTAGTACTTGTTGTTTGCTGATTCCTGTGAACTATTGCCACTGTTGATTATGAAGTAAATGGATTCTGGGTTTACATGAAGATTCTAAATCTCAATAGAATTTGGCTGGCTTGAAAATTTAGCTCTAATCATAGTTATGGAAATTAAGGGCTGTTTGTTAGGTTTCTGTTTCTTGTTCTTTTATTTTTTTTTCAAAAGAAAGAATATGAAAAATGTATTTGGTACTTGATTCTCATTTAGTAACCATTTTACTATTTCTCAAACTTTAAAATCAAAAATTTTTCTTGAAAATTGTTTTTTAGACCAAAAAGTATTCGATTTCATTGTGAAAAACGTTGGTCCTAGATAAGATAAAGTTAGAATTTAGTCCTATAGTTTAAAAGTTAGAATTTTCTTTATAGTCAGGATAAAGTAGTCCCTATAGATTAAAAGTTAGAATTTGCTCTATGGTTTGATAAAATCTGGTAGGGACTATTTATAAGGGTTTTATCAAATGATAGAAACTACTTATGAGGTTTTATCGAACCATAAGGATCAAATTTTAATGAACTTTCTCCCAATCATAGAGACCAAAAAGATAAACAATGTTTTTAGTTATCTTTGAATGATCATAAACAGAAAACAAAGGAACTATTTTCTTTACTTGCAATTTTGATAACGATTACACAAAATGATAAACGAGAAACATAGAACAGCTACTAAATGCATATATTTTTCTTAGAGCTAGAAATATGAAGGGAAAAGACCCTTTGAGACTGTGAGATCCCACGTCAATTGGAGAGGGGAATGAAACATTGTGTGCAAACCTCTTTTTATAGACTCGTTTTAAAACCGTGAGGCTGATAGCGATACATAATGGGCCAAAGCGGACAATATCTGCTAGTGATGGGTTTGGGCTGTTACAAATGGTATCAAAGCCAGACACCGAGTGGTGTTCCAGCAAGGATGTTGGAACCTCAATGAGATAGATTGTGAGATCCTACATTGGTTGGAGAGGAGAATAAAACATTCTTTATAAGGGTATAGAAACCTTTCCCTAGTAGACGCATTTTAAAACCGTGAGGCTGTCAGCGATACGTAACGGGCCAAAGTGAACATTATCTACTAGCAGTGGATTTGAGTTGCTACAAATGGTATGAGAGCCAGACACCGGGTGGTGTGCCAGCAAGGACATTGGTTCCCAAGGGGGTGAATTGTGAGATTCCACATTGGTTGGAGAGGAGAACCAAACACTCTTTACAAGGGTGTGGAAATCTCTCCTTAGTACATGCGTTTAAAACTGTGAGTTGACGACGATACGTAACGGACCAAAACGGACAATATCGGCTAGCGGCGAGTTTTGGCTGTTACAACGAGACTTCTTCTATAGAAACTATCTTCTCATTTGTCTCCTAACCTTTGTTTTTCCATCAATGATACATCCGACAACCTCATATCTGACATTACTGTCTGCATTTTACAGGAAATCATGGAAATATGTTGGAATTTTTCTCAAAAAACAGATGACAACAAGGTCTTGATTACACAACACCCTGTTGTTTCAGATTATCCTTGTAACCTTGTCAATGTTCACTTTTCGTCTTTATCATTTACAGCTTGTTTTCAAAGCATGAAGTTGAAGAGTGGTTGAACTTTGAAACTCCCATCTGTATATTCTTCCCTGAATGGAAAAGTTAAAAAGAGTTGGCTTTCTTTTCTCTGTAATGTATTGCCATGAACTCAAAAATTGTTGGAAGCTTACTGTTTCTCCCTTCCATCTGTAAATCACTTGTATTTTTCGACGTAGGGACTGGAGTGGCGGTGTGTGTGTGGTCGGAGTAGTTTTTCGATGGACCGTTTTGACCTAAGATGCATGACGGTTTAGTTTGGTTAGCGTGTCTGTGTCTGTGTCTAATGTGTGTTAGCACGATAGATATGTGTTTATACATTATTTGTATAAAGTTAATATCGATTCAACATTTGTCG

mRNA sequence

TTTTTGATCCTCCATCTTTCTCTCTCCCTTGTCGCGCACACACAGCGGGTTGTTTTGGGTGCAGAGCTTTTTGCTAGAAATCAATGGAAATTGAATTAAGGGTCTGCTGAAATTTCCATGGAGAACTCTGTTACAGCCATAGTCGAGTCAGATGAACAGGAGGGAGCTCAATCGTTCAATGAAAGCTCTCCTGTAAGGAGGGCTGGCCTCTTCTACAAGCTGGTAGTGCCGTCCATTCTTCAAGACAAGAAGCTGAAAATACCAAATAAATTTGCAAAGAAGTTTGCAGATGATCTTTCTGATCTTGTTACTCTAGTTGTTCCGAATGGTCATCGATGGGTTCTGGAGTTAAAAAGACATGGCCGTAGTATGTGGTTTGAGGATGGTTGGCATGATTTTGTCAAACACCATTGCATTCAAGTTGGACAACTCTTGGTTTTCAGATTTGAAGGAAATTCCGTTTTCAACTTTTACATGTTCAACCTAACTGCTATTTCAAATGGTCCATGCAATACTTCAAATGCTTCCTCTGAACAAAACGATGGCGAACAATGTCCTGTTACACTTGGAAAAGAAGCTGAATACAAGAAATTAGTTGAGATATTTGGAACGAGTTCTCCGGATCCCTCTCCACGCCCTTCAGTGAAAAACACTTTGTGTGGTTTTTCAGATCAGCAGAAGTTCAATGGAAGTTGCAATGGGACTAGCATTAAGAACTTTATGCATTGGTTTGATACAGAGAACATGCATCCTCTAAAGGATTTAGATAAGTTGCAACTACTAAAGTCGAATCAAGATATTGGTATTCAATTCGACGGGGACGAGCTTGCAAAAGCTAGAGAGAATTTTGACTTTGAATTCTCTGATGAAACAAATGAAAGAGCCAGGAAAAAGAAGTTGAAAGTTGAACCAATTGACTACTACAATGACAATGAGCCCATAGTGGAAAAAAATAGCGAAAACATCCCACATAAAATTAGTAGGATGGCGTGTGGAGTCGAGGAGTTCAAGCCTGGTAATCCCTTTTGCTGGATTGTTATGAGGCAATCCTATGTTCGAAGAGGGTTCCATCTGCATATACCGTCCAAATTTGCTGAGAAGTATCTAAAAGGGGTCTCAGGCGACATCACACTTCAGGTTTCTAGTGGGAAGCAATGGCGTGTTCGATGCATTCGTGAAGGTCCTGGCACCAAGCTAACCAGGGGATGGGCTGACTTTGTTGTGGAGAATGATTTGAAAGAAGAAGACGTTTGTGTCTTTGAGCTGATTGATATAAAAGCTACTGCACTGAAAGTTACAATATTCCGAGTCCACGACGATCCAACAAAAACTTGAACCCGAGGAAATCATGGAAATATGTTGGAATTTTTCTCAAAAAACAGATGACAACAAGCTTGTTTTCAAAGCATGAAGTTGAAGAGTGGTTGAACTTTGAAACTCCCATCTGTATATTCTTCCCTGAATGGAAAAGTTAAAAAGAGTTGGCTTTCTTTTCTCTGTAATGTATTGCCATGAACTCAAAAATTGTTGGAAGCTTACTGTTTCTCCCTTCCATCTGTAAATCACTTGTATTTTTCGACGTAGGGACTGGAGTGGCGGTGTGTGTGTGGTCGGAGTAGTTTTTCGATGGACCGTTTTGACCTAAGATGCATGACGGTTTAGTTTGGTTAGCGTGTCTGTGTCTGTGTCTAATGTGTGTTAGCACGATAGATATGTGTTTATACATTATTTGTATAAAGTTAATATCGATTCAACATTTGTCG

Coding sequence (CDS)

