CmoCh20G007390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G007390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Translation initiation factor 3 family protein, putative isoform 1
Location	Cmo_Chr20: 3691206 .. 3696860 (+)
RNA-Seq Expression	CmoCh20G007390
Synteny	CmoCh20G007390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTCCTGGAGGAGCTCTGGAACTGCGACTGGCGCGAGCCACCGTCCTGTTCGTTTGAAGAAAGCTTCGAGGGAGGGTTGAATCCATCGATCATTGTTCAGATTTTGCGCTCTTCGGTGATGCTATGATTGAGTCATTGAAACTTGGATACGATGGCAGTCTTCTGTAGAATAAACCAATCCAAGCTCAAGTCCCTTTCGGATCAATTCAAGAGACATTACTTTCAAATCTCTTATGCTGCTTCGCTCGATTCTGGTCGTATAACAAAACATGTTTTTGGGTGTGTAGAGCGGACAATTCCCCGAAGACCAGCTGATTGTGGCGGTAATGTCAGGTTCTTTGCTGCTCCGGTTCAGGTAGCGATTCTGATCCTTATGGATGAGTAATGGCACATCAGTTTTCAAATCCTGTGATAGTCGCTAAAATTTCATGCCTTGAACTTTCAGAAGTTACATATTAGAGTAGGCAACAAAATAAGATTTAGCTTTTTTTGAATTATTTATTTTCAATTTCATATTGGTTTTCACTAAAAAAAATTATCATTAACTAGTTAAGTTCGAATTTCTACTGATTATAAATCAATACTGGTTCGAATTTTCCTCCTCTCTAACTTGAGATCAGTCGTTTGTACATCCCTCAAATTGTTTATTATCTTGTTTGAATTATAGACCGTTTAATTTATGGTGTCTGATGTTGTTAACTCTATGACATGGTATTGAAGTTTCAAGGTAAGGCGAAGAAAGAAGAGAAGGACACAAGTGGGCCACGACTTAATGATAAAATCAAGGCCGACTTTGTGAGGCTTGTATCTGATGATGGTATGTGGGATATATATATTGAATTTTTGTTAATATCATAGCTTGAGACTCCCAAGTTAGAGATTCCTATTCACGTTCTTAAGATTGATACCATTTTCATAGTAATGCAAAATGAGAAGAGTGCATGGAACATTAAATTCTCATGTTTTGGGGAAGCGAGGTGTGTGTTTACTGTTTGATTAGTATTTTGTGTGATATTTATGTACAACTACATGCTACATCGATAAAATTTACTAGAAAACAAGGTATTGTATTGTATCTATCAGTTGAAATGAGTGATAGGGTATGCTAACTTGTTTGTGGAAAAATAGGAGCATGAACGTACATTTTTTTTTAAAAGAAGGAAGCTGTATAATTTAGACAAAAAAGAGGGTTTCCTCCTTATGGGGCGATGGAGCTACACAGCATTCTCCATTTGACTTGAATGTCAAAAGTTGGATTAGTACAAAATATTCTTTTGGGAGACACCATAGACAAAACCCAAAAAGTTTTTCTATCAAAAACAAATTTGTATTGAAAATTTTCTTTCAACGACCGACTATCTCTTTAAACCAAGTAGCCCCAAGGAAGAATCCATCACTGCTCTTCAAAAACTCTTTGAGAATGAGATTTCTCATGTAGGAAGTTGTGTAAAAATGTATCGGGCTTTCATTATGCATGTGGATTATGTTTATTTATTACTTGTTAACGTGTTGCGCATGTTTTTGTAGGACATACGGTTCTTAAGTTACATGAAGCTCTTGCACGTGCTCGTGAGCTCAATCTTGATTTGGTTGAGGTAAACTTCCATATTTTAATGGAAAAAAAAAACATAAATCTTTGTATGAAAGACCGAAACCATCATAAAAAACTAGAGAACATAAAGAGTAAGAAAAGTTGCTATCTTAGTAATTACTGAATTATTTCCTATTTATTATTAGATTTTGCAAAATTTGATTACATGTGTCAAATATTCTCAGGTCCAAACCAAAGCCAATCCACCTGTCTGTAAAATTATGGATTTCCATAGAGAGAAGTATAAACAGCAAATAAGGGAAAAGGACCGTGTTAAAAGCAAGGTGAGCTTCTCGATGCAGTGTATATATGGGTTTGTGACTACTGTTAAGACAGTGATAATGCTTTTAGTCTGGATGTGGAAATCAATCGTTTGTTATATATATATCACTTCTGTTACTTGTTGCCTTGTCGGTGCAGATCCGTACTTATCTTCATATTATATGTCAAGTTGGTTTTGTATTGTTGTTCATTTTGATAATGAATGGAACGTGATATAAATCAGCCAAAAACTTGGATGATTGCACTCATCTAATATTTTTGCGTTACCTTCATGGTTGCATAAATAAAACACACAATCGAGTCTGAATGTTCAAGCCTCATTGTGAATCATATGAAAAAATTATTCATTCAGTGTGCCTTTGCTTTGTTTTGCTGCAATCAATTTTGACTTTTTTAAAGCTGATTACACATGCAAATCTCTAGAACTTTAGCTTAATTTATTGCCGTTTTGAAGTTATGCCACTTTTAGTTGATTTTTCCCAGCAGGAAAACCTACAAGTAATATTACTTCAGGCCTCCAGAAATGACACCTTATAGTTGATATTAGAAAAAGTGTTATACATATTGTGAAAAGATTCATATTCTTGCAGGCTGAACTGAGTTTAAAAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGTAAGTAATTAATTTTTGAATGTTTAGACCTGCCTTGAATGGATATCACCATTAACCTTTTTGTCATTGCCTGAGATCTAAAAGTCAAAATTTTAAAATGTCGGCAAAGATTACTCATGTTGCTATATTGTTTCAGCGTTTGTTAATTTCCTCCGATTGTTGCTTCTACCTACAATATTGGCAGTACTTTTGGTATTTTTTCCTCGCCCAAGGAATATTATGAATTTGGTTCCTTTCTCTGTATGACACCATTTTTCTGTAATATGTCTGATGCTTACACCATTTTTCTGTAATATGTCTGATGCTTTGACTAAGAGTTGAGACCCAATTCTGTTTCCAGACAAGGAGTCCTTGAGCTCCAAATCAACAGCGTTTTGACCACTAAGAGGGCTTAGAAAAGCACTTTTGGTATTTGATACTAAAATATTTTTTTATATGGTCTTTAGGAGGAGAAGGACCTCAGGATGAAAGCTGATATGGTAAAGCGATTGATGGAACGTGGTTACCGTGTGAAGGTATTAGTTTTTTCATTTTACAAAATGACTATTTATAACTTCTGTTCCTTTAGTTTCTTATTTCCTTTCAGAGGTTAATAGTCTTTTGTTTGTGTTTTTCATTATAAAATCCGCTCAAAATGGCCTATGTCATCTCGCATTTTTCTTTCCCGATTTAGAATTGCTGACCATTACAATTCCCGTTAACAAACTACAACCATGTCATTAACTAGTATCCTACTAACCAAGTCTTGTCCAGACCCTGACCTAAGAGATTTCACTAGGTTCAAGTAATGCTAACTTTACTAAATTTCTGTTGCGACATCCAGTTCTCACTTTCTATCCTTTATTTACTTTATAAGTATCCTCATTAAATGTGTTGTCTTTGCCCTGGGTTGACCTAGTGGTCAATAAAGACCATGAAAATAATAAAGAGCCTAGAGATTGAGTTAAAACCATAGTGGTCACCTATCTATTTGGGATTTGATAGGTGAGATTCCACATTGGTTGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACCTTGAGGGAAAGCCCAAAGAGAACAGTATCTGCTAGTGGTGGGCTTGAGTTGTTACAAATGGCATCAGAGCCAGACACCAGACAATGTGTCATTGAGGAGGCTGAGCCCCGAGGGGGGTGGACAAGAGGCGGTGTGCCAGCATGGACGCTGGGTCCCAAAGGGGGGTGGATTGGGGGGTCCCTCATCAATTGGAGAAGGGATTGAGTGCCAGCGAGACGCTGGGCTCTGAAGGGGGCTAGATTATGAGATCCCACATCGGTTGGGGAGGAGAATGAAACACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCTTTTTAAAATTTTGAGGAAAAGTCCGAAAGGGAAAACCCAAAGAGAATAGTATCTACTAGAATGAAACACTGTTTATAAGGGTGTGAAAACCTGTCCTTAGTAGACGCGTTTTAAAAACCTTGAGAGAGCCTGAAAGGGAAAATCTAAAGAGAATAGTATCTGCTAGCGGTGGGCTTGGGTTGTTGTATAATATCTTATGAGTTTCCTTAGCTACTAAATGTACTAAGGTCAAGGTCAAGCAATCGTCTCACGAGAATAGTCGAGTTGCTTGCAAGCTTGCCCGAACACTCAGATATATTTAAAAAAATGGATAAGGACATGCCATTTGTGTATAAAGATCACGTGTATTTGCTTGCCGTATTTGTACTGTCCTTGTAATCTCTTTCTAAGACGATCCCCTGCTTTGTGATATGTACTATTGCTGCTTTTAGGTTGTTCAAATGTTCAATAGTAGCTTACTTTGTATGTTCCCTTTACAGTGTAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGCTATCTCGTCTTTCTGCTTTGGTATTGTCTCATGAATCACTTCATTTTCTCTCCAAACAATTCCAATCTATCAATTTCTGTTAAGTGTCTTATTTTTCCGACGTTCGTCGCTAACTATCTTTTTGCAGATAGAGGATGTAGCATTGGTGGAAAGTGGACCAAGGGTGGAAAGAGGGCAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCAAAGAAAGGGGGTGGCGGCAAAGCATCGAATGTTGTTGCAAATGCGAAGCAGAAGGCTCAAAATGGCACCACCTCTCCGACTTCACCAGCCCGTTCTTCAAGCCCAAGGGAAGAAGAAATGGGCCCTGAAGTTGATTTTGAGAGTTCTAAAGAAACTACCTGGTCCGTTGTTGATGGTAATAATGATTTTGACGAAGTGTTTGACTTAAAAGATGATGCTAATGGGACTCCCTCAAAAACTGCTGCCATGAAAATGAATGTCTCAGACCTTTCTCAACCAAGGGGGTTGCCTGATTCTGGCCGAACCAGCTCTGTTCCACTCTCTCGACAAGATCCTTCCATCAAAGCCGATAATAGATACAAAAAGATCGAACCTGTGAACCGTTTCCAACCACCAAATGCAATGGGCAGCAAGGGTCGAGGTGCTAAAGATTCATTCCGATCAGAACCTGAGATTCGTGATCAAAGGAGGCACACTCCGAACACAGACTTCTCGCCCTTGACGAGAGAAACCCGACGATATGAGGACAATGCTTCTGCATCAAGAAACATTAAGCCTGGTCCGCCACACAACACTGCTCCCAGTCCATCCAAAACTAGCTTTGGGATCTTCAGTTCTCTGAGCGCCAACGCTCCAGGAAAGCAAGATGCACCGGCCACAAGTTATCGAGGCAACCAAGGGCCTCCATACACGCCATCGACTAATCCCGATGACAAGGGACAGAAAAGCTGGGGAGTTTTCAGTAAGTAGAGTCCAAATGATTCCCCAAACAGGACATCAAAGCCTGATTAAGGTGAAGGTAGACATGCTTACAGTGATTGTTTCAGATATTATTAGATGGTAGGATGAATTTTGGTGATGATATTTATGTAGACATAATAAGACGGAACAAAGATTTTTGTTTCAGACAAGAACCGCTGCTGTGCATGCCCTGTTTTAAAGAGGCAACATAATTTTCTTCAAATGTATCAGTAATAAGAGATGAGAATGAGCATTATTAATCCC

