CmoCh20G006540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G006540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Glutaredoxin
Location	Cmo_Chr20: 3200828 .. 3201265 (+)
RNA-Seq Expression	CmoCh20G006540
Synteny	CmoCh20G006540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAAGCAATTCCTTACCGGTCATGGCAATCAATTGACACAAAACAGGGCACATTATCAATGAGATCAACATGGGGGGGCGGATCAGCGTCTGCGACAGCGGAAGGTGGGGGATCGAGAAGCGATGTGATTGCGTCGGTGGCGGAGAATGCGGCGATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGGCTTCTTCTGGGGTTGGGTGCTAATCCGGCGGTGTACGAGGTGGAGGAAGAACAAGAATCCGGCGTCCTGAAGGAATTGGAGGCCTTCGCCAAATCTCCCAACGCCGAGATACAGTTGCCGGCGGTGTTTATTGGGGGCACCCTGTTTGGGGGTTTGGATAGAGTCATGGCCACTCATATTTCTGGGGAATTGGTTCCCATTTTGAAACAAGCCGGCGCTTTGTGGCTTTGA

mRNA sequence

ATGCACCAAGCAATTCCTTACCGGTCATGGCAATCAATTGACACAAAACAGGGCACATTATCAATGAGATCAACATGGGGGGGCGGATCAGCGTCTGCGACAGCGGAAGGTGGGGGATCGAGAAGCGATGTGATTGCGTCGGTGGCGGAGAATGCGGCGATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGGCTTCTTCTGGGGTTGGGTGCTAATCCGGCGGTGTACGAGGTGGAGGAAGAACAAGAATCCGGCGTCCTGAAGGAATTGGAGGCCTTCGCCAAATCTCCCAACGCCGAGATACAGTTGCCGGCGGTGTTTATTGGGGGCACCCTGTTTGGGGGTTTGGATAGAGTCATGGCCACTCATATTTCTGGGGAATTGGTTCCCATTTTGAAACAAGCCGGCGCTTTGTGGCTTTGA

Coding sequence (CDS)

ATGCACCAAGCAATTCCTTACCGGTCATGGCAATCAATTGACACAAAACAGGGCACATTATCAATGAGATCAACATGGGGGGGCGGATCAGCGTCTGCGACAGCGGAAGGTGGGGGATCGAGAAGCGATGTGATTGCGTCGGTGGCGGAGAATGCGGCGATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGGCTTCTTCTGGGGTTGGGTGCTAATCCGGCGGTGTACGAGGTGGAGGAAGAACAAGAATCCGGCGTCCTGAAGGAATTGGAGGCCTTCGCCAAATCTCCCAACGCCGAGATACAGTTGCCGGCGGTGTTTATTGGGGGCACCCTGTTTGGGGGTTTGGATAGAGTCATGGCCACTCATATTTCTGGGGAATTGGTTCCCATTTTGAAACAAGCCGGCGCTTTGTGGCTTTGA

Protein sequence

MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL

Homology

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BLAST of CmoCh20G006540 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-31
Identity = 77/136 (56.62%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 17  QGTLS------MRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRGCCMSHVVKRL 76
           QGT+S      M +T G      + +  G+   V   V ENA IV  RRGCCM HVV+RL
Sbjct: 2   QGTISCARNYNMTTTVGESLRPLSLKTQGNGERVRMVVEENAVIVIGRRGCCMCHVVRRL 61

Query: 77  LLGLGANPAVYEVEEEQESGVLKELEAF-AKSPNAEIQLPAVFIGGTLFGGLDRVMATHI 136
           LLGLG NPAV E++EE+E  VL ELE    +     ++LPAV++GG LFGGLDRVMATHI
Sbjct: 62  LLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHI 121

Query: 137 SGELVPILKQAGALWL 146
           SGELVPILK+ GALWL
Sbjct: 122 SGELVPILKEVGALWL 137

[Close]

BLAST of CmoCh20G006540 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-26
Identity = 74/153 (48.37%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGG-------GSRSDVIASVAENAA 60
           M+QAIPY +                W   S  ATA          G   +V  +VAE   
Sbjct: 1   MYQAIPYNA-------------NRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPV 60

Query: 61  IVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQE-SGVLKELEAFAKSPNAEIQLPAVF 120
           +V  R GCC+SHVVKRLL GLG NPAV+EV  E E +GV+        +    + LPAVF
Sbjct: 61  VVVGRSGCCLSHVVKRLLQGLGVNPAVHEVAGEAELAGVV--------AGGGGVALPAVF 120

Query: 121 IGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +GG L GGLDR+MA HISGELVPILK+AGALWL
Sbjct: 121 VGGRLLGGLDRLMAVHISGELVPILKEAGALWL 132

[Close]

BLAST of CmoCh20G006540 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-25
Identity = 71/153 (46.41%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 1   MHQAIPY---RSWQSIDTKQGTLSM-----RSTWGGGSASATAEGGGSRSDVIASVAENA 60
           M+QAIPY   R W   +     + +      +   G    A   G    ++V  +VAE+ 
Sbjct: 1   MYQAIPYSSTRPWLRPEPAASVVDVVKVETTTAVAGRGGEAEVVGEEEAAEVRRAVAESP 60

Query: 61  AIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVF 120
            +V  RRGCC+ HVVKRLL GLG NPAV+EV  E        L+    +      LPAVF
Sbjct: 61  VLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGE------AALKGVVPAGGEAAALPAVF 120

Query: 121 IGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +GG L GGLDR+MA HISGELVPILK+AGALWL
Sbjct: 121 VGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of CmoCh20G006540 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-23
Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 27  GGGSASATAEGGGSRS-DVIASVAENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEE 86
           G  SA+A A        +V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV +
Sbjct: 3   GARSAAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGD 62

Query: 87  EQESGVLKELEAFAK--------------SPNAEIQLPAVFIGGTLFGGLDRVMATHISG 146
           + +   L +    A+                 A +  PAVFIGG L GGLDR+MA H++G
Sbjct: 63  DADPAALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAG 122

[Close]

BLAST of CmoCh20G006540 vs. ExPASy Swiss-Prot
Match: Q7XIZ1 (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 51  NAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKS--PNAEIQL 110
           NA +VF+  GCCM HVVKRLLLGLG  PAVYE++   +     +++A      P  +  +
Sbjct: 99  NAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELD---QLAAAADIQAALSQLLPPGQPPV 158

Query: 111 PAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           P VF+GG L GG+++VMA HI+G LVP+LKQAGALWL
Sbjct: 159 PVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGALWL 192

[Close]

BLAST of CmoCh20G006540 vs. ExPASy TrEMBL
Match: A0A6J1FV54 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111448720 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.8e-73
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISGELVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of CmoCh20G006540 vs. ExPASy TrEMBL
Match: A0A6J1JFY3 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.2e-72
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQGTLSMRS WGGGSASATAEGGGSRSDVIASV+ENAAIVFARRG
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRG 86

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG
Sbjct: 87  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 146

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISGELVPILKQAGALWL
Sbjct: 147 LDRVMATHISGELVPILKQAGALWL 171

[Close]

BLAST of CmoCh20G006540 vs. ExPASy TrEMBL
Match: U3RBI7 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX6 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 126/150 (84.00%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTW-----GGGSASATAEGGGSRSDVIASVAENAAIV 60
           MHQAIPYRSWQSIDTKQ TLSMR  W     GG +AS  +EGGG R DV+ASV+E+AAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEV+EEQESGVLKELEAFAKS N  +QLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGELVPILKQAGALWL 146
           TLFGGLDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 150

[Close]

BLAST of CmoCh20G006540 vs. ExPASy TrEMBL
Match: A0A5D3CE70 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00610 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.7e-61
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWG---GGSASATAEGGGSRSDVIASVAENAAIVFA 60
           MHQAIPYRSWQSIDTKQ TL+MR  W    GGSAS  +EGGG R DV+ASV+E+AAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EE ESGVLKELEAFAKS N  +QLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGELVPILKQAGALWL 146
           FGGLDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of CmoCh20G006540 vs. ExPASy TrEMBL
Match: A0A1S3C224 (glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.7e-61
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWG---GGSASATAEGGGSRSDVIASVAENAAIVFA 60
           MHQAIPYRSWQSIDTKQ TL+MR  W    GGSAS  +EGGG R DV+ASV+E+AAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EE ESGVLKELEAFAKS N  +QLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGELVPILKQAGALWL 146
           FGGLDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of CmoCh20G006540 vs. NCBI nr
Match: XP_022944202.1 (glutaredoxin-C9-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 7.9e-73
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISGELVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of CmoCh20G006540 vs. NCBI nr
Match: KAG6570913.1 (Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010757.1 Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.6 bits (719), Expect = 3.9e-72
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQGTLSMRSTWG GSASATAEGGGSRSDVIASVAENAAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGSGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISGELVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of CmoCh20G006540 vs. NCBI nr
Match: XP_022986394.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 6.7e-72
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQGTLSMRS WGGGSASATAEGGGSRSDVIASV+ENAAIVFARRG
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRG 86

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG
Sbjct: 87  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 146

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISGELVPILKQAGALWL
Sbjct: 147 LDRVMATHISGELVPILKQAGALWL 171

[Close]

BLAST of CmoCh20G006540 vs. NCBI nr
Match: XP_023513051.1 (glutaredoxin-C9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-70
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQGTLSMRSTW GGSASATAEGGGSRS+VIASVAENAAIVFAR+G
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWVGGSASATAEGGGSRSNVIASVAENAAIVFARKG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEEQES VLKELEAFAKSPNAEIQLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESSVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISGELVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of CmoCh20G006540 vs. NCBI nr
Match: XP_038901995.1 (glutaredoxin-C9-like [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 131/145 (90.34%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ TLS R  WGGGSASATAEGGGSRSDVIASV+E+AAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSTRPPWGGGSASATAEGGGSRSDVIASVSESAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEV+EE ESGV+KELEAFAKS N ++QLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVKLQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGELVPILKQAGALWL 146
           LDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 LDRVMATHISGDLVPILKQAGALWL 145

[Close]

BLAST of CmoCh20G006540 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 77/136 (56.62%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 17  QGTLS------MRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRGCCMSHVVKRL 76
           QGT+S      M +T G      + +  G+   V   V ENA IV  RRGCCM HVV+RL
Sbjct: 2   QGTISCARNYNMTTTVGESLRPLSLKTQGNGERVRMVVEENAVIVIGRRGCCMCHVVRRL 61

Query: 77  LLGLGANPAVYEVEEEQESGVLKELEAF-AKSPNAEIQLPAVFIGGTLFGGLDRVMATHI 136
           LLGLG NPAV E++EE+E  VL ELE    +     ++LPAV++GG LFGGLDRVMATHI
Sbjct: 62  LLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHI 121

Query: 137 SGELVPILKQAGALWL 146
           SGELVPILK+ GALWL
Sbjct: 122 SGELVPILKEVGALWL 137

[Close]

BLAST of CmoCh20G006540 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 59/132 (44.70%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 14  DTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRGCCMSHVVKRLLLG 73
           D    + S  S    GS   T+      S+++  V ENA +VFARRGCC+ HV KRLLL 
Sbjct: 28  DKPSSSSSSLSWLTSGSPKPTSISNKRSSNLV--VMENAVVVFARRGCCLGHVAKRLLLT 87

Query: 74  LGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGEL 133
            G NP V E+ EE  +        +    + + +LP ++IGG LFGGL+ +MA HI+G+L
Sbjct: 88  HGVNPVVVEIGEEDNNN-------YDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDL 147

Query: 134 VPILKQAGALWL 146
           VP L+QAGALWL
Sbjct: 148 VPTLRQAGALWL 150

[Close]

BLAST of CmoCh20G006540 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 4.8e-20
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 49  AENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVE-----EEQESGVLKELEAFAKSPN 108
           AENA ++F+   CCM H +KRL  G+G +PAV+E++      E    +L+ L   +    
Sbjct: 39  AENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGAT 98

Query: 109 AEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +   LP VFIGG + G ++RVMA+HI+G LVP+LK AGALWL
Sbjct: 99  SPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmoCh20G006540 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-20
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 48  VAENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQ 107
           ++E + ++F++  CCMSH +K L L LG NP +YE++E       KE+E           
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRG---KEIEHALAQLGCSPT 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CmoCh20G006540 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-19
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 48  VAENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQ 107
           V E   +++++  CCMSH +K LL   GANPAVYE++E       +E+E           
Sbjct: 8   VMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRG---REIEQALLRLGCSPA 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +P VFIGG L GG + VM+ H++G L+P+LK+AGALW+
Sbjct: 68  VPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

The following BLAST results are available for this feature:

BLAST of CmoCh20G006540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	2.7e-31	56.62	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	3.4e-26	48.37	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q5QLR2	2.2e-25	46.41	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q0JP62	6.0e-23	47.01	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]
Q7XIZ1	3.9e-22	53.61	Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1	[more]

BLAST of CmoCh20G006540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV54	3.8e-73	100.00	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111448720 PE=3 SV=1	[more]
A0A6J1JFY3	3.2e-72	98.62	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1	[more]
U3RBI7	2.6e-61	84.00	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX6 PE=2 SV=1	[more]
A0A5D3CE70	5.7e-61	84.46	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757...	[more]
A0A1S3C224	5.7e-61	84.46	glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1	[more]

BLAST of CmoCh20G006540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944202.1	7.9e-73	100.00	glutaredoxin-C9-like [Cucurbita moschata]	[more]
KAG6570913.1	3.9e-72	99.31	Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010757.1 G...	[more]
XP_022986394.1	6.7e-72	98.62	glutaredoxin-C9-like [Cucurbita maxima]	[more]
XP_023513051.1	3.7e-70	97.24	glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]	[more]
XP_038901995.1	2.7e-65	90.34	glutaredoxin-C9-like [Benincasa hispida]	[more]

BLAST of CmoCh20G006540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	1.9e-32	56.62	Thioredoxin superfamily protein	[more]
AT1G03850.2	1.8e-22	44.70	Glutaredoxin family protein	[more]
AT5G14070.1	4.8e-20	46.08	Thioredoxin superfamily protein	[more]
AT4G15700.1	8.3e-20	43.88	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.4e-19	43.88	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 40..144 e-value: 6.2E-23 score: 82.6
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 41..145
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 41..144 score: 18.972342
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 47..145 e-value: 2.8E-36 score: 121.4
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 41..145
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 54..117 e-value: 7.7E-7 score: 29.3
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 48..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G006540.1	CmoCh20G006540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity