CmoCh20G007900 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G007900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
LocationCmo_Chr20: 3924501 .. 3929701 (+)
RNA-Seq ExpressionCmoCh20G007900
SyntenyCmoCh20G007900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTCGTTTGCCATCATCCCTGCTGCCTACTGCCAAGCAAATTCTCAAGATGCAATTGGGTTTTGTCAAGAAGCAGTCAGATGTTGTTCCTAGAGGTCATTGTGCTGTATATGTGGGAGATATCCAAAGGAAGCGATTTGTGGTTTCTGTTTCATACTTGAACCATCCTTCATTCCAACAACTACTCAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACTCGGAGGTCTACCAATTCCTTGCAAAGAGGGTGCATTCATTGATCTTACTTCTAGACTGCAACACTCTTGAAGGATGAAGATGATGGAATAGGCATCAATCAATTTTTGACCCATTTTTTTTTTCCTGAATTGATTTCTTTCTAACTCCCCTGGTTGTGTACAAATACAACCTTAAGCCTTTTGGAATGCAAATGAGTTTCTTTCTTAGTGACTTTCCTACCTAAACGTAATACAAATAGATTTTTCAGTCTCATTTCATGTTCCTCTTCTTATTCTTTGATACTCTTGTCTGTTCATTGCTGTCTGTCATGCAGAATTGGATGTTTTTTTTTTTTGGCTATTATACATGTTCAAAATGGAACAGAGAGACAACCTTTGCATACAATAGGGTCCAAATTCCATGAACACGACCTCATTCTGTTCATAGAAGAAAATGCAGGTGGCGTTGACAGTAATTAAATCTTGGATTGAATATTGGATAACGGAGCTCTCTTTCATAGCCATTATGAGGCCCTCCATAAATATATACGAGATGTGAGCTCTCTCCCATTGTTTTGACGGTTTGTCTCTACAAAATCCCAAAAATTGGCCAGCCTCCTATTAAACAGATCGACCAGTCTCTGCCATCAATACTACATAGTTAACTGCAGAAGGCAGATAGGTTGGATATTGATCTTCGATTATGAGATCGAACCAAGAGGAAAATTTCATAGAAAAATTTAACTTGTCACGCAAGGATCCAGTATGCTTTGGATAGGTTGAACTTTGAAGTTTGAATCTTCAAGATGCTACCCAGTTTCTTCAGTGATGTATCATGATCTGCAACAGTTTTTCTTAGTTCCATGGATTGCAGGTTAACCATCACAAATAAAGCAGAAAAGAAAAGGCTATATAGAAATTGATGCTAAATTTGTGTTTTCTTTTGATTCACTTCTGTTGGTAAATGCACCATTACAATGCCACTCATTTACAGGCAAGAAGGACATTCCATTCTACAACATTCTAGTATGGGTCAAAATACAATTGAGTCAGAAACAACCAGAAAAGGTTGTAAAAAATTGCAGCTTGAGCATTTCTGTTCATCGTTCAAGATACTTGCAGTCTAGAAGTGAGATGGATAAAGGCGTCTTCTTTGCAAGGAATTGTTAGGCCTCCATGTGGATGATGGAACCCAAACTTCTCCTCTGCGTGGCTGAGCAATTGCTGGAACGATGGATGGTTTAGGTAAAATATTGGAACCACAAACCGCTTCCTTTGGAACTCTCCCACATAAACTGCGACATGACCTTTTGGAACATCCAACTGGTTTTTGGTGAAACCTGACTGCATCTTCAGAATTTGCTTGGCATGAGGAACCAAAGATAGAAACCGAATCCCCATTTTCTTGAGATGAAAAGAGTGTCAAAAAGGTCAGGAGCTAACTATAAGAGGATGTAGTACTTGAAATGAGTTGAATTTTGTGTTTGAAGGCTCATTTTGATGTTTATATATATAGAGTTTGTGAAGGAAGTCCTATCTATGCTGGTGAGTGTGGCCTTTCCAGTGGCTATGTGGGGGTATTGATGTCTGGTGGTTGGGTATATTTGAGTATACTGGTTCACATGGCTTTGCCCAACTCATGAAAGGGCCATCCATTTTCTTCTCCCACTCCATGTTCGCTGTATTTTATACCACAAATTTCAGGTTCATTGGTCAATTGTTTCCATATATCTCTGTCAACTCATAGATACTTCCAGACAAATTCCATTACATTGGTAATAGAAATGCTGATTCTTGAAGCTGATGAGAAAATTTACACGTCTTTGTCATCAAGTGCTTGTTTGTTTTAAGTTTCTTTTCACCATCATGAACTAATTTTCCCTTGGCAAGACTTCGCTCGACAAACATCTATATGGTGTTTTAGCTATGTTCTGTCCATACTTTGATCTCTTACTTAAAAAAATCATCATTTTGGAAGTGTTTGTTTAAATTGTTTTTTTTTTTTTTTGTCTTATCAACTGATATAAAGTAGTAGCACATTTAAGGAATCAAGGGGGTCAATGAGTGTGGAAATACCGAAAATGAGCAAGTGTGTAACAGCTCAAGTCCACTGCTAGTAGATATTATCCACTTTGGCCCGTTACTTATCGTCATCAGCTTCACGATTTCAAAACGCATCTCTCCCTAGTAAGAAATTTTTCGTTCCCCTCTCCAGTCGATGTGGTACTTGCAAGGTGTGAGTCTTAACCAATAGATTATTTTAGAATGATCCAACCAATTGCAAGCATAGGGGTTGAGTTACATGTCAATAGAAATCACAGGTAGAAATACATACGGTTTTTCTTGTCCACCACACTCTGACCTTTTGAAAGAATACAAGGATGCCTTCCATACTCCAAAATCTCCAAGTGCCTTTTTCTTGTCCACCACACTCTGACCTTTTCGAGAGTTAGCTTGGGTTAGATTTTGGAGTATGGAAGGCATCCTTGTATTCTTTCAAAAGGTCAGAATACAAGGATGCCTATCAGTGAGATTTAAGAAAGCATCTTCTCTGCATGGAATCGTCAAGCCACCCATTGGATGGCAAAATCCGAATTCTTCTTCTGATCTATTGAGTAGATCTACAAAAGAAGGATGCTTCAAGTATGATATAGGGACCACAAATCTCTTCCTTTGAATCTCTCCCACGTAGACTGCCGATGTGGCCTTTGGGAACATCAGATTGATTTCTTGCAGATAGAGCTTGCATTTTCAGAATCTGCTTGGCATTAAGAAGAATCGATGGCAAACGGATTCCCATATCGAAAATTTCCTCAAAACAAGAGAGGGGTGACTGACTTTGAATGGTGTTCTGCTTGATTTTGAATTTGATGTAGGAAATAGAGTACTTGTTGGATGAGAATGGCTTTATTTCTTACGTATATTTATAAACTAGGAACTGGAGAGGAGAACAAAATGAGTATACTTTGAGGGCCTACTTCTCCAAAGGCTCACATGGGTTTGCTCTATCTATTAGATTTCATTCATTTCCTCTTGGAATATGAGTAGCAACATACCATGTGATACTCCCAAACCTCATTAAATGCTTCCATTAATGGACCTATTTCAGTGGCTGAGAGTACATTGGTGGTGATAGGAGCTGTGAGTCAAATGAAATCTGAGCTACTTCCCTCACCTACAAGCTTGGTTCATTGATGAAGAAATTTCCTCTTGCAAAGTGGTCCAATCAGACGGATATGTTGCCTTGTCTTTACACTTTCCTTACAAAGCCATCTGTTTGATGTGCTATTCCACTGGAACAAGCATGGTGTTGTTTGAAAATTGAATTACAAATGGGCCTTTACTTGAGCAATTCATGGCATACATTTCAAACACACATGGGAGCCAAGAGAAAGGATGAGATTAAACTAGAAAATTCTTGTGAGCCGACGAAGTTATGTTAAGTGGGTCCTCTAAGTTGTAAAGCTACCGATGCTAGTGAGCCACTTTTAAGCTCACTGGAAATACTTAGGCCACTTCTCTCTTCATAACTCTAAAAATATAGATCCAATATTAGTTTGAAGTACAAGTTTGAGCTCTGAGTATCACGATTCTACTGGAAATTCTAAACTTAAGAGTTGTTTACAGTCTCTTGATCATTTCCAATAGATTTAACAATGGGAATTCGTTTGCCAACATCCCTGCTGTTCGGTTTTGTCAAGAAGCAGTCTGATGTTGTTCCTAGAGGTCATGTTGCTGTATATGTGGGAGATACCCAAAAGAAGCGATTTGTGTGGTTCTTGTTTCGTACTTGAACCATCCTTCATTCCAACAACTACTCAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACATGGAGGTCTAACAATTCCTTGCAAAGAGGGCGCATTCATTGATCTTACTTCTAGACTGCAACACTCTTGAAGGATGAAGATGCTGGAATAGGCATCAATCAATTTTTGACTCATTTTTTTCCCGAATTGATTTCTTTCTAACTTGTGCACGAATACAATCTTAAGCCTTTTGGAATGTAAATGAGTTTCTTTGTTAGTGAATTTCCTACAAAAACGTAATACAAATAGATTTTCAGTCTCATTTCATGTTCCTCTTCTTATTCTTTGATACTCTTGTCTGTTCATTGCTGTCTGTGATGCCGAAGTGGATGTTTTTTTTGGCTATTATACATGTTCAAAATGGAACAGAAAGACAACCTTTGCATACAATAGGGTCCAAATTCCATTAACACGACCTCATTCTGTTCATAGAAGAAAATGCAGGTGACGTTGACAGTAAGTAAATCTTGGATTCAATATTGTATAATGGAGCTCTCTTTCATAGCCATTATGAAACCCTCCATAAATATATGCGAGCTATGAGCTCTCTCCCATCGTTTTGACGGTTCGTCTCTACAAAATCCCAAAACCCGACCAGTTTCCTATTAAACAGATCGATCAGTCTCTGCCATCAATACTTCATAGTTAACTGCAGAAGGAAGATAGGTTGGATATTGATCTTCGTTTATTAGATCAAAACAAGAGTAAAATTTCATAGAAAAATTTAACTTGTCACAAAAGGATCCAGTATGCTTTGGATAGGTTGAACTTTGAAGTTTGAATCTTCAAGATGCTACCTAGTTTCTTCAGTGATGTATCATGATCTGGCAACAGTTTTTCTTAGTTCCATGGATTGCAGGTTAACCATCACAAATAAAGCAGAAAAGAAAAGGCTATATAGAAATTGACGCTAAATTTGTGTTTTCTTTTGATTCACTTCGTTTGGTAAATGCACCATTACAATGCCATTCATTTACAGGCAAGAAAGGCATTCCACTCTACAACATTCTAGTATGGGTCAAAATACAATTGAGTCAGAAACAACCAGAAAAGGTTGTAAAAAATTGCAGCTTGAGCATTGCTGTTCATCCTTCAAGATACTTGCAGTCTAGAAGTGAGATCGATGAAGGCATCTTCTTTGCAAGGAATTGTTAG