mRNA sequence

CGCTCCTGGAGGAGCTCTGGAACTGCGACTGGCGCGAGCCACCGTCCTGTTCGTTTGAAGAAAGCTTCGAGGGAGGGTTGAATCCATCGATCATTGTTCAGATTTTGCGCTCTTCGGTGATGCTATGATTGAGTCATTGAAACTTGGATACGATGGCAGTCTTCTGTAGAATAAACCAATCCAAGCTCAAGTCCCTTTCGGATCAATTCAAGAGACATTACTTTCAAATCTCTTATGCTGCTTCGCTCGATTCTGGTCGTATAACAAAACATGTTTTTGGGTGTGTAGAGCGGACAATTCCCCGAAGACCAGCTGATTGTGGCGGTAATGTCAGGTTCTTTGCTGCTCCGGTTCAGTTTCAAGGTAAGGCGAAGAAAGAAGAGAAGGACACAAGTGGGCCACGACTTAATGATAAAATCAAGGCCGACTTTGTGAGGCTTGTATCTGATGATGGACATACGGTTCTTAAGTTACATGAAGCTCTTGCACGTGCTCGTGAGCTCAATCTTGATTTGGTTGAGGTCCAAACCAAAGCCAATCCACCTGTCTGTAAAATTATGGATTTCCATAGAGAGAAGTATAAACAGCAAATAAGGGAAAAGGACCGTGTTAAAAGCAAGGCTGAACTGAGTTTAAAAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGAGGAGAAGGACCTCAGGATGAAAGCTGATATGGTAAAGCGATTGATGGAACGTGGTTACCGTGTGAAGTGTAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGCTATCTCGTCTTTCTGCTTTGATAGAGGATGTAGCATTGGTGGAAAGTGGACCAAGGGTGGAAAGAGGGCAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCAAAGAAAGGGGGTGGCGGCAAAGCATCGAATGTTGTTGCAAATGCGAAGCAGAAGGCTCAAAATGGCACCACCTCTCCGACTTCACCAGCCCGTTCTTCAAGCCCAAGGGAAGAAGAAATGGGCCCTGAAGTTGATTTTGAGAGTTCTAAAGAAACTACCTGGTCCGTTGTTGATGGTAATAATGATTTTGACGAAGTGTTTGACTTAAAAGATGATGCTAATGGGACTCCCTCAAAAACTGCTGCCATGAAAATGAATGTCTCAGACCTTTCTCAACCAAGGGGGTTGCCTGATTCTGGCCGAACCAGCTCTGTTCCACTCTCTCGACAAGATCCTTCCATCAAAGCCGATAATAGATACAAAAAGATCGAACCTGTGAACCGTTTCCAACCACCAAATGCAATGGGCAGCAAGGGTCGAGGTGCTAAAGATTCATTCCGATCAGAACCTGAGATTCGTGATCAAAGGAGGCACACTCCGAACACAGACTTCTCGCCCTTGACGAGAGAAACCCGACGATATGAGGACAATGCTTCTGCATCAAGAAACATTAAGCCTGGTCCGCCACACAACACTGCTCCCAGTCCATCCAAAACTAGCTTTGGGATCTTCAGTTCTCTGAGCGCCAACGCTCCAGGAAAGCAAGATGCACCGGCCACAAGTTATCGAGGCAACCAAGGGCCTCCATACACGCCATCGACTAATCCCGATGACAAGGGACAGAAAAGCTGGGGAGTTTTCAGTAAGTAGAGTCCAAATGATTCCCCAAACAGGACATCAAAGCCTGATTAAGGTGAAGGTAGACATGCTTACAGTGATTGTTTCAGATATTATTAGATGGTAGGATGAATTTTGGTGATGATATTTATGTAGACATAATAAGACGGAACAAAGATTTTTGTTTCAGACAAGAACCGCTGCTGTGCATGCCCTGTTTTAAAGAGGCAACATAATTTTCTTCAAATGTATCAGTAATAAGAGATGAGAATGAGCATTATTAATCCC

Coding sequence (CDS)

ATGGCAGTCTTCTGTAGAATAAACCAATCCAAGCTCAAGTCCCTTTCGGATCAATTCAAGAGACATTACTTTCAAATCTCTTATGCTGCTTCGCTCGATTCTGGTCGTATAACAAAACATGTTTTTGGGTGTGTAGAGCGGACAATTCCCCGAAGACCAGCTGATTGTGGCGGTAATGTCAGGTTCTTTGCTGCTCCGGTTCAGTTTCAAGGTAAGGCGAAGAAAGAAGAGAAGGACACAAGTGGGCCACGACTTAATGATAAAATCAAGGCCGACTTTGTGAGGCTTGTATCTGATGATGGACATACGGTTCTTAAGTTACATGAAGCTCTTGCACGTGCTCGTGAGCTCAATCTTGATTTGGTTGAGGTCCAAACCAAAGCCAATCCACCTGTCTGTAAAATTATGGATTTCCATAGAGAGAAGTATAAACAGCAAATAAGGGAAAAGGACCGTGTTAAAAGCAAGGCTGAACTGAGTTTAAAAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGAGGAGAAGGACCTCAGGATGAAAGCTGATATGGTAAAGCGATTGATGGAACGTGGTTACCGTGTGAAGTGTAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGCTATCTCGTCTTTCTGCTTTGATAGAGGATGTAGCATTGGTGGAAAGTGGACCAAGGGTGGAAAGAGGGCAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCAAAGAAAGGGGGTGGCGGCAAAGCATCGAATGTTGTTGCAAATGCGAAGCAGAAGGCTCAAAATGGCACCACCTCTCCGACTTCACCAGCCCGTTCTTCAAGCCCAAGGGAAGAAGAAATGGGCCCTGAAGTTGATTTTGAGAGTTCTAAAGAAACTACCTGGTCCGTTGTTGATGGTAATAATGATTTTGACGAAGTGTTTGACTTAAAAGATGATGCTAATGGGACTCCCTCAAAAACTGCTGCCATGAAAATGAATGTCTCAGACCTTTCTCAACCAAGGGGGTTGCCTGATTCTGGCCGAACCAGCTCTGTTCCACTCTCTCGACAAGATCCTTCCATCAAAGCCGATAATAGATACAAAAAGATCGAACCTGTGAACCGTTTCCAACCACCAAATGCAATGGGCAGCAAGGGTCGAGGTGCTAAAGATTCATTCCGATCAGAACCTGAGATTCGTGATCAAAGGAGGCACACTCCGAACACAGACTTCTCGCCCTTGACGAGAGAAACCCGACGATATGAGGACAATGCTTCTGCATCAAGAAACATTAAGCCTGGTCCGCCACACAACACTGCTCCCAGTCCATCCAAAACTAGCTTTGGGATCTTCAGTTCTCTGAGCGCCAACGCTCCAGGAAAGCAAGATGCACCGGCCACAAGTTATCGAGGCAACCAAGGGCCTCCATACACGCCATCGACTAATCCCGATGACAAGGGACAGAAAAGCTGGGGAGTTTTCAGTAAGTAG

Protein sequence

MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNVRFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLDLVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVIVRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKETTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQDPSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRETRRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYTPSTNPDDKGQKSWGVFSK

Homology

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BLAST of CmoCh20G007390 vs. ExPASy Swiss-Prot
Match: Q6NLP2 (Translation initiation factor IF3-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IF3-1 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.4e-44
Identity = 171/527 (32.45%), Postives = 247/527 (46.87%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYF-QISYAASLDSGRITKHV--FGCVERTIPRRPADCG 60
           MA++  IN+S LK  S+Q  R+Y+ Q+  A+S    + T  +  F      I  RP++  
Sbjct: 1   MAIWRIINRSYLKYASNQLTRNYYTQVCLASSTHVVKQTTKLSSFDIPNSDICTRPSNIF 60

Query: 61  GNVRFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARAREL 120
            N+RF A     Q + K+ E D+ GPRLN+KI  D+VRLVS++GH V+ L EAL RA+EL
Sbjct: 61  QNLRFLATSA--QTRKKEAEVDSDGPRLNEKITGDYVRLVSEEGHCVVSLREALRRAKEL 120

Query: 121 NLDLVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEE 180
             DLVEVQ  A PPVCKI+ +  E YK+    K+R K+K   +++  D KE+RFT K E 
Sbjct: 121 QCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRP-DIKEIRFTPKIEA 180

Query: 181 KDLRMKADMVKRLMERGYRVKCSARGGED-------QDLGGLLSRLSALIEDVALVESGP 240
           KDL+ K+D   +LME GYRVKC A   +D       + L  LL R +  I D ALVES P
Sbjct: 181 KDLKFKSDQALKLMESGYRVKCLAVPDKDKHKELEPEKLLELLFRFTCFIGD-ALVESWP 240

Query: 241 RVERGQAYVIVRHVKFGPSKKGGGGKASNV-VANAKQKAQN----------GTTSPTSPA 300
             +R  A VIVRH KFGP KKGG     ++ + +A+ K ++           T       
Sbjct: 241 EADRKGAVVIVRHAKFGPPKKGGVKLMKDIDIKSARVKEESPKPDSSKAGVATVDDQEDI 300

Query: 301 RSSSPR-EEEMGPEVDFES--SKETTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNV 360
             S PR   E    V F++  +K    S   G  D         + +  P +      N 
Sbjct: 301 EKSEPRFSVEQAQPVKFQNAYAKREPSSEFSGGRDASRFEPQSPNQHVNPQRPRF--SNQ 360

Query: 361 SDLSQPRGLPDSGRTSSVPLSRQDPSIKADNRYKKIEPVNRFQPPN-AMGSKGRGAKDSF 420
           +   QP G  D  ++ + P S   P         + +P    QPP     ++    + + 
Sbjct: 361 APNQQPTGRFDP-QSPNQPPSAPRPQFPNQQPTGRFDPQFPSQPPRPQFPNQAPNQQSTG 420

Query: 421 RSEPEIRDQRRHTPNTDFSPLTRETRRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSS 480
           R  P+  +QR   P + F       +    + +   + +  PP     +P++   G F  
Sbjct: 421 RFNPQFPNQRPSPPQSRFPDQAPNQQPSGPSPNRHPDRQGPPPRFQNQAPNQQPTGRFEP 480

Query: 481 LSANAPGKQDAPATSYRGNQGPPYTPSTNPDDKGQKS-----WGVFS 498
              N P     P T       P  T +  P   G+ S     +G+FS
Sbjct: 481 QPPNPPRAPPRPQTRL-----PNETSNEQPTAPGRSSGPASGYGIFS 515

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BLAST of CmoCh20G007390 vs. ExPASy Swiss-Prot
Match: Q5LQ58 (Translation initiation factor IF-3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=infC PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-20
Identity = 67/172 (38.95%), Postives = 104/172 (60.47%), Query Frame = 0


Query: 77  EKDTSGPRLNDKIKADFVRLVSDDGHTVLKLH--EALARARELNLDLVEVQTKANPPVCK 136
           ++DT GPR+NDKI+A  +RL+  DG  V  +H  +A+A A E  LDLVE+   A PPVCK
Sbjct: 11  QRDT-GPRVNDKIRASEIRLIGADGENVGVVHPAKAMAMAEEAGLDLVEISPNATPPVCK 70

Query: 137 IMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDLRMKADMVKRLMERG 196
           IMDF + KY+QQ RE +  K +  + +     KEV+F   T+  D  +K   V + +E G
Sbjct: 71  IMDFGKYKYEQQKRESEARKKQKIIEV-----KEVKFRPNTDTHDYEVKMRNVYKFLENG 130

Query: 197 YRVKCSA--RGGE--DQDLG-GLLSRLSALIEDVALVESGPRVERGQAYVIV 242
            +VK +   RG E   Q+LG  LL R++  ++++  +E+ P++E  Q  +++
Sbjct: 131 DKVKVTLRFRGREMAHQNLGRELLERVAEDVKEMGKIENMPKMEGRQMIMMI 176

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BLAST of CmoCh20G007390 vs. ExPASy Swiss-Prot
Match: Q8PJE2 (Translation initiation factor IF-3 OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=infC PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.8e-18
Identity = 67/180 (37.22%), Postives = 105/180 (58.33%), Query Frame = 0


Query: 79  DTSGPRLNDKIKADFVRLVSDDGHT--VLKLHEALARARELNLDLVEVQTKANPPVCKIM 138
           D    R N +I+   VR++  DG    VL   EALA+A E  LDLVE+Q +A+PPVCKIM
Sbjct: 12  DNKQNRKNQEIRVPRVRVIGSDGEMVGVLSRDEALAKAEEEGLDLVEIQPQADPPVCKIM 71

Query: 139 DFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYR 198
           DF + K++QQ     +  ++A+   K+ + KE++F   T+E D ++K   ++R +E G +
Sbjct: 72  DFGKFKFEQQ-----KKANEAKKKTKQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDK 131

Query: 199 VKCSA--RGGE--DQDLG-GLLSRLSALIEDVALVESGPRVERGQAYVIVRHVKFGPSKK 252
           VK +   RG E   Q+LG  + +R+ A + D  ++ES PR+E  Q  +++      P KK
Sbjct: 132 VKVNIRFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMI-----APKKK 181

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BLAST of CmoCh20G007390 vs. ExPASy Swiss-Prot
Match: Q8P7Z3 (Translation initiation factor IF-3 OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=infC PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-17
Identity = 66/180 (36.67%), Postives = 105/180 (58.33%), Query Frame = 0


Query: 79  DTSGPRLNDKIKADFVRLVSDDGHT--VLKLHEALARARELNLDLVEVQTKANPPVCKIM 138
           D    R N +I+   VR++  DG    VL   EALA+A E  LDLVE+Q +A+PPVCKIM
Sbjct: 12  DNKQNRKNQEIRVPRVRVIGSDGEMVGVLSRDEALAKAEEEGLDLVEIQPQADPPVCKIM 71

Query: 139 DFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYR 198
           DF + K++QQ     +  ++A+   K+ + KE++F   T+E D ++K   ++R +E G +
Sbjct: 72  DFGKFKFEQQ-----KKANEAKKKTKQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDK 131

Query: 199 VKCSA--RGGE--DQDLG-GLLSRLSALIEDVALVESGPRVERGQAYVIVRHVKFGPSKK 252
           VK +   RG E   Q+LG  + +R+ A + +  ++ES PR+E  Q  +++      P KK
Sbjct: 132 VKVNIRFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMI-----APKKK 181

[Close]

BLAST of CmoCh20G007390 vs. ExPASy Swiss-Prot
Match: Q828D2 (Translation initiation factor IF-3 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=infC PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.8e-17
Identity = 74/214 (34.58%), Postives = 117/214 (54.67%), Query Frame = 0


Query: 83  PRLNDKIKADFVRLVSDDGHTV--LKLHEALARARELNLDLVEVQTKANPPVCKIMDFHR 142
           PR+ND+I+   VRLV   G  V  + L +AL  A+E +LDLVEV   A PPVCK+MD+ +
Sbjct: 13  PRINDRIRVPEVRLVGPSGEQVGIVPLAKALELAQEYDLDLVEVAASARPPVCKLMDYGK 72

Query: 143 EKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCS 202
            KY+  ++ ++  K++A   +     KE++   K +  D   K   V R +++G +VK +
Sbjct: 73  FKYESAMKAREARKNQAHTVI-----KEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKIT 132

Query: 203 A--RGGEDQ--DLG-GLLSRLSALIEDVALVESGPRVERGQAYVIVRHVKFGPSKKGGGG 262
              RG E    +LG  LL RL+  +ED+  VES P+ + G+  ++V     GP KK    
Sbjct: 133 IMFRGREQSRPELGYRLLQRLATDVEDLGFVESSPK-QDGRNMIMV----LGPHKKKTEA 192

Query: 263 KASNVVANAKQKAQNGTTSPTSPARSSSPREEEM 290
            A    A A +KA+    +  +P RS +  +E++
Sbjct: 193 MAEAREAQAARKAE----AKANPGRSQNAADEDI 212

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BLAST of CmoCh20G007390 vs. ExPASy TrEMBL
Match: A0A6J1FYA8 (translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111448446 PE=3 SV=1)

HSP 1 Score: 975.3 bits (2520), Expect = 9.5e-281
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV
Sbjct: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360
           TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD
Sbjct: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360

Query: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET 420
           PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET
Sbjct: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET 420

Query: 421 RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT 480
           RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT
Sbjct: 421 RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT 480

Query: 481 PSTNPDDKGQKSWGVFSK 499
           PSTNPDDKGQKSWGVFSK
Sbjct: 481 PSTNPDDKGQKSWGVFSK 498

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BLAST of CmoCh20G007390 vs. ExPASy TrEMBL
Match: A0A6J1JEV6 (translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111483789 PE=3 SV=1)

HSP 1 Score: 891.0 bits (2301), Expect = 2.3e-255
Identity = 461/484 (95.25%), Postives = 466/484 (96.28%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           M  FCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITK V GCVERTIPRRPA CG NV
Sbjct: 1   MTFFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKQVLGCVERTIPRRPAYCGDNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLS LSALIEDVA+VESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSHLSALIEDVAVVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKASNVVANAKQKAQN TTSPTSPARSSSPREE M PEVDFESSKE
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNDTTSPTSPARSSSPREEAMDPEVDFESSKE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360
           TTWSVVDGNNDFDEVFDLKDDANGTPSKTAA KMNVSDLSQPRGLPDSGRTSSVPLSRQD
Sbjct: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAKKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360

Query: 361 PSIKADNRYKKIEPVNR-FQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRE 420
           PSIKADNRYKKIEP NR FQPPN M SKGRGAKDS +SEP+IRDQRRHTPNT+FSPLTRE
Sbjct: 361 PSIKADNRYKKIEPANRFFQPPNVMDSKGRGAKDSLQSEPQIRDQRRHTPNTNFSPLTRE 420

Query: 421 TRRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPY 480
           TRRYEDNASASRNIKPGPPHNTAPS SKTSFGIFSSL+ NAPGKQDAPATSYRGNQGPPY
Sbjct: 421 TRRYEDNASASRNIKPGPPHNTAPSSSKTSFGIFSSLNDNAPGKQDAPATSYRGNQGPPY 480

Query: 481 TPST 484
           TPST
Sbjct: 481 TPST 484

[Close]

BLAST of CmoCh20G007390 vs. ExPASy TrEMBL
Match: A0A6J1CFY9 (translation initiation factor IF3-1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011172 PE=3 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 5.3e-207
Identity = 402/539 (74.58%), Postives = 432/539 (80.15%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MA FCRINQSKLK LS+QFKRHYFQISYA+SL SGR  KHV   +ER IP RPAD GG V
Sbjct: 1   MAFFCRINQSKLKLLSNQFKRHYFQISYASSLGSGRREKHVSENLERVIPIRPADLGGKV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RF+AAPVQFQGKAKKEEKDTSGPRLNDKIKA+FVRLV+DDGHT+L LHEAL RAREL LD
Sbjct: 61  RFYAAPVQFQGKAKKEEKDTSGPRLNDKIKAEFVRLVTDDGHTILSLHEALERARELKLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQ KANPPVCKIMDFHREKYKQQIREKDRVKSKAE+SL+KGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKIMDFHREKYKQQIREKDRVKSKAEVSLRKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIED A+VESGPRVERGQAYV+
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDEAVVESGPRVERGQAYVV 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGP-----EVDF 300
           VRHVKFGPSKKGGGGKAS VVAN + K QNGT    S AR+S   EEEM P     E D 
Sbjct: 241 VRHVKFGPSKKGGGGKASKVVANPRLKIQNGTAPLVSVARASRTSEEEMDPEESDSEADL 300

Query: 301 ESSKETTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKM--------NVSDLSQPRGLPD 360
           E+SKE TWS VDGNNDFDEVFDLKDDAN  PSK  A KM        N+SDLSQ R LPD
Sbjct: 301 ENSKE-TWSAVDGNNDFDEVFDLKDDANRIPSKYTAKKMDVVSDRDVNISDLSQLRRLPD 360

Query: 361 SGRTSSVPLSRQDPSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRH 420
           SGRTSSVPLS+QD S+KA+NRYKKIEPV RFQP N M +KGRGA+DS RSE +IRDQRRH
Sbjct: 361 SGRTSSVPLSQQDSSVKAENRYKKIEPVTRFQPTNVMDNKGRGARDSHRSETQIRDQRRH 420

Query: 421 TP-NTDFSPLTRETRRYEDNASASRNI--------KPGPPHNTAPSPSKTSFGIFSSLSA 480
            P N +FSP  RETRR E+N S  RNI        KP P H+  PSPSKTSFGIFSSL+A
Sbjct: 421 RPTNPNFSPPMRETRREENNTSPLRNIKHPLNATSKPDPSHHADPSPSKTSFGIFSSLNA 480

Query: 481 NAPGKQDAPATSYRGNQGPPYTPSTNP-------------------DDKGQKSWGVFSK 499
           NAPGKQDA ATSY+ N+ PPY PS NP                    +KG+KSWG+FSK
Sbjct: 481 NAPGKQDAAATSYQSNRCPPYAPSNNPYLHGASENTKFPATKSNENINKGKKSWGIFSK 538

[Close]

BLAST of CmoCh20G007390 vs. ExPASy TrEMBL
Match: A0A6J1I5H4 (translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469788 PE=3 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 5.0e-197
Identity = 381/533 (71.48%), Postives = 416/533 (78.05%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MA FCRIN         QFKRHYFQ+ YA+S+ SGR TKHV   + R IPR PAD GG V
Sbjct: 1   MAFFCRIN---------QFKRHYFQVCYASSIGSGRTTKHVSEYISRIIPRGPADFGGKV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RF+AAPVQFQGKAKKEE +TSGPRLNDKIKA+FVRLVSDDGH +L L EAL RAREL LD
Sbjct: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAILSLREALGRARELKLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQ KANPPVCKIMDFHREKYKQQIREKDRVKSKAE+ L+KGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKIMDFHREKYKQQIREKDRVKSKAEVGLRKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLME+GYRVKCSARGGEDQDLGGLLSRLSALIEDVA+VESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMEQGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKAS V  +A+Q+  NGTT     ARSS+P EEE GPE   E   E
Sbjct: 241 VRHVKFGPSKKGGGGKASKVAVSARQEVINGTTPLVPAARSSTPDEEEKGPE---EPDSE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKM--------NVSDLSQPRGLPDSGRTS 360
            TWSVVDGNNDFDEVFDLKDDANG P +T A KM        NVSDLS P  LPD+ RTS
Sbjct: 301 ATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDANVSDLSPPTRLPDTSRTS 360

Query: 361 SVPLSRQDPSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTD 420
           SVPLSRQD S KADNRYKKIEP NRFQPPN   +KGRGA+DS RS+P+IR+QRR      
Sbjct: 361 SVPLSRQDSSTKADNRYKKIEPANRFQPPNVTDNKGRGARDSLRSDPQIRNQRR------ 420

Query: 421 FSPLTRETRRYEDNASASRNI--------KPGPPHNTAPSPSKTSFGIFSSLSANAPGKQ 480
             PL +ETR  ++N+SASRNI        K GP H+T P PSKTSFGIFSSL+ANAPGKQ
Sbjct: 421 -QPLMKETRLDDNNSSASRNIKHPSNETSKSGPSHHTDPGPSKTSFGIFSSLNANAPGKQ 480

Query: 481 DAPATSYRGNQGPPYTPSTNPD-------------------DKGQKSWGVFSK 499
           DA +TSYRGN+G PY PSTNP+                   +KG KSWG+FS+
Sbjct: 481 DAASTSYRGNRGLPYPPSTNPNVPGASESLKFSLTKSDDNVNKGSKSWGIFSE 514

[Close]

BLAST of CmoCh20G007390 vs. ExPASy TrEMBL
Match: A0A6J1G8E4 (translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111451694 PE=3 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.9e-194
Identity = 380/531 (71.56%), Postives = 415/531 (78.15%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MA FCRINQSKL   S+QFKRHYFQ+ YA S+ SGR TKH    + R IPR PAD GG V
Sbjct: 1   MAFFCRINQSKLTHFSNQFKRHYFQVCYAPSIGSGRSTKHDSEYIARIIPRGPADFGGKV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RF+AAPVQFQGKAKKEE +TSGPRLNDKIKA+FVRLVSDDGH ++ L EAL RAREL LD
Sbjct: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQ KANPPVCKIMDFHREKYKQQIREKDRVKSKAE  L+KGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKIMDFHREKYKQQIREKDRVKSKAEGGLRKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMK DMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVA+VESGPRVERGQAYVI
Sbjct: 181 RMKVDMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKAS V  NA+Q+ +NGTT     ARSS+P EEEMGPE   ES   
Sbjct: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPLVPAARSSNPDEEEMGPE---ESDSG 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKM--------NVSDLSQPRGLPDSGRTS 360
            TWSVVDGNNDFDEVFDLKDDA G P +T A KM        NVSDLS P  LPD+ RTS
Sbjct: 301 ATWSVVDGNNDFDEVFDLKDDAKGIPLETTANKMNVASDRDVNVSDLSPPTRLPDTSRTS 360

Query: 361 SVPLSRQDPSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQ-RRHTPNT 420
           SVPLSRQD S KADNRYKKIEP NRFQPPN M +KGRGA+DS RSEP+IR+Q R+   NT
Sbjct: 361 SVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNT 420

Query: 421 DFSPLT-RETRRYEDNASASRNI--------KPGPPHNTAPSPSKTSFGIFSSLSANAPG 480
           + SP + RETR  ++ +SASRN         K G   +T P PSKTSFGIFS+L+ANAP 
Sbjct: 421 NLSPPSMRETRPDDNVSSASRNTKHPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPV 480

Query: 481 KQDAPATSYRGNQGPPYTP---------------STNPDDKGQKSWGVFSK 499
           KQDA +TSYRGN+GP   P               S N  +KG KSWG+FS+
Sbjct: 481 KQDAASTSYRGNRGPSTNPNAPGASESLKFSLTKSDNNVNKGSKSWGIFSE 528

[Close]

BLAST of CmoCh20G007390 vs. NCBI nr
Match: XP_022943820.1 (translation initiation factor IF3-1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 975.3 bits (2520), Expect = 2.0e-280
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV
Sbjct: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360
           TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD
Sbjct: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360

Query: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET 420
           PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET
Sbjct: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET 420

Query: 421 RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT 480
           RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT
Sbjct: 421 RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT 480

Query: 481 PSTNPDDKGQKSWGVFSK 499
           PSTNPDDKGQKSWGVFSK
Sbjct: 481 PSTNPDDKGQKSWGVFSK 498

[Close]

BLAST of CmoCh20G007390 vs. NCBI nr
Match: KAG7010842.1 (Translation initiation factor IF3-1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 960.7 bits (2482), Expect = 5.0e-276
Identity = 489/498 (98.19%), Postives = 494/498 (99.20%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV
Sbjct: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSL+KGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLRKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKASNVVANAKQ AQNGTTSPTSPARSSSPREEEMGPEVDFESSKE
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQTAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360
           TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD
Sbjct: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360

Query: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET 420
           PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSP TRET
Sbjct: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPSTRET 420

Query: 421 RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT 480
           RRYEDNASASRNIKPGPPH+TAP+PSKTSFGIFSSL+ NAPGKQD PATSYRGNQGPPYT
Sbjct: 421 RRYEDNASASRNIKPGPPHSTAPTPSKTSFGIFSSLNTNAPGKQDTPATSYRGNQGPPYT 480

Query: 481 PSTNPDDKGQKSWGVFSK 499
           PSTNP+DKGQKSWGVFSK
Sbjct: 481 PSTNPEDKGQKSWGVFSK 498

[Close]

BLAST of CmoCh20G007390 vs. NCBI nr
Match: KAG6571012.1 (putative ubiquitin-conjugating enzyme E2 23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 957.2 bits (2473), Expect = 5.5e-275
Identity = 487/496 (98.19%), Postives = 492/496 (99.19%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV
Sbjct: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSL+KGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLRKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKASNVVANAKQ AQNGTTSPTSPARSSSPREEEMGPEVDFESSKE
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQTAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360
           TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD
Sbjct: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360

Query: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRET 420
           PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSP TRET
Sbjct: 361 PSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPSTRET 420

Query: 421 RRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPYT 480
           RRYEDNASASRNIKPGPPH+TAP+PSKTSFGIFSSL+ NAPGKQD PATSYRGNQGPPYT
Sbjct: 421 RRYEDNASASRNIKPGPPHSTAPTPSKTSFGIFSSLNTNAPGKQDTPATSYRGNQGPPYT 480

Query: 481 PSTNPDDKGQKSWGVF 497
           PSTNP+DKGQKSWGVF
Sbjct: 481 PSTNPEDKGQKSWGVF 496

[Close]

BLAST of CmoCh20G007390 vs. NCBI nr
Match: XP_023513060.1 (translation initiation factor IF3-1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 945.7 bits (2443), Expect = 1.7e-271
Identity = 483/499 (96.79%), Postives = 491/499 (98.40%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           MAVFCRINQSKLKSLSDQFKRHYFQIS+AASLDSGRITKHV GCVERTIPRRPADCGGNV
Sbjct: 1   MAVFCRINQSKLKSLSDQFKRHYFQISHAASLDSGRITKHVLGCVERTIPRRPADCGGNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVA+VESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAVVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSP-ARSSSPREEEMGPEVDFESSK 300
           VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSP ARSSSPREEE+ PEVDFESSK
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPAARSSSPREEEIDPEVDFESSK 300

Query: 301 ETTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQ 360
           ETTWSVVDGNNDFDEVFDLKDDANGTPS TAA KMNVSDLSQPRGLPDSGRTSSVPLSRQ
Sbjct: 301 ETTWSVVDGNNDFDEVFDLKDDANGTPSNTAAKKMNVSDLSQPRGLPDSGRTSSVPLSRQ 360

Query: 361 DPSIKADNRYKKIEPVNRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRE 420
           DPSIKADNRYKKIEP NRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRE
Sbjct: 361 DPSIKADNRYKKIEPANRFQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRE 420

Query: 421 TRRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPY 480
           TRRYEDNASASRNIKPGPPHNTAP+PSKTSFGIFSSL+ N+PGKQD PA+SYRGNQGPPY
Sbjct: 421 TRRYEDNASASRNIKPGPPHNTAPTPSKTSFGIFSSLNTNSPGKQDTPASSYRGNQGPPY 480

Query: 481 TPSTNPDDKGQKSWGVFSK 499
           TPSTNP+DKGQKSWGVFSK
Sbjct: 481 TPSTNPEDKGQKSWGVFSK 499

[Close]

BLAST of CmoCh20G007390 vs. NCBI nr
Match: XP_022985868.1 (translation initiation factor IF3-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 891.0 bits (2301), Expect = 4.8e-255
Identity = 461/484 (95.25%), Postives = 466/484 (96.28%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKHVFGCVERTIPRRPADCGGNV 60
           M  FCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITK V GCVERTIPRRPA CG NV
Sbjct: 1   MTFFCRINQSKLKSLSDQFKRHYFQISYAASLDSGRITKQVLGCVERTIPRRPAYCGDNV 60

Query: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120
           RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD
Sbjct: 61  RFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARARELNLD 120

Query: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180
           LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL
Sbjct: 121 LVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVALVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLS LSALIEDVA+VESGPRVERGQAYVI
Sbjct: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSHLSALIEDVAVVESGPRVERGQAYVI 240

Query: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEMGPEVDFESSKE 300
           VRHVKFGPSKKGGGGKASNVVANAKQKAQN TTSPTSPARSSSPREE M PEVDFESSKE
Sbjct: 241 VRHVKFGPSKKGGGGKASNVVANAKQKAQNDTTSPTSPARSSSPREEAMDPEVDFESSKE 300

Query: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360
           TTWSVVDGNNDFDEVFDLKDDANGTPSKTAA KMNVSDLSQPRGLPDSGRTSSVPLSRQD
Sbjct: 301 TTWSVVDGNNDFDEVFDLKDDANGTPSKTAAKKMNVSDLSQPRGLPDSGRTSSVPLSRQD 360

Query: 361 PSIKADNRYKKIEPVNR-FQPPNAMGSKGRGAKDSFRSEPEIRDQRRHTPNTDFSPLTRE 420
           PSIKADNRYKKIEP NR FQPPN M SKGRGAKDS +SEP+IRDQRRHTPNT+FSPLTRE
Sbjct: 361 PSIKADNRYKKIEPANRFFQPPNVMDSKGRGAKDSLQSEPQIRDQRRHTPNTNFSPLTRE 420

Query: 421 TRRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSSLSANAPGKQDAPATSYRGNQGPPY 480
           TRRYEDNASASRNIKPGPPHNTAPS SKTSFGIFSSL+ NAPGKQDAPATSYRGNQGPPY
Sbjct: 421 TRRYEDNASASRNIKPGPPHNTAPSSSKTSFGIFSSLNDNAPGKQDAPATSYRGNQGPPY 480

Query: 481 TPST 484
           TPST
Sbjct: 481 TPST 484

[Close]

BLAST of CmoCh20G007390 vs. TAIR 10
Match: AT1G34360.1 (translation initiation factor 3 (IF-3) family protein )

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-45
Identity = 171/527 (32.45%), Postives = 247/527 (46.87%), Query Frame = 0


Query: 1   MAVFCRINQSKLKSLSDQFKRHYF-QISYAASLDSGRITKHV--FGCVERTIPRRPADCG 60
           MA++  IN+S LK  S+Q  R+Y+ Q+  A+S    + T  +  F      I  RP++  
Sbjct: 1   MAIWRIINRSYLKYASNQLTRNYYTQVCLASSTHVVKQTTKLSSFDIPNSDICTRPSNIF 60

Query: 61  GNVRFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTVLKLHEALARAREL 120
            N+RF A     Q + K+ E D+ GPRLN+KI  D+VRLVS++GH V+ L EAL RA+EL
Sbjct: 61  QNLRFLATSA--QTRKKEAEVDSDGPRLNEKITGDYVRLVSEEGHCVVSLREALRRAKEL 120

Query: 121 NLDLVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGKTEE 180
             DLVEVQ  A PPVCKI+ +  E YK+    K+R K+K   +++  D KE+RFT K E 
Sbjct: 121 QCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRP-DIKEIRFTPKIEA 180

Query: 181 KDLRMKADMVKRLMERGYRVKCSARGGED-------QDLGGLLSRLSALIEDVALVESGP 240
           KDL+ K+D   +LME GYRVKC A   +D       + L  LL R +  I D ALVES P
Sbjct: 181 KDLKFKSDQALKLMESGYRVKCLAVPDKDKHKELEPEKLLELLFRFTCFIGD-ALVESWP 240

Query: 241 RVERGQAYVIVRHVKFGPSKKGGGGKASNV-VANAKQKAQN----------GTTSPTSPA 300
             +R  A VIVRH KFGP KKGG     ++ + +A+ K ++           T       
Sbjct: 241 EADRKGAVVIVRHAKFGPPKKGGVKLMKDIDIKSARVKEESPKPDSSKAGVATVDDQEDI 300

Query: 301 RSSSPR-EEEMGPEVDFES--SKETTWSVVDGNNDFDEVFDLKDDANGTPSKTAAMKMNV 360
             S PR   E    V F++  +K    S   G  D         + +  P +      N 
Sbjct: 301 EKSEPRFSVEQAQPVKFQNAYAKREPSSEFSGGRDASRFEPQSPNQHVNPQRPRF--SNQ 360

Query: 361 SDLSQPRGLPDSGRTSSVPLSRQDPSIKADNRYKKIEPVNRFQPPN-AMGSKGRGAKDSF 420
           +   QP G  D  ++ + P S   P         + +P    QPP     ++    + + 
Sbjct: 361 APNQQPTGRFDP-QSPNQPPSAPRPQFPNQQPTGRFDPQFPSQPPRPQFPNQAPNQQSTG 420

Query: 421 RSEPEIRDQRRHTPNTDFSPLTRETRRYEDNASASRNIKPGPPHNTAPSPSKTSFGIFSS 480
           R  P+  +QR   P + F       +    + +   + +  PP     +P++   G F  
Sbjct: 421 RFNPQFPNQRPSPPQSRFPDQAPNQQPSGPSPNRHPDRQGPPPRFQNQAPNQQPTGRFEP 480

Query: 481 LSANAPGKQDAPATSYRGNQGPPYTPSTNPDDKGQKS-----WGVFS 498
              N P     P T       P  T +  P   G+ S     +G+FS
Sbjct: 481 QPPNPPRAPPRPQTRL-----PNETSNEQPTAPGRSSGPASGYGIFS 515

[Close]

BLAST of CmoCh20G007390 vs. TAIR 10
Match: AT4G30690.1 (Translation initiation factor 3 protein )

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-09
Identity = 57/208 (27.40%), Postives = 100/208 (48.08%), Query Frame = 0


Query: 57  GGNVRFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHTV--LKLHEALARA 116
           GG  RF   P   +G+ K+ E D S       I++  VRL+ D  + +  +   EA+ RA
Sbjct: 64  GGGSRF---PGDRRGRQKESEDDDSLD--ISAIRSATVRLIDDQQNMIGLVSKEEAVRRA 123

Query: 117 RELNLDLVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGK 176
            +  LDLV +   A+PPV ++MD+ + +Y+QQ R+K++ K    + L     KE++    
Sbjct: 124 EDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKTTRMDL-----KELKMGYN 183

Query: 177 TEEKDLRMKADMVKRLMERGYRVK----CSARGGEDQDLG-GLLSRLSALIEDVALVESG 236
            ++ D  ++    ++ ++ G +VK       R  E +++   LL R    I ++   ES 
Sbjct: 184 IDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESK 243

Query: 237 PRVERGQAYV------IVRHVKFGPSKK 252
              +R    V      ++R V+  P KK
Sbjct: 244 NFRDRNLFIVLVPNKEVIRKVQEPPPKK 261

[Close]

BLAST of CmoCh20G007390 vs. TAIR 10
Match: AT2G24060.1 (Translation initiation factor 3 protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-05
Identity = 63/251 (25.10%), Postives = 114/251 (45.42%), Query Frame = 0


Query: 57  GGNVRFFAAPVQFQGKAKKEEKDTSGPRLNDKIKADFVRLVSDDGHT--VLKLHEALARA 116
           GG  RF  +    +G+ K+ E D +       I++  VRL+    +   ++   EA+  A
Sbjct: 67  GGGYRF--SGDNRRGRPKEAEIDEALD--ISSIRSATVRLIDGQQNMLGLVSKDEAVRMA 126

Query: 117 RELNLDLVEVQTKANPPVCKIMDFHREKYKQQIREKDRVKSKAELSLKKGDHKEVRFTGK 176
            +  LDLV +   A+PPV K+MD+ + +Y+QQ R+KD+ K    + L     KE++    
Sbjct: 127 DDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKTTRMDL-----KELKMGYN 186

Query: 177 TEEKDLRMKADMVKRLMERGYRVK--CSARGGEDQDLG---GLLSRLSALIEDVALVESG 236
            ++ D  ++    ++ ++ G +VK   S +G E++       LL R    I ++A  ES 
Sbjct: 187 IDQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESK 246

Query: 237 PRVERGQAYVIVRHVKFGPSKKGGGGKASNVVANAKQKAQNGTTSPTSPARSSSPREEEM 296
              +R    ++V      P+K+             K+ A+N  ++  +   +    E E 
Sbjct: 247 NFRDRNMFIILV------PNKEMIRKPQEPPTRKKKKTAENEASASAAEITAEPEPEPEP 302

Query: 297 GPEVDFESSKE 301
            PE + E   E
Sbjct: 307 EPEPEPEPEPE 302

The following BLAST results are available for this feature:

BLAST of CmoCh20G007390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLP2	9.4e-44	32.45	Translation initiation factor IF3-1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
Q5LQ58	1.9e-20	38.95	Translation initiation factor IF-3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DS...	[more]
Q8PJE2	6.8e-18	37.22	Translation initiation factor IF-3 OS=Xanthomonas axonopodis pv. citri (strain 3...	[more]
Q8P7Z3	2.0e-17	36.67	Translation initiation factor IF-3 OS=Xanthomonas campestris pv. campestris (str...	[more]
Q828D2	9.8e-17	34.58	Translation initiation factor IF-3 OS=Streptomyces avermitilis (strain ATCC 3126...	[more]

BLAST of CmoCh20G007390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYA8	9.5e-281	100.00	translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita moschata OX...	[more]
A0A6J1JEV6	2.3e-255	95.25	translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1CFY9	5.3e-207	74.58	translation initiation factor IF3-1, mitochondrial OS=Momordica charantia OX=367...	[more]
A0A6J1I5H4	5.0e-197	71.48	translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1G8E4	3.9e-194	71.56	translation initiation factor IF3-1, mitochondrial-like OS=Cucurbita moschata OX...	[more]

BLAST of CmoCh20G007390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943820.1	2.0e-280	100.00	translation initiation factor IF3-1, mitochondrial-like [Cucurbita moschata]	[more]
KAG7010842.1	5.0e-276	98.19	Translation initiation factor IF3-1, mitochondrial [Cucurbita argyrosperma subsp...	[more]
KAG6571012.1	5.5e-275	98.19	putative ubiquitin-conjugating enzyme E2 23, partial [Cucurbita argyrosperma sub...	[more]
XP_023513060.1	1.7e-271	96.79	translation initiation factor IF3-1, mitochondrial-like [Cucurbita pepo subsp. p...	[more]
XP_022985868.1	4.8e-255	95.25	translation initiation factor IF3-1, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of CmoCh20G007390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34360.1	6.7e-45	32.45	translation initiation factor 3 (IF-3) family protein	[more]
AT4G30690.1	4.5e-09	27.40	Translation initiation factor 3 protein	[more]
AT2G24060.1	1.8e-05	25.10	Translation initiation factor 3 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..127
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..498
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..301
None	No IPR available	PANTHER	PTHR10938:SF4	TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL	coord: 1..498
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	GENE3D	3.30.110.10		coord: 159..247 e-value: 1.5E-11 score: 46.0
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	SUPERFAMILY	55200	Translation initiation factor IF3, C-terminal domain	coord: 166..245
IPR001288	Translation initiation factor 3	TIGRFAM	TIGR00168	TIGR00168	coord: 85..240 e-value: 2.9E-26 score: 90.1
IPR001288	Translation initiation factor 3	PANTHER	PTHR10938	TRANSLATION INITIATION FACTOR IF-3	coord: 1..498
IPR019814	Translation initiation factor 3, N-terminal	PFAM	PF05198	IF3_N	coord: 85..151 e-value: 7.4E-23 score: 80.6
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	GENE3D	3.10.20.80		coord: 76..151 e-value: 1.4E-24 score: 87.9
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	SUPERFAMILY	54364	Translation initiation factor IF3, N-terminal domain	coord: 82..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G007390.1	CmoCh20G007390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032790	ribosome disassembly
biological_process	GO:0006413	translational initiation
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity