CmoCh20G006800 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G006800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Nuclear transcription factor Y subunit B-3
Location	Cmo_Chr20: 3342307 .. 3342840 (+)
RNA-Seq Expression	CmoCh20G006800
Synteny	CmoCh20G006800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATGCTTTATTTTTCAATCTCCAAAACAAACCCATTTCCGCTTCACAAATCTTTACACCAACAACAACAACAAGAACAGAAAGAACTAACCTTTCTCTCCTCCGATCACCGGAATTTCTCGTCGGCGTCAGCTCCTACTGTGGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTTTTTTGACCGGTCAACGGCGAATAACCTTTACCGGTCTGATGATGGTTCCATTTCTGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGACATTACGTCAGCCATAAGTCCGATGACGACGACGACGACGACGAAGACGACATGTCGTTTTGTTTCCAGAAACTGTCGGAGTTTCAAAAGCTTAAGAGGAAGAAGAATCTTGTGGAGCTGTTGGCTGAAATTAACGACATCAACGAGGAGGAGAATTTGATCGAGATAGACATATCGATGGGATCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

mRNA sequence

ATGTCCATGCTTTATTTTTCAATCTCCAAAACAAACCCATTTCCGCTTCACAAATCTTTACACCAACAACAACAACAAGAACAGAAAGAACTAACCTTTCTCTCCTCCGATCACCGGAATTTCTCGTCGGCGTCAGCTCCTACTGTGGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTTTTTTGACCGGTCAACGGCGAATAACCTTTACCGGTCTGATGATGGTTCCATTTCTGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGACATTACGTCAGCCATAAGTCCGATGACGACGACGACGACGACGAAGACGACATGTCGTTTTGTTTCCAGAAACTGTCGGAGTTTCAAAAGCTTAAGAGGAAGAAGAATCTTGTGGAGCTGTTGGCTGAAATTAACGACATCAACGAGGAGGAGAATTTGATCGAGATAGACATATCGATGGGATCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

Coding sequence (CDS)

ATGTCCATGCTTTATTTTTCAATCTCCAAAACAAACCCATTTCCGCTTCACAAATCTTTACACCAACAACAACAACAAGAACAGAAAGAACTAACCTTTCTCTCCTCCGATCACCGGAATTTCTCGTCGGCGTCAGCTCCTACTGTGGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTTTTTTGACCGGTCAACGGCGAATAACCTTTACCGGTCTGATGATGGTTCCATTTCTGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGACATTACGTCAGCCATAAGTCCGATGACGACGACGACGACGACGAAGACGACATGTCGTTTTGTTTCCAGAAACTGTCGGAGTTTCAAAAGCTTAAGAGGAAGAAGAATCTTGTGGAGCTGTTGGCTGAAATTAACGACATCAACGAGGAGGAGAATTTGATCGAGATAGACATATCGATGGGATCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

Protein sequence

MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADDNFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDEDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

Homology

[Close]

BLAST of CmoCh20G006800 vs. ExPASy TrEMBL
Match: A0A6J1FUA8 (uncharacterized protein LOC111448485 OS=Cucurbita moschata OX=3662 GN=LOC111448485 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.5e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 60
           MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD
Sbjct: 53  MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 112

Query: 61  NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 120
           NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE
Sbjct: 113 NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 172

Query: 121 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 173 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 229

[Close]

BLAST of CmoCh20G006800 vs. ExPASy TrEMBL
Match: A0A6J1JE34 (uncharacterized protein LOC111483694 OS=Cucurbita maxima OX=3661 GN=LOC111483694 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.2e-86
Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 60
           MSMLYFSISKTNPFPLHKSLH QQQ+EQKELTFLSSDHRNFSSASAPTVDLLSESECADD
Sbjct: 53  MSMLYFSISKTNPFPLHKSLHHQQQEEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 112

Query: 61  NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 120
           NFTTTEESEVEWPFFDRSTA NLYRSDDGSISDEESLIEIALPTGHYV+HKS  DDDDD+
Sbjct: 113 NFTTTEESEVEWPFFDRSTAKNLYRSDDGSISDEESLIEIALPTGHYVNHKS--DDDDDK 172

Query: 121 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 173 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 227

[Close]

BLAST of CmoCh20G006800 vs. ExPASy TrEMBL
Match: A0A6J1CG35 (uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011203 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.5e-58
Identity = 136/184 (73.91%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MSMLYFSISKTN------PFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSE 60
           MSMLYF+ISK N      P P+ K + +++++ + E++F S   + FSSASAPT DLLSE
Sbjct: 53  MSMLYFAISKRNSLPIPIPIPIEKFVEEEEEEAEAEVSFDSD--QKFSSASAPTGDLLSE 112

Query: 61  SECADDNFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDD 120
           SECADDNFTTTEESEVEWPF DR+TA+N  RS DGSISDEESLIEIALPTGHYVSHK DD
Sbjct: 113 SECADDNFTTTEESEVEWPFSDRTTAHNPDRS-DGSISDEESLIEIALPTGHYVSHKFDD 172

Query: 121 D-DDDDEDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRF 178
           D +D+DEDDMSF  QKLS+FQK   +KNLVELLAEINDINEEENLIEIDISMGSIKYSRF
Sbjct: 173 DEEDEDEDDMSFHLQKLSDFQK---QKNLVELLAEINDINEEENLIEIDISMGSIKYSRF 230

[Close]

BLAST of CmoCh20G006800 vs. ExPASy TrEMBL
Match: A0A5D3CJH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001550 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57
Identity = 136/184 (73.91%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQE---QKELTFLSSDHRNFSSASAPTV-DLLSESE 60
           MSMLYFSISK +  P+ K + +Q+++E   QKELTF  SDH   SSASAPT  DLLSESE
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFF-SDHLKSSSASAPTTRDLLSESE 60

Query: 61  CADDNFTTTEESEVEWPFFDRS--TANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDD 120
           CADDNFTTTEESEVEWP+FD     A + +RSDDGSISDEESLIEIALPTGHYVS K DD
Sbjct: 61  CADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 120

Query: 121 -DDDDDEDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRF 178
            D+D+DEDD  F +QKLS+FQ    KKNLVE+LAEINDINEEENLIEIDISMGSIKYSRF
Sbjct: 121 VDEDEDEDDTPFRYQKLSDFQ----KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRF 179

[Close]

BLAST of CmoCh20G006800 vs. ExPASy TrEMBL
Match: A0A1S3CMD0 (uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57
Identity = 136/184 (73.91%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQE---QKELTFLSSDHRNFSSASAPTV-DLLSESE 60
           MSMLYFSISK +  P+ K + +Q+++E   QKELTF  SDH   SSASAPT  DLLSESE
Sbjct: 54  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFF-SDHLKSSSASAPTTRDLLSESE 113

Query: 61  CADDNFTTTEESEVEWPFFDRS--TANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDD 120
           CADDNFTTTEESEVEWP+FD     A + +RSDDGSISDEESLIEIALPTGHYVS K DD
Sbjct: 114 CADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFDD 173

Query: 121 -DDDDDEDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRF 178
            D+D+DEDD  F +QKLS+FQ    KKNLVE+LAEINDINEEENLIEIDISMGSIKYSRF
Sbjct: 174 VDEDEDEDDTPFRYQKLSDFQ----KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRF 232

[Close]

BLAST of CmoCh20G006800 vs. NCBI nr
Match: XP_022943897.1 (uncharacterized protein LOC111448485 [Cucurbita moschata])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 60
           MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD
Sbjct: 53  MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 112

Query: 61  NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 120
           NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE
Sbjct: 113 NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 172

Query: 121 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 173 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 229

[Close]

BLAST of CmoCh20G006800 vs. NCBI nr
Match: KAG6570945.1 (hypothetical protein SDJN03_29860, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.7 bits (857), Expect = 4.8e-88
Identity = 172/175 (98.29%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 3   MLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADDNF 62
           MLYFSISKTNPFPLHKSLHQQQQ+EQKELTFLSSDHRNFSSASAPTVDLLSESECADDNF
Sbjct: 1   MLYFSISKTNPFPLHKSLHQQQQEEQKELTFLSSDHRNFSSASAPTVDLLSESECADDNF 60

Query: 63  TTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDEDD 122
           TTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTG+YVSHKSDDDDDDD+DD
Sbjct: 61  TTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGNYVSHKSDDDDDDDQDD 120

Query: 123 MSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           MSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 121 MSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 175

[Close]

BLAST of CmoCh20G006800 vs. NCBI nr
Match: XP_022985724.1 (uncharacterized protein LOC111483694 [Cucurbita maxima])

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 60
           MSMLYFSISKTNPFPLHKSLH QQQ+EQKELTFLSSDHRNFSSASAPTVDLLSESECADD
Sbjct: 53  MSMLYFSISKTNPFPLHKSLHHQQQEEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 112

Query: 61  NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 120
           NFTTTEESEVEWPFFDRSTA NLYRSDDGSISDEESLIEIALPTGHYV+HKS  DDDDD+
Sbjct: 113 NFTTTEESEVEWPFFDRSTAKNLYRSDDGSISDEESLIEIALPTGHYVNHKS--DDDDDK 172

Query: 121 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 173 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 227

[Close]

BLAST of CmoCh20G006800 vs. NCBI nr
Match: KAG7010784.1 (hypothetical protein SDJN02_27580, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 169/175 (96.57%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 3   MLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADDNF 62
           MLYFSISKTNPFPLHKSLHQQQQ+EQKELTFLSSDHRNFSSASAPTVDLLSESECADDNF
Sbjct: 1   MLYFSISKTNPFPLHKSLHQQQQEEQKELTFLSSDHRNFSSASAPTVDLLSESECADDNF 60

Query: 63  TTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDEDD 122
           T TEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDD    DD
Sbjct: 61  TITEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDD----DD 120

Query: 123 MSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           MSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 121 MSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 171

[Close]

BLAST of CmoCh20G006800 vs. NCBI nr
Match: XP_023513390.1 (uncharacterized protein LOC111777891 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.4 bits (786), Expect = 8.1e-80
Identity = 164/177 (92.66%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MSMLYFSISKTNPFPLHKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 60
           MSMLYFSISKTNPFPLHKSLHQQQ++EQKELTFLSSDHRNFSSASAPTVDLLSESECADD
Sbjct: 53  MSMLYFSISKTNPFPLHKSLHQQQEEEQKELTFLSSDHRNFSSASAPTVDLLSESECADD 112

Query: 61  NFTTTEESEVEWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDE 120
           NFTTTEESEVEWPFFDRSTA N+YRSDDGSISDEESLIEIALPT HYVSHKS DDDDDD+
Sbjct: 113 NFTTTEESEVEWPFFDRSTAKNIYRSDDGSISDEESLIEIALPTRHYVSHKS-DDDDDDK 172

Query: 121 DDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
           DDMSF      EFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 173 DDMSF------EFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 222

[Close]

BLAST of CmoCh20G006800 vs. TAIR 10
Match: AT2G04480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits to 38 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 9.8e-15
Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 14  FPL---HKSLHQQQQQEQKELTFLSSDHRNFSSASAPTVDLLSESECADDNFTTTEESEV 73
           FP+   H S+   +Q + +E  +++            T D+  +SE   +N   T E + 
Sbjct: 125 FPISLPHSSIQSSKQDQDQEGHYIA------------TKDITGKSE---ENLEKTNEED- 184

Query: 74  EWPFFDRSTANNLYRSDDGSISDEESLIEIALPTGHYVSHKSDDDDDDDEDDMSFCFQKL 133
                           DDG+I D+ESLIE++LP+GHY+ H  + + +       +   K+
Sbjct: 185 ----------------DDGAIPDDESLIELSLPSGHYLGHHYNSNKNH-----LYIHNKV 244

Query: 134 SEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
            +F+       L +LL EIND  EE+NLIEIDIS+GSIKYSRFEI+A
Sbjct: 245 QDFR-------LFDLLNEINDFTEEDNLIEIDISIGSIKYSRFEIKA 247

[Close]

BLAST of CmoCh20G006800 vs. TAIR 10
Match: AT5G35870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 78  STANNLYRS---DDGSISDEESLIEIALPTGHYVSHKSDDDDDDDEDDMSFCFQKLSEFQ 137
           +T N++ ++   DDG+I DEESLIE++LP+GHY+ H         + D    +  + +F+
Sbjct: 107 TTTNDIVKNNDEDDGTIPDEESLIELSLPSGHYIGHHY--STMIGKQDQKIMYNNIPDFR 166

Query: 138 KLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA 178
                  L++L AE     E++NLIEIDIS+GSIK SRF+I+A
Sbjct: 167 -------LIQLSAEY----EDDNLIEIDISIGSIKCSRFQIKA 196

The following BLAST results are available for this feature:

BLAST of CmoCh20G006800 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G006800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUA8	6.5e-91	100.00	uncharacterized protein LOC111448485 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JE34	8.2e-86	96.05	uncharacterized protein LOC111483694 OS=Cucurbita maxima OX=3661 GN=LOC111483694...	[more]
A0A6J1CG35	2.5e-58	73.91	uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A5D3CJH9	2.1e-57	73.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CMD0	2.1e-57	73.91	uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=...	[more]

BLAST of CmoCh20G006800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943897.1	1.3e-90	100.00	uncharacterized protein LOC111448485 [Cucurbita moschata]	[more]
KAG6570945.1	4.8e-88	98.29	hypothetical protein SDJN03_29860, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022985724.1	1.7e-85	96.05	uncharacterized protein LOC111483694 [Cucurbita maxima]	[more]
KAG7010784.1	1.4e-84	96.57	hypothetical protein SDJN02_27580, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023513390.1	8.1e-80	92.66	uncharacterized protein LOC111777891 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh20G006800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04480.1	9.8e-15	35.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35870.1	1.0e-11	41.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35708:SF3	GB\|AAD25831.1	coord: 3..177
None	No IPR available	PANTHER	PTHR35708	GB\|AAD25831.1	coord: 3..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G006800.1	CmoCh20G006800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane