CmoCh20G005150 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTGTGCTGCAGCCAGGCAGGCTCTTCAAATTAGCGCCACTCGAAAGAAGAGGTTGGAGGTGTTCAATCAGCAAGCGTTTCTGATTCTCTCTCAATCGCTCCCACAGCCTTCTCCTGCTTCGTCGGAGCCGGAGTTGGCGCCTTCTAGGTCTACTGAACGCTCCAATTCACGAACATGCCTGTCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGGTTCTTCTTCTTCTTCTTCTTCGCTATTGCTAGTTCCTTTTGTAGATGAATATGAATTGTTGTGTTATTGTGGCGCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTCCATAACTTGGTTTATTCCTCTTTCCTCTACATATTGCACCTATAATTGCACAAAATTGAACATAGGAATAGCCTAAAAGTTGAAGCATCTTGCATTCAATCGTGTTTAAGCCGACATCTAATCTTTATTTCTCGATGCTATTGCCCCGATAAAGCTGTTTTCGCAGATTAGACATATCAGACATCTCAAATTGATGGTTTCATTATCATCTGGCTTAGAATTAGAATCGAGTGTATTTATGTTGTCGTAGCTTTGTATATTTCCAGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGTGGATTTCCTTCCTCTTTTCCTCACCATTTCAACATCAATAAAATGCTTGAAATGCGCTCTAAACTTGGTATGGATACATGAATTTTCAGGACAGAAAACCGGTGGACAGGAACTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGGTAACTCTTGTTGCTTTCTCTTATTCGGTTCTGAAACTAGGAAATTGGCATGGAATGTGTTCAGGAATCAAATTTGCATGAAGCTATCTCTGCCTGTGTGGCACTGTAGCCGACATGAACTTTTCCCTTCAAGTCATCCGACTAGTTGAATCAGCTTCTGATGTTTTTTTGAATCATAGCATGTTGGAAAAATACAGCCATCTGGGGAGCTTAGACACTTGTTAATGACCATTACGTGTTAGAAATCACGGATCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCGTAGGCTTTGCTTTTAGTTTCCTCAAAAGGCCTCATACCAATGGAGATGTATTCCTTACTTATAAATCCATGATCATCCCCTTAATTAGTCAATGTAGGATCCCTCCCACAATCCTCACTAAGCTATTTGAAAATCTACCTTACTACGGGCTCAAATAATGACTTTTCCCCAATGAAAAGTTTCATACTTGATTTAAAATCCTCCATCTCACACGTAGTATGAGATCTTCATTGAAGCATGGAGTTCAGAATGCAGAATCCTTGATGGTTTTGTTTGTACACAAGCTGATCCAAACATAATTATTGATGTTGATTCCGAATGTTCTGTCTTTCCCCGGATACATGTTATCAGCTTATTGTTGAAGTTCGCTTTATATTCACTTGTCCATTTCTTGAGTTCAGAGTTTCCTAATTTAAGAAGATATCATTATTATGCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTATCATCTCTACTCTGCTAGTGCCTCTAATTTGAACACCTAAATGATTGTAATCTGTATATATGAGCCACAAGTTTCAGACGGTACATATGTCGGTTTTGAGTCATAGTTCAGTAGAATTATAATTTCACTGTCACACTAGAGTGTGTTAAGTCGTGTTCCAAATTGGGTTTTAAAAAGAATTAGGCCAAAAATTAGGATACATTTTGAGAAAATAAAACTTCTATCGAAGAAGAGGAAGGCTTTCATAAAATTTCTCGTAGAATCTTGAATGAAGTTTTCATTTTGTACATGTCAGATCATGAATGAATAACTGCATCCAATCTCCAAAAAAATTCCTATTGTTTCAAACTTTTTCTTTTTGGAGTGGAACTTTCTCTTTTCCTCCTACCCCTTCACATTATGGTTTAATGAATATCTCAGGAAGAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCGGATAACAGATGGTATAGTGTAGTTCTAACTTGAAATACTCCACAGCATATTATGATGATCATCTCAAGTGAGTTACAACAATGGGCTATGCAGGCACAGTTACTTCCTAAAGATGGCTGGCGATGTTGAAGAATCCTCAACTAGCACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCCTCCTCAACCCACACTTACCTTTTCAAGTTTCATTCTAGGTTTAATCTATCCATTTCACAATTTGGACCATGATTTATGTTCCTAGGATTCTTCTGTTGTATTAATTTGTTTATGACACGTTTGATGTTCCTTATGTCATGTTACATGGAGTTTTGTGTTTTAGTACTTCAAAATTCCTCCTCTCATAACTAAACAAGCAAGAACATGATAATGATTTTATTTTTTATCTACATAAAGCGATTTTAATTTCCA CCTGTGCTGCAGCCAGGCAGGCTCTTCAAATTAGCGCCACTCGAAAGAAGAGGTTGGAGGTGTTCAATCAGCAAGCGTTTCTGATTCTCTCTCAATCGCTCCCACAGCCTTCTCCTGCTTCGTCGGAGCCGGAGTTGGCGCCTTCTAGGTCTACTGAACGCTCCAATTCACGAACATGCCTGTCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTCCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGACAGAAAACCGGTGGACAGGAACTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGAAGAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCGGATAACAGATGGCACAGTTACTTCCTAAAGATGGCTGGCGATGTTGAAGAATCCTCAACTAGCACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTTCCTCCTCAACCCACACTTACCTTTTCAAGTTTCATTCTAGGTTTAATCTATCCATTTCACAATTTGGACCATGATTTATGTTCCTAGGATTCTTCTGTTGTATTAATTTGTTTATGACACGTTTGATGTTCCTTATGTCATGTTACATGGAGTTTTGTGTTTTAGTACTTCAAAATTCCTCCTCTCATAACTAAACAAGCAAGAACATGATAATGATTTTATTTTTTATCTACATAAAGCGATTTTAATTTCCA ATGCCTGTCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTCCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGACAGAAAACCGGTGGACAGGAACTTGTTGGTGGGCTGGATTGTACTGTTCATAGAAACTTCTTTGGAAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGATCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGCATTCAGATTCCTCTGGTGAAGGCAAAGAGGAAGAAGGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCGGATAACAGATGGCACAGTTACTTCCTAAAGATGGCTGGCGATGTTGAAGAATCCTCAACTAGCACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAAAAACCAAAGATCGACCTTCCGATTTTTCTTTAG MPVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLADLHNLFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILEVGSDVQVLAHCPVSSNSSLHSDSSGEGKEEEGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSTSTAADIVDNDSRFEKPKIDLPIFL Homology
BLAST of CmoCh20G005150 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 1.5e-98 Identity = 181/252 (71.83%), Postives = 213/252 (84.52%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy Swiss-Prot
Match: Q3Z8V9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pdxT PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.6e-44 Identity = 103/218 (47.25%), Postives = 133/218 (61.01%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy Swiss-Prot
Match: A9WFU0 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=pdxT PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.8e-44 Identity = 98/215 (45.58%), Postives = 129/215 (60.00%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy Swiss-Prot
Match: B9LIK4 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) OX=480224 GN=pdxT PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.8e-44 Identity = 98/215 (45.58%), Postives = 129/215 (60.00%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy Swiss-Prot
Match: B8G664 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=pdxT PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.1e-43 Identity = 98/215 (45.58%), Postives = 128/215 (59.53%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy TrEMBL
Match: A0A6J1FUQ8 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111448973 PE=3 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy TrEMBL
Match: A0A6J1JFE0 (Glutaminase OS=Cucurbita maxima OX=3661 GN=LOC111483918 PE=3 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 3.3e-133 Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy TrEMBL
Match: A0A6J1H447 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 6.5e-121 Identity = 224/251 (89.24%), Postives = 237/251 (94.42%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy TrEMBL
Match: A0A1S3CLW1 (Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 6.5e-121 Identity = 223/251 (88.84%), Postives = 239/251 (95.22%), Query Frame = 0
BLAST of CmoCh20G005150 vs. ExPASy TrEMBL
Match: A0A0A0KAR5 (Glutaminase OS=Cucumis sativus OX=3659 GN=Csa_6G139790 PE=3 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120 Identity = 224/251 (89.24%), Postives = 238/251 (94.82%), Query Frame = 0
BLAST of CmoCh20G005150 vs. NCBI nr
Match: XP_022944556.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita moschata] >KAG7010623.1 putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 498.8 bits (1283), Expect = 2.7e-137 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmoCh20G005150 vs. NCBI nr
Match: KAG6570776.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 495.7 bits (1275), Expect = 2.3e-136 Identity = 249/251 (99.20%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of CmoCh20G005150 vs. NCBI nr
Match: XP_023511885.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135 Identity = 247/251 (98.41%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of CmoCh20G005150 vs. NCBI nr
Match: XP_022986058.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita maxima]) HSP 1 Score: 484.2 bits (1245), Expect = 6.9e-133 Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of CmoCh20G005150 vs. NCBI nr
Match: XP_023534477.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 444.5 bits (1142), Expect = 6.0e-121 Identity = 224/251 (89.24%), Postives = 238/251 (94.82%), Query Frame = 0
BLAST of CmoCh20G005150 vs. TAIR 10
Match: AT5G60540.1 (pyridoxine biosynthesis 2 ) HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99 Identity = 181/252 (71.83%), Postives = 213/252 (84.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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