mRNA sequence

ATGGGGATTCGTTTGCCATCATCCCTGCTGCCTACTGCCAAGCAAATTCTCAAGATGCAATTGGGTTTTGTCAAGAAGCAGTCAGATGTTGTTCCTAGAGGTCATTGTGCTGTATATGTGGGAGATATCCAAAGGAAGCGATTTGTGGTTTCTGTTTCATACTTGAACCATCCTTCATTCCAACAACTACTCAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACTCGGAGGTCTACCAATTCCTTGCAAAGAGGGCAAGAAAGGCATTCCACTCTACAACATTCTAGTATGGGTCAAAATACAATTGAGTCAGAAACAACCAGAAAAGGTTGTAAAAAATTGCAGCTTGAGCATTGCTGTTCATCCTTCAAGATACTTGCAGTCTAGAAGTGAGATCGATGAAGGCATCTTCTTTGCAAGGAATTGTTAG

Coding sequence (CDS)

ATGGGGATTCGTTTGCCATCATCCCTGCTGCCTACTGCCAAGCAAATTCTCAAGATGCAATTGGGTTTTGTCAAGAAGCAGTCAGATGTTGTTCCTAGAGGTCATTGTGCTGTATATGTGGGAGATATCCAAAGGAAGCGATTTGTGGTTTCTGTTTCATACTTGAACCATCCTTCATTCCAACAACTACTCAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACTCGGAGGTCTACCAATTCCTTGCAAAGAGGGCAAGAAAGGCATTCCACTCTACAACATTCTAGTATGGGTCAAAATACAATTGAGTCAGAAACAACCAGAAAAGGTTGTAAAAAATTGCAGCTTGAGCATTGCTGTTCATCCTTCAAGATACTTGCAGTCTAGAAGTGAGATCGATGAAGGCATCTTCTTTGCAAGGAATTGTTAG

Protein sequence

MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSFQQLLNRVEEEFGYHHPLGGLPIPCKEGKKGIPLYNILVWVKIQLSQKQPEKVVKNCSLSIAVHPSRYLQSRSEIDEGIFFARNC
Homology
[Close]
BLAST of CmoCh20G007900 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-16
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 31 VPRGHCAVYVGDIQRKRFVVSVSYLNHPSFQQLLNRVEEEFGYHHPLGGLPIPCKE 87
          VP+G+ AVYVGD + +RF + VSYLN PSFQ+LL++ EEEFGY HP+GGL IPCKE
Sbjct: 26 VPKGYAAVYVGD-KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKE 80

[Close]
BLAST of CmoCh20G007900 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-16
Identity = 44/86 (51.16%), Postives = 55/86 (63.95%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MG RLP        +   +       +S  VP+G+  VYVGD + +RF++ VSYLN PSF
Sbjct: 1  MGFRLPGI------RKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKE 87
          Q LLN+ EEEFGY HP+GGL IPCKE
Sbjct: 61 QDLLNQAEEEFGYDHPMGGLTIPCKE 79

[Close]
BLAST of CmoCh20G007900 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-16
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 24 VKKQSDVVPRGHCAVYVG--DIQRKRFVVSVSYLNHPSFQQLLNRVEEEFGYHHPLGGLP 83
          ++++S   PRG  AVYVG  D ++KR+VV VSYLN P FQQLL++ EEEFGY HP+GGL 
Sbjct: 14 IRRESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLT 73

Query: 84 IPCKE 87
          IPC E
Sbjct: 74 IPCHE 78

[Close]
BLAST of CmoCh20G007900 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 13 AKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSFQQLLNRVEEEFG 72
          AK+IL    G         P+G  AVYVG+ Q+KR++V VSYLN PSFQ LL++ EEEFG
Sbjct: 10 AKKILSRSTG----AGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFG 69

Query: 73 YHHPLGGLPIPCKE 87
          + HP+GGL IPC E
Sbjct: 70 FDHPMGGLTIPCPE 79

[Close]
BLAST of CmoCh20G007900 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 0 

Query: 28 SDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSFQQLLNRVEEEFGYHHPLGGLPIPCKE 87
          +   P+G  AVYVG+ Q+KR++V +SYLN PSFQ LL++ EEEFG+ HP+GGL IPC E
Sbjct: 21 ASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPE 79

[Close]
BLAST of CmoCh20G007900 vs. ExPASy TrEMBL
Match: A0A6J1FXZ4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448822 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.1e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF
Sbjct: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRVEEEFGYHHPLGGLPIPCKEG
Sbjct: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 87

[Close]
BLAST of CmoCh20G007900 vs. ExPASy TrEMBL
Match: A0A6J1FVH8 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448821 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36
Identity = 79/87 (90.80%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLL  AKQILKMQLGFVKKQSDVVPRGH AVYVGD QRKRFVV VSYLNHPSF
Sbjct: 1  MGIRLPSSLLTAAKQILKMQLGFVKKQSDVVPRGHVAVYVGDTQRKRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNR EEEFGYHHP GGL IPCKEG
Sbjct: 61 QQLLNRGEEEFGYHHPHGGLTIPCKEG 87

[Close]
BLAST of CmoCh20G007900 vs. ExPASy TrEMBL
Match: A0A6J1JFS6 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484006 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.8e-36
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLLPT KQILKMQLGFVKKQSDVVPRGH AVYVGD QR+RFVV VSYLNHPSF
Sbjct: 1  MGIRLPSSLLPTVKQILKMQLGFVKKQSDVVPRGHVAVYVGDTQRRRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRVEEEFGYHHP GGL I C+EG
Sbjct: 61 QQLLNRVEEEFGYHHPHGGLTILCQEG 87

[Close]
BLAST of CmoCh20G007900 vs. ExPASy TrEMBL
Match: A0A6J1CX72 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015409 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.3e-36
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSL+P AKQILKMQLGF KKQSDVVPRGH AVYVGDIQRKRFVV VS+LNHPSF
Sbjct: 1  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKE 87
          QQLLN+VEEEFG+HHP GGL IPCKE
Sbjct: 61 QQLLNQVEEEFGFHHPHGGLTIPCKE 86

[Close]
BLAST of CmoCh20G007900 vs. ExPASy TrEMBL
Match: A0A6J1JEU7 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484390 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 77/87 (88.51%), Postives = 78/87 (89.66%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MG+RLPSSLL  AKQI KMQ GFVKKQSD VPRGHCAVYVGDIQRKRFVV VSYLNHPSF
Sbjct: 1  MGLRLPSSLLLAAKQIHKMQFGFVKKQSDFVPRGHCAVYVGDIQRKRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRV EEFGYHHP GGL IPCKEG
Sbjct: 61 QQLLNRV-EEFGYHHPHGGLTIPCKEG 86

[Close]
BLAST of CmoCh20G007900 vs. NCBI nr
Match: XP_022944358.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944359.1 auxin-responsive protein SAUR24-like [Cucurbita moschata])

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF
Sbjct: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRVEEEFGYHHPLGGLPIPCKEG
Sbjct: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 87

[Close]
BLAST of CmoCh20G007900 vs. NCBI nr
Match: KAG6571055.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.5 bits (423), Expect = 8.2e-38
Identity = 81/87 (93.10%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLLP AKQILKMQLGFVKKQSDVVPRGH AVYVGD QRKRFVV VSYLNHPSF
Sbjct: 1  MGIRLPSSLLPAAKQILKMQLGFVKKQSDVVPRGHVAVYVGDTQRKRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRVEEEFGYHHP GGL IPCKEG
Sbjct: 61 QQLLNRVEEEFGYHHPHGGLTIPCKEG 87

[Close]
BLAST of CmoCh20G007900 vs. NCBI nr
Match: KAG6571047.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.2 bits (417), Expect = 4.1e-37
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLLPTAKQILKMQLGF KKQSDVVP+GH AVYVGD QRKRFVV VSYLNHPSF
Sbjct: 1  MGIRLPSSLLPTAKQILKMQLGFFKKQSDVVPKGHVAVYVGDTQRKRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRV+EEFGYHHP GGL IPCKEG
Sbjct: 61 QQLLNRVQEEFGYHHPHGGLTIPCKEG 87

[Close]
BLAST of CmoCh20G007900 vs. NCBI nr
Match: XP_022944357.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 4.5e-36
Identity = 79/87 (90.80%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLL  AKQILKMQLGFVKKQSDVVPRGH AVYVGD QRKRFVV VSYLNHPSF
Sbjct: 1  MGIRLPSSLLTAAKQILKMQLGFVKKQSDVVPRGHVAVYVGDTQRKRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNR EEEFGYHHP GGL IPCKEG
Sbjct: 61 QQLLNRGEEEFGYHHPHGGLTIPCKEG 87

[Close]
BLAST of CmoCh20G007900 vs. NCBI nr
Match: XP_022986188.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 161.4 bits (407), Expect = 5.9e-36
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNHPSF 60
          MGIRLPSSLLPT KQILKMQLGFVKKQSDVVPRGH AVYVGD QR+RFVV VSYLNHPSF
Sbjct: 1  MGIRLPSSLLPTVKQILKMQLGFVKKQSDVVPRGHVAVYVGDTQRRRFVVPVSYLNHPSF 60

Query: 61 QQLLNRVEEEFGYHHPLGGLPIPCKEG 88
          QQLLNRVEEEFGYHHP GGL I C+EG
Sbjct: 61 QQLLNRVEEEFGYHHPHGGLTILCQEG 87

[Close]
BLAST of CmoCh20G007900 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 95.1 bits (235), Expect = 4.8e-20
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0 

Query: 5  LPSSLLPTAKQILKMQL----------GFVKKQSDVVPRGHCAVYVGD-IQRKRFVVSVS 64
          L  S+LP AKQI K Q                 S +VP+GH AVYVG+ +++KRFVV +S
Sbjct: 3  LMRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVPIS 62

Query: 65 YLNHPSFQQLLNRVEEEFGYHHPLGGLPIPCKE 87
          YLNHP F++ LNR EEE G+HH +GGL IPC+E
Sbjct: 63 YLNHPLFREFLNRAEEECGFHHSMGGLTIPCRE 95

[Close]
BLAST of CmoCh20G007900 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0 

Query: 25 KKQSDVVPRGHCAVYVGD--IQRKRFVVSVSYLNHPSFQQLLNRVEEEFGYHHPLGGLPI 84
          +KQ   VP+GH AVYVG+    +KRFVV +SYLNHPSFQ LL+R EEEFG++HP+GGL I
Sbjct: 15 QKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGLTI 74

Query: 85 PCKE 87
          PC+E
Sbjct: 75 PCRE 78

[Close]
BLAST of CmoCh20G007900 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.0 bits (227), Expect = 4.1e-19
Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 0 

Query: 14 KQILKM-----QLGFVKKQSDVVPRGHCAVYVG---DIQRKRFVVSVSYLNHPSFQQLLN 73
          KQILK+     +       SD VP+GH AVYVG   ++++KRFVV +S+LNHPSF++ L+
Sbjct: 13 KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 74 RVEEEFGYHHPLGGLPIPCKE 87
          R EEEFG++HP+GGL IPC+E
Sbjct: 73 RAEEEFGFNHPMGGLTIPCRE 93

[Close]
BLAST of CmoCh20G007900 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQIL---KMQLGFVKKQSDVVPRGHCAVYVGDIQRKRFVVSVSYLNH 60
          M IR+P  +L ++KQIL   K+        S  VP+G+ AVYVG+   KRFVV VSYL+ 
Sbjct: 1  MAIRIP-RVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQ 60

Query: 61 PSFQQLLNRVEEEFGYHHPLGGLPIPCKE 87
          PSFQ LL + EEEFG+ HP+GGL IPC E
Sbjct: 61 PSFQDLLRKAEEEFGFDHPMGGLTIPCSE 88

[Close]
BLAST of CmoCh20G007900 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0 

Query: 1  MGIRLPSSLLPTAKQILKMQLGFVKKQSDVVPRGHCAVYVGD-IQRKRFVVSVSYLNHPS 60
          M IR+ S +L ++KQ+LK         +  +P+GH AVYVG+ +Q++RFVV V+YL+HP 
Sbjct: 1  MAIRI-SRVLQSSKQLLKSLSH--SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPC 60

Query: 61 FQQLLNRVEEEFGYHHPLGGLPIPCKE 87
          FQ+LL + EEEFG+ HP+GGL IPC E
Sbjct: 61 FQKLLRKAEEEFGFDHPMGGLTIPCTE 84

The following BLAST results are available for this feature:
BLAST of CmoCh20G007900 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P330792.4e-1667.86Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1[more]
P330802.4e-1651.16Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1[more]
Q412202.4e-1661.54Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S... [more]
Q9FK623.1e-1655.41Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S... [more]
Q9FJG01.2e-1559.32Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S... [more]
BLAST of CmoCh20G007900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FXZ49.1e-43100.00auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488... [more]
A0A6J1FVH82.2e-3690.80auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488... [more]
A0A6J1JFS62.8e-3689.66auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484006... [more]
A0A6J1CX726.3e-3688.37auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1JEU71.2e-3488.51auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484390... [more]
BLAST of CmoCh20G007900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944358.11.9e-42100.00auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944359.1 auxin-... [more]
KAG6571055.18.2e-3893.10Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6571047.14.1e-3790.80Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022944357.14.5e-3690.80auxin-responsive protein SAUR24-like [Cucurbita moschata][more]
XP_022986188.15.9e-3689.66auxin-responsive protein SAUR21-like [Cucurbita maxima][more]
BLAST of CmoCh20G007900 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G34790.14.8e-2051.61SAUR-like auxin-responsive protein family [more]
AT4G34800.11.8e-1965.63SAUR-like auxin-responsive protein family [more]
AT4G34810.14.1e-1954.32SAUR-like auxin-responsive protein family [more]
AT4G38840.11.2e-1853.93SAUR-like auxin-responsive protein family [more]
AT2G21210.12.0e-1851.72SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 25..86
e-value: 4.3E-22
score: 78.1
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 1..87
NoneNo IPR availablePANTHERPTHR31929:SF121AUXIN-RESPONSIVE PROTEIN SAUR21-LIKEcoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G007900.1CmoCh20G007900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin