CmoCh20G008040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G008040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR21-like
Location	Cmo_Chr20: 3960038 .. 3962188 (+)
RNA-Seq Expression	CmoCh20G008040
Synteny	CmoCh20G008040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAAACTGTGTGGATGGTTGATCTTTCTTCTCCATCTCTCATAATATCTGCAACCTAGAAGTGAGATCAATGAAGGTCTCTTCTCTGCAGGGAATTGTCAGACCACCCATTGGATGATTGAATCCAAACTCTTCCTCGGCCCTTTTTAGTAGATTTAGAAAAGAAGGATGGTTCAAATAAGGAATTGGAACCACAAATCTCCTTGTTTGGTTTTCCCCCACATAGACTGCAATATGTCCTTTGGGAATATTGGACTTTACTTTTGAAGAAGGGCCCTGCATTTTGAGAATTTGCTTGGTATGAAGAAGAATTGAAGGCAAACGGATTCCCATTTTTAAATCTTCTTGAAGTGAAAGAAGAACAAGCAACTGTCAGTCGTTGTGGCCGATGTTGATCTTGAAGTAAAAATCTGCAATACTTGGGATGATAATCTCTCTGCAGTTCGAGTTGGGAGATGGTTGTTCATTTGGTTTGAATGTATATATATAGAGTGAGGAAGAGGAGGTGTGAACAAAAGAATATCAAAGTAGGTGTCTGGTTGGACCTACATCATCAAGGCTCACATGGGGTTGCAAAATTGGTTGAAACACACTCGTTTTCTCATTTGGCGCAGCTTCTGATGGTACACATCCACTGTTTAATGGGAAGATATTAGAGAAGAAAACAAGTGGTCAAGGAAAACCAAAAATCAAATGCTGTGACCAAGAAAATAAACAGACAAAAAAAATCAATGTGATAAGAAATATTATTAAAACTTTACTGGTTTGTATCCATCAGATGCCCCCACCGAACAGGAAACCGAGTTTTCTTCGTCTACAAGCACTGTCCTCAACATCAAGAGTTATTGGAGTAAGCTTGCACCATGCTTGATGTTTTCATATTGTTCAGTTGGTCCATAACTTAAGAATGACAACCTTTTGAAAAGCAATAGTTTAGGAAATGGTCAATCTATATTTTTAATTATTGACTAAAAAATGCTTGATCCCTAATAGATGCTTATTTTTTTCTTATTAAGATCTCATTAAATGTTCAGAACTTGGACATCCACTCATTGAGAGGGAATGTTGCCGGTCAGCTTTCATGTGAACTTCAAAAAGGCAGGATCTCTCAATCTGCATCTGGTAAAATTTGCTCCACTTCCAGCTATGTTATAACCATCTTGAATATGTTTGTTGTCTAGGCTTATCGATTTGGTTTGTGAGACTCCAATAGCTGTACTAATATGCATCAAAGATTAGCTGCCAACTTTGGTTTTGTTCATATCTTGAGCCAGTTGGTTTAAATTTTTTTAATTATATAGGCTTTCTTTCCATTTAGACAAACAATATATTCCATTAAATGAATGTTTCCCTGCTATTCGTTGGCATGGCAAAAATTATTAGGGGGACGGTTTTGTTGTCTCAGCCATTTCTCTAACAAAAATATTATCGATTGCTTATGTAATGTGCTTAACTTAACTAACGAGCTTTCACTCGGCCACAATTTTCAGCTCAAATGGGTCCAGTATTTGCGAGGTTTACCAAAATGTTAGGTGACTTTGTTTTCCCGATATTATTTTCCAAGTAGCTGAAGATTATTATCTAGAATACAATACCATGTGACACAGTATACTTCACAAGTACATGCCTCCTAGTTGGCCCCATTCGTAGATGTCTCACCACTCATTTCTTAGAGCAAGCTAGTGGCCACGTCTCCCTTTTTAATCTATATATACATGTTTTCAATTCCAAAGCAACTCAATTCTCAAACTTCCAGTTCACCACCAAGTTTTCCCTTTTTCTCTCGACTGCTATTGTGCTACTTCTACATTCCAAAATTCAAGACCCTTCAACTTCCTGAGAGAAAAACAAAAAACCATGGGTTTCCATTTGGCGAGAGTGGTAAATGCTGTGCAAAATATTGGACTTTCTTCTCTAACAACACACTACAAATCGTCGGCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCAAAAAGAAGCGGTTTGTGATTCCAATTACTTACTTGAACGAGCCATTTTTCAAGGACTTGTTAAGTCGAGTTGGAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTTACTATTCCTTGCAGCGATGATACATTCCTTCATCTCATCTCTCGTCTAAGTGAGCCATGA

mRNA sequence

GCAAAACTGTGTGGATGGTTGATCTTTCTTCTCCATCTCTCATAATATCTGCAACCTAGAAGTGAGATCAATGAAGGTCTCTTCTCTGCAGGGAATTGTCAGACCACCCATTGGATGATTGAATCCAAACTCTTCCTCGGCCCTTTTTAGTAGATTTAGAAAAGAAGGATGGTTCAAATAAGGAATTGGAACCACAAATCTCCTTGTTTGGTTTTCCCCCACATAGACTGCAATATGTCCTTTGGGAATATTGGACTTTACTTTTGAAGAAGGGCCCTGCATTTTGAGAATTTGCTTGGTATGAAGAAGAATTGAAGGCAAACGGATTCCCATTTTTAAATCTTCTTGAAGTGAAAGAAGAACAAGCAACTGTCAGTCGTTGTGGCCGATGTTGATCTTGAAGTAAAAATCTGCAATACTTGGGATGATAATCTCTCTGCAGTTCGAGTTGGGAGATGGTTGTTCATTTGGTTTGAATGTATATATATAGAGTGAGGAAGAGGAGGTGTGAACAAAAGAATATCAAAGTAGGTGTCTGGTTGGACCTACATCATCAAGGCTCACATGGGGTTGCAAAATTGGTTGAAACACACTCGTTTTCTCATTTGGCGCAGCTTCTGATGGTACACATCCACTGTTTAATGGGAAGATATTAGAGAAGAAAACAAGTGGTCAAGGAAAACCAAAAATCAAATGCTGTGACCAAGAAAATAAACAGACAAAAAAAATCAATGTGATAAGAAATATTATTAAAACTTTACTGGTTTGTATCCATCAGATGCCCCCACCGAACAGGAAACCGAGTTTTCTTCGTCTACAAGCACTGTCCTCAACATCAAGAGTTATTGGAAACTTGGACATCCACTCATTGAGAGGGAATGTTGCCGGTCAGCTTTCATGTGAACTTCAAAAAGGCAGGATCTCTCAATCTGCATCTGCTCAAATGGGTCCAGTATTTGCGAGGTTTACCAAAATGTTAGTTCACCACCAAGTTTTCCCTTTTTCTCTCGACTGCTATTGTGCTACTTCTACATTCCAAAATTCAAGACCCTTCAACTTCCTGAGAGAAAAACAAAAAACCATGGGTTTCCATTTGGCGAGAGTGGTAAATGCTGTGCAAAATATTGGACTTTCTTCTCTAACAACACACTACAAATCGTCGGCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCAAAAAGAAGCGGTTTGTGATTCCAATTACTTACTTGAACGAGCCATTTTTCAAGGACTTGTTAAGTCGAGTTGGAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTTACTATTCCTTGCAGCGATGATACATTCCTTCATCTCATCTCTCGTCTAAGTGAGCCATGA

Coding sequence (CDS)

ATGCCCCCACCGAACAGGAAACCGAGTTTTCTTCGTCTACAAGCACTGTCCTCAACATCAAGAGTTATTGGAAACTTGGACATCCACTCATTGAGAGGGAATGTTGCCGGTCAGCTTTCATGTGAACTTCAAAAAGGCAGGATCTCTCAATCTGCATCTGCTCAAATGGGTCCAGTATTTGCGAGGTTTACCAAAATGTTAGTTCACCACCAAGTTTTCCCTTTTTCTCTCGACTGCTATTGTGCTACTTCTACATTCCAAAATTCAAGACCCTTCAACTTCCTGAGAGAAAAACAAAAAACCATGGGTTTCCATTTGGCGAGAGTGGTAAATGCTGTGCAAAATATTGGACTTTCTTCTCTAACAACACACTACAAATCGTCGGCAATCCGCAAAGGTTATTGTGCAGTTTATGTAGGGGAAAGCAAAAAGAAGCGGTTTGTGATTCCAATTACTTACTTGAACGAGCCATTTTTCAAGGACTTGTTAAGTCGAGTTGGAGAAGAATTTGGTTACAATCATCCTATGGGAGGCCTTACTATTCCTTGCAGCGATGATACATTCCTTCATCTCATCTCTCGTCTAAGTGAGCCATGA

Protein sequence

MPPPNRKPSFLRLQALSSTSRVIGNLDIHSLRGNVAGQLSCELQKGRISQSASAQMGPVFARFTKMLVHHQVFPFSLDCYCATSTFQNSRPFNFLREKQKTMGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP

Homology

[Close]

BLAST of CmoCh20G008040 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-21
Identity = 43/80 (53.75%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 116 IGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHP 175
           +G   + +   +SA  KG+ AVYVGES+KKR+++P++YL++P F+ LLS+  EEFG++HP
Sbjct: 8   LGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 67

Query: 176 MGGLTIPCSDDTFLHLISRL 196
           MGGLTIPC +DTF+++ SRL
Sbjct: 68  MGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmoCh20G008040 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.6e-21
Identity = 43/68 (63.24%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 128 SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDT 187
           SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DT
Sbjct: 22  SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDT 81

Query: 188 FLHLISRL 196
           F+++ SRL
Sbjct: 82  FINVTSRL 89

[Close]

BLAST of CmoCh20G008040 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.9e-21
Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 118 LSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMG 177
           LS  TT   +SA  KG+ AVYVGES+KKR+++PI+YLN+P F+ LLS+  EEFG++HPMG
Sbjct: 14  LSRSTT--AASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 73

Query: 178 GLTIPCSDDTFLHLISR 195
           GLTIPC +DTF+++ SR
Sbjct: 74  GLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmoCh20G008040 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L      ++    S+     K+  + KGY AVYVGE K +RFVIP++YLN+P F+D
Sbjct: 1   MGFRLP----GIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLS 197
           LLS+  EEFGY+HP GGLTIPCS+D F H+ S L+
Sbjct: 61  LLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of CmoCh20G008040 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-20
Identity = 43/68 (63.24%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 128 SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDT 187
           SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DT
Sbjct: 22  SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDT 81

Query: 188 FLHLISRL 196
           F+++ SRL
Sbjct: 82  FINVTSRL 89

[Close]

