CmoCh20G006100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G006100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	peroxisome biogenesis protein 22
Location	Cmo_Chr20: 2989070 .. 2993296 (+)
RNA-Seq Expression	CmoCh20G006100
Synteny	CmoCh20G006100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGTGGGCGACAGGAAAAAATAGGGAACCTCATTAACATTTCAACATCAGTATCAGCCATTGACGCCATAGCTCGCTTCCTTCTTCTGCTTCCAAATCCCTCTACTGCTCAACTAACTTTGACGCCTCAATAATTCCATTTCGATTCTTCTATCCGCTTCCTTCTTCTGCTGGGCGCGCCAATTTTTCAGAAGCTCAAGTCGCGAGGTTTTTGTGTTCCCCATGGCCGAAGCTTCTTCCAAAGACGACCTACTCCAGCTGATCAAGCGCTTCGGGGCTTATCTCACTCTCAAGATCTCTAATTTCCTCCCTATCTCTCTCTACAATCTGGTTCGTAATCTCTAACCCTGTTTTTTCTTCGTCTCTTCGTTTTTCGATAGATCTGACAGCTTTTAGGTTCCAATTTCTGTTTTAGCCTTTTCTTTTTACTCTTCTTTTGCTTACTTGTGTGTTCTGTTCATTTCTTAACCCTTTTTTGTTCGAGCTGTGGACTACTTTCTTGTAAATTATATGCTTCAATCACATGGTTAATGGTTTCTGTTATTCGATTTTCATTTTTGTATTCAATAATTCAACACTCTGACAAATGATGAAAAAATATTGCTTTTATTCTGCAGTACTCATGCTTCGAAGATATTATATTGTGTTCAATTATCATATGTAGGCCCATGCCAATTGGCGATTCTTTCAATTGTTACTCGAAATATTTCTCCCACAAAGATATAGTCAGCATTGAAGTGTTGAGTCCTTATGGAAAAATTAGATTAAAAAGGAAACAATGTCGAAGATTCTTTGAGCTTCTTAATGGACTCTAGTCTTTGGAACTTTTAGCACCGAGATATCAAGCTCCGTGTTAGGAAACCAGATTTTCAGCCTCATTTTTTCTTTTCATTTGGGTGTCCATAAAACCCAAAGAAAAGATAAACAAAACGTCTTAGCCAAAACAATAGCTCAATTCACTTTCTGTTTTGGTTTAAATAACTTGAATACTTTTTATGCTGTTGGCTTCTAAGAGTAATATGGTATGTAAATAAGTCTTTGAAATTTTATCAGGATTCACGATCTGTTGGGGCTATTGCTGGATTTGCTGTTGCAATAGTTTTTACATGGAGGCTGTTGAGATCACCTAATGGACATCAGAGACGGCAATCTAAAAGGCAAATGCCTGCACCTAGCAGCTCTACTTCTAGTGTTGGGTTAAATTCAAATGCACAATTAATATCTTCTGGAGATTGTTCATCTTCAGAGGATTTACGAGCGCAAAATGTTGTTGATGAATTCTTCCAACCAGTCAAGGTAAGAGCTCAAATTATTGCCGATATCTTGTCCTGCTTTTTCAATTTTATTCCATTCACATGACACACTTTTAATATATTCCGCTCATATCTTTTCCTTGTAGCCAACTCTGGGCCAAATAGTGAGGCAAAAGTTGAGTGAAGGAAGAAAGGTAACCAATATTAACCCTCGTCGTCCATCTTTATCTTCTCAGAAGTTTTACTCATTTCTAAAATTTTGGTGAAATATCAATAAATGACATTGTATGAGGTAAGTGATATCAGGTGAGAAAGATTCAAACTTTTGGTACTGAAAATGTGCTATGTTTAGGTTACATGTCGTTTGCTTGGAATAATTCTTGAGGAAAACAGTCCAGAGGATCTGCAGGTATATAGCATTTTTCTCTGAACAAATTTTGTGCTTGAACTGCTGTAGGGAATATCTAATTGGTTTACGTTGTTTTGCATCAGAAACAAGCAACTGTGAGGTCCTCGGTATTGGAAGTACTATTGGAGATAACGAAATATTGTGATCTTTATCTCATGGAAACGGTGCTGGATGATGAGAGTGAAGTGAGTGCAATGCTTCATGGAATTTTATGATTTTCCTGCATAATGTCTTGATAAATTTAGATATATGATTTCTGATAGGTGATTTGGTATAGTTCTAACGACGATAGTGCCTATCAGAAATGGGGCTCCTTGAAGTCAAAATCTCTCCCCATTTTCGTTTACTTGTCTATAAGATTATGCATATGCTGTCACATGATTAGGATGTCAGATTATTTTTATCCCTCCACTCATGCGTAAACTAGAGATTGAAAAATCTATCAAACTTGGCAAACTGCACAATCCCTGTTTTAAAAAACCAACTGAATACTTCATAAATCTCCTTGAACGTAGGAACTTGAAAATTCAAATATCACTTTGGTTGCTCTGGCAGGTATTGCATTTGCATGTTTCCTTAGGAATTTTGGGTTCCTCTATATTCTTCTATCCTCTAGTCTTAGGAGGAGTACCTTGACTTGATTTGTCAATTTTATGCTTAAATTTTCAATTTCTTCCAAATAGACCCTAAAATTGAACTACTGATTTAATTATTGTCTCTTCAAAACTGGAAAAAAAAAAAAGAAAAGACATGAATCGATGAATACATTCATTGAATTCAACCAACAAAAATACTGAAGATCATACCATGGAAATGTCCTAATACCACGAAAAGCTCAATCTTAGCAACAAATTTAAGTAATGGTAGTGCTTGAGATCAACTATACAATGCTAAAATAGTGCTAAAAAGCTCTCAACATGACCAAAAGAATCAATGCAGTATAGTCGGGTCACAAGAATGCTTCTAATGAGCAGAAAATTTCAACAAGAAAAAGTTGCAAGTTTGACTTAGTTGAGGGTACTAAATGCACCAACTTATTGAAGTTCAGGTTTGATTGGATGCAAATGTTAAGTTGTAAAATTGTTAAACTGAACGGGGAAAATTGATTTTTCTTTTTCGATGTATTCTTAAGGTAGGGTTGGTGATAGCGTTGGCTGTGTTAACGGGTTTTGAAATATCATAGAAACTTGATTTAGATAGGTGCTTGATACAATATATTGTTTTTTTTTCTTCTTGCTGATCTCAAATGCAATATGTTATTCTTCTTTCTAATAAGAGACACTATAAACCATTTATGCAGAAAAGAGTTCTTTCAGCACTTGAAGATGCCGGGGTTTTCACATCTGGTGGTCTGGTAAAAGACAAGGTGCTAAATCTGTGTTGTTTTGACTTCGACAGTATTAAAATGACTCTGATAATTTTATTCTCTTCTCTGAATTACTGAAGTACAAAGTTTGGGCAATGTTGGGCTTCTGTTGGCTACGTTAGGGAATTTTTAACTTTCGGCATTAAGTTGTTTTCCTGTTTCTAAAAAAAGATATAACAGGAAATATCTGAAGGTAGAAACATGTTAACAAACTACAGCTTATGCTTTAGTGACTTTGTGAGATCTCATATTGGTTGAGGAGGAGAACGAAACATTTTTTTAGAAGGATGTGGAAACTTCTTCTTAGCAGACGTGTTTTAAAAACCTTGAGAAAAATTTCGTAAGGAAAAGTCTAAAGAGGACAATATCTACTAGTAGTGGGCTTAGTCGGTTACAAACTTGGTAATTGCACAAGCTTTGGTTGGAAGCAAATCATCTCTTGAATTGTTTGGTGTTAGCATGGGTATAAGTAGGGACAGCCATATATGGCAATTTGTTTTTCTTGTAATTAATTGAGGATTATTTGTAGGTTCTCTTCTGTAGCAAGGAGAATGGACGAACATCTTTCGTGCGTCAACTGGAACCCGATTGGCATATAGATTCCAATCCCGAAATCGTCTCGCAGTTGGCTGTAAGTTAATCTCCCATCACCTTAGAAAGTTTATTGTTCTCTATCGTCTGTAAATACATGGTGGTTACTGATACCTTTTGCATAAACATCATCAGAGGTTCATCAAATATCAACTTCATGTAGCTGCAACCCGACACGAGCGGACCGGTTCTAACGTTTTCAGCTCTCCATCCTTGGAACAGTTCTTTGGAAACATTTAACTGGAAACCCAGTTCAGGAATGGAATTAATTTTCAAAATATTTTCTCCATTTTATTTGGGCCTTGTTGGTTGTAAGTGCAATGGTTCTCTATGGGCTAGAGAACCAAGCAAAGCTGAGTTTGGGTATTAGCACAGATAGGTGTATCATGTCTTTTCTCTTGTTTCTGCAAAGATCTTCTGAGTTGATCTTGTGTTATATTTGACATAGCAACTTCATGTCCCATTAAAAGCTCCAAATTTAGCTGATATATGTAATAATATATATTATTTATTAGATCATCTCAAATATTGTTGCCACAAATAGGCTCTCTTTAAAGTTCATAACTATGTCGATACGAGTAGACATGTATCGGAAACAAGGAATCAAG

mRNA sequence

CGTGTGGGCGACAGGAAAAAATAGGGAACCTCATTAACATTTCAACATCAGTATCAGCCATTGACGCCATAGCTCGCTTCCTTCTTCTGCTTCCAAATCCCTCTACTGCTCAACTAACTTTGACGCCTCAATAATTCCATTTCGATTCTTCTATCCGCTTCCTTCTTCTGCTGGGCGCGCCAATTTTTCAGAAGCTCAAGTCGCGAGGTTTTTGTGTTCCCCATGGCCGAAGCTTCTTCCAAAGACGACCTACTCCAGCTGATCAAGCGCTTCGGGGCTTATCTCACTCTCAAGATCTCTAATTTCCTCCCTATCTCTCTCTACAATCTGGATTCACGATCTGTTGGGGCTATTGCTGGATTTGCTGTTGCAATAGTTTTTACATGGAGGCTGTTGAGATCACCTAATGGACATCAGAGACGGCAATCTAAAAGGCAAATGCCTGCACCTAGCAGCTCTACTTCTAGTGTTGGGTTAAATTCAAATGCACAATTAATATCTTCTGGAGATTGTTCATCTTCAGAGGATTTACGAGCGCAAAATGTTGTTGATGAATTCTTCCAACCAGTCAAGGTTACATGTCGTTTGCTTGGAATAATTCTTGAGGAAAACAGTCCAGAGGATCTGCAGAAACAAGCAACTGTGAGGTCCTCGGTATTGGAAGTACTATTGGAGATAACGAAATATTGTGATCTTTATCTCATGGAAACGGTGCTGGATGATGAGAGTGAAAAAAGAGTTCTTTCAGCACTTGAAGATGCCGGGGTTTTCACATCTGGTGGTCTGGTAAAAGACAAGGTTCTCTTCTGTAGCAAGGAGAATGGACGAACATCTTTCGTGCGTCAACTGGAACCCGATTGGCATATAGATTCCAATCCCGAAATCGTCTCGCAGTTGGCTAGGTTCATCAAATATCAACTTCATGTAGCTGCAACCCGACACGAGCGGACCGGTTCTAACGTTTTCAGCTCTCCATCCTTGGAACAGTTCTTTGGAAACATTTAACTGGAAACCCAGTTCAGGAATGGAATTAATTTTCAAAATATTTTCTCCATTTTATTTGGGCCTTGTTGGTTGTAAGTGCAATGGTTCTCTATGGGCTAGAGAACCAAGCAAAGCTGAGTTTGGGTATTAGCACAGATAGGTGTATCATGTCTTTTCTCTTGTTTCTGCAAAGATCTTCTGAGTTGATCTTGTGTTATATTTGACATAGCAACTTCATGTCCCATTAAAAGCTCCAAATTTAGCTGATATATGTAATAATATATATTATTTATTAGATCATCTCAAATATTGTTGCCACAAATAGGCTCTCTTTAAAGTTCATAACTATGTCGATACGAGTAGACATGTATCGGAAACAAGGAATCAAG

Coding sequence (CDS)

ATGGCCGAAGCTTCTTCCAAAGACGACCTACTCCAGCTGATCAAGCGCTTCGGGGCTTATCTCACTCTCAAGATCTCTAATTTCCTCCCTATCTCTCTCTACAATCTGGATTCACGATCTGTTGGGGCTATTGCTGGATTTGCTGTTGCAATAGTTTTTACATGGAGGCTGTTGAGATCACCTAATGGACATCAGAGACGGCAATCTAAAAGGCAAATGCCTGCACCTAGCAGCTCTACTTCTAGTGTTGGGTTAAATTCAAATGCACAATTAATATCTTCTGGAGATTGTTCATCTTCAGAGGATTTACGAGCGCAAAATGTTGTTGATGAATTCTTCCAACCAGTCAAGGTTACATGTCGTTTGCTTGGAATAATTCTTGAGGAAAACAGTCCAGAGGATCTGCAGAAACAAGCAACTGTGAGGTCCTCGGTATTGGAAGTACTATTGGAGATAACGAAATATTGTGATCTTTATCTCATGGAAACGGTGCTGGATGATGAGAGTGAAAAAAGAGTTCTTTCAGCACTTGAAGATGCCGGGGTTTTCACATCTGGTGGTCTGGTAAAAGACAAGGTTCTCTTCTGTAGCAAGGAGAATGGACGAACATCTTTCGTGCGTCAACTGGAACCCGATTGGCATATAGATTCCAATCCCGAAATCGTCTCGCAGTTGGCTAGGTTCATCAAATATCAACTTCATGTAGCTGCAACCCGACACGAGCGGACCGGTTCTAACGTTTTCAGCTCTCCATCCTTGGAACAGTTCTTTGGAAACATTTAA

Protein sequence

MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRSPNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPVKVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETVLDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQLARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI

Homology

[Close]

BLAST of CmoCh20G006100 vs. ExPASy Swiss-Prot
Match: Q9LSX7 (Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.6e-85
Identity = 177/283 (62.54%), Postives = 213/283 (75.27%), Query Frame = 0


Query: 1   MAEASS---KDDLLQLIKRFGAYLTLKISN-FLPISLYNLDSRSVGAIAGFAVAIVFTWR 60
           MAE+SS    +++++LIKR  AY+  K+S+ F   S+ NLDSRS+GAIAG A+A++FTWR
Sbjct: 1   MAESSSPSPTEEIVRLIKRLSAYVAFKMSSLFSTTSIRNLDSRSIGAIAGLAIAVIFTWR 60

Query: 61  LLRSP-NGHQRRQSKRQM-PAPSSSTSSVGLNSN-AQLISSGDCSSSEDLRAQNVVDEFF 120
            +R+P    QRRQ KR++  A +SS ++    SN A  ++    S  ED   Q+VVD+FF
Sbjct: 61  AIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQFF 120

Query: 121 QPV----------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCD 180
           QPV                KVTCRLLG+ILEE SPE+LQKQATVRSSVLEVLLEITKY D
Sbjct: 121 QPVKPTLGQIVRQKLSEGRKVTCRLLGVILEETSPEELQKQATVRSSVLEVLLEITKYSD 180

Query: 181 LYLMETVLDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDS 240
           LYLME VLDDESE +VL ALE+AGVFTSGGLVKDKVLFCS E GRTSFVRQLEPDWHID+
Sbjct: 181 LYLMERVLDDESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWHIDT 240

Query: 241 NPEIVSQLARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           NPEI +QLARFIKYQLHVA  + ERT  NVF+S S+EQFFG++
Sbjct: 241 NPEISTQLARFIKYQLHVATVKPERTAPNVFTSQSIEQFFGSV 283

[Close]

