CmoCh20G007350 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGCAAGCACGCTACAGCAACAACGAAGGCCAGCCTCACGCTTCTACAGACAATCAGTTCGACAATGGCAGCCACCCTCTCCGTCCGGCCCAACCGCCCTGCCGCCGGTTCACCGTTTCCCTGGCCGCCTTTCCGACGATCCAGTTCAACATTTCTCAGTAGAACCGCTTCCTGGAGTGGCGGCGCCGCTGTTGCCCCGCCTCCACGCCGCGCATTTACAAGGACGCTGCTGCTGCCGGTTCAGGCAACCTCGCGTCCAGACGACTCAGCGCCGTCTAAGATGTCTCTTGAGCACGCACTTAAGCTTCTTGGAGTCTCTGAAGGAGCCTCCTTCGATGAAATACTCCGCGCCAAGAATTCTATTCTTGCTACTTGCAGTGACGATAAGGCGATTGCTCAGGTGGTTTATTGATCGTATTTTGAGTGACGATTTTTTCTTAATTTTGTAAATCCAGTATCTGAGGTCATGCGTTTGATGTCAATTTGGTCGTATTGTAGCTCAATTTTGATATTTTCCGTATCGTTTCTTAATTCGACAAGTGGAATCTTGTAGCGAGTATCAGTAGGTTGCATAATAAGTTCTCTTGGAGTGTAAGTTAATGTTAATTAGACGTTTATAATTCGTTTTCACTATGTTGTTTGAAAAGGCTCATAGAATTTTATCACAAAAAAGGTTCATAGAACATTCTCCGCATGATCTACCCACTTTCCAACTTTTTCACCATTTTACATATTCTGACTTGTAGAAGAGATTTAGAATTCCAATCTGCAACACCCATCGCCAAATATCTACCATATCCATTCTCTGCACACTGCAAGCGTTTCATAAATTTGAAGCATTGCTTTCAATTATTTGTTACATATATAGCCTTTTTTCCGTGCTTTAACCTTCTTTCTAAAATCAAATATGTTTATATTTGGTTTCTCATTCACTGTCGTTCTACCATGATTATCATTTATCACTTCTATGGCATAAGTTATTGCACTTGCTCATTCCATTCTGCTGTTTTGTTAATAATGTATTGGTAAGAAGAGTTATTTTTATTTGGAGTAAAATCCTCTGCCTGGATGCTAAAAGTAAGATATGGTGTATTCTACACTTTTCACAGATGACCAGGGAAAATTGTTACATCAGTGCTACAAGCTTTCTAGCTCCCTGGGTGAATGATTGATTGTCTCGAAGCTTCTAATATTGGCCGCTTGATATTTTTAGCAAATGATGTCATGTGTAATGTTTTATATTATATTTGGAAGGTTTTCTAACTAAAGCACCGAAGCTGTTCGTTGATTCCATCCCATATGTAAACCTTTTCTGCTATTAGAATTTTTTCTCCGTTATAGCTTATATAAGTAGGGAGTTCATTTTCCTTGTTGATATGTTTTGCGTGTTTCAGGTTGAAGCTGCATATGACATGCTGCTTATGCAAAGCTTAACTCGGCGGCGAGCTGGGAAAGTTGAGAACAGTCGCATCCGATATGCTGATGCTAAACCAATAAATTCTCCTGGCTTGGGTTCATCATCTCAGTGGCTGCGGAATATGCCTATTACTGTTGAAGCCCCATCTACTCGTGACTTGGGCATACAAGCTGGTGTATATGGGGCACTAGCAGTCTTGACTTATGTAAATGGAGCTTCTTCATCTTCTTCACTGCCTTATGCAGGTGCTGATGTTCCTGGACTGATCTTGGCAGGTAGCTTTGGAGCTTCCCTGTACTTCATGACCAAAAGGAACGTAAAATTAGGTAAGGAGTTTGACGAAGAAGCCTTATAATACTCTGTTTATAAGTATTGCAATAGTTTGATTCTCATGAACTAGAGAATTCAGCATAGCAATTCATTATGTTTAATATTCTTGTGAAGTCCAAGGATTGGCTGAAGAATAGGATTATATAGCCATGGAGTTATATATTGCCAACGAAAATTGTGGATAAAAAATAGTGAATGTAACTTGATTAGCTTTAACCATAATTTGAAAGATAAAAGTATCTTTTAGATTTATTGCTAAGTTGAAATCTGAGTTACCATGTTTCTATCAGTTGACTAATTGGTTAATGAAAACGTGTTCATTTATCAGTTTAACCTTCTGAACAATGAACTGAATTCGTTTTCTTGATTGAGTGAAAGTTTCTTATAGGGCTCATCTAATAATGATTCTGTTATTAATTCTGTAATCTACTTCTAAATTTTTTTAAGAACAATGTTAATTGGAGCCCAAGTTTTCAGAATTTCACAAGTTGGAACTCTTATTCTTAGAAGAACATATTTGATGCTGATTTTTTTTCCCCTCTTTGCAGGAAAGGCAACGGTGATAACACTAGGTGGCCTTGTGGCTGGTGCAGTAGTGGGGTCTGCAGTTGAGAGTTGGTTGCAGGTTGACGTTGTTCCTTTCCTTGGTGTACACTCCCCTGCTACTGTCGTAAGTGAATTTGTACTTATTTCCCAATTCTTGGTCTCTTTATACCTTAGATAGAGTTGACAGAATCTTGTAGTTTCCCCTTCATTGTAAAAGTTGTAATTATTCAATTGCTCTTTCCCATGTTAGTTCTTTGAAGTTATGTGCTTTTGGATTCAAAAAGCTCAATAGATTGTTGGGAATGACTTGTGTTTATAGTGAAGAATGTAATAACCATCGTATGTTCCCCTTGCTCGATGTTAGTGTTCATAATGCTCTTTATCCATCCGCGTCCATTTGTCCCGATTTCTTTACATACTTTTCATCTGCTCATATTCGTAACTTTTAGATTTTATAGGCTGAGACATGTCACTACTGTAAGGCCCAGGGTGATTCATTTGGTTCAATATGGAGTTTGATGATTACAGACAGTAAAGAAAAAATGGACAGAAGATTGTGAAATTCGTTCATGCTAACCCCGCTCTTCTTCCAGGTTCC