BLAST of CmoCh20G008040 vs. ExPASy TrEMBL
Match: A0A5D3BN78 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001920 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L R+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIPI YLN+PFFKD
Sbjct: 1   MGFRLGRMVNAVQNIRLSSLTTHHGSSAIRKGYCAVYVGESQKKRFVIPIAYLNDPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+VGEEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Sbjct: 61  LLSQVGEEFGYNHPMGGLTIPCSDDTFMDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. ExPASy TrEMBL
Match: A0A1S3C683 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497507 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L R+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIPI YLN+PFFKD
Sbjct: 1   MGFRLGRMVNAVQNIRLSSLTTHHGSSAIRKGYCAVYVGESQKKRFVIPIAYLNDPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+VGEEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Sbjct: 61  LLSQVGEEFGYNHPMGGLTIPCSDDTFMDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. ExPASy TrEMBL
Match: A0A0A0LIY4 (SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_2G258610 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39
Identity = 80/96 (83.33%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L R+VN +QNI LSSLTTH+ SSAIRKGYCAVYVGE++KKRFVIPI YLNEPFFKD
Sbjct: 1   MGFRLGRMVNVMQNIRLSSLTTHHGSSAIRKGYCAVYVGENQKKRFVIPIAYLNEPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+VGEEFGYNHPMGGLTIPCS+DTF+ LISRL+E
Sbjct: 61  LLSQVGEEFGYNHPMGGLTIPCSNDTFMDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. ExPASy TrEMBL
Match: A0A6J1CXQ4 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015414 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 8.7e-36
Identity = 72/96 (75.00%), Postives = 86/96 (89.58%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L R+VNAVQ++ LSSLTT++ SS +R+GYCAVYVGES+KKRFVIP+ YLNEP F+D
Sbjct: 1   MGFRLGRIVNAVQSLKLSSLTTNHGSSGVRRGYCAVYVGESQKKRFVIPVAYLNEPIFRD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+  EE+GYNHPMGGLTIPCSDDTF+ LISRL+E
Sbjct: 61  LLSQAEEEYGYNHPMGGLTIPCSDDTFIDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. ExPASy TrEMBL
Match: A0A0A0LM55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258630 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33
Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF +A++VNAV NIGLSSL T+ + S +RKGYCAVYVGES++KRFVIPI+YLN PFFKD
Sbjct: 1   MGFRVAKIVNAVHNIGLSSLATNQEPSIVRKGYCAVYVGESQRKRFVIPISYLNRPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRL 196
           LL +  EEFGYNHP GGLTIPCSDDTF+ LIS L
Sbjct: 61  LLCQAEEEFGYNHPTGGLTIPCSDDTFIGLISHL 94

[Close]

BLAST of CmoCh20G008040 vs. NCBI nr
Match: KAG6571065.1 (Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD
Sbjct: 1   MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP 199
           LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP
Sbjct: 61  LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSEP 97

[Close]

BLAST of CmoCh20G008040 vs. NCBI nr
Match: XP_008457943.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045665.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99618.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-40
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L R+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIPI YLN+PFFKD
Sbjct: 1   MGFRLGRMVNAVQNIRLSSLTTHHGSSAIRKGYCAVYVGESQKKRFVIPIAYLNDPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+VGEEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Sbjct: 61  LLSQVGEEFGYNHPMGGLTIPCSDDTFMDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. NCBI nr
Match: XP_038902470.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-40
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF LAR+VNAVQNI LSSLTTH+ SSAIRKGYCAVYVGES+KKRFVIP+ YLNEPFFKD
Sbjct: 1   MGFRLARMVNAVQNIRLSSLTTHHGSSAIRKGYCAVYVGESQKKRFVIPVAYLNEPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+V EEFGYNHPMGGLTIPCSDDTF+ LISRL+E
Sbjct: 61  LLSQVEEEFGYNHPMGGLTIPCSDDTFMDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. NCBI nr
Match: KGN61865.1 (hypothetical protein Csa_006212 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 6.0e-39
Identity = 80/96 (83.33%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L R+VN +QNI LSSLTTH+ SSAIRKGYCAVYVGE++KKRFVIPI YLNEPFFKD
Sbjct: 1   MGFRLGRMVNVMQNIRLSSLTTHHGSSAIRKGYCAVYVGENQKKRFVIPIAYLNEPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LLS+VGEEFGYNHPMGGLTIPCS+DTF+ LISRL+E
Sbjct: 61  LLSQVGEEFGYNHPMGGLTIPCSNDTFMDLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. NCBI nr
Match: KAG6605034.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-36
Identity = 74/96 (77.08%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 102 MGFHLARVVNAVQNIGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKD 161
           MGF L ++VNA+QN+ LSSLTTH+ SSAIRKGYCAVYVG+S+KKRF+IP+ YLNEPFFKD
Sbjct: 1   MGFRLEKMVNAMQNLRLSSLTTHHGSSAIRKGYCAVYVGQSQKKRFLIPVAYLNEPFFKD 60

Query: 162 LLSRVGEEFGYNHPMGGLTIPCSDDTFLHLISRLSE 198
           LL++V EEFGY+HPMGGLTIPCSD TF+ LISRL+E
Sbjct: 61  LLNQVEEEFGYDHPMGGLTIPCSDHTFIRLISRLNE 96

[Close]

BLAST of CmoCh20G008040 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 4.1e-22
Identity = 43/80 (53.75%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 116 IGLSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHP 175
           +G   + +   +SA  KG+ AVYVGES+KKR+++P++YL++P F+ LLS+  EEFG++HP
Sbjct: 8   LGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 67

Query: 176 MGGLTIPCSDDTFLHLISRL 196
           MGGLTIPC +DTF+++ SRL
Sbjct: 68  MGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmoCh20G008040 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-22
Identity = 43/68 (63.24%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 128 SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDT 187
           SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DT
Sbjct: 22  SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDT 81

Query: 188 FLHLISRL 196
           F+++ SRL
Sbjct: 82  FINVTSRL 89

[Close]

BLAST of CmoCh20G008040 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.7 bits (252), Expect = 7.1e-22
Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 118 LSSLTTHYKSSAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMG 177
           LS  TT   +SA  KG+ AVYVGES+KKR+++PI+YLN+P F+ LLS+  EEFG++HPMG
Sbjct: 14  LSRSTT--AASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 73

Query: 178 GLTIPCSDDTFLHLISR 195
           GLTIPC +DTF+++ SR
Sbjct: 74  GLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmoCh20G008040 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 43/68 (63.24%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 128 SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDT 187
           SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  EEFG++HPMGGLTIPC +DT
Sbjct: 22  SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDT 81

Query: 188 FLHLISRL 196
           F+++ SRL
Sbjct: 82  FINVTSRL 89

[Close]

BLAST of CmoCh20G008040 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 42/68 (61.76%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 128 SAIRKGYCAVYVGESKKKRFVIPITYLNEPFFKDLLSRVGEEFGYNHPMGGLTIPCSDDT 187
           SA  KG+ AVYVGES+KKR+++P++YLN+P F+ LLS+  +EFG++HPMGGLTIPC +DT
Sbjct: 22  SAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDT 81

Query: 188 FLHLISRL 196
           F+++ SRL
Sbjct: 82  FINVTSRL 89

The following BLAST results are available for this feature:

BLAST of CmoCh20G008040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	5.8e-21	53.75	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	7.6e-21	63.24	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	9.9e-21	61.04	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
P33083	1.3e-20	52.63	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJF6	1.7e-20	63.24	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of CmoCh20G008040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BN78	1.2e-40	86.46	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C683	1.2e-40	86.46	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497507 PE=...	[more]
A0A0A0LIY4	2.9e-39	83.33	SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_2G258610 PE=3 SV=1	[more]
A0A6J1CXQ4	8.7e-36	75.00	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0LM55	1.1e-33	74.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258630 PE=3 SV=1	[more]

BLAST of CmoCh20G008040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571065.1	1.1e-48	100.00	Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008457943.1	2.4e-40	86.46	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045665.1 aux...	[more]
XP_038902470.1	4.1e-40	86.46	auxin-induced protein 15A-like [Benincasa hispida]	[more]
KGN61865.1	6.0e-39	83.33	hypothetical protein Csa_006212 [Cucumis sativus]	[more]
KAG6605034.1	2.8e-36	77.08	Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh20G008040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18030.1	4.1e-22	53.75	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.4e-22	63.24	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	7.1e-22	61.04	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.2e-21	63.24	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	1.6e-21	61.76	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 123..195 e-value: 3.1E-22 score: 78.6
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 121..195
None	No IPR available	PANTHER	PTHR31929:SF40	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 121..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G008040.1	CmoCh20G008040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin