CmoCh20G007620 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G007620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionProtodermal factor 1
LocationCmo_Chr20: 3831421 .. 3832731 (-)
RNA-Seq ExpressionCmoCh20G007620
SyntenyCmoCh20G007620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTCTCACCAACCTCCACCTCTGTTTCCTCGCTGCAGCTCTCCTCTCCGCCACTGCCCATGGCTACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAGTGCAAGGATGGTCAAATTTCCATGTTTGATTACCCGATCAACGGTATGATTAAATTTATCCTAACCCATTATTTTAATATTAAATTTATCGTAACCCGTCAACTTAATTTGGTCGTTGCAGGTGTTAAAGTGATGGTGGCTTGTGGCGATGGCAATGGGGGAGTGACGTATTTGAGGGAGGAGACTACGAATTTGTTTGGAAGCTTTACGATGAGATTTGATGGAATGCCGGATCTTAGCGGCTGTTATGCGACGGTTGGTGGAACTGGAGAGGGAGCGACGACGGACTGCGGCGGCGCTGGTAGCCCGCCGAGGAGTCTTAGGTTAATGTTTAGATTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTGCTGTCTCAACCGGCTCAATCAATGTCGTTCTGTTCCGCATCGGTTCATCCTGTCCCGGTCCCGGCCCCGGTTGTTATGCCATCACCACCAAATTTGCCTCCTCCGTCGAAGATGCTACCGCTTCCTCAACTGCCGCCGCTTCCTCCGCTGCCGCCGATGCCATTCTTGGAAGCATCTGCTTGTCAACATGAGTAAGTGAATTATTGAAAGGGAGTCTCACTTGACCAATTCAGAGGATAATCATAATATTATTATAAATCAGAAATATATCTCTATTGACATTTATTTATTTGTAGAAATTGGACGAATCCACGTTACAAATGTTATTGGAGAGCGGTGAACCCGGACATGAAAGTGGGCGTTGTTTTTGGAGTACTAGCGGCGAACCGTTACGGGACCGACTTGACCCTATGGAACGGGCTACAGGGGCGAGGGGACCCTTATAGGACCCTTCTACGAGAAGCCATAACGGCGTTCCTCAATTCCTACAATTCCGTTCATTTCCCCTACCCTGCACTGTCTGTAGTGGAAGGCTTAAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCACACGGCCCTTCGTTTCAAACGGGCCAATTCGGGTAATGGCCACGTCACCTGCAAATTCGATCCTTGCCAATAACTAATAATAATAATGAGATATTAATTAATGTTACTATGTAAGATCTTGAGGGTAATTTTAGTTGGTATAATTTCCATTCTTGATCTCTAAGACAGTATGATATTAATTTCTCGAGTTTGTTTTGATTAAATGGGTTGTTTCATTAGAACATTTTATATTGATATCGTAAGTGAAACGTTGTTTTCT

mRNA sequence

ATGGATTCTCTCACCAACCTCCACCTCTGTTTCCTCGCTGCAGCTCTCCTCTCCGCCACTGCCCATGGCTACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAGTGCAAGGATGGTCAAATTTCCATGTTTGATTACCCGATCAACGGTATGATTAAATTTATCCTAACCCATTATTTTAATATTAAATTTATCGTAACCCGTCAACTTAATTTGGTCGTTGCAGGTGTTAAAGTGATGGTGGCTTGTGGCGATGGCAATGGGGGAGTGACGTATTTGAGGGAGGAGACTACGAATTTGTTTGGAAGCTTTACGATGAGATTTGATGGAATGCCGGATCTTAGCGGCTGTTATGCGACGGTTGGTGGAACTGGAGAGGGAGCGACGACGGACTGCGGCGGCGCTGGTAGCCCGCCGAGGAGTCTTAGGTTAATGTTTAGATTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTGCTGTCTCAACCGGCTCAATCAATGTCGTTCTGTTCCGCATCGGTTCATCCTGTCCCGGTCCCGGCCCCGGTTGTTATGCCATCACCACCAAATTTGCCTCCTCCGTCGAAGATGCTACCGCTTCCTCAACTGCCGCCGCTTCCTCCGCTGCCGCCGATGCCATTCTTGGAAGCATCTGCTTGTCAACATGAAAATTGGACGAATCCACGTTACAAATGTTATTGGAGAGCGGTGAACCCGGACATGAAAGTGGGCGTTGTTTTTGGAGTACTAGCGGCGAACCGTTACGGGACCGACTTGACCCTATGGAACGGGCTACAGGGGCGAGGGGACCCTTATAGGACCCTTCTACGAGAAGCCATAACGGCGTTCCTCAATTCCTACAATTCCGTTCATTTCCCCTACCCTGCACTGTCTGTAGTGGAAGGCTTAAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCACACGGCCCTTCGTTTCAAACGGGCCAATTCGGGTAATGGCCACGTCACCTGCAAATTCGATCCTTGCCAATAACTAATAATAATAATGAGATATTAATTAATGTTACTATGTAAGATCTTGAGGGTAATTTTAGTTGGTATAATTTCCATTCTTGATCTCTAAGACAGTATGATATTAATTTCTCGAGTTTGTTTTGATTAAATGGGTTGTTTCATTAGAACATTTTATATTGATATCGTAAGTGAAACGTTGTTTTCT

Coding sequence (CDS)

ATGGATTCTCTCACCAACCTCCACCTCTGTTTCCTCGCTGCAGCTCTCCTCTCCGCCACTGCCCATGGCTACGCCGTCGTCACCGGCACCGTCTTTTGCGATCAGTGCAAGGATGGTCAAATTTCCATGTTTGATTACCCGATCAACGGTATGATTAAATTTATCCTAACCCATTATTTTAATATTAAATTTATCGTAACCCGTCAACTTAATTTGGTCGTTGCAGGTGTTAAAGTGATGGTGGCTTGTGGCGATGGCAATGGGGGAGTGACGTATTTGAGGGAGGAGACTACGAATTTGTTTGGAAGCTTTACGATGAGATTTGATGGAATGCCGGATCTTAGCGGCTGTTATGCGACGGTTGGTGGAACTGGAGAGGGAGCGACGACGGACTGCGGCGGCGCTGGTAGCCCGCCGAGGAGTCTTAGGTTAATGTTTAGATTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTGCTGTCTCAACCGGCTCAATCAATGTCGTTCTGTTCCGCATCGGTTCATCCTGTCCCGGTCCCGGCCCCGGTTGTTATGCCATCACCACCAAATTTGCCTCCTCCGTCGAAGATGCTACCGCTTCCTCAACTGCCGCCGCTTCCTCCGCTGCCGCCGATGCCATTCTTGGAAGCATCTGCTTGTCAACATGAAAATTGGACGAATCCACGTTACAAATGTTATTGGAGAGCGGTGAACCCGGACATGAAAGTGGGCGTTGTTTTTGGAGTACTAGCGGCGAACCGTTACGGGACCGACTTGACCCTATGGAACGGGCTACAGGGGCGAGGGGACCCTTATAGGACCCTTCTACGAGAAGCCATAACGGCGTTCCTCAATTCCTACAATTCCGTTCATTTCCCCTACCCTGCACTGTCTGTAGTGGAAGGCTTAAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCACACGGCCCTTCGTTTCAAACGGGCCAATTCGGGTAATGGCCACGTCACCTGCAAATTCGATCCTTGCCAATAA

Protein sequence

MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYFNIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVPAPVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ
Homology
BLAST of CmoCh20G007620 vs. ExPASy TrEMBL
Match: A0A6J1FXU0 (uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC111448725 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.0e-177
Identity = 313/339 (92.33%), Postives = 313/339 (92.33%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN           
Sbjct: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT
Sbjct: 61  ---------------GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP
Sbjct: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD 240
           APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD
Sbjct: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD 240

Query: 241 MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV 300
           MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV
Sbjct: 241 MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV 300

Query: 301 EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ
Sbjct: 301 EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 313

BLAST of CmoCh20G007620 vs. ExPASy TrEMBL
Match: A0A6J1JC51 (uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.8e-167
Identity = 298/342 (87.13%), Postives = 301/342 (88.01%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MDSL+ LHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYP+N           
Sbjct: 1   MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPMN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT
Sbjct: 61  ---------------GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQP Q MSFCSASVHPVP P
Sbjct: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPTQPMSFCSASVHPVPAP 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPP---LPPMPFLEASACQHENWTNPRYKCYWRAV 240
           APVVMP PPNLPPP KM PLPQLPPLPP   LPPMPFLE SACQHENWTNP YKCYWRAV
Sbjct: 181 APVVMPPPPNLPPPLKMPPLPQLPPLPPLPQLPPMPFLEVSACQHENWTNPDYKCYWRAV 240

Query: 241 NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPAL 300
           NPD KVGVVFG+LAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYP L
Sbjct: 241 NPDTKVGVVFGLLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTL 300

Query: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           SVVEGLNWALLGSQRAVLHTALRFKRANSGN HVTCKFDPCQ
Sbjct: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNSHVTCKFDPCQ 316

BLAST of CmoCh20G007620 vs. ExPASy TrEMBL
Match: A0A6J1CWR4 (uncharacterized protein LOC111015504 OS=Momordica charantia OX=3673 GN=LOC111015504 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.6e-130
Identity = 241/339 (71.09%), Postives = 265/339 (78.17%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MD L  L+LCFLAA+L  A A GYAVVTGTVFCDQCKDGQIS+FDYPIN           
Sbjct: 1   MDPLKKLNLCFLAASLFFAAAQGYAVVTGTVFCDQCKDGQISLFDYPIN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          G KVMVACGDGNGGVTY REETTNLFGSFTMRFDG PDLSGCYA 
Sbjct: 61  ---------------GAKVMVACGDGNGGVTYSREETTNLFGSFTMRFDGTPDLSGCYAA 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGGT  G    CGGA  P +SLRLMFR+F MEMYVVDSL+SQPA  M FCS SV+  PVP
Sbjct: 121 VGGTATG----CGGAVGPAKSLRLMFRMFDMEMYVVDSLISQPALPMPFCSPSVN--PVP 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD 240
           APV +P P + PPP   LPL     LPPLPP+PFLEASACQHENWTNP Y+CYWRAVNP+
Sbjct: 181 APVTVPPPSSPPPPPLRLPL-----LPPLPPVPFLEASACQHENWTNPDYRCYWRAVNPE 240

Query: 241 MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV 300
            KVGV+FG +AANRYGT++TLWNGLQGRGDPYRTLLREAITAFLNSYNS+H+PYP +SV+
Sbjct: 241 TKVGVIFGPVAANRYGTEVTLWNGLQGRGDPYRTLLREAITAFLNSYNSLHYPYPTISVL 300

Query: 301 EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           + +NWALLGS RAVL TALRFKRANSG+ H+TCKF PCQ
Sbjct: 301 QRMNWALLGSPRAVLITALRFKRANSGSPHLTCKFHPCQ 302

BLAST of CmoCh20G007620 vs. ExPASy TrEMBL
Match: A0A5D3BLG6 (Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001410 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.7e-119
Identity = 225/348 (64.66%), Postives = 256/348 (73.56%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISM--FDYPINGMIKFILTH 60
           MD L    LCFLA +L SATA+GY VV+G VFCD+CKDGQ+S+  FDYPIN         
Sbjct: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPIN--------- 60

Query: 61  YFNIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCY 120
                            GVKV +ACGDG GGVT LREE TN FG +TM F+G PDLSGC 
Sbjct: 61  -----------------GVKVKIACGDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCT 120

Query: 121 ATVGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVP 180
           ATV G  +GA T+C   G PPRSL+L+FRL  +EMY VD L+SQP Q MSFCS+   PVP
Sbjct: 121 ATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVP 180

Query: 181 VPAPVVMPSPPNLPPPSKMLPLPQLPPLPPLPPM------PFLEASACQHENWTNPRYKC 240
            P P   PSPP+LP   K+ PLP+LPPLPP PPM      PFLEASACQHENWTNP YKC
Sbjct: 181 GPKP---PSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQHENWTNPDYKC 240

Query: 241 YWRAVNPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHF 300
           YWRAVNPD KV V+FG +AA RYGTD+TLW GLQGRGDPY+TLLREAITAFLNSY+S+HF
Sbjct: 241 YWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHF 300

Query: 301 PYPALSVVEGLNWALL-GSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           PY +LSVV+  N AL+ GS+R+VLH ALRFK ANSGNGHVTCKFDPC+
Sbjct: 301 PYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK 319

BLAST of CmoCh20G007620 vs. ExPASy TrEMBL
Match: A0A1S3C647 (uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.7e-119
Identity = 225/348 (64.66%), Postives = 256/348 (73.56%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISM--FDYPINGMIKFILTH 60
           MD L    LCFLA +L SATA+GY VV+G VFCD+CKDGQ+S+  FDYPIN         
Sbjct: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPIN--------- 60

Query: 61  YFNIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCY 120
                            GVKV +ACGDG GGVT LREE TN FG +TM F+G PDLSGC 
Sbjct: 61  -----------------GVKVKIACGDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCT 120

Query: 121 ATVGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVP 180
           ATV G  +GA T+C   G PPRSL+L+FRL  +EMY VD L+SQP Q MSFCS+   PVP
Sbjct: 121 ATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVP 180

Query: 181 VPAPVVMPSPPNLPPPSKMLPLPQLPPLPPLPPM------PFLEASACQHENWTNPRYKC 240
            P P   PSPP+LP   K+ PLP+LPPLPP PPM      PFLEASACQHENWTNP YKC
Sbjct: 181 GPKP---PSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQHENWTNPDYKC 240

Query: 241 YWRAVNPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHF 300
           YWRAVNPD KV V+FG +AA RYGTD+TLW GLQGRGDPY+TLLREAITAFLNSY+S+HF
Sbjct: 241 YWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHF 300

Query: 301 PYPALSVVEGLNWALL-GSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           PY +LSVV+  N AL+ GS+R+VLH ALRFK ANSGNGHVTCKFDPC+
Sbjct: 301 PYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK 319

BLAST of CmoCh20G007620 vs. NCBI nr
Match: XP_022944208.1 (uncharacterized protein LOC111448725 [Cucurbita moschata] >KAG7010866.1 hypothetical protein SDJN02_27664 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 630.9 bits (1626), Expect = 6.2e-177
Identity = 313/339 (92.33%), Postives = 313/339 (92.33%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN           
Sbjct: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT
Sbjct: 61  ---------------GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP
Sbjct: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD 240
           APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD
Sbjct: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPD 240

Query: 241 MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV 300
           MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV
Sbjct: 241 MKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVV 300

Query: 301 EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ
Sbjct: 301 EGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 313

BLAST of CmoCh20G007620 vs. NCBI nr
Match: KAG6571035.1 (hypothetical protein SDJN03_29950, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 605.5 bits (1560), Expect = 2.8e-169
Identity = 306/342 (89.47%), Postives = 306/342 (89.47%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN           
Sbjct: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT
Sbjct: 61  ---------------GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQ MSFCSASVHPVPV 
Sbjct: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQPMSFCSASVHPVPV- 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPP---LPPMPFLEASACQHENWTNPRYKCYWRAV 240
            PVVMP PPNLPPP KM PLPQLPPLPP   LPPMPFLEASACQHENWTNP YKCYWRAV
Sbjct: 181 -PVVMPPPPNLPPPFKMPPLPQLPPLPPLPQLPPMPFLEASACQHENWTNPYYKCYWRAV 240

Query: 241 NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPAL 300
           NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPAL
Sbjct: 241 NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPAL 300

Query: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           SVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ
Sbjct: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 314

BLAST of CmoCh20G007620 vs. NCBI nr
Match: XP_023513005.1 (uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.1 bits (1546), Expect = 1.2e-167
Identity = 300/342 (87.72%), Postives = 304/342 (88.89%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MDSL+ LHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN           
Sbjct: 1   MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPIN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKVMVACG+GNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT
Sbjct: 61  ---------------GVKVMVACGNGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGG GEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQ MSFCSASVHPVPVP
Sbjct: 121 VGGIGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQPMSFCSASVHPVPVP 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPP---LPPMPFLEASACQHENWTNPRYKCYWRAV 240
           APVVMP PPN+PPP KM PLPQLPP+PP   LPPMPFLEASACQHENWTNP YKCYWRAV
Sbjct: 181 APVVMPPPPNVPPPFKMPPLPQLPPIPPLPQLPPMPFLEASACQHENWTNPDYKCYWRAV 240

Query: 241 NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPAL 300
           NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYP L
Sbjct: 241 NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTL 300

Query: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           SVVEGLNWALLGSQRAVLHTALRFKRANSGN HVTCKFDPCQ
Sbjct: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNSHVTCKFDPCQ 316

BLAST of CmoCh20G007620 vs. NCBI nr
Match: XP_022985735.1 (uncharacterized protein LOC111483701 [Cucurbita maxima])

HSP 1 Score: 597.0 bits (1538), Expect = 9.8e-167
Identity = 298/342 (87.13%), Postives = 301/342 (88.01%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MDSL+ LHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYP+N           
Sbjct: 1   MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPMN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT
Sbjct: 61  ---------------GVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQP Q MSFCSASVHPVP P
Sbjct: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPTQPMSFCSASVHPVPAP 180

Query: 181 APVVMPSPPNLPPPSKMLPLPQLPPLPP---LPPMPFLEASACQHENWTNPRYKCYWRAV 240
           APVVMP PPNLPPP KM PLPQLPPLPP   LPPMPFLE SACQHENWTNP YKCYWRAV
Sbjct: 181 APVVMPPPPNLPPPLKMPPLPQLPPLPPLPQLPPMPFLEVSACQHENWTNPDYKCYWRAV 240

Query: 241 NPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPAL 300
           NPD KVGVVFG+LAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYP L
Sbjct: 241 NPDTKVGVVFGLLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTL 300

Query: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           SVVEGLNWALLGSQRAVLHTALRFKRANSGN HVTCKFDPCQ
Sbjct: 301 SVVEGLNWALLGSQRAVLHTALRFKRANSGNSHVTCKFDPCQ 316

BLAST of CmoCh20G007620 vs. NCBI nr
Match: XP_038900829.1 (uncharacterized protein LOC120087893 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 1.1e-144
Identity = 264/350 (75.43%), Postives = 287/350 (82.00%), Query Frame = 0

Query: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYF 60
           MD L+ L LCFL A LL ATAHGYAVVTGTVFCDQCKDG ISMFDYP+N           
Sbjct: 1   MDPLSKLKLCFLTATLLLATAHGYAVVTGTVFCDQCKDGHISMFDYPMN----------- 60

Query: 61  NIKFIVTRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYAT 120
                          GVKV VACGDGNGGVTY+REETTNLFGSFTMRFDG PDLSGCYAT
Sbjct: 61  ---------------GVKVKVACGDGNGGVTYMREETTNLFGSFTMRFDGTPDLSGCYAT 120

Query: 121 VGGTGEGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVP 180
           +GGT +G T DCGGAG PP+SLRLMFRLF MEMYVVDSL++QPA+ MSFCSASV+PVPVP
Sbjct: 121 IGGTEQGTTMDCGGAGGPPKSLRLMFRLFDMEMYVVDSLVTQPAKPMSFCSASVNPVPVP 180

Query: 181 APVV-------MP-SPPNLPPPSKMLPLPQLPPLPP---LPPMPFLEASACQHENWTNPR 240
           APV+       +P SPP LPP  K+ PLPQLPPLPP   LPP+PFLEASACQH+NWTNP 
Sbjct: 181 APVITKPPSPSLPLSPPPLPPSFKLPPLPQLPPLPPLPKLPPVPFLEASACQHDNWTNPD 240

Query: 241 YKCYWRAVNPDMKVGVVFGVLAANRYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNS 300
           Y+CYWRAVNPD KVGV+FG+LAAN+YGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNS
Sbjct: 241 YRCYWRAVNPDTKVGVIFGLLAANQYGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNS 300

Query: 301 VHFPYPALSVVEGLNWALLGSQRAVLHTALRFKRANSGNGHVTCKFDPCQ 340
           ++FPYP +SVV+ LNWALLGS RAVL TALRFKRANSG GHVTCKFDPCQ
Sbjct: 301 LNFPYPTISVVQRLNWALLGSPRAVLLTALRFKRANSGYGHVTCKFDPCQ 324

BLAST of CmoCh20G007620 vs. TAIR 10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 276.2 bits (705), Expect = 3.6e-74
Identity = 165/379 (43.54%), Postives = 208/379 (54.88%), Query Frame = 0

Query: 7   LHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGMIKFILTHYFNIKFIV 66
           + + F    L +    GYA VTG+VFCDQCKDG+ S+FD+P                   
Sbjct: 10  IFVAFFVLCLATNGVTGYATVTGSVFCDQCKDGERSLFDFP------------------- 69

Query: 67  TRQLNLVVAGVKVMVACGDGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTG- 126
                  V+G+K+ V C D NG V   REETTN  G + MRFDG PDLS CYA V   G 
Sbjct: 70  -------VSGIKISVTCADENGQVYMSREETTNWLGGYVMRFDGTPDLSNCYAQVSDNGV 129

Query: 127 EGATTDCGGAGSPPRSLRLMFRLFSMEMYVVDSLLSQPAQSMSFC----SASVHPVP--- 186
           +   + C  A  P + L+LMF  F +E +  D+LL+QP Q  SFC    +A V P P   
Sbjct: 130 QQDPSSCSIASGPAQKLKLMFSFFGIETFAADALLAQPVQPSSFCPKPPTAPVMPPPQVP 189

Query: 187 ------VP------APVVMPSPPNLPPPSKM----------LPLP--------------- 246
                 VP       PV+ P PP   PP K+          LP P               
Sbjct: 190 VMPPPQVPVKPHPKVPVISPDPPATLPPPKVPVISPDPPTTLPPPLVPVINLPPVTSPPQ 249

Query: 247 -QLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPDMKVGVVFGVLAANRYGTDLT 306
            +LPPLP +PPMPF+E SAC H+ W  P Y+CYWRA+ PD KV V FG++A   YGTD+T
Sbjct: 250 FKLPPLPQIPPMPFVEPSACSHQLWMKPEYRCYWRAIGPDTKVAVAFGLVAGRIYGTDMT 309

Query: 307 LWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEGLNWALLG-SQRAVLHTAL 339
           +   L GRG+ Y+TLLREA TA LNSYNS+ FPY +++V+   N ALLG S+  VL TA+
Sbjct: 310 VREALDGRGEAYKTLLREATTALLNSYNSLGFPYNSVAVITYTNLALLGNSEHDVLMTAI 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FXU03.0e-17792.33uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC1114487... [more]
A0A6J1JC514.8e-16787.13uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701... [more]
A0A6J1CWR41.6e-13071.09uncharacterized protein LOC111015504 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5D3BLG63.7e-11964.66Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123... [more]
A0A1S3C6473.7e-11964.66uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=... [more]
Match NameE-valueIdentityDescription
XP_022944208.16.2e-17792.33uncharacterized protein LOC111448725 [Cucurbita moschata] >KAG7010866.1 hypothet... [more]
KAG6571035.12.8e-16989.47hypothetical protein SDJN03_29950, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023513005.11.2e-16787.72uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo][more]
XP_022985735.19.8e-16787.13uncharacterized protein LOC111483701 [Cucurbita maxima][more]
XP_038900829.11.1e-14475.43uncharacterized protein LOC120087893 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT2G16630.13.6e-7443.54Pollen Ole e 1 allergen and extensin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039923Protodermal factor 1PANTHERPTHR33210PROTODERMAL FACTOR 1coord: 74..337
coord: 9..51
NoneNo IPR availablePANTHERPTHR33210:SF24OS05G0346700 PROTEINcoord: 74..337
NoneNo IPR availablePANTHERPTHR33210:SF24OS05G0346700 PROTEINcoord: 9..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G007620.1CmoCh20G007620.1mRNA