ATGGAGAACTCTGTTACAGCCATAGTCGAGTCAGATGAACAGGAGGGAGCTCAATCGTTCAATGAAAGCTCTCCTGTAAGGAGGGCTGGCCTCTTCTACAAGCTGGTAGTGCCGTCCATTCTTCAAGACAAGAAGCTGAAAATACCAAATAAATTTGCAAAGAAGTTTGCAGATGATCTTTCTGATCTTGTTACTCTAGTTGTTCCGAATGGTCATCGATGGGTTCTGGAGTTAAAAAGACATGGCCGTAGTATGTGGTTTGAGGATGGTTGGCATGATTTTGTCAAACACCATTGCATTCAAGTTGGACAACTCTTGGTTTTCAGATTTGAAGGAAATTCCGTTTTCAACTTTTACATGTTCAACCTAACTGCTATTTCAAATGGTCCATGCAATACTTCAAATGCTTCCTCTGAACAAAACGATGGCGAACAATGTCCTGTTACACTTGGAAAAGAAGCTGAATACAAGAAATTAGTTGAGATATTTGGAACGAGTTCTCCGGATCCCTCTCCACGCCCTTCAGTGAAAAACACTTTGTGTGGTTTTTCAGATCAGCAGAAGTTCAATGGAAGTTGCAATGGGACTAGCATTAAGAACTTTATGCATTGGTTTGATACAGAGAACATGCATCCTCTAAAGGATTTAGATAAGTTGCAACTACTAAAGTCGAATCAAGATATTGGTATTCAATTCGACGGGGACGAGCTTGCAAAAGCTAGAGAGAATTTTGACTTTGAATTCTCTGATGAAACAAATGAAAGAGCCAGGAAAAAGAAGTTGAAAGTTGAACCAATTGACTACTACAATGACAATGAGCCCATAGTGGAAAAAAATAGCGAAAACATCCCACATAAAATTAGTAGGATGGCGTGTGGAGTCGAGGAGTTCAAGCCTGGTAATCCCTTTTGCTGGATTGTTATGAGGCAATCCTATGTTCGAAGAGGGTTCCATCTGCATATACCGTCCAAATTTGCTGAGAAGTATCTAAAAGGGGTCTCAGGCGACATCACACTTCAGGTTTCTAGTGGGAAGCAATGGCGTGTTCGATGCATTCGTGAAGGTCCTGGCACCAAGCTAACCAGGGGATGGGCTGACTTTGTTGTGGAGAATGATTTGAAAGAAGAAGACGTTTGTGTCTTTGAGCTGATTGATATAAAAGCTACTGCACTGAAAGTTACAATATTCCGAGTCCACGACGATCCAACAAAAACTTGA

Protein sequence

MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTLCGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKARENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Homology
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BLAST of CmoCh20G008900 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.4e-48
Identity = 126/370 (34.05%), Postives = 188/370 (50.81%), Query Frame = 0 

Query: 32  FYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGRSMWFEDGW 91
           F+KL+  S +Q+K+L++P+KF  KF D+LS  V L VP+GH W + L++    +WF+DGW
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGW 65

Query: 92  HDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTAISNGPCNTSNASSEQNDGEQCPVTLG 151
            +FV  + I++G LL+FR+EGNS F+ Y+FNL+       +T    S  N  ++  +   
Sbjct: 66  QEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFED 125

Query: 152 KEAEYKKLVEIFGTSSPDPSPRPSVKNTLCGFSDQQKFNGSCNGTSIKNFMHWFDTENMH 211
            E E     E+   SS  PSP P         S      G  +      F      E   
Sbjct: 126 LEDED---AEVIFPSSVYPSPLPE--------STVPANKGYASSAIQTLFTGPVKAEEPT 185

Query: 212 PLKDLDKLQLLKSNQDIGIQFDGDEL-AKARENFDFEFSDETNERARKKKLKVEPIDYYN 271
           P   + K +  K         D +E+ + A  + D E   +  E A  +K  V       
Sbjct: 186 PTPKIPKKRGRKKK-----NADPEEINSSAPRDDDPENRSKFYESASARKRTV------- 245

Query: 272 DNEPIVEKNSENIPHKISRMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYL 331
                          +  R     + F+P NPF  +V+R SY+ RG  +++PS FAEKYL
Sbjct: 246 ------------TAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYL 305

Query: 332 KGVSGDITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATA 391
            G+SG I +Q++  KQW VRC+ +    K ++GW +F +EN+L E DVCVFEL+  +   
Sbjct: 306 SGISGFIKVQLAE-KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFV 339

Query: 392 LKVTIFRVHD 401
           LKVT FRV++
Sbjct: 366 LKVTAFRVNE 339

[Close]
BLAST of CmoCh20G008900 vs. ExPASy Swiss-Prot
Match: Q2R9D2 (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.6e-23
Identity = 95/375 (25.33%), Postives = 156/375 (41.60%), Query Frame = 0 

Query: 44  KKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVG 103
           +++KIP+ F +   +  + +V+LV  +G++W  EL       +F  GW +FV+ + IQ G
Sbjct: 43  ERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCG 102

Query: 104 QLLVFRFEGNSVFNFYMF------NLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYK 163
           Q LVF ++  S F+  +F       ++  S  P       +E ++G      +  E    
Sbjct: 103 QFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMAP 162

Query: 164 KLVE---IFGTSSPDPSP---------RPSVKNTLCGFSDQQKFNGSCNGTSIKNFMHWF 223
            L E   I G  + D            + S +  +C  S +++   S   + + +  H  
Sbjct: 163 ALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSH-N 222

Query: 224 DTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKARENFDFEFSDETNERARKKKLKVEP 283
            T       D D       N    ++F                S E + R R        
Sbjct: 223 STRGSSCSSDEDNSSSKSPNPPFLMRF---------------LSGEVSRRGRCVSKGQRQ 282

Query: 284 IDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKF 343
           +   +   P+ E   +   H + R      EFK  NPF   +M +SYV  GF ++IP +F
Sbjct: 283 LTVISQRRPVTEAEKD---HALQR----AREFKSKNPFAVQIMMESYVYVGFFMNIPCEF 342

Query: 344 AEKYLKGVSGDITLQVSSGKQWRVRCIREGPGT--KLTRGWADFVVENDLKEEDVCVFEL 399
             + L   +  ITL    GK W V  +     +    + GW  F V N+L++ DVCVFEL
Sbjct: 343 VRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFEL 392

[Close]
BLAST of CmoCh20G008900 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-22
Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 0 

Query: 289 RMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWR 348
           R     + F+P NP+  +V+R SY+ RG  +++PS FAEKYL G+SG I LQ+   KQW 
Sbjct: 114 RAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWP 173

Query: 349 VRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHD 401
           VRC+ +    K ++GW +F +EN++ E DVCVFEL+  +   L+VT FRV++
Sbjct: 174 VRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224

[Close]
BLAST of CmoCh20G008900 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.2e-18
Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 24  SPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGR 83
           SPV++   F+KLV+PS ++DK ++IP +F K     LS++VTLV P G++  ++LKR G 
Sbjct: 25  SPVKK---FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGE 84

Query: 84  SMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTAI-SNGPCNTSNASSEQND 143
            +WF +GW +F + H I+ G  L+F ++ NS F   +FN +A  +N P +  +     +D
Sbjct: 85  EIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDD 141

[Close]
BLAST of CmoCh20G008900 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-18
Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 0 

Query: 24  SPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGR 83
           SPV++   F+KLV+PS ++DK +KIP +F K     LS++VTL  P G +  ++LKR G 
Sbjct: 25  SPVKK---FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGE 84

Query: 84  SMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTA 126
            +WF +GW +F + H I+ G  L+F ++ NS F   +FN++A
Sbjct: 85  EIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSA 123

[Close]
BLAST of CmoCh20G008900 vs. ExPASy TrEMBL
Match: A0A6J1FWS9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111448934 PE=4 SV=1)

HSP 1 Score: 837.8 bits (2163), Expect = 1.9e-239
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL
Sbjct: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL
Sbjct: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240
           CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA
Sbjct: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240

Query: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300
           RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG
Sbjct: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300

Query: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360
           NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL
Sbjct: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360

Query: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Sbjct: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 405

[Close]
BLAST of CmoCh20G008900 vs. ExPASy TrEMBL
Match: A0A6J1JBG7 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111484257 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 9.8e-236
Identity = 399/405 (98.52%), Postives = 401/405 (99.01%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL
Sbjct: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKN L
Sbjct: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNAL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240
           CGFSDQQKFNGSCNG SIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA
Sbjct: 181 CGFSDQQKFNGSCNGISIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240

Query: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300
           REN DF+FSDE+NERARKKKLKVEPIDYYNDNE IVEKNSENIPHKISRMACGVEEFKPG
Sbjct: 241 RENLDFQFSDESNERARKKKLKVEPIDYYNDNEAIVEKNSENIPHKISRMACGVEEFKPG 300

Query: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360
           NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL
Sbjct: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360

Query: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Sbjct: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 405

[Close]
BLAST of CmoCh20G008900 vs. ExPASy TrEMBL
Match: A0A0A0LP18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237700 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.1e-202
Identity = 346/417 (82.97%), Postives = 372/417 (89.21%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           M+NS+TA+ ES+EQEGAQSFN++SP RRAGLFYKLVVPSILQDKKLKIPNKFAKKF  D+
Sbjct: 1   MDNSLTAMPESNEQEGAQSFNQTSPARRAGLFYKLVVPSILQDKKLKIPNKFAKKFGGDI 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
            DLVTLV PNG+RWVLELKRHGRSMWFEDGWH+FVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  LDLVTLVAPNGYRWVLELKRHGRSMWFEDGWHEFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAI NGPCNTSNAS EQNDGEQCP TLGKEAEYKKLVEI GT SPDPSPRPSVK+ +
Sbjct: 121 FNLTAIPNGPCNTSNASIEQNDGEQCPDTLGKEAEYKKLVEILGTGSPDPSPRPSVKDLV 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLD---------KLQLLKSNQDIGIQ 240
           C F DQQKFNGSCNGTSIKNFMHWFDTEN+HPLKD D         ++QLL SN+DIGIQ
Sbjct: 181 CEFPDQQKFNGSCNGTSIKNFMHWFDTENLHPLKDFDNPLKHLDKLRMQLLNSNRDIGIQ 240

Query: 241 FDGDELAKARENFDFEF---SDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKIS 300
           FDGDELAKAREN DF+    SDE  E A KKKLK+EPIDYYNDNEPI EK   N+PHKI+
Sbjct: 241 FDGDELAKARENHDFQLNQSSDEREEGAMKKKLKLEPIDYYNDNEPIDEKKCGNVPHKIN 300

Query: 301 RMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWR 360
           RMA GVEEFK GNPFCWIVMRQSY+RRGFHLHIPSKFAEKYLKGV GDITLQVSSGKQWR
Sbjct: 301 RMAFGVEEFKFGNPFCWIVMRQSYIRRGFHLHIPSKFAEKYLKGVWGDITLQVSSGKQWR 360

Query: 361 VRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           VRCIREGPGTKLTRGWADFVV+NDLKEEDVCVFELI++K   ++VT+FRVH DPTKT
Sbjct: 361 VRCIREGPGTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTVFRVHGDPTKT 417

[Close]
BLAST of CmoCh20G008900 vs. ExPASy TrEMBL
Match: A0A5D3CT33 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00910 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 349/417 (83.69%), Postives = 370/417 (88.73%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENS+TA+ ES++QEGAQSF+ESSP RRAGLFYKLVVPSILQDKKLKIPNKFAKKF  DL
Sbjct: 1   MENSLTAMPESNDQEGAQSFSESSPARRAGLFYKLVVPSILQDKKLKIPNKFAKKFGGDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
            DLVTLV PNG+RWVLELKRHGRSMWFEDGWH+FV+HHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  LDLVTLVAPNGYRWVLELKRHGRSMWFEDGWHEFVEHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAI NGPCNTSNAS EQNDGE CP TLGKEAEYKKLVEI GT SPDPSPRPSVKN L
Sbjct: 121 FNLTAIPNGPCNTSNASIEQNDGEPCPDTLGKEAEYKKLVEILGTGSPDPSPRPSVKNVL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLD---------KLQLLKSNQDIGIQ 240
           C F DQQKFNGSCNGTSIKNFMHWFDTEN+HPLKD D         +LQLL SN+DIGIQ
Sbjct: 181 CEFPDQQKFNGSCNGTSIKNFMHWFDTENLHPLKDFDNPLKHLDKLRLQLLNSNRDIGIQ 240

Query: 241 FDGDELAKARENFDFEF---SDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKIS 300
           FDGDE AKAREN DF+    SDE  E A KKKLK+EPIDYYNDNEPI EK   NIPHKI+
Sbjct: 241 FDGDEHAKARENHDFQLNQSSDEREEGAMKKKLKLEPIDYYNDNEPIDEKKCGNIPHKIN 300

Query: 301 RMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWR 360
           RMA GVEEFK GNPFCWIVMRQSY+RRGFHLHIPSKFAEKYLKGV GDITLQVSSGKQWR
Sbjct: 301 RMAFGVEEFKVGNPFCWIVMRQSYIRRGFHLHIPSKFAEKYLKGVWGDITLQVSSGKQWR 360

Query: 361 VRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           VRCIREGPGTKLTRGWADFVV+N+LKEEDVCVFELI++K   L+VT+FRVH DPTKT
Sbjct: 361 VRCIREGPGTKLTRGWADFVVDNELKEEDVCVFELINMKDIVLQVTVFRVHGDPTKT 417

[Close]
BLAST of CmoCh20G008900 vs. ExPASy TrEMBL
Match: A0A1S3C9Q5 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103498421 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 349/417 (83.69%), Postives = 370/417 (88.73%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENS+TA+ ES++QEGAQSF+ESSP RRAGLFYKLVVPSILQDKKLKIPNKFAKKF  DL
Sbjct: 1   MENSLTAMPESNDQEGAQSFSESSPARRAGLFYKLVVPSILQDKKLKIPNKFAKKFGGDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
            DLVTLV PNG+RWVLELKRHGRSMWFEDGWH+FV+HHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  LDLVTLVAPNGYRWVLELKRHGRSMWFEDGWHEFVEHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAI NGPCNTSNAS EQNDGE CP TLGKEAEYKKLVEI GT SPDPSPRPSVKN L
Sbjct: 121 FNLTAIPNGPCNTSNASIEQNDGEPCPDTLGKEAEYKKLVEILGTGSPDPSPRPSVKNVL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLD---------KLQLLKSNQDIGIQ 240
           C F DQQKFNGSCNGTSIKNFMHWFDTEN+HPLKD D         +LQLL SN+DIGIQ
Sbjct: 181 CEFPDQQKFNGSCNGTSIKNFMHWFDTENLHPLKDFDNPLKHLDKLRLQLLNSNRDIGIQ 240

Query: 241 FDGDELAKARENFDFEF---SDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKIS 300
           FDGDE AKAREN DF+    SDE  E A KKKLK+EPIDYYNDNEPI EK   NIPHKI+
Sbjct: 241 FDGDEHAKARENHDFQLNQSSDEREEGAMKKKLKLEPIDYYNDNEPIDEKKCGNIPHKIN 300

Query: 301 RMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWR 360
           RMA GVEEFK GNPFCWIVMRQSY+RRGFHLHIPSKFAEKYLKGV GDITLQVSSGKQWR
Sbjct: 301 RMAFGVEEFKVGNPFCWIVMRQSYIRRGFHLHIPSKFAEKYLKGVWGDITLQVSSGKQWR 360

Query: 361 VRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           VRCIREGPGTKLTRGWADFVV+N+LKEEDVCVFELI++K   L+VT+FRVH DPTKT
Sbjct: 361 VRCIREGPGTKLTRGWADFVVDNELKEEDVCVFELINMKDIVLQVTVFRVHGDPTKT 417

[Close]
BLAST of CmoCh20G008900 vs. NCBI nr
Match: XP_022944492.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita moschata] >XP_022944493.1 B3 domain-containing transcription factor VRN1-like [Cucurbita moschata] >XP_022944494.1 B3 domain-containing transcription factor VRN1-like [Cucurbita moschata])

HSP 1 Score: 837.8 bits (2163), Expect = 4.0e-239
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL
Sbjct: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL
Sbjct: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240
           CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA
Sbjct: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240

Query: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300
           RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG
Sbjct: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300

Query: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360
           NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL
Sbjct: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360

Query: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Sbjct: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 405

[Close]
BLAST of CmoCh20G008900 vs. NCBI nr
Match: KAG7010957.1 (B3 domain-containing transcription factor VRN1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 833.2 bits (2151), Expect = 9.8e-238
Identity = 403/405 (99.51%), Postives = 403/405 (99.51%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENSVTAIVESDEQEGAQSFN SSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL
Sbjct: 1   MENSVTAIVESDEQEGAQSFNGSSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKN L
Sbjct: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNAL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240
           CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA
Sbjct: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240

Query: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300
           RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG
Sbjct: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300

Query: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360
           NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL
Sbjct: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360

Query: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Sbjct: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 405

[Close]
BLAST of CmoCh20G008900 vs. NCBI nr
Match: XP_023512931.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 827.0 bits (2135), Expect = 7.0e-236
Identity = 399/405 (98.52%), Postives = 402/405 (99.26%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENSVTAIVESDEQEGAQSFNESSPV+RAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL
Sbjct: 1   MENSVTAIVESDEQEGAQSFNESSPVKRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKN L
Sbjct: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNAL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240
           CGFSDQQKFNGSCNGTSIKNFMHWFDTEN+HPLKDLDKLQLLKSNQDIGIQFDGDELAKA
Sbjct: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENVHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240

Query: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300
           RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVE+N  NIPHKISRMACGVEEFKPG
Sbjct: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEENCGNIPHKISRMACGVEEFKPG 300

Query: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360
           NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL
Sbjct: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360

Query: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Sbjct: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 405

[Close]
BLAST of CmoCh20G008900 vs. NCBI nr
Match: XP_022986551.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita maxima] >XP_022986552.1 B3 domain-containing transcription factor VRN1-like [Cucurbita maxima])

HSP 1 Score: 825.5 bits (2131), Expect = 2.0e-235
Identity = 399/405 (98.52%), Postives = 401/405 (99.01%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL
Sbjct: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKN L
Sbjct: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNAL 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240
           CGFSDQQKFNGSCNG SIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA
Sbjct: 181 CGFSDQQKFNGSCNGISIKNFMHWFDTENMHPLKDLDKLQLLKSNQDIGIQFDGDELAKA 240

Query: 241 RENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMACGVEEFKPG 300
           REN DF+FSDE+NERARKKKLKVEPIDYYNDNE IVEKNSENIPHKISRMACGVEEFKPG
Sbjct: 241 RENLDFQFSDESNERARKKKLKVEPIDYYNDNEAIVEKNSENIPHKISRMACGVEEFKPG 300

Query: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360
           NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL
Sbjct: 301 NPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRCIREGPGTKL 360

Query: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT
Sbjct: 361 TRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 405

[Close]
BLAST of CmoCh20G008900 vs. NCBI nr
Match: XP_038902617.1 (uncharacterized protein LOC120089271 [Benincasa hispida])

HSP 1 Score: 744.6 bits (1921), Expect = 4.6e-211
Identity = 363/414 (87.68%), Postives = 378/414 (91.30%), Query Frame = 0 

Query: 1   MENSVTAIVESDEQEGAQSFNESSPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDL 60
           MENS+TA+ ES+EQ+GAQSFNESSP RRAGLFYKLVVPSILQDKKLKIPNKFAKKF DDL
Sbjct: 1   MENSLTAMAESNEQDGAQSFNESSPARRAGLFYKLVVPSILQDKKLKIPNKFAKKFGDDL 60

Query: 61  SDLVTLVVPNGHRWVLELKRHGRSMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120
           SDLVTLVVPNG+RWVLELKRHGRS+WFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM
Sbjct: 61  SDLVTLVVPNGYRWVLELKRHGRSLWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYM 120

Query: 121 FNLTAISNGPCNTSNASSEQNDGEQCPVTLGKEAEYKKLVEIFGTSSPDPSPRPSVKNTL 180
           FNLTA  NGPC+ SN   EQNDGEQCPVTLGKEAEYKKLVEIFGTSSP PSPRPSVKNT 
Sbjct: 121 FNLTATPNGPCDPSN---EQNDGEQCPVTLGKEAEYKKLVEIFGTSSPAPSPRPSVKNTF 180

Query: 181 CGFSDQQKFNGSCNGTSIKNFMHWFDTENMHPLKDLD---------KLQLLKSNQDIGIQ 240
           C F DQQKFNGSCNGTSIKNFMHWFDTEN+HPLKD D         +LQLL SN+DIGIQ
Sbjct: 181 CEFPDQQKFNGSCNGTSIKNFMHWFDTENLHPLKDFDNPLKDLDKLRLQLLNSNRDIGIQ 240

Query: 241 FDGDELAKARENFDFEFSDETNERARKKKLKVEPIDYYNDNEPIVEKNSENIPHKISRMA 300
           FDGDELAKAREN DF+FSDE  E ARKKKLKVEPIDYYNDNEPIVEK   NIPHKISRMA
Sbjct: 241 FDGDELAKARENLDFQFSDEREEGARKKKLKVEPIDYYNDNEPIVEKKCGNIPHKISRMA 300

Query: 301 CGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWRVRC 360
            GVEEFK GNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSG+ITLQVSSGKQWRVRC
Sbjct: 301 FGVEEFKFGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGEITLQVSSGKQWRVRC 360

Query: 361 IREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHDDPTKT 406
           IREGPGTKLTRGWADFVV+NDLKEEDVCVFELIDIK   LKVT+FRVHD+PTKT
Sbjct: 361 IREGPGTKLTRGWADFVVDNDLKEEDVCVFELIDIKDIVLKVTVFRVHDNPTKT 411

[Close]
BLAST of CmoCh20G008900 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 195.3 bits (495), Expect = 9.6e-50
Identity = 126/370 (34.05%), Postives = 188/370 (50.81%), Query Frame = 0 

Query: 32  FYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGRSMWFEDGW 91
           F+KL+  S +Q+K+L++P+KF  KF D+LS  V L VP+GH W + L++    +WF+DGW
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGW 65

Query: 92  HDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTAISNGPCNTSNASSEQNDGEQCPVTLG 151
            +FV  + I++G LL+FR+EGNS F+ Y+FNL+       +T    S  N  ++  +   
Sbjct: 66  QEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFED 125

Query: 152 KEAEYKKLVEIFGTSSPDPSPRPSVKNTLCGFSDQQKFNGSCNGTSIKNFMHWFDTENMH 211
            E E     E+   SS  PSP P         S      G  +      F      E   
Sbjct: 126 LEDED---AEVIFPSSVYPSPLPE--------STVPANKGYASSAIQTLFTGPVKAEEPT 185

Query: 212 PLKDLDKLQLLKSNQDIGIQFDGDEL-AKARENFDFEFSDETNERARKKKLKVEPIDYYN 271
           P   + K +  K         D +E+ + A  + D E   +  E A  +K  V       
Sbjct: 186 PTPKIPKKRGRKKK-----NADPEEINSSAPRDDDPENRSKFYESASARKRTV------- 245

Query: 272 DNEPIVEKNSENIPHKISRMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYL 331
                          +  R     + F+P NPF  +V+R SY+ RG  +++PS FAEKYL
Sbjct: 246 ------------TAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYL 305

Query: 332 KGVSGDITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATA 391
            G+SG I +Q++  KQW VRC+ +    K ++GW +F +EN+L E DVCVFEL+  +   
Sbjct: 306 SGISGFIKVQLAE-KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFV 339

Query: 392 LKVTIFRVHD 401
           LKVT FRV++
Sbjct: 366 LKVTAFRVNE 339

[Close]
BLAST of CmoCh20G008900 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 109.0 bits (271), Expect = 9.1e-24
Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 0 

Query: 289 RMACGVEEFKPGNPFCWIVMRQSYVRRGFHLHIPSKFAEKYLKGVSGDITLQVSSGKQWR 348
           R     + F+P NP+  +V+R SY+ RG  +++PS FAEKYL G+SG I LQ+   KQW 
Sbjct: 114 RAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWP 173

Query: 349 VRCIREGPGTKLTRGWADFVVENDLKEEDVCVFELIDIKATALKVTIFRVHD 401
           VRC+ +    K ++GW +F +EN++ E DVCVFEL+  +   L+VT FRV++
Sbjct: 174 VRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224

[Close]
BLAST of CmoCh20G008900 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 94.0 bits (232), Expect = 3.0e-19
Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 24  SPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGR 83
           SPV++   F+KLV+PS ++DK ++IP +F K     LS++VTLV P G++  ++LKR G 
Sbjct: 25  SPVKK---FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGE 84

Query: 84  SMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTAI-SNGPCNTSNASSEQND 143
            +WF +GW +F + H I+ G  L+F ++ NS F   +FN +A  +N P +  +     +D
Sbjct: 85  EIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDD 141

[Close]
BLAST of CmoCh20G008900 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 93.6 bits (231), Expect = 3.9e-19
Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 0 

Query: 24  SPVRRAGLFYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGR 83
           SPV++   F+KLV+PS ++DK +KIP +F K     LS++VTL  P G +  ++LKR G 
Sbjct: 25  SPVKK---FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGE 84

Query: 84  SMWFEDGWHDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTA 126
            +WF +GW +F + H I+ G  L+F ++ NS F   +FN++A
Sbjct: 85  EIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSA 123

[Close]
BLAST of CmoCh20G008900 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-13
Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 0 

Query: 32  FYKLVVPSILQDKKLKIPNKFAKKFADDLSDLVTLVVPNGHRWVLELKRHGRSMWFEDGW 91
           F K+++ S + +K +K+P +F  +F   L+D VTL  P G +  + +KR G  +WFE GW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 93

Query: 92  HDFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTA 126
            +F + H +  G  L F +EG+S F   +F+++A
Sbjct: 94  SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSA 126

The following BLAST results are available for this feature:
BLAST of CmoCh20G008900 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L3W11.4e-4834.05B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G... [more]
Q2R9D22.6e-2325.33B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=399... [more]
Q9XIB51.3e-2245.54B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1... [more]
Q9ZSH74.2e-1838.33B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01... [more]
Q84R275.5e-1842.16B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18... [more]
BLAST of CmoCh20G008900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FWS91.9e-239100.00B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=366... [more]
A0A6J1JBG79.8e-23698.52B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ... [more]
A0A0A0LP181.1e-20282.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237700 PE=4 SV=1[more]
A0A5D3CT331.9e-20283.69B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ... [more]
A0A1S3C9Q51.9e-20283.69B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L... [more]
BLAST of CmoCh20G008900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944492.14.0e-239100.00B3 domain-containing transcription factor VRN1-like [Cucurbita moschata] >XP_022... [more]
KAG7010957.19.8e-23899.51B3 domain-containing transcription factor VRN1 [Cucurbita argyrosperma subsp. ar... [more]
XP_023512931.17.0e-23698.52B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo][more]
XP_022986551.12.0e-23598.52B3 domain-containing transcription factor VRN1-like [Cucurbita maxima] >XP_02298... [more]
XP_038902617.14.6e-21187.68uncharacterized protein LOC120089271 [Benincasa hispida][more]
BLAST of CmoCh20G008900 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G18990.19.6e-5034.05AP2/B3-like transcriptional factor family protein [more]
AT1G49480.19.1e-2445.54related to vernalization1 1 [more]
AT4G01580.13.0e-1938.33AP2/B3-like transcriptional factor family protein [more]
AT3G18960.13.9e-1942.16AP2/B3-like transcriptional factor family protein [more]
AT1G49475.11.9e-1336.17AP2/B3-like transcriptional factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 32..124
e-value: 2.0E-12
score: 57.3
coord: 304..399
e-value: 5.0E-18
score: 75.9
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 307..397
e-value: 2.0E-20
score: 72.5
coord: 37..118
e-value: 1.1E-13
score: 51.0
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 304..399
score: 14.042923
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 31..124
score: 14.367257
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 302..397
e-value: 2.33146E-23
score: 91.6204
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 31..122
e-value: 1.12672E-16
score: 73.1309
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 27..125
e-value: 1.7E-22
score: 81.2
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 286..401
e-value: 1.7E-34
score: 120.2
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 31..122
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 297..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR31920B3 DOMAIN-CONTAININGcoord: 27..399
NoneNo IPR availablePANTHERPTHR31920:SF36B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-LIKEcoord: 27..399

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G008900.1CmoCh20G008900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding