CmoCh20G007040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G007040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr20: 3481994 .. 3483880 (-)
RNA-Seq Expression	CmoCh20G007040
Synteny	CmoCh20G007040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGAGCAACTTCAATGTTGAAGCTTGCTCCCCCTTGGCTTGTTCGGTTTTCTTCAGTATCGGCCTCCTCGTTAGTCGACGAGTTCACGAAATTTTGCTATCAGAGGGATCTTCCACGAGCCATGAAAGCGATGGAAGCGATGCAGAGAAACCGCCTCTGTGCTGATGCAATCACTTACTCCGAGCTTATCAAGTGCTGCCTTGTTCGTGGGGGTGTAGAACAAGGTCGGCTTGTTCATGAGCACGTTTTCTCAAATGGGTACGAACCCAAAACATTCTTGATCAATACTCTGCTTAACATGTATGTGAAATTTGGTCTATTGGATGAAGCCCTGAAGCTGTTCGACGAAATGCCTGACAGAAATGTTGTCTCATGGACGACTATGATATCTGCTTACTCCAATTCCAGTCTTAATCATATGGCTTTAGAGTTTCTTATATTGATGCTTAGGGAAGGCGTTCGACCTAATATGTTTACTTATTCTTCTGTTTTGAGAGCTTGCAATGGTTTGTTGAACCTCAGGCAGCTACATGGTAGTCTAATGAAGGTGGGGTTGGAATCTGATGTCTTTGTAAGGAGTGCTCTGATCGACACTTACTCGAAATTGGGTGAACAGCAAGATGCTTTGAATGTCTTTAACGAGATGGTTACAGGGGATTTGGTTGTTTGGAACTCCATTATTGGTGGTTTAGCTCAGAACAGTGATGGGGATGAAGCTTTACATCTTTATAAGAGAATGAAAAGAGCTGGTTTTGCAGCTGATCAATCTACATTAACTAGCGTCTTGCGAGCCTGCACTGGGCTAGCGCTCTTAGAATTGGGCAGACAAGTCCATGTCCATGTATTAAAGTTTGATCAAGATCTAATCCTAAACAACGCACTTCTTGACATGTATTGCAAATGCGGCAGTCTAGAAGATGCAAACCTTGTTTTCACAAGGACAATGGCAGATAAGGATGTCATCTCATGGAGCACCATGATTGCAGGGTTAGCTCAAAATGGCTTCAGTACAGACGCACTCAAATTGTTTGAATCAATGAAACTTAGAGGGCCAAAACCAAATTACATCACTGTTCTTGGGGTTCTTTTTGCTTGTAGTCATGCAGGGCTTGTCAAAGATGGATGGTACTATTTTCAATCTATGAAGGAGCTTTTCGGGATCGATCCTGGAAGAGAGCACTATGGTTGTATAATCGATCTTCTTGGACGAGCTGGGAAGCTTGATGAAGCTGTGAAGTTGATCCATGAAATGAAGCATGAACCAGATGCAGTAACATGGCGAATCTTGCTTGGTGCTTGCAGAGTCCACAAGAATGTGGATTTAGCCATATATGCTGCTAAAGAAATTCTGAAACTCGATCCTACCGACGCGGGGACGTATATATTGTTATCAAATATTTATGCGAATACTCAGAAATGGGAAGATGTTGCTGAAGTTAGGAGGAGCATGAGAGCCAGGGGAGTGAAGAAAGAACCAGGATGCAGCTGGATTGAAGTGAGCAAACAAGTACATGCCTTTATATTGGGGGACAACTCGCATCCAAGAATAGAAGACATAAAGAGGGAGATCAGCCGAGTAATCCAAAGATTAGTGTCAGTGGGCTATGTTCCTGATACAAATTTTGTGCTGCAGGATCTTGAGGGAGAACAGATGGAGGACTCCCTTCAATATCACAGCGAGAAACTGGCAATTGTGTTTGGTTTGATGAGTTTGCCAAAGGAGAAGACCATTCGAATTAGGAAAAACCTTAGAATCTGTGGGGACTGTCATCTCTTTGCAAAGCTTGTCGCGCAGTTGGAGAATCGAGTCATCGTCATTCGAGATCCCATCAGGTACCATCATTTTCAGGAAGGTTTATGCTCTTGTGGTGATTACTGGTGA

mRNA sequence

ATGAGAAGAGCAACTTCAATGTTGAAGCTTGCTCCCCCTTGGCTTGTTCGGTTTTCTTCAGTATCGGCCTCCTCGTTAGTCGACGAGTTCACGAAATTTTGCTATCAGAGGGATCTTCCACGAGCCATGAAAGCGATGGAAGCGATGCAGAGAAACCGCCTCTGTGCTGATGCAATCACTTACTCCGAGCTTATCAAGTGCTGCCTTGTTCGTGGGGGTGTAGAACAAGGTCGGCTTGTTCATGAGCACGTTTTCTCAAATGGGTACGAACCCAAAACATTCTTGATCAATACTCTGCTTAACATGTATGTGAAATTTGGTCTATTGGATGAAGCCCTGAAGCTGTTCGACGAAATGCCTGACAGAAATGTTGTCTCATGGACGACTATGATATCTGCTTACTCCAATTCCAGTCTTAATCATATGGCTTTAGAGTTTCTTATATTGATGCTTAGGGAAGGCGTTCGACCTAATATGTTTACTTATTCTTCTGTTTTGAGAGCTTGCAATGGTTTGTTGAACCTCAGGCAGCTACATGGTAGTCTAATGAAGGTGGGGTTGGAATCTGATGTCTTTGTAAGGAGTGCTCTGATCGACACTTACTCGAAATTGGGTGAACAGCAAGATGCTTTGAATGTCTTTAACGAGATGGTTACAGGGGATTTGGTTGTTTGGAACTCCATTATTGGTGGTTTAGCTCAGAACAGTGATGGGGATGAAGCTTTACATCTTTATAAGAGAATGAAAAGAGCTGGTTTTGCAGCTGATCAATCTACATTAACTAGCGTCTTGCGAGCCTGCACTGGGCTAGCGCTCTTAGAATTGGGCAGACAAGTCCATGTCCATGTATTAAAGTTTGATCAAGATCTAATCCTAAACAACGCACTTCTTGACATGTATTGCAAATGCGGCAGTCTAGAAGATGCAAACCTTGTTTTCACAAGGACAATGGCAGATAAGGATGTCATCTCATGGAGCACCATGATTGCAGGGTTAGCTCAAAATGGCTTCAGTACAGACGCACTCAAATTGTTTGAATCAATGAAACTTAGAGGGCCAAAACCAAATTACATCACTGTTCTTGGGGTTCTTTTTGCTTGTAGTCATGCAGGGCTTGTCAAAGATGGATGGTACTATTTTCAATCTATGAAGGAGCTTTTCGGGATCGATCCTGGAAGAGAGCACTATGGTTGTATAATCGATCTTCTTGGACGAGCTGGGAAGCTTGATGAAGCTGTGAAGTTGATCCATGAAATGAAGCATGAACCAGATGCAGTAACATGGCGAATCTTGCTTGGTGCTTGCAGAGTCCACAAGAATGTGGATTTAGCCATATATGCTGCTAAAGAAATTCTGAAACTCGATCCTACCGACGCGGGGACGTATATATTGTTATCAAATATTTATGCGAATACTCAGAAATGGGAAGATGTTGCTGAAGTTAGGAGGAGCATGAGAGCCAGGGGAGTGAAGAAAGAACCAGGATGCAGCTGGATTGAAGTGAGCAAACAAGTACATGCCTTTATATTGGGGGACAACTCGCATCCAAGAATAGAAGACATAAAGAGGGAGATCAGCCGAGTAATCCAAAGATTAGTGTCAGTGGGCTATGTTCCTGATACAAATTTTGTGCTGCAGGATCTTGAGGGAGAACAGATGGAGGACTCCCTTCAATATCACAGCGAGAAACTGGCAATTGTGTTTGGTTTGATGAGTTTGCCAAAGGAGAAGACCATTCGAATTAGGAAAAACCTTAGAATCTGTGGGGACTGTCATCTCTTTGCAAAGCTTGTCGCGCAGTTGGAGAATCGAGTCATCGTCATTCGAGATCCCATCAGGTACCATCATTTTCAGGAAGGTTTATGCTCTTGTGGTGATTACTGGTGA

Coding sequence (CDS)

ATGAGAAGAGCAACTTCAATGTTGAAGCTTGCTCCCCCTTGGCTTGTTCGGTTTTCTTCAGTATCGGCCTCCTCGTTAGTCGACGAGTTCACGAAATTTTGCTATCAGAGGGATCTTCCACGAGCCATGAAAGCGATGGAAGCGATGCAGAGAAACCGCCTCTGTGCTGATGCAATCACTTACTCCGAGCTTATCAAGTGCTGCCTTGTTCGTGGGGGTGTAGAACAAGGTCGGCTTGTTCATGAGCACGTTTTCTCAAATGGGTACGAACCCAAAACATTCTTGATCAATACTCTGCTTAACATGTATGTGAAATTTGGTCTATTGGATGAAGCCCTGAAGCTGTTCGACGAAATGCCTGACAGAAATGTTGTCTCATGGACGACTATGATATCTGCTTACTCCAATTCCAGTCTTAATCATATGGCTTTAGAGTTTCTTATATTGATGCTTAGGGAAGGCGTTCGACCTAATATGTTTACTTATTCTTCTGTTTTGAGAGCTTGCAATGGTTTGTTGAACCTCAGGCAGCTACATGGTAGTCTAATGAAGGTGGGGTTGGAATCTGATGTCTTTGTAAGGAGTGCTCTGATCGACACTTACTCGAAATTGGGTGAACAGCAAGATGCTTTGAATGTCTTTAACGAGATGGTTACAGGGGATTTGGTTGTTTGGAACTCCATTATTGGTGGTTTAGCTCAGAACAGTGATGGGGATGAAGCTTTACATCTTTATAAGAGAATGAAAAGAGCTGGTTTTGCAGCTGATCAATCTACATTAACTAGCGTCTTGCGAGCCTGCACTGGGCTAGCGCTCTTAGAATTGGGCAGACAAGTCCATGTCCATGTATTAAAGTTTGATCAAGATCTAATCCTAAACAACGCACTTCTTGACATGTATTGCAAATGCGGCAGTCTAGAAGATGCAAACCTTGTTTTCACAAGGACAATGGCAGATAAGGATGTCATCTCATGGAGCACCATGATTGCAGGGTTAGCTCAAAATGGCTTCAGTACAGACGCACTCAAATTGTTTGAATCAATGAAACTTAGAGGGCCAAAACCAAATTACATCACTGTTCTTGGGGTTCTTTTTGCTTGTAGTCATGCAGGGCTTGTCAAAGATGGATGGTACTATTTTCAATCTATGAAGGAGCTTTTCGGGATCGATCCTGGAAGAGAGCACTATGGTTGTATAATCGATCTTCTTGGACGAGCTGGGAAGCTTGATGAAGCTGTGAAGTTGATCCATGAAATGAAGCATGAACCAGATGCAGTAACATGGCGAATCTTGCTTGGTGCTTGCAGAGTCCACAAGAATGTGGATTTAGCCATATATGCTGCTAAAGAAATTCTGAAACTCGATCCTACCGACGCGGGGACGTATATATTGTTATCAAATATTTATGCGAATACTCAGAAATGGGAAGATGTTGCTGAAGTTAGGAGGAGCATGAGAGCCAGGGGAGTGAAGAAAGAACCAGGATGCAGCTGGATTGAAGTGAGCAAACAAGTACATGCCTTTATATTGGGGGACAACTCGCATCCAAGAATAGAAGACATAAAGAGGGAGATCAGCCGAGTAATCCAAAGATTAGTGTCAGTGGGCTATGTTCCTGATACAAATTTTGTGCTGCAGGATCTTGAGGGAGAACAGATGGAGGACTCCCTTCAATATCACAGCGAGAAACTGGCAATTGTGTTTGGTTTGATGAGTTTGCCAAAGGAGAAGACCATTCGAATTAGGAAAAACCTTAGAATCTGTGGGGACTGTCATCTCTTTGCAAAGCTTGTCGCGCAGTTGGAGAATCGAGTCATCGTCATTCGAGATCCCATCAGGTACCATCATTTTCAGGAAGGTTTATGCTCTTGTGGTGATTACTGGTGA

Protein sequence

MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGLCSCGDYW

Homology

[Close]

BLAST of CmoCh20G007040 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 3.2e-267
Identity = 432/631 (68.46%), Postives = 533/631 (84.47%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLV---RFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCAD 60
           M+   S +KL  P +     +SS   + L+ EFT+ CYQRDLPRAMKAM+++Q + L AD
Sbjct: 1   MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60

Query: 61  AITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFD 120
           + TYSELIKCC+    V +G L+  H++ NG+ P  FL+N L+NMYVKF LL++A +LFD
Sbjct: 61  SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120

Query: 121 EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQ 180
           +MP RNV+SWTTMISAYS   ++  ALE L+LMLR+ VRPN++TYSSVLR+CNG+ ++R 
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM 180

Query: 181 LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSD 240
           LH  ++K GLESDVFVRSALID ++KLGE +DAL+VF+EMVTGD +VWNSIIGG AQNS 
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240

Query: 241 GDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL 300
            D AL L+KRMKRAGF A+Q+TLTSVLRACTGLALLELG Q HVH++K+DQDLILNNAL+
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV 300

Query: 301 DMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNY 360
           DMYCKCGSLEDA  VF + M ++DVI+WSTMI+GLAQNG+S +ALKLFE MK  G KPNY
Sbjct: 301 DMYCKCGSLEDALRVFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 360

Query: 361 ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIH 420
           IT++GVLFACSHAGL++DGWYYF+SMK+L+GIDP REHYGC+IDLLG+AGKLD+AVKL++
Sbjct: 361 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 420

Query: 421 EMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWED 480
           EM+ EPDAVTWR LLGACRV +N+ LA YAAK+++ LDP DAGTY LLSNIYAN+QKW+ 
Sbjct: 421 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 480

Query: 481 VAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGY 540
           V E+R  MR RG+KKEPGCSWIEV+KQ+HAFI+GDNSHP+I ++ ++++++I RL  +GY
Sbjct: 481 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 540

Query: 541 VPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKL 600
           VP+TNFVLQDLEGEQMEDSL++HSEKLA+ FGLM+LP EK IRIRKNLRICGDCH+F KL
Sbjct: 541 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 600

Query: 601 VAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
            ++LE R IVIRDPIRYHHFQ+G CSCGDYW
Sbjct: 601 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]

BLAST of CmoCh20G007040 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 8.8e-148
Identity = 257/582 (44.16%), Postives = 373/582 (64.09%), Query Frame = 0


Query: 56  ADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKL 115
           AD   Y+ L+K C V   + QGR+VH H+  + +     + NTLLNMY K G L+EA K+
Sbjct: 58  ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 116 FDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRA------- 175
           F++MP R+ V+WTT+IS YS       AL F   MLR G  PN FT SSV++A       
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 176 CNGLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSI 235
           C G     QLHG  +K G +S+V V SAL+D Y++ G   DA  VF+ + + + V WN++
Sbjct: 178 CCG----HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 237

Query: 236 IGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQ 295
           I G A+ S  ++AL L++ M R GF     +  S+  AC+    LE G+ VH +++K  +
Sbjct: 238 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 297

Query: 296 DLI--LNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFE 355
            L+    N LLDMY K GS+ DA  +F R +A +DV+SW++++   AQ+GF  +A+  FE
Sbjct: 298 KLVAFAGNTLLDMYAKSGSIHDARKIFDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 357

Query: 356 SMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRA 415
            M+  G +PN I+ L VL ACSH+GL+ +GW+Y++ MK+  GI P   HY  ++DLLGRA
Sbjct: 358 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRA 417

Query: 416 GKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLS 475
           G L+ A++ I EM  EP A  W+ LL ACR+HKN +L  YAA+ + +LDP D G +++L 
Sbjct: 418 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 477

Query: 476 NIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREIS 535
           NIYA+  +W D A VR+ M+  GVKKEP CSW+E+   +H F+  D  HP+ E+I R+  
Sbjct: 478 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 537

Query: 536 RVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLR 595
            V+ ++  +GYVPDT+ V+  ++ ++ E +LQYHSEK+A+ F L++ P   TI I+KN+R
Sbjct: 538 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 597

Query: 596 ICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           +CGDCH   KL +++  R I++RD  R+HHF++G CSC DYW
Sbjct: 598 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

[Close]

BLAST of CmoCh20G007040 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 483.4 bits (1243), Expect = 3.9e-135
Identity = 229/596 (38.42%), Postives = 359/596 (60.23%), Query Frame = 0


Query: 38   DLPRAMKAMEAMQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
            DL  + +    MQ   +  +  TY  ++K C+  G +E G  +H  +    ++   ++ +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 98   TLLNMYVKFGLLDEALKLFDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRP 157
             L++MY K G LD A  +      ++VVSWTTMI+ Y+  + +  AL     ML  G+R 
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 158  NMFTYSSVLRACNGLLNLR---QLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVF 217
            +    ++ + AC GL  L+   Q+H      G  SD+  ++AL+  YS+ G+ +++   F
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 218  NEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLE 277
             +   GD + WN+++ G  Q+ + +EAL ++ RM R G   +  T  S ++A +  A ++
Sbjct: 650  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 278  LGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGL 337
             G+QVH  + K  +D +  + NAL+ MY KCGS+ DA   F   ++ K+ +SW+ +I   
Sbjct: 710  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE-VSTKNEVSWNAIINAY 769

Query: 338  AQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPG 397
            +++GF ++AL  F+ M     +PN++T++GVL ACSH GLV  G  YF+SM   +G+ P 
Sbjct: 770  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 829

Query: 398  REHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL 457
             EHY C++D+L RAG L  A + I EM  +PDA+ WR LL AC VHKN+++  +AA  +L
Sbjct: 830  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 889

Query: 458  KLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGD 517
            +L+P D+ TY+LLSN+YA ++KW+     R+ M+ +GVKKEPG SWIEV   +H+F +GD
Sbjct: 890  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 949

Query: 518  NSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMS 577
             +HP  ++I      + +R   +GYV D   +L +L+ EQ +  +  HSEKLAI FGL+S
Sbjct: 950  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1009

Query: 578  LPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
            LP    I + KNLR+C DCH + K V+++ NR I++RD  R+HHF+ G CSC DYW
Sbjct: 1010 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]

BLAST of CmoCh20G007040 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 6.6e-135
Identity = 235/587 (40.03%), Postives = 374/587 (63.71%), Query Frame = 0


Query: 49  MQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGL 108
           MQ  R+  D+ T+  L+K C     ++ GR VH  VF  G++   F+ N L+ +Y K   
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169

Query: 109 LDEALKLFD--EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVL 168
           L  A  +F+   +P+R +VSWT ++SAY+ +     ALE    M +  V+P+     SVL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229

Query: 169 RACNGLLNLRQ---LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLV 228
            A   L +L+Q   +H S++K+GLE +  +  +L   Y+K G+   A  +F++M + +L+
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289

Query: 229 VWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHV 288
           +WN++I G A+N    EA+ ++  M       D  ++TS + AC  +  LE  R ++ +V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349

Query: 289 LKFD--QDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDA 348
            + D   D+ +++AL+DM+ KCGS+E A LVF RT+ D+DV+ WS MI G   +G + +A
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSAMIVGYGLHGRAREA 409

Query: 349 LKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIID 408
           + L+ +M+  G  PN +T LG+L AC+H+G+V++GW++F  M +   I+P ++HY C+ID
Sbjct: 410 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVID 469

Query: 409 LLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGT 468
           LLGRAG LD+A ++I  M  +P    W  LL AC+ H++V+L  YAA+++  +DP++ G 
Sbjct: 470 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 529

Query: 469 YILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDI 528
           Y+ LSN+YA  + W+ VAEVR  M+ +G+ K+ GCSW+EV  ++ AF +GD SHPR E+I
Sbjct: 530 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 589

Query: 529 KREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRI 588
           +R++  +  RL   G+V + +  L DL  E+ E++L  HSE++AI +GL+S P+   +RI
Sbjct: 590 ERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRI 649

Query: 589 RKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
            KNLR C +CH   KL+++L +R IV+RD  R+HHF++G+CSCGDYW
Sbjct: 650 TKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of CmoCh20G007040 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.4e-129
Identity = 243/607 (40.03%), Postives = 376/607 (61.94%), Query Frame = 0


Query: 38  DLPRAMKAMEAMQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
           D   A+ A  +M++  L     ++   IK C     +  G+  H+  F  GY+   F+ +
Sbjct: 56  DSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSS 115

Query: 98  TLLNMYVKFGLLDEALKLFDEMPDRNVVSWTTMISAY--SNSSLNHMALEFLILMLREGV 157
            L+ MY   G L++A K+FDE+P RN+VSWT+MI  Y  + ++L+ ++L   +L+     
Sbjct: 116 ALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD 175

Query: 158 RPNMFTYS----SVLRACN-----GLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGE 217
              MF  S    SV+ AC+     GL     +H  ++K G +  V V + L+D Y+K GE
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGL--TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 235

Query: 218 QQDAL--NVFNEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRM-KRAGFAADQSTLTSV 277
              A+   +F+++V  D V +NSI+   AQ+   +EA  +++R+ K      +  TL++V
Sbjct: 236 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 295

Query: 278 LRACTGLALLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKD 337
           L A +    L +G+ +H  V++   + D+I+  +++DMYCKCG +E A   F R M +K+
Sbjct: 296 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR-MKNKN 355

Query: 338 VISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQ 397
           V SW+ MIAG   +G +  AL+LF +M   G +PNYIT + VL ACSHAGL  +GW +F 
Sbjct: 356 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 415

Query: 398 SMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNV 457
           +MK  FG++PG EHYGC++DLLGRAG L +A  LI  MK +PD++ W  LL ACR+HKNV
Sbjct: 416 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 475

Query: 458 DLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEV 517
           +LA  +   + +LD ++ G Y+LLS+IYA+  +W+DV  VR  M+ RG+ K PG S +E+
Sbjct: 476 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 535

Query: 518 SKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHS 577
           + +VH F++GD  HP+ E I   ++ + ++L+  GYV +T+ V  D++ E+ E +L+ HS
Sbjct: 536 NGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHS 595

Query: 578 EKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGL 629
           EKLAI FG+M+     T+ + KNLR+C DCH   KL++++ +R  V+RD  R+HHF++G 
Sbjct: 596 EKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGG 655

[Close]

BLAST of CmoCh20G007040 vs. ExPASy TrEMBL
Match: A0A6J1FWY5 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448222 PE=3 SV=1)

HSP 1 Score: 1274.2 bits (3296), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHFQEGLCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 628

[Close]

BLAST of CmoCh20G007040 vs. ExPASy TrEMBL
Match: A0A6J1JFJ7 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484572 PE=3 SV=1)

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 620/628 (98.73%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRL ADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRGG+EQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEA KLFDEMP
Sbjct: 61  YSELIKCCLVRGGIEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLR CNGLLNLRQLH 
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRDCNGLLNLRQLHA 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSK GEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKFGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHFQEG+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]

BLAST of CmoCh20G007040 vs. ExPASy TrEMBL
Match: A0A0A0KCS7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G117760 PE=3 SV=1)

HSP 1 Score: 1159.8 bits (2999), Expect = 0.0e+00
Identity = 564/628 (89.81%), Postives = 593/628 (94.43%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATS+L  AP     F SVSA SLVDEFTKFCYQRDLPRAMKAMEAM RNRL ADAIT
Sbjct: 1   MRRATSILNHAP----TFCSVSAHSLVDEFTKFCYQRDLPRAMKAMEAMHRNRLSADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRG V+Q RLVHEHVFSNGYEPKTFLINTL+NMYVKFGLLDEA  LFDEMP
Sbjct: 61  YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNS+LNH AL+FLILMLREGVRPNM+TYSSVLRAC+GLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           S++KVGLESDVFVRSALIDTYSKLGEQ DALNVFNEM+TGDLVVWNSIIGG AQNSDGDE
Sbjct: 181 SILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
            LHLYKRMKRA F ADQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDMY
Sbjct: 241 TLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANL+FTR M +KDVISWSTMIAGLAQNGFS DALKLFE+MK +GPKPNYIT+
Sbjct: 301 CKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITI 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMKE FGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMN 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILLSNIYAN+QKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRR MR RGVKK+PGCSWIEVSKQVHAFILGDNSHPRIE+IKRE+S++IQRL+ +GYVPD
Sbjct: 481 VRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLV+Q
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHF+ G+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFRGGVCSCGDYW 624

[Close]

BLAST of CmoCh20G007040 vs. ExPASy TrEMBL
Match: A0A5D3BPB2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00500 PE=3 SV=1)

HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 562/628 (89.49%), Postives = 590/628 (93.95%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATS+   AP       SVSA SLVDEFTKFCYQRDLPRAMKAMEAM RNRL ADAIT
Sbjct: 1   MRRATSIFNHAP----AICSVSAHSLVDEFTKFCYQRDLPRAMKAMEAMHRNRLSADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRG V+QGRLVHEHVFSNGYEPKTFLINTL+NMYVKFGLLDEA  LFDEMP
Sbjct: 61  YSELIKCCLVRGAVQQGRLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNS+LNH ALEFLILMLREGVRPNMFTYSSVLRAC+GLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSNLNHKALEFLILMLREGVRPNMFTYSSVLRACDGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           S+MKVGLESDVFVRSALIDTYSKLG Q DALNVFNEM+TGDLVVWNSIIGG AQNSDGDE
Sbjct: 181 SIMKVGLESDVFVRSALIDTYSKLGAQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           A++LYKRMKRAGF ADQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDMY
Sbjct: 241 AVNLYKRMKRAGFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANL+F R M +KDVISWSTMIAGLAQNGFS DALKLFESMK +GPKPNYIT+
Sbjct: 301 CKCGSLEDANLLFNRMMTEKDVISWSTMIAGLAQNGFSADALKLFESMKSKGPKPNYITI 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMK+ FGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKQHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMN 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILL+NIYAN+QKWED AE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLANIYANSQKWEDAAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRR M  RGVKK+PGCSWIEVSKQVHAFILGDNSHPRIE+IKRE+S++IQ+L+ VGYVPD
Sbjct: 481 VRRKMGTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQKLMRVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHF+ G+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFRGGVCSCGDYW 624

[Close]

BLAST of CmoCh20G007040 vs. ExPASy TrEMBL
Match: A0A1S3BIG6 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490447 PE=3 SV=1)

HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 562/628 (89.49%), Postives = 590/628 (93.95%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATS+   AP       SVSA SLVDEFTKFCYQRDLPRAMKAMEAM RNRL ADAIT
Sbjct: 1   MRRATSIFNHAP----AICSVSAHSLVDEFTKFCYQRDLPRAMKAMEAMHRNRLSADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRG V+QGRLVHEHVFSNGYEPKTFLINTL+NMYVKFGLLDEA  LFDEMP
Sbjct: 61  YSELIKCCLVRGAVQQGRLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNS+LNH ALEFLILMLREGVRPNMFTYSSVLRAC+GLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSNLNHKALEFLILMLREGVRPNMFTYSSVLRACDGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           S+MKVGLESDVFVRSALIDTYSKLG Q DALNVFNEM+TGDLVVWNSIIGG AQNSDGDE
Sbjct: 181 SIMKVGLESDVFVRSALIDTYSKLGAQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           A++LYKRMKRAGF ADQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDMY
Sbjct: 241 AVNLYKRMKRAGFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANL+F R M +KDVISWSTMIAGLAQNGFS DALKLFESMK +GPKPNYIT+
Sbjct: 301 CKCGSLEDANLLFNRMMTEKDVISWSTMIAGLAQNGFSADALKLFESMKSKGPKPNYITI 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMK+ FGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKQHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMN 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILL+NIYAN+QKWED AE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLANIYANSQKWEDAAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRR M  RGVKK+PGCSWIEVSKQVHAFILGDNSHPRIE+IKRE+S++IQ+L+ VGYVPD
Sbjct: 481 VRRKMGTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQKLMRVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHF+ G+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFRGGVCSCGDYW 624

[Close]

BLAST of CmoCh20G007040 vs. NCBI nr
Match: XP_022943463.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1274.2 bits (3296), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHFQEGLCSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 628

[Close]

BLAST of CmoCh20G007040 vs. NCBI nr
Match: KAG6570970.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010808.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 625/628 (99.52%), Postives = 626/628 (99.68%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRL ADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEA KLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHFQEG+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]

BLAST of CmoCh20G007040 vs. NCBI nr
Match: XP_023512954.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1260.7 bits (3261), Expect = 0.0e+00
Identity = 622/628 (99.04%), Postives = 624/628 (99.36%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRL ADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEA KLFDEMP
Sbjct: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLH 
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHA 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SL KVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLTKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFE+MKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFEAMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHFQEG+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]

BLAST of CmoCh20G007040 vs. NCBI nr
Match: XP_022986985.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 620/628 (98.73%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAIT 60
           MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRL ADAIT
Sbjct: 1   MRRATSMLKLAPPWLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLWADAIT 60

Query: 61  YSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEMP 120
           YSELIKCCLVRGG+EQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEA KLFDEMP
Sbjct: 61  YSELIKCCLVRGGIEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEAQKLFDEMP 120

Query: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLHG 180
           DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLR CNGLLNLRQLH 
Sbjct: 121 DRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRDCNGLLNLRQLHA 180

Query: 181 SLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240
           SLMKVGLESDVFVRSALIDTYSK GEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE
Sbjct: 181 SLMKVGLESDVFVRSALIDTYSKFGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGDE 240

Query: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300
           ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY
Sbjct: 241 ALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDMY 300

Query: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360
           CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV
Sbjct: 301 CKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITV 360

Query: 361 LGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420
           LGVLFACSHAGLV DGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK
Sbjct: 361 LGVLFACSHAGLVNDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMK 420

Query: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480
           HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE
Sbjct: 421 HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAE 480

Query: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540
           VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD
Sbjct: 481 VRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPD 540

Query: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600
           TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ
Sbjct: 541 TNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQ 600

Query: 601 LENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           LENRVIVIRDPIRYHHFQEG+CSCGDYW
Sbjct: 601 LENRVIVIRDPIRYHHFQEGVCSCGDYW 628

[Close]

BLAST of CmoCh20G007040 vs. NCBI nr
Match: XP_038876633.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876634.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876635.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876636.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876637.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876638.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876639.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida] >XP_038876640.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa hispida])

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 569/629 (90.46%), Postives = 596/629 (94.75%), Query Frame = 0


Query: 1   MRRATSMLKLAPP-WLVRFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCADAI 60
           MRRAT +LKL PP WL RF SVSA SLVDEFTKFCYQRDLPRAMK MEAMQRN L ADAI
Sbjct: 1   MRRATLLLKLTPPIWLFRFCSVSAYSLVDEFTKFCYQRDLPRAMKTMEAMQRNCLYADAI 60

Query: 61  TYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFDEM 120
           TYSELIKCCL+RG VEQGRLVHEHVFSNGYE KTFLINTLLNMYVKFGLLDEA  LFDEM
Sbjct: 61  TYSELIKCCLLRGAVEQGRLVHEHVFSNGYEAKTFLINTLLNMYVKFGLLDEAQNLFDEM 120

Query: 121 PDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQLH 180
            DRNVVSWTTMISAYS+S+LNH ALEFLILM REGVRPNMFTYSSVLRAC+GLLNLRQLH
Sbjct: 121 LDRNVVSWTTMISAYSSSNLNHKALEFLILMFREGVRPNMFTYSSVLRACDGLLNLRQLH 180

Query: 181 GSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSDGD 240
           GS+MKVGLESD+FVRSALID YSK+GEQ+DALNVFNEMVT DLVVWNSIIGG AQNSDGD
Sbjct: 181 GSIMKVGLESDIFVRSALIDAYSKMGEQRDALNVFNEMVTSDLVVWNSIIGGFAQNSDGD 240

Query: 241 EALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALLDM 300
           EAL LYKRMKRAGFA DQSTLTSVLRACTGLALLELGRQVHVHVLK+DQDLILNNALLDM
Sbjct: 241 EALRLYKRMKRAGFAVDQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDM 300

Query: 301 YCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYIT 360
           YCKCGSLEDANLVFTR M +KDVISWSTMIAGLAQNGFSTDALKLFESMK +GPKPNYIT
Sbjct: 301 YCKCGSLEDANLVFTRRMTEKDVISWSTMIAGLAQNGFSTDALKLFESMKSKGPKPNYIT 360

Query: 361 VLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 420
           VLGVLFACSHAGLV DGWYYF+SMKELFGIDPGREHYGC+IDLLGRAGKLDEAVKLIHEM
Sbjct: 361 VLGVLFACSHAGLVNDGWYYFKSMKELFGIDPGREHYGCMIDLLGRAGKLDEAVKLIHEM 420

Query: 421 KHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVA 480
            HEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP DAGTYILLSNIYAN+QKWEDV 
Sbjct: 421 NHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPFDAGTYILLSNIYANSQKWEDVT 480

Query: 481 EVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVP 540
           EVR  MRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRI++IKRE+S++IQRL+ VGYVP
Sbjct: 481 EVRSRMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIKEIKRELSQLIQRLMRVGYVP 540

Query: 541 DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVA 600
           DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP +KTI IRKNLRICGDCH+FAKLV+
Sbjct: 541 DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVS 600

Query: 601 QLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
           QLENRVIVIRDPIRYHHF++G+CSCGDYW
Sbjct: 601 QLENRVIVIRDPIRYHHFRDGVCSCGDYW 629

[Close]

BLAST of CmoCh20G007040 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 922.2 bits (2382), Expect = 2.3e-268
Identity = 432/631 (68.46%), Postives = 533/631 (84.47%), Query Frame = 0


Query: 1   MRRATSMLKLAPPWLV---RFSSVSASSLVDEFTKFCYQRDLPRAMKAMEAMQRNRLCAD 60
           M+   S +KL  P +     +SS   + L+ EFT+ CYQRDLPRAMKAM+++Q + L AD
Sbjct: 1   MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60

Query: 61  AITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKLFD 120
           + TYSELIKCC+    V +G L+  H++ NG+ P  FL+N L+NMYVKF LL++A +LFD
Sbjct: 61  SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120

Query: 121 EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRACNGLLNLRQ 180
           +MP RNV+SWTTMISAYS   ++  ALE L+LMLR+ VRPN++TYSSVLR+CNG+ ++R 
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM 180

Query: 181 LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSIIGGLAQNSD 240
           LH  ++K GLESDVFVRSALID ++KLGE +DAL+VF+EMVTGD +VWNSIIGG AQNS 
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240

Query: 241 GDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALL 300
            D AL L+KRMKRAGF A+Q+TLTSVLRACTGLALLELG Q HVH++K+DQDLILNNAL+
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV 300

Query: 301 DMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNY 360
           DMYCKCGSLEDA  VF + M ++DVI+WSTMI+GLAQNG+S +ALKLFE MK  G KPNY
Sbjct: 301 DMYCKCGSLEDALRVFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 360

Query: 361 ITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIH 420
           IT++GVLFACSHAGL++DGWYYF+SMK+L+GIDP REHYGC+IDLLG+AGKLD+AVKL++
Sbjct: 361 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 420

Query: 421 EMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWED 480
           EM+ EPDAVTWR LLGACRV +N+ LA YAAK+++ LDP DAGTY LLSNIYAN+QKW+ 
Sbjct: 421 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 480

Query: 481 VAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGY 540
           V E+R  MR RG+KKEPGCSWIEV+KQ+HAFI+GDNSHP+I ++ ++++++I RL  +GY
Sbjct: 481 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 540

Query: 541 VPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKL 600
           VP+TNFVLQDLEGEQMEDSL++HSEKLA+ FGLM+LP EK IRIRKNLRICGDCH+F KL
Sbjct: 541 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 600

Query: 601 VAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
            ++LE R IVIRDPIRYHHFQ+G CSCGDYW
Sbjct: 601 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]

BLAST of CmoCh20G007040 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 506.5 bits (1303), Expect = 3.0e-143
Identity = 250/573 (43.63%), Postives = 366/573 (63.87%), Query Frame = 0


Query: 56  ADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGLLDEALKL 115
           AD   Y+ L+K C V   + QGR+VH H+  + +     + NTLLNMY K G L+EA K+
Sbjct: 58  ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 116 FDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVLRA------- 175
           F++MP R+ V+WTT+IS YS       AL F   MLR G  PN FT SSV++A       
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 176 CNGLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLVVWNSI 235
           C G     QLHG  +K G +S+V V SAL+D Y++ G   DA  VF+ + + + V WN++
Sbjct: 178 CCG----HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 237

Query: 236 IGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHVLKFDQ 295
           I G A+ S  ++AL L++ M R GF     +  S+  AC+    LE G+ VH +++K  +
Sbjct: 238 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 297

Query: 296 DLI--LNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDALKLFE 355
            L+    N LLDMY K GS+ DA  +F R +A +DV+SW++++   AQ+GF  +A+  FE
Sbjct: 298 KLVAFAGNTLLDMYAKSGSIHDARKIFDR-LAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 357

Query: 356 SMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIIDLLGRA 415
            M+  G +PN I+ L VL ACSH+GL+ +GW+Y++ MK+  GI P   HY  ++DLLGRA
Sbjct: 358 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRA 417

Query: 416 GKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGTYILLS 475
           G L+ A++ I EM  EP A  W+ LL ACR+HKN +L  YAA+ + +LDP D G +++L 
Sbjct: 418 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 477

Query: 476 NIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDIKREIS 535
           NIYA+  +W D A VR+ M+  GVKKEP CSW+E+   +H F+  D  HP+ E+I R+  
Sbjct: 478 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 537

Query: 536 RVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRIRKNLR 595
            V+ ++  +GYVPDT+ V+  ++ ++ E +LQYHSEK+A+ F L++ P   TI I+KN+R
Sbjct: 538 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 597

Query: 596 ICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQE 620
           +CGDCH   KL +++  R I++RD  R+HHF++
Sbjct: 598 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624

[Close]

BLAST of CmoCh20G007040 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 483.4 bits (1243), Expect = 2.7e-136
Identity = 229/596 (38.42%), Postives = 359/596 (60.23%), Query Frame = 0


Query: 38   DLPRAMKAMEAMQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
            DL  + +    MQ   +  +  TY  ++K C+  G +E G  +H  +    ++   ++ +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 98   TLLNMYVKFGLLDEALKLFDEMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRP 157
             L++MY K G LD A  +      ++VVSWTTMI+ Y+  + +  AL     ML  G+R 
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 158  NMFTYSSVLRACNGLLNLR---QLHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVF 217
            +    ++ + AC GL  L+   Q+H      G  SD+  ++AL+  YS+ G+ +++   F
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 218  NEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLE 277
             +   GD + WN+++ G  Q+ + +EAL ++ RM R G   +  T  S ++A +  A ++
Sbjct: 650  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 278  LGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGL 337
             G+QVH  + K  +D +  + NAL+ MY KCGS+ DA   F   ++ K+ +SW+ +I   
Sbjct: 710  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE-VSTKNEVSWNAIINAY 769

Query: 338  AQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPG 397
            +++GF ++AL  F+ M     +PN++T++GVL ACSH GLV  G  YF+SM   +G+ P 
Sbjct: 770  SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 829

Query: 398  REHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL 457
             EHY C++D+L RAG L  A + I EM  +PDA+ WR LL AC VHKN+++  +AA  +L
Sbjct: 830  PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 889

Query: 458  KLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGD 517
            +L+P D+ TY+LLSN+YA ++KW+     R+ M+ +GVKKEPG SWIEV   +H+F +GD
Sbjct: 890  ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 949

Query: 518  NSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMS 577
             +HP  ++I      + +R   +GYV D   +L +L+ EQ +  +  HSEKLAI FGL+S
Sbjct: 950  QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1009

Query: 578  LPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
            LP    I + KNLR+C DCH + K V+++ NR I++RD  R+HHF+ G CSC DYW
Sbjct: 1010 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]

BLAST of CmoCh20G007040 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 482.6 bits (1241), Expect = 4.7e-136
Identity = 235/587 (40.03%), Postives = 374/587 (63.71%), Query Frame = 0


Query: 49  MQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLINTLLNMYVKFGL 108
           MQ  R+  D+ T+  L+K C     ++ GR VH  VF  G++   F+ N L+ +Y K   
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169

Query: 109 LDEALKLFD--EMPDRNVVSWTTMISAYSNSSLNHMALEFLILMLREGVRPNMFTYSSVL 168
           L  A  +F+   +P+R +VSWT ++SAY+ +     ALE    M +  V+P+     SVL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229

Query: 169 RACNGLLNLRQ---LHGSLMKVGLESDVFVRSALIDTYSKLGEQQDALNVFNEMVTGDLV 228
            A   L +L+Q   +H S++K+GLE +  +  +L   Y+K G+   A  +F++M + +L+
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289

Query: 229 VWNSIIGGLAQNSDGDEALHLYKRMKRAGFAADQSTLTSVLRACTGLALLELGRQVHVHV 288
           +WN++I G A+N    EA+ ++  M       D  ++TS + AC  +  LE  R ++ +V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349

Query: 289 LKFD--QDLILNNALLDMYCKCGSLEDANLVFTRTMADKDVISWSTMIAGLAQNGFSTDA 348
            + D   D+ +++AL+DM+ KCGS+E A LVF RT+ D+DV+ WS MI G   +G + +A
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSAMIVGYGLHGRAREA 409

Query: 349 LKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQSMKELFGIDPGREHYGCIID 408
           + L+ +M+  G  PN +T LG+L AC+H+G+V++GW++F  M +   I+P ++HY C+ID
Sbjct: 410 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVID 469

Query: 409 LLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPTDAGT 468
           LLGRAG LD+A ++I  M  +P    W  LL AC+ H++V+L  YAA+++  +DP++ G 
Sbjct: 470 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 529

Query: 469 YILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEVSKQVHAFILGDNSHPRIEDI 528
           Y+ LSN+YA  + W+ VAEVR  M+ +G+ K+ GCSW+EV  ++ AF +GD SHPR E+I
Sbjct: 530 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 589

Query: 529 KREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPKEKTIRI 588
           +R++  +  RL   G+V + +  L DL  E+ E++L  HSE++AI +GL+S P+   +RI
Sbjct: 590 ERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRI 649

Query: 589 RKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGLCSCGDYW 629
            KNLR C +CH   KL+++L +R IV+RD  R+HHF++G+CSCGDYW
Sbjct: 650 TKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of CmoCh20G007040 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 464.9 bits (1195), Expect = 1.0e-130
Identity = 243/607 (40.03%), Postives = 376/607 (61.94%), Query Frame = 0


Query: 38  DLPRAMKAMEAMQRNRLCADAITYSELIKCCLVRGGVEQGRLVHEHVFSNGYEPKTFLIN 97
           D   A+ A  +M++  L     ++   IK C     +  G+  H+  F  GY+   F+ +
Sbjct: 56  DSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSS 115

Query: 98  TLLNMYVKFGLLDEALKLFDEMPDRNVVSWTTMISAY--SNSSLNHMALEFLILMLREGV 157
            L+ MY   G L++A K+FDE+P RN+VSWT+MI  Y  + ++L+ ++L   +L+     
Sbjct: 116 ALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD 175

Query: 158 RPNMFTYS----SVLRACN-----GLLNLRQLHGSLMKVGLESDVFVRSALIDTYSKLGE 217
              MF  S    SV+ AC+     GL     +H  ++K G +  V V + L+D Y+K GE
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGL--TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 235

Query: 218 QQDAL--NVFNEMVTGDLVVWNSIIGGLAQNSDGDEALHLYKRM-KRAGFAADQSTLTSV 277
              A+   +F+++V  D V +NSI+   AQ+   +EA  +++R+ K      +  TL++V
Sbjct: 236 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 295

Query: 278 LRACTGLALLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDANLVFTRTMADKD 337
           L A +    L +G+ +H  V++   + D+I+  +++DMYCKCG +E A   F R M +K+
Sbjct: 296 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR-MKNKN 355

Query: 338 VISWSTMIAGLAQNGFSTDALKLFESMKLRGPKPNYITVLGVLFACSHAGLVKDGWYYFQ 397
           V SW+ MIAG   +G +  AL+LF +M   G +PNYIT + VL ACSHAGL  +GW +F 
Sbjct: 356 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 415

Query: 398 SMKELFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMKHEPDAVTWRILLGACRVHKNV 457
           +MK  FG++PG EHYGC++DLLGRAG L +A  LI  MK +PD++ W  LL ACR+HKNV
Sbjct: 416 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 475

Query: 458 DLAIYAAKEILKLDPTDAGTYILLSNIYANTQKWEDVAEVRRSMRARGVKKEPGCSWIEV 517
           +LA  +   + +LD ++ G Y+LLS+IYA+  +W+DV  VR  M+ RG+ K PG S +E+
Sbjct: 476 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 535

Query: 518 SKQVHAFILGDNSHPRIEDIKREISRVIQRLVSVGYVPDTNFVLQDLEGEQMEDSLQYHS 577
           + +VH F++GD  HP+ E I   ++ + ++L+  GYV +T+ V  D++ E+ E +L+ HS
Sbjct: 536 NGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHS 595

Query: 578 EKLAIVFGLMSLPKEKTIRIRKNLRICGDCHLFAKLVAQLENRVIVIRDPIRYHHFQEGL 629
           EKLAI FG+M+     T+ + KNLR+C DCH   KL++++ +R  V+RD  R+HHF++G 
Sbjct: 596 EKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGG 655

The following BLAST results are available for this feature:

BLAST of CmoCh20G007040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI53	3.2e-267	68.46	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]
Q9LIQ7	8.8e-148	44.16	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
Q9SVP7	3.9e-135	38.42	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]
Q9LTV8	6.6e-135	40.03	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9LW32	1.4e-129	40.03	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh20G007040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWY5	0.0e+00	100.00	pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbit...	[more]
A0A6J1JFJ7	0.0e+00	98.73	pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucurbit...	[more]
A0A0A0KCS7	0.0e+00	89.81	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1177...	[more]
A0A5D3BPB2	0.0e+00	89.49	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BIG6	0.0e+00	89.49	pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Cucumis ...	[more]

BLAST of CmoCh20G007040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943463.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita ...	[more]
KAG6570970.1	0.0e+00	99.52	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023512954.1	0.0e+00	99.04	pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita ...	[more]
XP_022986985.1	0.0e+00	98.73	pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Cucurbita ...	[more]
XP_038876633.1	0.0e+00	90.46	pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Benincasa ...	[more]

BLAST of CmoCh20G007040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03880.1	2.3e-268	68.46	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G24000.1	3.0e-143	43.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G13650.1	2.7e-136	38.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	4.7e-136	40.03	mitochondrial editing factor 22	[more]
AT3G26782.1	1.0e-130	40.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 388..420 e-value: 6.7E-6 score: 25.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 396..421 e-value: 6.1E-5 score: 20.9 coord: 223..256 e-value: 3.3E-7 score: 28.1 coord: 323..356 e-value: 3.2E-6 score: 25.0 coord: 96..124 e-value: 9.9E-6 score: 23.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 122..169 e-value: 1.0E-10 score: 41.6 coord: 320..366 e-value: 8.3E-8 score: 32.3 coord: 221..267 e-value: 2.2E-9 score: 37.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 195..218 e-value: 0.43 score: 10.9 coord: 294..313 e-value: 0.2 score: 12.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..355 score: 11.717688
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 92..126 score: 10.55579
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 221..255 score: 11.509422
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..422 score: 8.527949
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 57..91 score: 8.911594
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 26..173 e-value: 1.0E-31 score: 112.5 coord: 292..515 e-value: 1.5E-40 score: 141.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 174..274 e-value: 2.1E-20 score: 74.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 407..478
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 99..479
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 494..618 e-value: 6.5E-37 score: 126.2
None	No IPR available	PANTHER	PTHR47925:SF71	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, MITOCHONDRIAL	coord: 20..571
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 20..571

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G007040.1	CmoCh20G007040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding