CmoCh20G007570 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G007570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Rhodanese domain-containing protein
Location	Cmo_Chr20: 3801783 .. 3803486 (+)
RNA-Seq Expression	CmoCh20G007570
Synteny	CmoCh20G007570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTGAGAAGAGGTTGATATCAACTAACTTCTGCAATGCTACCCATTTCGATATTAAAGAAGAGTTTGATATCAATAACTCGTGTGTTCATTGCTAATCTGCAGGCCAGAGGATGTTGTGACTGTTGATGTTGAAGTTGCCAAAGATCTGTTGCAGAAGGGGCAGCTTTATTTGGATGTCAGGTCAGATCTTTTGTTCTTCTGTTATAATAATCTTCTGTCAAAGCCAAGAAGAAGAGGTAATTGATGAATGATTTTGGGTGCAGGACTGTTGAAGAGTATAACAAGGCCCACGTTGAGAATGCACTCAATGTTCCTTACATGTTCTTGACCTCAGAAGGTAATTATGAATACCTGAAAGCCTACGACTAGGAGATATTGTTTTCTTTAGATTTTTTTGCGTATGAACTTTCCTTTAAGGTTTTAAAACGCGTCTACTAGGGAGATATGGGATCTCACAATCCATCCTCATTCCTTTTCGGGCTTCCCCTCAAGTTTAAAAACTCGTTCGTTAGGGAGATGTAGGATCTTACAATCCATTCACTTTAGGGCCCAACGTTCTTGCTAGTACACCATCGGTGTCTAGCTCTGATAGCATTTGAAACAACCTAAGCCCACCGCTAGTAAATATTATCCTCTTTGGGTTTTTCCCTTTTCGAGCTTCCCCTCTAAATTTTAAAAACACGTCCCCTAAGGAAAGGTTTCCACACCCTTATAAGACATGTTTCGTTCTCCTTTCCAACCGATGTGGGATTTCACTATCCACCCCCCTTGGGAGCCTAGTATCATCGCTGGCACACCGCTCGGTATCTATCTCTCCAACCGATGTGGGATCTCACTATCTACCCCCTTGGAGGCCCAACGTTCTCATTTGCAGATCCTCCGTGTCTACCTCTCCAATCGATGAGAGATCTCACTATGCACTCCCTTTGGAGACCAAGCGTCCTCACTAACACAATACCTAGTATCTGACTTTGATATCATTTTTAATAACCCAAACTTACTACTAGTAAATGTATTCTTCTTTGGACTTTCCTAAAAAGTTTTAAAATGTATCGAGAAGTTTTTACACTCTTATAAGAAATGTTTCATTCTAAGTTCTCACAAAAAAACAAAACTACTGTCTTAGGATGTTCTGTATTGCTACACATTGATCTAGATACATCGTTTGATCTTATAGAATCTGAACGTTTGCCAACGAACAGGTCGAGTAAAGAATCCTGACTTTCTAGCACAAGTTACATCTATATTGAAGAAGGAAGATCATGTAGTAGTGGTAAGAAGAAAAAAAAACATATTTCTCGCCATTTTTGCATCCCAATGCAGATTTAAGGAGTAGATCATTGAACAAATTTGCAGGCTTGCAACAGTGGTGGTAGAGGACATCGCGCTTGCATCGATCTTCGTAACGCGGTGAGATTCGAGGTTCATAGAACTAAATTGTAAGGTTAACAAGCATGATTAAGTAACGAGATTTATTGGGAGATTTCAGGGGTATGAGCATGTGAAGAACATGGCAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGGGACAAACCAGCTGAAGAGCTCAAAATAGCTTGTAAGTTCCGAGGTTGAGCATTTCAAGGACAGAATCTTTGTTGTTTGTCTGTGTTTTTAGTTCCTGTAAGTTTCATTGTCTGTGCAAAACCAAGAAGTTTCTAAGTTCCTG

mRNA sequence

ATGGAGTCTGAGAAGAGGCCAGAGGATGTTGTGACTGTTGATGTTGAAGTTGCCAAAGATCTGTTGCAGAAGGGGCAGCTTTATTTGGATGTCAGGTCAGATCTTTTGTTCTTCTGTTATAATAATCTTCTGTCAAAGCCAAGAAGAAGAGGTCGAGTAAAGAATCCTGACTTTCTAGCACAAGTTACATCTATATTGAAGAAGGAAGATCATGTAGTAGTGGCTTGCAACAGTGGTGGTAGAGGACATCGCGCTTGCATCGATCTTCGTAACGCGGGGTATGAGCATGTGAAGAACATGGCAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGGGACAAACCAGCTGAAGAGCTCAAAATAGCTTGTAAGTTCCGAGGTTGAGCATTTCAAGGACAGAATCTTTGTTGTTTGTCTGTGTTTTTAGTTCCTGTAAGTTTCATTGTCTGTGCAAAACCAAGAAGTTTCTAAGTTCCTG

Coding sequence (CDS)

ATGGAGTCTGAGAAGAGGCCAGAGGATGTTGTGACTGTTGATGTTGAAGTTGCCAAAGATCTGTTGCAGAAGGGGCAGCTTTATTTGGATGTCAGGTCAGATCTTTTGTTCTTCTGTTATAATAATCTTCTGTCAAAGCCAAGAAGAAGAGGTCGAGTAAAGAATCCTGACTTTCTAGCACAAGTTACATCTATATTGAAGAAGGAAGATCATGTAGTAGTGGCTTGCAACAGTGGTGGTAGAGGACATCGCGCTTGCATCGATCTTCGTAACGCGGGGTATGAGCATGTGAAGAACATGGCAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGGGACAAACCAGCTGAAGAGCTCAAAATAGCTTGTAAGTTCCGAGGTTGA

Protein sequence

MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLFFCYNNLLSKPRRRGRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACKFRG

Homology

[Close]

BLAST of CmoCh20G007570 vs. ExPASy Swiss-Prot
Match: Q8RUD6 (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.9e-37
Identity = 77/130 (59.23%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 5   KRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLFF------CYNNLLSKPRRRGRVKNPDF 64
           K  EDV TVDV  AK  L  G  YLDVR++  F         N         GRV NPDF
Sbjct: 36  KTVEDVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDF 95

Query: 65  LAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPA 124
           L+QV S+ KK++H++VACN+GGRG RAC+DL N GY+HV NM GGYSAWVD+GFAGDKP 
Sbjct: 96  LSQVASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPP 155

Query: 125 EELKIACKFR 129
           E+LKIACKFR
Sbjct: 156 EDLKIACKFR 165

[Close]

BLAST of CmoCh20G007570 vs. ExPASy Swiss-Prot
Match: Q9FKW8 (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-19
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLF---FC-------YNNLLSKPRRR 60
           + S  + E+VV+VDV  AK LLQ G  YLDVR+   F    C          +L+ P  +
Sbjct: 5   ISSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTP--Q 64

Query: 61  GRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDS 120
           GRVKN +FL QV+S+L   D ++V C SG R  +A  +L  AGY+ V+N+ GGY AWVD 
Sbjct: 65  GRVKNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDH 124

[Close]

BLAST of CmoCh20G007570 vs. ExPASy Swiss-Prot
Match: Q39129 (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR16 PE=1 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-15
Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 12  TVDVEVAKDLLQKGQLYLDVRSDLLFF------CYNNLLSKPRRRGRVKNPDFLAQVTSI 71
           +V V VA DLL  G  YLDVR+   F         N         G  KNPDFL QV+S 
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQVSSH 69

Query: 72  LKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSG 112
             + D+++V C SGGR  +A  DL +AG+  VK++ GGYSAW  +G
Sbjct: 70  FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

[Close]

BLAST of CmoCh20G007570 vs. ExPASy Swiss-Prot
Match: F4IPI4 (Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=STR17 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-13
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 10  VVTVDVEVAKDLLQKGQLYLDVRSDLLF----FCYNNLLSKP----RRRGRVKNPDFLAQ 69
           V+T+DV  A+ LL  G  +LDVR+   F        N+ + P      +G+  NP+FL  
Sbjct: 32  VITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKH 91

Query: 70  VTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEEL 123
           V+S+  + DH+++ C SG R   A   L ++G++ V+NM GGY AWV+  F      +EL
Sbjct: 92  VSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKEL 151

[Close]

BLAST of CmoCh20G007570 vs. ExPASy Swiss-Prot
Match: Q38853 (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR15 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 12  TVDVEVAKDLLQKGQLYLDVRSDLLFFCYNNLLSKPRR-----------RGRVKNPDFLA 71
           +V V VA++L Q G  YLDVR+   F      +  P R            G VKNP FL 
Sbjct: 72  SVPVRVARELAQAGYRYLDVRTPDEF-----SIGHPTRAINVPYMYRVGSGMVKNPSFLR 131

Query: 72  QVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEE 121
           QV+S  +K D +++ C SG     A  DL  AG+  + ++AGGY AW ++    + P EE
Sbjct: 132 QVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTEN----ELPVEE 182

[Close]

BLAST of CmoCh20G007570 vs. ExPASy TrEMBL
Match: A0A6J1FXK5 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448561 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.1e-54
Identity = 114/135 (84.44%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVK 60
           MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVR+  +       N L+ P       GRVK
Sbjct: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRTVEEYNKAHVENALNVPYMFLTSEGRVK 60

Query: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120
           NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120

Query: 121 DKPAEELKIACKFRG 130
           DKPAEELKIACKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of CmoCh20G007570 vs. ExPASy TrEMBL
Match: A0A6J1JC15 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111483675 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.3e-53
Identity = 112/135 (82.96%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVK 60
           MESEKRPEDVVTVDV+VAKDLLQKGQLYLDVR+  +       N L+ P       GRVK
Sbjct: 1   MESEKRPEDVVTVDVQVAKDLLQKGQLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVK 60

Query: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120
           NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM GGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMGGGYSAWVDSGFAG 120

Query: 121 DKPAEELKIACKFRG 130
           DKPAEELKIACKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of CmoCh20G007570 vs. ExPASy TrEMBL
Match: A0A6J1CZ38 (protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111015512 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.6e-44
Identity = 94/135 (69.63%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVK 60
           ME EKR EDVVT+DV  A+D+LQKG LYLDVRS  +       N L+ P      +GRVK
Sbjct: 1   MEVEKRSEDVVTIDVRDARDMLQKGYLYLDVRSVEEYNKSHVENALNVPYMFITPQGRVK 60

Query: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120
           NPDFLAQV+S+LKKEDH+VVACNSGGR  RAC+DL NAG+EHV+NM GGYSAWVDSGF+G
Sbjct: 61  NPDFLAQVSSVLKKEDHLVVACNSGGRALRACVDLLNAGFEHVRNMGGGYSAWVDSGFSG 120

Query: 121 DKPAEELKIACKFRG 130
           +KP EELKIACKFRG
Sbjct: 121 NKPPEELKIACKFRG 135

[Close]

BLAST of CmoCh20G007570 vs. ExPASy TrEMBL
Match: A0A5D3BKL1 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001240 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.3e-42
Identity = 91/124 (73.39%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 12  TVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVKNPDFLAQVTSI 71
           TVDV+VAKDLL+KG LYLDVR+  +       N L+ P       GRVKNPDFLAQVTSI
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQVTSI 63

Query: 72  LKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIAC 130
           LKKEDH+VVACNSGGRG RAC+DL NAG+EHV NM GGYSAWVDSGFAG+KP EELKIAC
Sbjct: 64  LKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123

[Close]

BLAST of CmoCh20G007570 vs. ExPASy TrEMBL
Match: A0A1S3C5M3 (rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.3e-42
Identity = 91/124 (73.39%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 12  TVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVKNPDFLAQVTSI 71
           TVDV+VAKDLL+KG LYLDVR+  +       N L+ P       GRVKNPDFLAQVTSI
Sbjct: 4   TVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQVTSI 63

Query: 72  LKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIAC 130
           LKKEDH+VVACNSGGRG RAC+DL NAG+EHV NM GGYSAWVDSGFAG+KP EELKIAC
Sbjct: 64  LKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123

[Close]

BLAST of CmoCh20G007570 vs. NCBI nr
Match: KAG6571026.1 (Protein HIGH ARSENIC CONTENT 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLFFCYNNLLSKPRRRGRVKNPDFLA 60
           MESEKRPEDVVTVDV+VAKDLLQKGQLYLDVRSDLLFFCYNNLLS PRRRGRVKNPDFLA
Sbjct: 1   MESEKRPEDVVTVDVQVAKDLLQKGQLYLDVRSDLLFFCYNNLLSNPRRRGRVKNPDFLA 60

Query: 61  QVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEE 120
           QVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEE
Sbjct: 61  QVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEE 120

Query: 121 LKIACKFRG 130
           LKIACKFRG
Sbjct: 121 LKIACKFRG 129

[Close]

BLAST of CmoCh20G007570 vs. NCBI nr
Match: XP_022943998.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-54
Identity = 114/135 (84.44%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVK 60
           MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVR+  +       N L+ P       GRVK
Sbjct: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRTVEEYNKAHVENALNVPYMFLTSEGRVK 60

Query: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120
           NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120

Query: 121 DKPAEELKIACKFRG 130
           DKPAEELKIACKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of CmoCh20G007570 vs. NCBI nr
Match: XP_022985695.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 4.7e-53
Identity = 112/135 (82.96%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVK 60
           MESEKRPEDVVTVDV+VAKDLLQKGQLYLDVR+  +       N L+ P       GRVK
Sbjct: 1   MESEKRPEDVVTVDVQVAKDLLQKGQLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVK 60

Query: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120
           NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM GGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMGGGYSAWVDSGFAG 120

Query: 121 DKPAEELKIACKFRG 130
           DKPAEELKIACKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of CmoCh20G007570 vs. NCBI nr
Match: XP_023512925.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 7.6e-51
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRS--DLLFFCYNNLLSKP----RRRGRVK 60
           ME EKRPEDVVTVDVEVAKDLLQKGQLYLDVR+  +       N L+ P       GRVK
Sbjct: 1   MEGEKRPEDVVTVDVEVAKDLLQKGQLYLDVRTVEEYNKAHVENALNVPYMFLTSEGRVK 60

Query: 61  NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAG 120
           NPDFLAQV SILKKEDHVVVACNSGGRG RAC+DL NAGYEHVKNMAGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVASILKKEDHVVVACNSGGRGLRACVDLLNAGYEHVKNMAGGYSAWVDSGFAG 120

Query: 121 DKPAEELKIACKFRG 130
           DKPAEELKIACKFRG
Sbjct: 121 DKPAEELKIACKFRG 135

[Close]

BLAST of CmoCh20G007570 vs. NCBI nr
Match: KAG7010859.1 (Protein HIGH ARSENIC CONTENT 1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 9.2e-49
Identity = 103/123 (83.74%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 7   PEDVVTVDVEVAKDLLQKGQLYLDVRSDLLFFCYNNLLSKPRRRGRVKNPDFLAQVTSIL 66
           PEDVVTVDVEVAKDLLQKGQLYLDV                    RVKNPDFLAQVTSIL
Sbjct: 1   PEDVVTVDVEVAKDLLQKGQLYLDV--------------------RVKNPDFLAQVTSIL 60

Query: 67  KKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACK 126
           KKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACK
Sbjct: 61  KKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACK 103

Query: 127 FRG 130
           FRG
Sbjct: 121 FRG 103

[Close]

BLAST of CmoCh20G007570 vs. TAIR 10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 3.5e-38
Identity = 77/130 (59.23%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 5   KRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLFF------CYNNLLSKPRRRGRVKNPDF 64
           K  EDV TVDV  AK  L  G  YLDVR++  F         N         GRV NPDF
Sbjct: 36  KTVEDVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDF 95

Query: 65  LAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPA 124
           L+QV S+ KK++H++VACN+GGRG RAC+DL N GY+HV NM GGYSAWVD+GFAGDKP 
Sbjct: 96  LSQVASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPP 155

Query: 125 EELKIACKFR 129
           E+LKIACKFR
Sbjct: 156 EDLKIACKFR 165

[Close]

BLAST of CmoCh20G007570 vs. TAIR 10
Match: AT5G66170.3 (sulfurtransferase 18 )

HSP 1 Score: 94.7 bits (234), Expect = 5.6e-20
Identity = 56/130 (43.08%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLF---FC-------YNNLLSKPRRR 60
           + S  + E+VV+VDV  AK LLQ G  YLDVR+   F    C          +L+ P  +
Sbjct: 5   ISSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTP--Q 64

Query: 61  GRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDS 120
           GRVKN +FL QV+S+L   D ++V C SG R  +A  +L  AGY+ V+N+ GGY AWVD 
Sbjct: 65  GRVKNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDH 124

[Close]

BLAST of CmoCh20G007570 vs. TAIR 10
Match: AT5G66170.2 (sulfurtransferase 18 )

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 56/132 (42.42%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 1   MESEKRPEDVVTVDVEVAKDLLQKGQLYLDVRSDLLF---FC-------YNNLLSKPRRR 60
           + S  + E+VV+VDV  AK LLQ G  YLDVR+   F    C          +L+ P  +
Sbjct: 5   ISSSTKAEEVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTP--Q 64

Query: 61  GRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNA--GYEHVKNMAGGYSAWV 120
           GRVKN +FL QV+S+L   D ++V C SG R  +A  +L  A  GY+ V+N+ GGY AWV
Sbjct: 65  GRVKNQEFLEQVSSLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWV 124

[Close]

BLAST of CmoCh20G007570 vs. TAIR 10
Match: AT5G66040.1 (sulfurtransferase protein 16 )

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 12  TVDVEVAKDLLQKGQLYLDVRSDLLFF------CYNNLLSKPRRRGRVKNPDFLAQVTSI 71
           +V V VA DLL  G  YLDVR+   F         N         G  KNPDFL QV+S 
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQVSSH 69

Query: 72  LKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSG 112
             + D+++V C SGGR  +A  DL +AG+  VK++ GGYSAW  +G
Sbjct: 70  FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

[Close]

BLAST of CmoCh20G007570 vs. TAIR 10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.0e-14
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 10  VVTVDVEVAKDLLQKGQLYLDVRSDLLF----FCYNNLLSKP----RRRGRVKNPDFLAQ 69
           V+T+DV  A+ LL  G  +LDVR+   F        N+ + P      +G+  NP+FL  
Sbjct: 32  VITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKH 91

Query: 70  VTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEEL 123
           V+S+  + DH+++ C SG R   A   L ++G++ V+NM GGY AWV+  F      +EL
Sbjct: 92  VSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKEL 151

The following BLAST results are available for this feature:

BLAST of CmoCh20G007570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RUD6	4.9e-37	59.23	Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FKW8	7.9e-19	43.08	Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 S...	[more]
Q39129	4.1e-15	43.40	Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
F4IPI4	8.5e-13	36.36	Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q38853	1.1e-12	36.67	Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of CmoCh20G007570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXK5	2.1e-54	84.44	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JC15	2.3e-53	82.96	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CZ38	9.6e-44	69.63	protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3BKL1	5.3e-42	73.39	Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5M3	5.3e-42	73.39	rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis...	[more]

BLAST of CmoCh20G007570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571026.1	2.6e-67	98.45	Protein HIGH ARSENIC CONTENT 1, mitochondrial, partial [Cucurbita argyrosperma s...	[more]
XP_022943998.1	4.3e-54	84.44	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita moschata]	[more]
XP_022985695.1	4.7e-53	82.96	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima]	[more]
XP_023512925.1	7.6e-51	80.74	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7010859.1	9.2e-49	83.74	Protein HIGH ARSENIC CONTENT 1, mitochondrial, partial [Cucurbita argyrosperma s...	[more]

BLAST of CmoCh20G007570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21045.1	3.5e-38	59.23	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66170.3	5.6e-20	43.08	sulfurtransferase 18	[more]
AT5G66170.2	1.8e-18	42.42	sulfurtransferase 18	[more]
AT5G66040.1	2.9e-16	43.40	sulfurtransferase protein 16	[more]
AT2G17850.1	6.0e-14	36.36	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 13..113 e-value: 9.1E-7 score: 38.5
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 44..108 e-value: 9.6E-8 score: 32.5
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 22..116 score: 14.167768
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 2..113 e-value: 3.7E-21 score: 77.3
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 9..112
IPR044684	Rhodanese-like domain-containing protein STR17/STR18/HARC1-like	PANTHER	PTHR44542	THIOSULFATE SULFURTRANSFERASE 18	coord: 5..127
None	No IPR available	PANTHER	PTHR44542:SF14	PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED	coord: 5..127
None	No IPR available	CDD	cd00158	RHOD	coord: 18..108 e-value: 6.07844E-13 score: 58.0798

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G007570.1	CmoCh20G007570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity