CmoCh20G006510 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G006510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RAB GTPase homolog A1F
Location	Cmo_Chr20: 3184632 .. 3185844 (+)
RNA-Seq Expression	CmoCh20G006510
Synteny	CmoCh20G006510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAATAGAAAGCAAAAGCAGAGCATTCTTGTAAGGAATCGTCTCCCCTTTCAATCTCGTCTCTCCTCCGGCAGCCTCATCCTCTCCCTCTCTCTCTCTCTCTCTCGTTCTCTCCCCCTCTCTCTCTTCCCTTGGAGACTGTCGGGATCTCTGTCTTTATCTATTTATTTATAAATCCAGATCCCATTTCCTAAAAATCGTCGCATAATTATAATCTCCTCTGTTTTCGACAATTCTTGAAATGGGCGCTTACAGAGCCGATGATGATTACGATTACCTGTTCAAGGTGGTGCTGATCGGCGACTCCGGCGTCGGAAAATCCAATCTCTTATCCCGTTTCACCCGAAATGAATTCAGCCTCGAGACCAAATCGACCATCGGGGTTGAATTCGCTACTCGTAGTATTCGCGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTTTTCCTTGATTTTTATTTTTTTTAAAATTATGAATTATAAATTTAGTCTCTGAACTTTTGGGTGTAATAGGTATCGAGCGATTACGAGCGCGTATTATAGGGGAGCGGTAGGAGCATTGATAGTGTACGACGTGACGCGGCATGTGACATTTGAGAATGTGGAGAGATGGCTGAAGGAGTTAAGAGGGCACACGGATCACAACATAGTGATAATGCTGGTAGGGAACAAAGCGGATTTGCGGCACCTGAGGGCAGTGTCGACGGAGGACGCGCAGGCATTTGCAGAGAGGGAGAGAACATATTTCATGGAGACATCAGCATTAGAGTCATTCAACGTCGAGAATTCCTTCACGGAGGTTCTCACGCAGACCTACAGAGTGGTGAGCAGGAAGATCCTTGACATTGGAGATGACCCCACAGTCCTGCCTAAGGGACAGACCATTGACATTGGCTCCAAGGATGATGTCTCTGCCGTTAAGAAGGCTGGCTGCTGTTCTTCATAACAATCTTCAAATACTTAAATGAATTCATTCCTCAAATGGGTCTCTCTTTGATTTTGGTTTTGTTTTGTTTTTCTAAATTTTGTTTGGTTTTTGATTTTTTTGTTGGGGAAATGTTGAATGATCATGTGTGTTCCTTGGAATGCATAATTTCTAGTGCTGTTTTTAGGTAGGCTGTACCTATGAATTTGATGGATGCTTAGAAGAAGAAGAAGAAGAAGAAGATGAATTATTGGAGAACAAATGTAC

mRNA sequence

GCAAATAGAAAGCAAAAGCAGAGCATTCTTGTAAGGAATCGTCTCCCCTTTCAATCTCGTCTCTCCTCCGGCAGCCTCATCCTCTCCCTCTCTCTCTCTCTCTCTCGTTCTCTCCCCCTCTCTCTCTTCCCTTGGAGACTGTCGGGATCTCTGTCTTTATCTATTTATTTATAAATCCAGATCCCATTTCCTAAAAATCGTCGCATAATTATAATCTCCTCTGTTTTCGACAATTCTTGAAATGGGCGCTTACAGAGCCGATGATGATTACGATTACCTGTTCAAGGTGGTGCTGATCGGCGACTCCGGCGTCGGAAAATCCAATCTCTTATCCCGTTTCACCCGAAATGAATTCAGCCTCGAGACCAAATCGACCATCGGGGTTGAATTCGCTACTCGTAGTATTCGCGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTATCGAGCGATTACGAGCGCGTATTATAGGGGAGCGGTAGGAGCATTGATAGTGTACGACGTGACGCGGCATGTGACATTTGAGAATGTGGAGAGATGGCTGAAGGAGTTAAGAGGGCACACGGATCACAACATAGTGATAATGCTGGTAGGGAACAAAGCGGATTTGCGGCACCTGAGGGCAGTGTCGACGGAGGACGCGCAGGCATTTGCAGAGAGGGAGAGAACATATTTCATGGAGACATCAGCATTAGAGTCATTCAACGTCGAGAATTCCTTCACGGAGGTTCTCACGCAGACCTACAGAGTGGTGAGCAGGAAGATCCTTGACATTGGAGATGACCCCACAGTCCTGCCTAAGGGACAGACCATTGACATTGGCTCCAAGGATGATGTCTCTGCCGTTAAGAAGGCTGGCTGCTGTTCTTCATAACAATCTTCAAATACTTAAATGAATTCATTCCTCAAATGGGTCTCTCTTTGATTTTGGTTTTGTTTTGTTTTTCTAAATTTTGTTTGGTTTTTGATTTTTTTGTTGGGGAAATGTTGAATGATCATGTGTGTTCCTTGGAATGCATAATTTCTAGTGCTGTTTTTAGGTAGGCTGTACCTATGAATTTGATGGATGCTTAGAAGAAGAAGAAGAAGAAGAAGATGAATTATTGGAGAACAAATGTAC

Coding sequence (CDS)

ATGGGCGCTTACAGAGCCGATGATGATTACGATTACCTGTTCAAGGTGGTGCTGATCGGCGACTCCGGCGTCGGAAAATCCAATCTCTTATCCCGTTTCACCCGAAATGAATTCAGCCTCGAGACCAAATCGACCATCGGGGTTGAATTCGCTACTCGTAGTATTCGCGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTATCGAGCGATTACGAGCGCGTATTATAGGGGAGCGGTAGGAGCATTGATAGTGTACGACGTGACGCGGCATGTGACATTTGAGAATGTGGAGAGATGGCTGAAGGAGTTAAGAGGGCACACGGATCACAACATAGTGATAATGCTGGTAGGGAACAAAGCGGATTTGCGGCACCTGAGGGCAGTGTCGACGGAGGACGCGCAGGCATTTGCAGAGAGGGAGAGAACATATTTCATGGAGACATCAGCATTAGAGTCATTCAACGTCGAGAATTCCTTCACGGAGGTTCTCACGCAGACCTACAGAGTGGTGAGCAGGAAGATCCTTGACATTGGAGATGACCCCACAGTCCTGCCTAAGGGACAGACCATTGACATTGGCTCCAAGGATGATGTCTCTGCCGTTAAGAAGGCTGGCTGCTGTTCTTCATAA

Protein sequence

MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIVIMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS

Homology

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BLAST of CmoCh20G006510 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 2.6e-107
Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IM VGNKADLRHLRAVSTEDA+AFAERE T+FMETSALES NVEN+FTEVL+Q YRVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

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BLAST of CmoCh20G006510 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-104
Identity = 189/217 (87.10%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDA+AFAERE T+FMETSALE+ NVEN+FTEVL+Q YRV S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDD T LPKGQ+I++GSKDDVS VKK GCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

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BLAST of CmoCh20G006510 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.6e-104
Identity = 188/216 (87.04%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 2   GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKI 61
           G YRA+DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LE+KSTIGVEFATRSIRVDDKI
Sbjct: 3   GGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI 62

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELR HTD NIVI
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122

Query: 122 MLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRK 181
           MLVGNKADLRHLRAVSTEDA+AFAERE T+FMETSALES NVEN+FTEVLT+ Y+VV RK
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182

Query: 182 ILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
            L++GDDP  LPKGQTI++G KDDVSAVKK GCCSS
Sbjct: 183 ALEVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

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BLAST of CmoCh20G006510 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.4e-100
Identity = 181/218 (83.03%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS ++++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRA+STE+A+AFAERE T+FMETSALE+ NV+N+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K L+ GDDP T LPKGQ I++G +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

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BLAST of CmoCh20G006510 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.5e-99
Identity = 180/218 (82.57%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +++STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADL HLRA+STE+ + FAERE T+FMETSALE+ NVEN+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LD GDDP T LPKGQ I++GS+DDVSAVKK+GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

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BLAST of CmoCh20G006510 vs. ExPASy TrEMBL
Match: A0A6J1G637 (ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111451118 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. ExPASy TrEMBL
Match: A0A6J1I4T0 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111469871 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. ExPASy TrEMBL
Match: A0A6J1JAX5 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111484133 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.3e-116
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. ExPASy TrEMBL
Match: A0A0A0LN26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415550 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.3e-116
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. ExPASy TrEMBL
Match: A0A5D3CEB7 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00260 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.0e-115
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTV PKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVPPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. NCBI nr
Match: XP_022944131.1 (ras-related protein RABA1f-like [Cucurbita moschata] >XP_022947170.1 ras-related protein RABA1f-like [Cucurbita moschata] >XP_022971100.1 ras-related protein RABA1f-like [Cucurbita maxima] >XP_023512680.1 ras-related protein RABA1f-like [Cucurbita pepo subsp. pepo] >XP_023533793.1 ras-related protein RABA1f-like [Cucurbita pepo subsp. pepo] >XP_038900910.1 ras-related protein RABA1f-like [Benincasa hispida] >KAG6570909.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010754.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG6604881.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026962.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428.3 bits (1100), Expect = 3.9e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. NCBI nr
Match: XP_031736627.1 (ras-related protein RABA1f [Cucumis sativus] >KGN63213.1 hypothetical protein Csa_022290 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. NCBI nr
Match: XP_022986376.1 (ras-related protein RABA1f-like [Cucurbita maxima])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVS EDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSMEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. NCBI nr
Match: XP_008455938.1 (PREDICTED: ras-related protein RABA1f [Cucumis melo] >KAA0067439.1 ras-related protein RABA1f [Cucumis melo var. makuwa] >TYK09544.1 ras-related protein RABA1f [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELR HTDHNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIGDDPTV PKGQTIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGDDPTVPPKGQTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. NCBI nr
Match: XP_022140351.1 (ras-related protein RABA1f-like [Momordica charantia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114
Identity = 214/217 (98.62%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDQNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           KILDIG+DPTVLPKG TIDIGSKDDVSAVKKAGCCSS
Sbjct: 181 KILDIGEDPTVLPKGHTIDIGSKDDVSAVKKAGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 389.4 bits (999), Expect = 1.9e-108
Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IM VGNKADLRHLRAVSTEDA+AFAERE T+FMETSALES NVEN+FTEVL+Q YRVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDDP  LPKGQTI++GSKDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CmoCh20G006510 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 379.0 bits (972), Expect = 2.5e-105
Identity = 189/217 (87.10%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAVSTEDA+AFAERE T+FMETSALE+ NVEN+FTEVL+Q YRV S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LDIGDD T LPKGQ+I++GSKDDVS VKK GCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of CmoCh20G006510 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-101
Identity = 181/218 (83.03%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS ++++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRA+STE+A+AFAERE T+FMETSALE+ NV+N+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K L+ GDDP T LPKGQ I++G +DD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of CmoCh20G006510 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-100
Identity = 180/218 (82.57%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +++STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADL HLRA+STE+ + FAERE T+FMETSALE+ NVEN+FTEVLTQ YRVVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KILDIGDDP-TVLPKGQTIDIGSKDDVSAVKKAGCCSS 218
           K LD GDDP T LPKGQ I++GS+DDVSAVKK+GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of CmoCh20G006510 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 361.7 bits (927), Expect = 4.2e-100
Identity = 176/216 (81.48%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
           MGAYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+E+KSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRGHTDHNIV 120
           I+KAQ+WDTAGQERYRAITSAYYRGAVGAL+VYD+TRH+TFENVERWLKELR HTD N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
           IMLVGNKADLRHLRAV TE+A++F+ERE  +FMETSAL++ NVE +FT VLTQ YRV+SR
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCS 217
           K LD   DP  LPKGQTIDIG+KDDV+AVK +GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of CmoCh20G006510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	2.6e-107	89.86	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q9LK99	3.5e-104	87.10	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q40521	4.6e-104	87.04	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9S810	2.4e-100	83.03	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]
Q1PEX3	1.5e-99	82.57	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of CmoCh20G006510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G637	1.9e-116	100.00	ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111451118 PE...	[more]
A0A6J1I4T0	1.9e-116	100.00	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111469871 PE=4...	[more]
A0A6J1JAX5	9.3e-116	99.54	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111484133 PE=4...	[more]
A0A0A0LN26	9.3e-116	99.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415550 PE=4 SV=1	[more]
A0A5D3CEB7	6.0e-115	99.08	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of CmoCh20G006510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944131.1	3.9e-116	100.00	ras-related protein RABA1f-like [Cucurbita moschata] >XP_022947170.1 ras-related...	[more]
XP_031736627.1	1.9e-115	99.54	ras-related protein RABA1f [Cucumis sativus] >KGN63213.1 hypothetical protein Cs...	[more]
XP_022986376.1	1.9e-115	99.54	ras-related protein RABA1f-like [Cucurbita maxima]	[more]
XP_008455938.1	1.2e-114	99.08	PREDICTED: ras-related protein RABA1f [Cucumis melo] >KAA0067439.1 ras-related p...	[more]
XP_022140351.1	3.6e-114	98.62	ras-related protein RABA1f-like [Momordica charantia]	[more]

BLAST of CmoCh20G006510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	1.9e-108	89.86	RAB GTPase homolog A1F	[more]
AT3G15060.1	2.5e-105	87.10	RAB GTPase homolog A1G	[more]
AT1G28550.1	1.7e-101	83.03	RAB GTPase homolog A1I	[more]
AT2G33870.1	1.1e-100	82.57	RAB GTPase homolog A1H	[more]
AT4G18430.1	4.2e-100	81.48	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.2 coord: 37..53 score: 36.07 coord: 55..77 score: 53.32 coord: 117..130 score: 54.55 coord: 152..174 score: 36.34
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.0E-24 score: 98.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 e-value: 5.3E-9 score: 45.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.9E-108 score: 375.6
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..179 e-value: 0.0036 score: 1.0
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..215
None	No IPR available	PANTHER	PTHR47979:SF21	RAS-RELATED PROTEIN RABA1F-LIKE	coord: 1..215
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.78985
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.611893
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.72436E-126 score: 352.248
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 6.0E-13 score: 45.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..174 e-value: 2.8E-61 score: 205.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..217 score: 15.885264
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.2E-38 score: 130.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 1.7E-69 score: 235.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G006510.1	CmoCh20G006510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding