CmoCh20G008680 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTGCGCTGGCTCCTCGCAGTGGGGGCTCGCCTCCTGGCTCTGAATTGTTCTCTCTTAACCCATTTGAAGAAAGTAAGATCCAAAGTGGGTTCTTGTGAATCATTAATAAAATGGATTTACTTTTCGATGCATCGGGATGAACCAACTGTTTTATTTGACTAAACAATTTCTATGGGCTACAGATTTGGACGCACATGAAGGTCGGCTCTGCCTCTTGTCCTCTGCCGCAGCCGCTGCCGATTCTAAGGTCAACTCCATTTCCTCCACTTGAAGAAACATTTTCGTTTAATAAAGAATACCCCATTAATGAAATGCTTTCTTTCAGAGCCCCTGACGCCAATTTCAAGGCCTTAGTGCAACTTTCTGACAACCTCAAGCTGTGTTTGACTTCGATTCAAGAAATTTTATATGGGTTGGTTGCAATTCGTCAAACTGGTGACTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTCTTTTTCAATTTCTTTTTTGTTTTTGTTGATAATGGATATCACTTTAGAAATAGTGGCCGGCAATCAAGTGACAAAAATATGTTTACGTGCTTATATGATGAATTTGGGATGCCATTATGATCGAAGTCAACCATAGAGAAATTCAACATCATAATGCAGCCACAGATTTTGGGGGCACCCCCCAAATTCTTCCGTTTTACAGTCGTTGACTACTGTTTGTGAATCGATGTGACACCCGATTTAGTTGAGTAAAGCACGTAATTCATTAGCTGGAGATTGTTACCCTTTTTCACATATTGTGCTTATTTTTTTTCCCACATGCACACCAACTGTTCGATAAAATGCCCCAGTGGGTTGTTACAACTCAATGATTTAATTGGGTTGGCAGTGGACGTTAAACTGTGTATAACTTATGTCTATTATCACTTTACTTCTCCAGATTTCTACTTTCAAACGTTCAAAGGTAATGGGAAGGCCCGCCCCTCTTTTTTCCTCTTTATTAAGAGGCCACTTTTGCTTTATCAAAAGTAAGGCTTCAACCGAAAGCGGAGTTCTTGGTCTGTAGGAGGAGGACAAGAGACGGCCTTCTCAAGATCAGAGTGGACTATCACACCGATAGAACAATAACACGAGGAAGAGGTAAAAGCCTTTCTATGTTCCAGCTTTGAATCATTTGGCCTTTAACTATTCAATCCATATTCATGTTATGTATAGACCAAATCTATAGCTAGGCTATAAGCACATTGTTAGAGTAAATAGCTTATCATCTGACTTTTGTCTTAATCATGAGACTTGACTATAATTCTTTAGCTGGTGGGGGCTCTTAGTTACTGTATCTCTTCCTAAAAGTGTATTTGGTGGGTTATTCTTTGTCCATTTAGCGTTGGGTATGTATAAAATTGTATTAGTATGATTGCCTTTTATGAGTGGTTGAGAAAATATACACGCAACTTTAGTCCTGTTTCTTATTACATATAGTTTGTGACAATTAGGTGCTTTTTTAATGGTGGCTTCCTCATCTACATCTGGCTTTTGTTCCCTTTTGCTTTATGTTCCCTTTTGACAGAAACTATAGCGGTGAGATCCCACATCGTTGGAGAGGGGAACGAAGTATTCTTTACAAGGGTGTGGAAACCTCTTCCTAGCAAACACGTTTTAAAAACCTTGAGGGGAATCTCGAAAAGAAAACTCCAAAGAGGAAAATATTTGCTAACAGTGGGCTTGGGCTGTTACAAATGGTATGAGAGTTAGACACCGAGCGGTGTGCTAGTGAGGACGCTAGGTCCCAAAGGGGGGTGGATTGTAAGATCTCACGTCGGTTGGAGAGGAAAACAAAACATTCTTTACATGCGTGTGGAAACCTCTCCCTACCAGACGCGTTTTATGTGATGTTACGATATCCGTCGTTAAAATTGTACAAAACCCAAATTCAAAACCAAAGACTTATCATAAAAACAGCCTCCCTTCCGTCCCTCATTAATAGTAAAGCTTAACTGCTTAAGGATGGGAAATTATGTACTTCAAAAAAAAAACAAAAAAGAACAGAAAACCCTTCAAGCCAAACGTGTAGGATGAAAAGTCTTCGCCACCTCATCCACCAAACTTGATTCAAGGTTTAGGAAATTCGGGTATTCTCAATAAACCCCGAAGCACACCCCCAACTCTTGTTTCGAAGCTAAAACCAAGAAACAACGATTTAGACAAAGACTAAAATTTCAGCTGTGTTTTAATAGAATGAATCCCAATCACTTGTCTCAAAGCATTTAGTTTCAAGCACAAACCCATCTTCTTCACGTCCTATATCATTTTCAAGTAATCATACTCAAGCTGACTCACTAGAATGTAACTAGTTGGTACATGGGTCGAGTAAGTTGGATCAACTTATCATCTCATCTCAACCATGGAGTATATCTCTAATTTTAGTTTGGATAAATTTGCCTCTAATCAACTCTTATTTATTGGAGTCTACTCACTTGTCACCCGTTTTCTTTGCTATTATCAAGCCTATGATATTTGGAGTTCTTGGTTAGGTCTCTAGCCTTTAATGCTATTGACAAAGTTTCCTCTACGTGCAATCAAAACTCCTTCCTTTGCTTTTAACTTTTGCTAATGCCAATATGGAAAAAGCCATAGGTTTCCAATCAACATCTTGGTTGTTGAGTCGTTCAAGACTTTCCTTTATTCTTTTCTTAATCGAAAATGAGATACAAATCATATTTATGTATAGTTCTCTCATGGTTAATCACTAATCATCTAACTTAATCGAAATTATTGATGCTAAAGGGAAGCTATCAAGAAGCACCAAGCATAAATCAATGGAGGCTTCATAGTCTAGGCCCTAGGAGGCAATACACACAACCAAATGCTGGTAAAAACAAGTGATTCTGAGAGAACAAATAATAATAAAAGTCACAGTCAAACGTTTCACTTGGCTACGGAACAAACTTTATACAAATTGAAGAAGCTAATTCATTGACTTATCCCTAAGAAGTTGAAAATGAGTTTTTGCCTATGGCATCATATGCTATATTTAATATAGAAAAACCACCTATCATTTAGGTCAAAAACTAATAGTATATTACATAACATGAAGCTACTAAAATTCTAACATTGCATTTTAATCGTGTGTTTCTTGTTACCAAAGTTCTACTGATATCCTCAACTCCCAAACTCTTCTTGCTTTCAGATCATCACCAGAGAACTATGGCTTCTTGTTCTCTCATCCGTCTTGGTTTACTCATTATAATGGTAAGTTTTATGGATTTATAATCAAATTTTCGATCTTTACTACAATTTGGAACTGGGTTGTTTCTGTAGTTCCTAATCTCAATTCTATTTCTCTGAGTATGAAACTTTTTGTTTGATTTGCTTGTTGAAAGGGCAATCAAACTACCTGAAACAAAAGAAGTTGTAATTATCAATCCTATTGCAGGTTGCACAACAAAGTGCTGCTAGGAAATTAACAGATGGCTATGAAAAAGACATAGAACAGTTTGTGAATATGAAGATTAATGATCAAACAAACACCCATATTAAGGAAGTTGATGATGGCCATCAGAAGATGAGTAAGAATCATATGCATGTTCATGCACCATCTCACATGGAGCATTTAGATCCTTTATTATATGTTTTCTTCACCTTAAGTGATTTGAAAGCTGGAAAAAAAATGCCTATTTACTTCCCTTACTCAAGGCCATCCGAAACCCCGAAGTTACTGCCAAGAGAAGAAGCTGAATCCATTCCTTTCTCCACATCACAACTTGAATACCTGCTAACTCTATTCTCTTTTCCAAGAGACTCTCCTCAAGCCAAAGCTGTGGAGTATACTCTGAAGCAGTGTGAGCTCGAATCCATCAATGGAGAGACCAAATTCTGTGCCACTTCTTTAGAATCAATGCTGGATTTTGCTATAAAAATGTTGGGAAGTGAGACCCAATTGAAAGTTCTGACTAGCTCACGTCTCTCCAACTCCACTATCCTCCTTCAAAACTATACCATTTTGGAGGAACCCAGAGAAACAGTGGCTGCAAAAATGGTGGCATGTCATAGCATGCCTTACCCTTATGCCATTTTTTACTGTCATTGCCAAGAGAGTAATAATAGGCTGTTTGAGATTCTACTAGGGGCTGAGAATGGTGATAGAGTGAAAGCCAGTGCCATTTGCCACATGGATACCTCTCAGTGGGATAAAGATCATGCCTCGTTTAAAGTTCTGAAAACTAAACCAGGAGCTTCTCATGTCTGCCATTTTGTCTCTACTGATAGTTTAGTTTGGCTAGCTGCCTAA ATGGGTGTGCGCTGGCTCCTCGCAGTGGGGGCTCGCCTCCTGGCTCTGAATTGTTCTCTCTTAACCCATTTGAAGAAAATTTGGACGCACATGAAGGTCGGCTCTGCCTCTTGTCCTCTGCCGCAGCCGCTGCCGATTCTAAGAGCCCCTGACGCCAATTTCAAGGCCTTAGTGCAACTTTCTGACAACCTCAAGCTGTGTTTGACTTCGATTCAAGAAATTTTATATGGGTTGGTTGCAATTCGTCAAACTGATTTCTACTTTCAAACGTTCAAAGTAAGGCTTCAACCGAAAGCGGAGTTCTTGGTCTGTAGGAGGAGGACAAGAGACGGCCTTCTCAAGATCAGAGTGGACTATCACACCGATAGAACAATAACACGAGGAAGAGATCATCACCAGAGAACTATGGCTTCTTGTTCTCTCATCCGTCTTGGTTTACTCATTATAATGGTTGCACAACAAAGTGCTGCTAGGAAATTAACAGATGGCTATGAAAAAGACATAGAACAGTTTGTGAATATGAAGATTAATGATCAAACAAACACCCATATTAAGGAAGTTGATGATGGCCATCAGAAGATGAGTAAGAATCATATGCATGTTCATGCACCATCTCACATGGAGCATTTAGATCCTTTATTATATGTTTTCTTCACCTTAAGTGATTTGAAAGCTGGAAAAAAAATGCCTATTTACTTCCCTTACTCAAGGCCATCCGAAACCCCGAAGTTACTGCCAAGAGAAGAAGCTGAATCCATTCCTTTCTCCACATCACAACTTGAATACCTGCTAACTCTATTCTCTTTTCCAAGAGACTCTCCTCAAGCCAAAGCTGTGGAGTATACTCTGAAGCAGTGTGAGCTCGAATCCATCAATGGAGAGACCAAATTCTGTGCCACTTCTTTAGAATCAATGCTGGATTTTGCTATAAAAATGTTGGGAAGTGAGACCCAATTGAAAGTTCTGACTAGCTCACGTCTCTCCAACTCCACTATCCTCCTTCAAAACTATACCATTTTGGAGGAACCCAGAGAAACAGTGGCTGCAAAAATGGTGGCATGTCATAGCATGCCTTACCCTTATGCCATTTTTTACTGTCATTGCCAAGAGAGTAATAATAGGCTGTTTGAGATTCTACTAGGGGCTGAGAATGGTGATAGAGTGAAAGCCAGTGCCATTTGCCACATGGATACCTCTCAGTGGGATAAAGATCATGCCTCGTTTAAAGTTCTGAAAACTAAACCAGGAGCTTCTCATGTCTGCCATTTTGTCTCTACTGATAGTTTAGTTTGGCTAGCTGCCTAA ATGGGTGTGCGCTGGCTCCTCGCAGTGGGGGCTCGCCTCCTGGCTCTGAATTGTTCTCTCTTAACCCATTTGAAGAAAATTTGGACGCACATGAAGGTCGGCTCTGCCTCTTGTCCTCTGCCGCAGCCGCTGCCGATTCTAAGAGCCCCTGACGCCAATTTCAAGGCCTTAGTGCAACTTTCTGACAACCTCAAGCTGTGTTTGACTTCGATTCAAGAAATTTTATATGGGTTGGTTGCAATTCGTCAAACTGATTTCTACTTTCAAACGTTCAAAGTAAGGCTTCAACCGAAAGCGGAGTTCTTGGTCTGTAGGAGGAGGACAAGAGACGGCCTTCTCAAGATCAGAGTGGACTATCACACCGATAGAACAATAACACGAGGAAGAGATCATCACCAGAGAACTATGGCTTCTTGTTCTCTCATCCGTCTTGGTTTACTCATTATAATGGTTGCACAACAAAGTGCTGCTAGGAAATTAACAGATGGCTATGAAAAAGACATAGAACAGTTTGTGAATATGAAGATTAATGATCAAACAAACACCCATATTAAGGAAGTTGATGATGGCCATCAGAAGATGAGTAAGAATCATATGCATGTTCATGCACCATCTCACATGGAGCATTTAGATCCTTTATTATATGTTTTCTTCACCTTAAGTGATTTGAAAGCTGGAAAAAAAATGCCTATTTACTTCCCTTACTCAAGGCCATCCGAAACCCCGAAGTTACTGCCAAGAGAAGAAGCTGAATCCATTCCTTTCTCCACATCACAACTTGAATACCTGCTAACTCTATTCTCTTTTCCAAGAGACTCTCCTCAAGCCAAAGCTGTGGAGTATACTCTGAAGCAGTGTGAGCTCGAATCCATCAATGGAGAGACCAAATTCTGTGCCACTTCTTTAGAATCAATGCTGGATTTTGCTATAAAAATGTTGGGAAGTGAGACCCAATTGAAAGTTCTGACTAGCTCACGTCTCTCCAACTCCACTATCCTCCTTCAAAACTATACCATTTTGGAGGAACCCAGAGAAACAGTGGCTGCAAAAATGGTGGCATGTCATAGCATGCCTTACCCTTATGCCATTTTTTACTGTCATTGCCAAGAGAGTAATAATAGGCTGTTTGAGATTCTACTAGGGGCTGAGAATGGTGATAGAGTGAAAGCCAGTGCCATTTGCCACATGGATACCTCTCAGTGGGATAAAGATCATGCCTCGTTTAAAGTTCTGAAAACTAAACCAGGAGCTTCTCATGTCTGCCATTTTGTCTCTACTGATAGTTTAGTTTGGCTAGCTGCCTAA MGVRWLLAVGARLLALNCSLLTHLKKIWTHMKVGSASCPLPQPLPILRAPDANFKALVQLSDNLKLCLTSIQEILYGLVAIRQTDFYFQTFKVRLQPKAEFLVCRRRTRDGLLKIRVDYHTDRTITRGRDHHQRTMASCSLIRLGLLIIMVAQQSAARKLTDGYEKDIEQFVNMKINDQTNTHIKEVDDGHQKMSKNHMHVHAPSHMEHLDPLLYVFFTLSDLKAGKKMPIYFPYSRPSETPKLLPREEAESIPFSTSQLEYLLTLFSFPRDSPQAKAVEYTLKQCELESINGETKFCATSLESMLDFAIKMLGSETQLKVLTSSRLSNSTILLQNYTILEEPRETVAAKMVACHSMPYPYAIFYCHCQESNNRLFEILLGAENGDRVKASAICHMDTSQWDKDHASFKVLKTKPGASHVCHFVSTDSLVWLAA Homology
BLAST of CmoCh20G008680 vs. ExPASy Swiss-Prot
Match: Q9XI99 (BURP domain protein USPL1 OS=Arabidopsis thaliana OX=3702 GN=USPL1 PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 3.4e-58 Identity = 108/227 (47.58%), Postives = 155/227 (68.28%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy Swiss-Prot
Match: O65009 (BURP domain-containing protein BNM2A OS=Brassica napus OX=3708 GN=BNM2A PE=2 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.5e-58 Identity = 115/259 (44.40%), Postives = 164/259 (63.32%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy Swiss-Prot
Match: D2CZZ9 (BURP domain-containing protein BNM2C OS=Brassica napus OX=3708 GN=BNM2C PE=2 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-57 Identity = 110/254 (43.31%), Postives = 165/254 (64.96%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy Swiss-Prot
Match: B9G9L9 (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP17 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.4e-38 Identity = 93/263 (35.36%), Postives = 142/263 (53.99%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy Swiss-Prot
Match: Q0JEP3 (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=BURP5 PE=2 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 5.2e-38 Identity = 87/229 (37.99%), Postives = 127/229 (55.46%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy TrEMBL
Match: A0A6J1FYV5 (BURP domain-containing protein BNM2A-like OS=Cucurbita moschata OX=3662 GN=LOC111449092 PE=4 SV=1) HSP 1 Score: 802.4 bits (2071), Expect = 9.6e-229 Identity = 408/434 (94.01%), Postives = 409/434 (94.24%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy TrEMBL
Match: A0A6J1JGB4 (BURP domain-containing protein BNM2A-like OS=Cucurbita maxima OX=3661 GN=LOC111484249 PE=4 SV=1) HSP 1 Score: 773.1 bits (1995), Expect = 6.2e-220 Identity = 397/440 (90.23%), Postives = 401/440 (91.14%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy TrEMBL
Match: A0A0A0LL47 (BURP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G245480 PE=4 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 3.1e-155 Identity = 273/299 (91.30%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy TrEMBL
Match: A0A1S4E1P0 (LOW QUALITY PROTEIN: BURP domain-containing protein BNM2A-like OS=Cucumis melo OX=3656 GN=LOC103497496 PE=4 SV=1) HSP 1 Score: 555.8 bits (1431), Expect = 1.6e-154 Identity = 275/311 (88.42%), Postives = 288/311 (92.60%), Query Frame = 0
BLAST of CmoCh20G008680 vs. ExPASy TrEMBL
Match: A0A5A7TXB1 (BURP domain-containing protein BNM2A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004580 PE=4 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 5.0e-153 Identity = 269/299 (89.97%), Postives = 284/299 (94.98%), Query Frame = 0
BLAST of CmoCh20G008680 vs. NCBI nr
Match: KAG6571128.1 (BURP domain-containing protein BNM2A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 837.8 bits (2163), Expect = 4.2e-239 Identity = 425/440 (96.59%), Postives = 426/440 (96.82%), Query Frame = 0
BLAST of CmoCh20G008680 vs. NCBI nr
Match: XP_022944718.1 (BURP domain-containing protein BNM2A-like [Cucurbita moschata]) HSP 1 Score: 802.4 bits (2071), Expect = 2.0e-228 Identity = 408/434 (94.01%), Postives = 409/434 (94.24%), Query Frame = 0
BLAST of CmoCh20G008680 vs. NCBI nr
Match: XP_022986539.1 (BURP domain-containing protein BNM2A-like [Cucurbita maxima]) HSP 1 Score: 773.1 bits (1995), Expect = 1.3e-219 Identity = 397/440 (90.23%), Postives = 401/440 (91.14%), Query Frame = 0
BLAST of CmoCh20G008680 vs. NCBI nr
Match: KAG7010939.1 (BURP domain protein USPL1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 767.3 bits (1980), Expect = 7.0e-218 Identity = 388/404 (96.04%), Postives = 391/404 (96.78%), Query Frame = 0
BLAST of CmoCh20G008680 vs. NCBI nr
Match: XP_023512098.1 (BURP domain-containing protein BNM2A-like [Cucurbita pepo subsp. pepo] >XP_023512099.1 BURP domain-containing protein BNM2A-like [Cucurbita pepo subsp. pepo] >XP_023512100.1 BURP domain-containing protein BNM2A-like [Cucurbita pepo subsp. pepo] >XP_023512101.1 BURP domain-containing protein BNM2A-like [Cucurbita pepo subsp. pepo] >XP_023512102.1 BURP domain-containing protein BNM2A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 590.1 bits (1520), Expect = 1.5e-164 Identity = 294/297 (98.99%), Postives = 295/297 (99.33%), Query Frame = 0
BLAST of CmoCh20G008680 vs. TAIR 10
Match: AT1G49320.1 (unknown seed protein like 1 ) HSP 1 Score: 227.3 bits (578), Expect = 2.4e-59 Identity = 108/227 (47.58%), Postives = 155/227 (68.28%), Query Frame = 0
BLAST of CmoCh20G008680 vs. TAIR 10
Match: AT5G25610.1 (BURP domain-containing protein ) HSP 1 Score: 157.9 bits (398), Expect = 1.8e-38 Identity = 87/227 (38.33%), Postives = 126/227 (55.51%), Query Frame = 0
BLAST of CmoCh20G008680 vs. TAIR 10
Match: AT1G70370.1 (polygalacturonase 2 ) HSP 1 Score: 110.9 bits (276), Expect = 2.6e-24 Identity = 72/222 (32.43%), Postives = 106/222 (47.75%), Query Frame = 0
BLAST of CmoCh20G008680 vs. TAIR 10
Match: AT1G70370.2 (polygalacturonase 2 ) HSP 1 Score: 110.9 bits (276), Expect = 2.6e-24 Identity = 72/222 (32.43%), Postives = 106/222 (47.75%), Query Frame = 0
BLAST of CmoCh20G008680 vs. TAIR 10
Match: AT1G23760.1 (BURP domain-containing protein ) HSP 1 Score: 109.8 bits (273), Expect = 5.7e-24 Identity = 70/221 (31.67%), Postives = 106/221 (47.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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