AATTTGCAAGCACGCTACAGCAACAACGAAGGCCAGCCTCACGCTTCTACAGACAATCAGTTCGACAATGGCAGCCACCCTCTCCGTCCGGCCCAACCGCCCTGCCGCCGGTTCACCGTTTCCCTGGCCGCCTTTCCGACGATCCAGTTCAACATTTCTCAGTAGAACCGCTTCCTGGAGTGGCGGCGCCGCTGTTGCCCCGCCTCCACGCCGCGCATTTACAAGGACGCTGCTGCTGCCGGTTCAGGCAACCTCGCGTCCAGACGACTCAGCGCCGTCTAAGATGTCTCTTGAGCACGCACTTAAGCTTCTTGGAGTCTCTGAAGGAGCCTCCTTCGATGAAATACTCCGCGCCAAGAATTCTATTCTTGCTACTTGCAGTGACGATAAGGCGATTGCTCAGGTTGAAGCTGCATATGACATGCTGCTTATGCAAAGCTTAACTCGGCGGCGAGCTGGGAAAGTTGAGAACAGTCGCATCCGATATGCTGATGCTAAACCAATAAATTCTCCTGGCTTGGGTTCATCATCTCAGTGGCTGCGGAATATGCCTATTACTGTTGAAGCCCCATCTACTCGTGACTTGGGCATACAAGCTGGTGTATATGGGGCACTAGCAGTCTTGACTTATGTAAATGGAGCTTCTTCATCTTCTTCACTGCCTTATGCAGGTGCTGATGTTCCTGGACTGATCTTGGCAGGTAGCTTTGGAGCTTCCCTGTACTTCATGACCAAAAGGAACGTAAAATTAGGAAAGGCAACGGTGATAACACTAGGTGGCCTTGTGGCTGGTGCAGTAGTGGGGTCTGCAGTTGAGAGTTGGTTGCAGGTTGACGTTGTTCCTTTCCTTGGTGTACACTCCCCTGCTACTGTCGTAAGTGAATTTGTACTTATTTCCCAATTCTTGGTCTCTTTATACCTTAGATAGAGTTGACAGAATCTTGTAGTTTCCCCTTCATTGTAAAAGTTGTAATTATTCAATTGCTCTTTCCCATGTTAGTTCTTTGAAGTTATGTGCTTTTGGATTCAAAAAGCTCAATAGATTGTTGGGAATGACTTGTGTTTATAGTGAAGAATGTAATAACCATCGTATGTTCCCCTTGCTCGATGTTAGTGTTCATAATGCTCTTTATCCATCCGCGTCCATTTGTCCCGATTTCTTTACATACTTTTCATCTGCTCATATTCGTAACTTTTAGATTTTATAGGCTGAGACATGTCACTACTGTAAGGCCCAGGGTGATTCATTTGGTTCAATATGGAGTTTGATGATTACAGACAGTAAAGAAAAAATGGACAGAAGATTGTGAAATTCGTTCATGCTAACCCCGCTCTTCTTCCAGGTTCC ATGGCAGCCACCCTCTCCGTCCGGCCCAACCGCCCTGCCGCCGGTTCACCGTTTCCCTGGCCGCCTTTCCGACGATCCAGTTCAACATTTCTCAGTAGAACCGCTTCCTGGAGTGGCGGCGCCGCTGTTGCCCCGCCTCCACGCCGCGCATTTACAAGGACGCTGCTGCTGCCGGTTCAGGCAACCTCGCGTCCAGACGACTCAGCGCCGTCTAAGATGTCTCTTGAGCACGCACTTAAGCTTCTTGGAGTCTCTGAAGGAGCCTCCTTCGATGAAATACTCCGCGCCAAGAATTCTATTCTTGCTACTTGCAGTGACGATAAGGCGATTGCTCAGGTTGAAGCTGCATATGACATGCTGCTTATGCAAAGCTTAACTCGGCGGCGAGCTGGGAAAGTTGAGAACAGTCGCATCCGATATGCTGATGCTAAACCAATAAATTCTCCTGGCTTGGGTTCATCATCTCAGTGGCTGCGGAATATGCCTATTACTGTTGAAGCCCCATCTACTCGTGACTTGGGCATACAAGCTGGTGTATATGGGGCACTAGCAGTCTTGACTTATGTAAATGGAGCTTCTTCATCTTCTTCACTGCCTTATGCAGGTGCTGATGTTCCTGGACTGATCTTGGCAGGTAGCTTTGGAGCTTCCCTGTACTTCATGACCAAAAGGAACGTAAAATTAGGAAAGGCAACGGTGATAACACTAGGTGGCCTTGTGGCTGGTGCAGTAGTGGGGTCTGCAGTTGAGAGTTGGTTGCAGGTTGACGTTGTTCCTTTCCTTGGTGTACACTCCCCTGCTACTGTCGTAAGTGAATTTGTACTTATTTCCCAATTCTTGGTCTCTTTATACCTTAGATAG MAATLSVRPNRPAAGSPFPWPPFRRSSSTFLSRTASWSGGAAVAPPPRRAFTRTLLLPVQATSRPDDSAPSKMSLEHALKLLGVSEGASFDEILRAKNSILATCSDDKAIAQVEAAYDMLLMQSLTRRRAGKVENSRIRYADAKPINSPGLGSSSQWLRNMPITVEAPSTRDLGIQAGVYGALAVLTYVNGASSSSSLPYAGADVPGLILAGSFGASLYFMTKRNVKLGKATVITLGGLVAGAVVGSAVESWLQVDVVPFLGVHSPATVVSEFVLISQFLVSLYLR Homology
BLAST of CmoCh20G007350 vs. ExPASy Swiss-Prot
Match: G5DBJ0 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CPP1 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.7e-08 Identity = 57/211 (27.01%), Postives = 100/211 (47.39%), Query Frame = 0
BLAST of CmoCh20G007350 vs. ExPASy Swiss-Prot
Match: Q9FN50 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPP1 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05 Identity = 65/240 (27.08%), Postives = 102/240 (42.50%), Query Frame = 0
BLAST of CmoCh20G007350 vs. ExPASy TrEMBL
Match: A0A6J1FUF4 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448892 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 5.3e-151 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh20G007350 vs. ExPASy TrEMBL
Match: A0A6J1JHP7 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484593 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 2.5e-148 Identity = 282/286 (98.60%), Postives = 284/286 (99.30%), Query Frame = 0
BLAST of CmoCh20G007350 vs. ExPASy TrEMBL
Match: A0A6J1J971 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484593 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 9.3e-140 Identity = 265/269 (98.51%), Postives = 267/269 (99.26%), Query Frame = 0
BLAST of CmoCh20G007350 vs. ExPASy TrEMBL
Match: A0A0A0LJI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271400 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.9e-132 Identity = 256/287 (89.20%), Postives = 269/287 (93.73%), Query Frame = 0
BLAST of CmoCh20G007350 vs. ExPASy TrEMBL
Match: A0A6J1I2A1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111469847 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 7.4e-129 Identity = 247/286 (86.36%), Postives = 263/286 (91.96%), Query Frame = 0
BLAST of CmoCh20G007350 vs. NCBI nr
Match: XP_022944441.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita moschata] >KAG7010839.1 Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CmoCh20G007350 vs. NCBI nr
Match: XP_022987024.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 534.6 bits (1376), Expect = 5.1e-148 Identity = 282/286 (98.60%), Postives = 284/286 (99.30%), Query Frame = 0
BLAST of CmoCh20G007350 vs. NCBI nr
Match: XP_023512128.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 513.8 bits (1322), Expect = 9.2e-142 Identity = 270/279 (96.77%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of CmoCh20G007350 vs. NCBI nr
Match: KAG6571009.1 (Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141 Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0
BLAST of CmoCh20G007350 vs. NCBI nr
Match: XP_022987022.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-139 Identity = 265/269 (98.51%), Postives = 267/269 (99.26%), Query Frame = 0
BLAST of CmoCh20G007350 vs. TAIR 10
Match: AT2G20920.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 317.0 bits (811), Expect = 1.5e-86 Identity = 185/290 (63.79%), Postives = 216/290 (74.48%), Query Frame = 0
BLAST of CmoCh20G007350 vs. TAIR 10
Match: AT5G23040.1 (Protein of unknown function (DUF3353) ) HSP 1 Score: 52.0 bits (123), Expect = 9.3e-07 Identity = 65/240 (27.08%), Postives = 102/240 (42.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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