BLAST of CmoCh20G006100 vs. ExPASy TrEMBL
Match: A0A6J1FYQ2 (peroxisome biogenesis protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111448952 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 260/276 (94.20%), Postives = 260/276 (94.20%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
           PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV    
Sbjct: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. ExPASy TrEMBL
Match: A0A6J1JAW0 (peroxisome biogenesis protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111484124 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.3e-135
Identity = 257/276 (93.12%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
           PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV    
Sbjct: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEE++PEDLQKQATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEESNPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVAA RHERTGSNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAAIRHERTGSNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. ExPASy TrEMBL
Match: A0A5A7TGS1 (Peroxisome biogenesis protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold266G00120 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.5e-124
Identity = 238/276 (86.23%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLK+SNF PISL NLDSRSVGAIAGFAVAI+FTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
            NGHQR+Q KRQMPAPSSSTS+VGLNSN Q I SG CSSSEDLRA NVVDEFFQPV    
Sbjct: 61  SNGHQRQQPKRQMPAPSSSTSNVGLNSNEQSIPSGVCSSSEDLRAHNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEE SPEDLQK+ATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEEYSPEDLQKRATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCS ENGRTSFVRQLEPDWHIDSNPEI++Q
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSTENGRTSFVRQLEPDWHIDSNPEIITQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVA  RHER+ SNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAPIRHERSASNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. ExPASy TrEMBL
Match: A0A5D3BET8 (Peroxisome biogenesis protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00260 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 237/276 (85.87%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLK+SNF PISL NLDSRSVGAIAGFAVAI+FTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
            NGHQR+Q KRQMPAPSSSTS+VGLNSN Q I SG CSSSEDLRA NVVDEFFQPV    
Sbjct: 61  SNGHQRQQPKRQMPAPSSSTSNVGLNSNEQSIPSGVCSSSEDLRAHNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEE SPEDLQK+A+VRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEEYSPEDLQKRASVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCS ENGRTSFVRQLEPDWHIDSNPEI++Q
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSTENGRTSFVRQLEPDWHIDSNPEIITQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVA  RHER+ SNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAPIRHERSASNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. ExPASy TrEMBL
Match: A0A1S3C2J1 (peroxisome biogenesis protein 22 OS=Cucumis melo OX=3656 GN=LOC103495938 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 237/276 (85.87%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLK+SNF PISL NLDSRSVGAIAGFAVAI+FTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
            NGHQR+Q KRQMPAPSSSTS+VGLNSN Q I SG CSSSEDLRA NVVDEFFQPV    
Sbjct: 61  SNGHQRQQPKRQMPAPSSSTSNVGLNSNEQSIPSGVCSSSEDLRAHNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEE SPEDLQK+A+VRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEEYSPEDLQKRASVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCS ENGRTSFVRQLEPDWHIDSNPEI++Q
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSTENGRTSFVRQLEPDWHIDSNPEIITQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVA  RHER+ SNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAPIRHERSASNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. NCBI nr
Match: XP_022944520.1 (peroxisome biogenesis protein 22 [Cucurbita moschata] >KAG6570872.1 Peroxisome biogenesis protein 22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 495.4 bits (1274), Expect = 3.1e-136
Identity = 260/276 (94.20%), Postives = 260/276 (94.20%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
           PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV    
Sbjct: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. NCBI nr
Match: XP_023512374.1 (peroxisome biogenesis protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135
Identity = 259/276 (93.84%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
           PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV    
Sbjct: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVAA RHERTGSNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAAIRHERTGSNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. NCBI nr
Match: XP_022986361.1 (peroxisome biogenesis protein 22-like [Cucurbita maxima])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 257/276 (93.12%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
           PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV    
Sbjct: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEE++PEDLQKQATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEESNPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVAA RHERTGSNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAAIRHERTGSNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. NCBI nr
Match: XP_038902771.1 (peroxisome biogenesis protein 22 [Benincasa hispida])

HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125
Identity = 240/276 (86.96%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAE SSKDDLLQLIKRFGAYLTLKISNF PIS  NLDSRSVGAI GFAVAI+FTWRLLRS
Sbjct: 1   MAETSSKDDLLQLIKRFGAYLTLKISNFFPISFQNLDSRSVGAITGFAVAIIFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
           PNGHQRRQ KRQMPAPSSSTS+VGLNSNAQ ++S  CSSSEDLRA NVVDEFFQPV    
Sbjct: 61  PNGHQRRQPKRQMPAPSSSTSTVGLNSNAQSVTSEVCSSSEDLRAHNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCS ENGRTSFVRQLEPDWHIDSNPEI++Q
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSMENGRTSFVRQLEPDWHIDSNPEIITQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVA  RHERT SNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAPIRHERTASNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. NCBI nr
Match: KAA0042433.1 (peroxisome biogenesis protein 22 [Cucumis melo var. makuwa])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 238/276 (86.23%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MAEASSKDDLLQLIKRFGAYLTLKISNFLPISLYNLDSRSVGAIAGFAVAIVFTWRLLRS 60
           MAEASSKDDLLQLIKRFGAYLTLK+SNF PISL NLDSRSVGAIAGFAVAI+FTWRLLRS
Sbjct: 1   MAEASSKDDLLQLIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLLRS 60

Query: 61  PNGHQRRQSKRQMPAPSSSTSSVGLNSNAQLISSGDCSSSEDLRAQNVVDEFFQPV---- 120
            NGHQR+Q KRQMPAPSSSTS+VGLNSN Q I SG CSSSEDLRA NVVDEFFQPV    
Sbjct: 61  SNGHQRQQPKRQMPAPSSSTSNVGLNSNEQSIPSGVCSSSEDLRAHNVVDEFFQPVKPTL 120

Query: 121 ------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCDLYLMETV 180
                       KVTCRLLGIILEE SPEDLQK+ATVRSSVLEVLLEITKYCDLYLMETV
Sbjct: 121 GQIVRQKLSEGRKVTCRLLGIILEEYSPEDLQKRATVRSSVLEVLLEITKYCDLYLMETV 180

Query: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDSNPEIVSQ 240
           LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCS ENGRTSFVRQLEPDWHIDSNPEI++Q
Sbjct: 181 LDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSTENGRTSFVRQLEPDWHIDSNPEIITQ 240

Query: 241 LARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           LARFIKYQLHVA  RHER+ SNVFSSPSLEQFFGNI
Sbjct: 241 LARFIKYQLHVAPIRHERSASNVFSSPSLEQFFGNI 276

[Close]

BLAST of CmoCh20G006100 vs. TAIR 10
Match: AT3G21865.1 (peroxin 22 )

HSP 1 Score: 316.6 bits (810), Expect = 1.8e-86
Identity = 177/283 (62.54%), Postives = 213/283 (75.27%), Query Frame = 0


Query: 1   MAEASS---KDDLLQLIKRFGAYLTLKISN-FLPISLYNLDSRSVGAIAGFAVAIVFTWR 60
           MAE+SS    +++++LIKR  AY+  K+S+ F   S+ NLDSRS+GAIAG A+A++FTWR
Sbjct: 1   MAESSSPSPTEEIVRLIKRLSAYVAFKMSSLFSTTSIRNLDSRSIGAIAGLAIAVIFTWR 60

Query: 61  LLRSP-NGHQRRQSKRQM-PAPSSSTSSVGLNSN-AQLISSGDCSSSEDLRAQNVVDEFF 120
            +R+P    QRRQ KR++  A +SS ++    SN A  ++    S  ED   Q+VVD+FF
Sbjct: 61  AIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQFF 120

Query: 121 QPV----------------KVTCRLLGIILEENSPEDLQKQATVRSSVLEVLLEITKYCD 180
           QPV                KVTCRLLG+ILEE SPE+LQKQATVRSSVLEVLLEITKY D
Sbjct: 121 QPVKPTLGQIVRQKLSEGRKVTCRLLGVILEETSPEELQKQATVRSSVLEVLLEITKYSD 180

Query: 181 LYLMETVLDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSKENGRTSFVRQLEPDWHIDS 240
           LYLME VLDDESE +VL ALE+AGVFTSGGLVKDKVLFCS E GRTSFVRQLEPDWHID+
Sbjct: 181 LYLMERVLDDESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWHIDT 240

Query: 241 NPEIVSQLARFIKYQLHVAATRHERTGSNVFSSPSLEQFFGNI 261
           NPEI +QLARFIKYQLHVA  + ERT  NVF+S S+EQFFG++
Sbjct: 241 NPEISTQLARFIKYQLHVATVKPERTAPNVFTSQSIEQFFGSV 283

The following BLAST results are available for this feature:

BLAST of CmoCh20G006100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSX7	2.6e-85	62.54	Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 S...	[more]

BLAST of CmoCh20G006100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYQ2	1.5e-136	94.20	peroxisome biogenesis protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111448952 P...	[more]
A0A6J1JAW0	6.3e-135	93.12	peroxisome biogenesis protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC11148412...	[more]
A0A5A7TGS1	6.5e-124	86.23	Peroxisome biogenesis protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3BET8	1.9e-123	85.87	Peroxisome biogenesis protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C2J1	1.9e-123	85.87	peroxisome biogenesis protein 22 OS=Cucumis melo OX=3656 GN=LOC103495938 PE=4 SV...	[more]

BLAST of CmoCh20G006100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944520.1	3.1e-136	94.20	peroxisome biogenesis protein 22 [Cucurbita moschata] >KAG6570872.1 Peroxisome b...	[more]
XP_023512374.1	1.5e-135	93.84	peroxisome biogenesis protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986361.1	1.3e-134	93.12	peroxisome biogenesis protein 22-like [Cucurbita maxima]	[more]
XP_038902771.1	1.4e-125	86.96	peroxisome biogenesis protein 22 [Benincasa hispida]	[more]
KAA0042433.1	1.3e-123	86.23	peroxisome biogenesis protein 22 [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh20G006100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21865.1	1.8e-86	62.54	peroxin 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..86
None	No IPR available	PANTHER	PTHR34126:SF3	PEROXISOME BIOGENESIS PROTEIN 22	coord: 5..259
IPR037485	Peroxisome biogenesis protein 22	PANTHER	PTHR34126	PEROXISOME BIOGENESIS PROTEIN 22	coord: 5..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G006100.1	CmoCh20G006100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007031	peroxisome organization
cellular_component	GO:0016021	integral component of membrane