CmoCh20G005130 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G005130
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	Cmo_Chr20: 2456641 .. 2457497 (+)
RNA-Seq Expression	CmoCh20G005130
Synteny	CmoCh20G005130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAGAAGAGGTTTTCATGGTTGTCCAAAATGAAGAAGAAACAATACTCCAACCATTTCTATCTCCACATTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACTGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGGTTTTCCCGCTCGTTGTCTTCTTGTTGTTGTTCTTCAATAACTTATCCAATTTAATTTTAGAAATCTGAAGTCGCCTCAACTGAGAAGATTAGGACTGCTGCAGTTGCGATGAATGCCCAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCGCAAGAAGGTGAAAATTTCCGTCTTCTTGTTTAATTGAAGATGGTGAGATAGAATTTGAAGTTAGGGCTTTCTCTGTTCTGGTTTCTTTTCTTAATCTCCATGAATGTGATTGTTTATGATTATAGGTTAAAGGTGTTCCGAAAGAAGAGCTCGAAGTCGGAGATGATCTTGTTCTTGCGCTTCAAGAGAGGATTAAAGCGATACCAGATAGGAGTACCTCAGGAGCCAAGCAATCTGGAGGATGGGCGTCCTCCGCCTCATCTAACAATATCAAATTTGATTTATCAGGTTTTACGCACTTTAGATGGAAACTTTGAGAGCGAGTATTTCCAGCAAAGTGAAGAATCAAGTCAATTTCGAAACGAGTATGACATGCGGAAGATGAAACGGGCCTG

mRNA sequence

GGAGAGAAGAGGTTTTCATGGTTGTCCAAAATGAAGAAGAAACAATACTCCAACCATTTCTATCTCCACATTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACTGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGATTAGGACTGCTGCAGTTGCGATGAATGCCCAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCGCAAGAAGGTTAAAGGTGTTCCGAAAGAAGAGCTCGAAGTCGGAGATGATCTTGTTCTTGCGCTTCAAGAGAGGATTAAAGCGATACCAGATAGGAGTACCTCAGGAGCCAAGCAATCTGGAGGATGGGCGTCCTCCGCCTCATCTAACAATATCAAATTTGATTTATCAGGTTTTACGCACTTTAGATGGAAACTTTGAGAGCGAGTATTTCCAGCAAAGTGAAGAATCAAGTCAATTTCGAAACGAGTATGACATGCGGAAGATGAAACGGGCCTG

Coding sequence (CDS)

ATGAAGAAGAAACAATACTCCAACCATTTCTATCTCCACATTTCTGCTTCATTCTTCCTCCTGCCCTTGTTCTTCATCTCCCTCGCCTATGCCAAGATCACTGTAATCGATCTCATCTTCCGAGTAGATTCCGTTTGCCAGAGATACGAGAAGTATGATGTTCAGAAACAGCGCGAGCTCAATGCTTATGGTGATGGTGTCTTTTCTCGCCTCTTCGCTGCCGTTGAACTCGAAATCCATGCCGCTCTTCAGATTAGGACTGCTGCAGTTGCGATGAATGCCCAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTGCCGAAACTTTGTAAATTGGCTCGCAAGAAGGTTAAAGGTGTTCCGAAAGAAGAGCTCGAAGTCGGAGATGATCTTGTTCTTGCGCTTCAAGAGAGGATTAAAGCGATACCAGATAGGAGTACCTCAGGAGCCAAGCAATCTGGAGGATGGGCGTCCTCCGCCTCATCTAACAATATCAAATTTGATTTATCAGGTTTTACGCACTTTAGATGGAAACTTTGA

Protein sequence

MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFTHFRWKL

Homology

[Close]

BLAST of CmoCh20G005130 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.7e-32
Identity = 79/151 (52.32%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID++ RVDS+C++Y+KYDV KQRE N  GD  F+RL+ A E +I  AL+        
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA++RR KARL +EVPKL +LA K+VKG+  EEL   +DLVLAL  RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 153 PDRSTSGAKQSGGW--ASSASSNNIKFDLSG 173
           PD +  G K +  W  +S+ S  +IKFD  G
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDG 151

[Close]

BLAST of CmoCh20G005130 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31
Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 35  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QI 94
           VID+IFRVD +C++Y+KYD+ K RE+ A GD  FSRLF +++ +I A L         + 
Sbjct: 3   VIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKN 62

Query: 95  RTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPD 154
           R AAVAMNA+VRR KARL ++V KL KLA KK+KG+ +EE E   DLV+AL +R++AIPD
Sbjct: 63  RAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPD 122

Query: 155 RSTSGAKQSGG-W-ASSASSNNIKFDLS 172
            +  GAKQ+   W  +SA + NIKFD+S
Sbjct: 123 GNEHGAKQANSDWGGASAPNKNIKFDMS 150

[Close]

BLAST of CmoCh20G005130 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.7e-31
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 35  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------I 94
           VIDLI RVDS+C++YEKYD+ +QR+ N  GD  FSRL++AVE  +   LQ          
Sbjct: 3   VIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETN 62

Query: 95  RTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPD 154
           +  AVAMNA++RR KARL++ +PKL +L+ KKVKG+ KEEL+  +DLVL+L+++I+AIP+
Sbjct: 63  KAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPE 122

Query: 155 RSTSGAKQSGGWASSASSNNIKFD 170
              S A   GGW +S S +NI+FD
Sbjct: 123 ---SSAPVVGGWEASTSYSNIRFD 143

[Close]

BLAST of CmoCh20G005130 vs. ExPASy TrEMBL
Match: A0A0A0KFY5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G294430 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.6e-52
Identity = 116/153 (75.82%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID+IFRVDS+C++Y+KYDV+KQRELNAYGD  F+RLFAAVELEIHAALQ        
Sbjct: 1   MTVIDIIFRVDSICKKYDKYDVEKQRELNAYGDDAFARLFAAVELEIHAALQKSEVASTE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPKEELEV DDLVLAL+E+IKAI
Sbjct: 61  TNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVLALEEKIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD +TSGAK SGGW SS+SSNNIKFD S   +F
Sbjct: 121 PDGNTSGAKHSGGWGSSSSSNNIKFDSSSDGNF 153

[Close]

BLAST of CmoCh20G005130 vs. ExPASy TrEMBL
Match: A0A1S3CKB8 (syntaxin-71 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501939 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.5e-50
Identity = 115/153 (75.16%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID+IFRVDS+C++YEKYDV KQRELNAYGD  F+RLFAAVE EIHAALQ        
Sbjct: 1   MTVIDIIFRVDSICKKYEKYDVVKQRELNAYGDDAFARLFAAVEHEIHAALQKSEAASTE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPKEELEV DDLVLAL+E+IKAI
Sbjct: 61  TNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVLALEEKIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD  TSGAK SGGW SS+S NNIKFD S   +F
Sbjct: 121 PDGKTSGAKHSGGWGSSSSFNNIKFDSSSDGNF 153

[Close]

BLAST of CmoCh20G005130 vs. ExPASy TrEMBL
Match: A0A1S3CKC3 (syntaxin-71 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501939 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.5e-50
Identity = 115/153 (75.16%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID+IFRVDS+C++YEKYDV KQRELNAYGD  F+RLFAAVE EIHAALQ        
Sbjct: 1   MTVIDIIFRVDSICKKYEKYDVVKQRELNAYGDDAFARLFAAVEHEIHAALQKSEAASTE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPKEELEV DDLVLAL+E+IKAI
Sbjct: 61  TNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVLALEEKIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD  TSGAK SGGW SS+S NNIKFD S   +F
Sbjct: 121 PDGKTSGAKHSGGWGSSSSFNNIKFDSSSDGNF 153

[Close]

BLAST of CmoCh20G005130 vs. ExPASy TrEMBL
Match: A0A6J1CFN2 (syntaxin-71-like OS=Momordica charantia OX=3673 GN=LOC111011250 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.6e-49
Identity = 113/153 (73.86%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL--------- 92
           +TVID+IFRVD++CQ+Y+KYDV+KQRELNAYGD VF+RLFAAVELEI AAL         
Sbjct: 1   MTVIDIIFRVDAICQKYDKYDVEKQRELNAYGDDVFARLFAAVELEIEAALKKSETAATE 60

Query: 93  QIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
           + R +AVAMNA+VRRKKARLMDEVPKL KLARKKVKGVPKEEL V  DLVLAL+ERIKAI
Sbjct: 61  KNRASAVAMNAEVRRKKARLMDEVPKLHKLARKKVKGVPKEELAVRGDLVLALEERIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD +TS  KQSGGWASS+SS NIKFD S   +F
Sbjct: 121 PDGATSAGKQSGGWASSSSSKNIKFDSSSDGNF 153

[Close]

BLAST of CmoCh20G005130 vs. ExPASy TrEMBL
Match: A0A6J1K481 (syntaxin-71-like OS=Cucurbita maxima OX=3661 GN=LOC111491035 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.4e-48
Identity = 115/153 (75.16%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID+IFRVDS+C++YEKYDV+KQRELNAYGD VF+RL+AAVELEI AALQ        
Sbjct: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA+VRRKKARLMDEVPKL KLARKK+KGVPKEELEV  DLVLAL+ERIKAI
Sbjct: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD ST+G K SGGWAS+ SSNNIKFD +   HF
Sbjct: 121 PDGSTTG-KPSGGWAST-SSNNIKFDSTTDGHF 151

[Close]

BLAST of CmoCh20G005130 vs. NCBI nr
Match: KAG7010621.1 (Syntaxin-71, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.9 bits (803), Expect = 8.8e-82
Identity = 166/171 (97.08%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQREL 60
           MKKKQYSNHFYLH+SASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQREL
Sbjct: 1   MKKKQYSNHFYLHVSASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQREL 60

Query: 61  NAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKG 120
           NAYGDGVFSRLFAAVELE HAALQIR AAVAMNA+VRRKKARLMDEVPKLCKLA KKVKG
Sbjct: 61  NAYGDGVFSRLFAAVELETHAALQIRAAAVAMNAEVRRKKARLMDEVPKLCKLALKKVKG 120

Query: 121 VPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLS 172
           VPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLS
Sbjct: 121 VPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLS 171

[Close]

BLAST of CmoCh20G005130 vs. NCBI nr
Match: XP_023512260.1 (syntaxin-71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 2.2e-64
Identity = 145/186 (77.96%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 4   KQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQRELNAY 63
           KQYSNHFYLHISASFFLLPLFFISL  AKIT+IDLIFRVDSVCQRYEKYDVQKQRELNAY
Sbjct: 72  KQYSNHFYLHISASFFLLPLFFISLTCAKITLIDLIFRVDSVCQRYEKYDVQKQRELNAY 131

Query: 64  GDGVFSRLFAAVELEIHAALQ---------IRTAAVAMNAQVRRKKARLMDEVPKLCKLA 123
           GDGVFSRLFAAVELEIHAALQ         IR AAVAMNA+VRRKKARLMDEVPKLCKLA
Sbjct: 132 GDGVFSRLFAAVELEIHAALQKSEVASTEKIRAAAVAMNAEVRRKKARLMDEVPKLCKLA 191

Query: 124 RKKVKGVPKEELEVGDDLVLALQERIKAIPDRSTSGAKQSGGWASSASSNNIKFDLSGFT 181
           RKKVKGVPKEELEVGDDLVLALQERIKAIP                           GFT
Sbjct: 192 RKKVKGVPKEELEVGDDLVLALQERIKAIP---------------------------GFT 230

[Close]

BLAST of CmoCh20G005130 vs. NCBI nr
Match: XP_011657220.1 (syntaxin-71 isoform X1 [Cucumis sativus] >KGN47387.2 hypothetical protein Csa_022933 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 9.5e-52
Identity = 116/153 (75.82%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID+IFRVDS+C++Y+KYDV+KQRELNAYGD  F+RLFAAVELEIHAALQ        
Sbjct: 1   MTVIDIIFRVDSICKKYDKYDVEKQRELNAYGDDAFARLFAAVELEIHAALQKSEVASTE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPKEELEV DDLVLAL+E+IKAI
Sbjct: 61  TNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVLALEEKIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD +TSGAK SGGW SS+SSNNIKFD S   +F
Sbjct: 121 PDGNTSGAKHSGGWGSSSSSNNIKFDSSSDGNF 153

[Close]

BLAST of CmoCh20G005130 vs. NCBI nr
Match: XP_031743863.1 (syntaxin-71 isoform X2 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 9.5e-52
Identity = 116/153 (75.82%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID+IFRVDS+C++Y+KYDV+KQRELNAYGD  F+RLFAAVELEIHAALQ        
Sbjct: 1   MTVIDIIFRVDSICKKYDKYDVEKQRELNAYGDDAFARLFAAVELEIHAALQKSEVASTE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA+VRRKKARLMDEVPKL KLA KKVKGVPKEELEV DDLVLAL+E+IKAI
Sbjct: 61  TNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRDDLVLALEEKIKAI 120

Query: 153 PDRSTSGAKQSGGWASSASSNNIKFDLSGFTHF 177
           PD +TSGAK SGGW SS+SSNNIKFD S   +F
Sbjct: 121 PDGNTSGAKHSGGWGSSSSSNNIKFDSSSDGNF 153

[Close]

BLAST of CmoCh20G005130 vs. NCBI nr
Match: KAG6570774.1 (Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 3.6e-51
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MKKKQYSNHFYLHISASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQREL 60
           MKKKQYSN+FYLH+SASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQREL
Sbjct: 1   MKKKQYSNNFYLHVSASFFLLPLFFISLAYAKITVIDLIFRVDSVCQRYEKYDVQKQREL 60

Query: 61  NAYGDGVFSRLFAAVELEIHAALQIRTAAVAMNAQVRRKKARLMDEVPKLCKLARKK 118
           NAYGDGVFSRLFAAVELEIHAALQIR AAVAMNA+VRRKKARLMDEVPKLCKLA KK
Sbjct: 61  NAYGDGVFSRLFAAVELEIHAALQIRAAAVAMNAEVRRKKARLMDEVPKLCKLALKK 117

[Close]

BLAST of CmoCh20G005130 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 )

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-33
Identity = 79/151 (52.32%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 33  ITVIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ-------- 92
           +TVID++ RVDS+C++Y+KYDV KQRE N  GD  F+RL+ A E +I  AL+        
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 93  -IRTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAI 152
             R AAVAMNA++RR KARL +EVPKL +LA K+VKG+  EEL   +DLVLAL  RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 153 PDRSTSGAKQSGGW--ASSASSNNIKFDLSG 173
           PD +  G K +  W  +S+ S  +IKFD  G
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDG 151

[Close]

BLAST of CmoCh20G005130 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 )

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-32
Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 35  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAAL---------QI 94
           VID+IFRVD +C++Y+KYD+ K RE+ A GD  FSRLF +++ +I A L         + 
Sbjct: 3   VIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKN 62

Query: 95  RTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPD 154
           R AAVAMNA+VRR KARL ++V KL KLA KK+KG+ +EE E   DLV+AL +R++AIPD
Sbjct: 63  RAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPD 122

Query: 155 RSTSGAKQSGG-W-ASSASSNNIKFDLS 172
            +  GAKQ+   W  +SA + NIKFD+S
Sbjct: 123 GNEHGAKQANSDWGGASAPNKNIKFDMS 150

[Close]

BLAST of CmoCh20G005130 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 )

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-32
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 35  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------I 94
           VIDLI RVDS+C++YEKYD+ +QR+ N  GD  FSRL++AVE  +   LQ          
Sbjct: 3   VIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETN 62

Query: 95  RTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPD 154
           +  AVAMNA++RR KARL++ +PKL +L+ KKVKG+ KEEL+  +DLVL+L+++I+AIP+
Sbjct: 63  KAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPE 122

Query: 155 RSTSGAKQSGGWASSASSNNIKFD 170
              S A   GGW +S S +NI+FD
Sbjct: 123 ---SSAPVVGGWEASTSYSNIRFD 143

[Close]

BLAST of CmoCh20G005130 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 )

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-32
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 35  VIDLIFRVDSVCQRYEKYDVQKQRELNAYGDGVFSRLFAAVELEIHAALQ---------I 94
           VIDLI RVDS+C++YEKYD+ +QR+ N  GD  FSRL++AVE  +   LQ          
Sbjct: 3   VIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSETN 62

Query: 95  RTAAVAMNAQVRRKKARLMDEVPKLCKLARKKVKGVPKEELEVGDDLVLALQERIKAIPD 154
           +  AVAMNA++RR KARL++ +PKL +L+ KKVKG+ KEEL+  +DLVL+L+++I+AIP+
Sbjct: 63  KAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAIPE 122

Query: 155 RSTSGAKQSGGWASSASSNNIKFD 170
              S A   GGW +S S +NI+FD
Sbjct: 123 ---SSAPVVGGWEASTSYSNIRFD 143

The following BLAST results are available for this feature:

BLAST of CmoCh20G005130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SF29	8.7e-32	52.32	Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1	[more]
Q94KK6	3.3e-31	52.70	Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1	[more]
Q94KK5	5.7e-31	51.39	Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1	[more]

BLAST of CmoCh20G005130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFY5	4.6e-52	75.82	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A1S3CKB8	2.5e-50	75.16	syntaxin-71 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501939 PE=3 SV=1	[more]
A0A1S3CKC3	2.5e-50	75.16	syntaxin-71 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501939 PE=3 SV=1	[more]
A0A6J1CFN2	1.6e-49	73.86	syntaxin-71-like OS=Momordica charantia OX=3673 GN=LOC111011250 PE=3 SV=1	[more]
A0A6J1K481	2.4e-48	75.16	syntaxin-71-like OS=Cucurbita maxima OX=3661 GN=LOC111491035 PE=3 SV=1	[more]

BLAST of CmoCh20G005130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010621.1	8.8e-82	97.08	Syntaxin-71, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512260.1	2.2e-64	77.96	syntaxin-71-like [Cucurbita pepo subsp. pepo]	[more]
XP_011657220.1	9.5e-52	75.82	syntaxin-71 isoform X1 [Cucumis sativus] >KGN47387.2 hypothetical protein Csa_02...	[more]
XP_031743863.1	9.5e-52	75.82	syntaxin-71 isoform X2 [Cucumis sativus]	[more]
KAG6570774.1	3.6e-51	95.73	Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh20G005130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09740.1	6.2e-33	52.32	syntaxin of plants 71	[more]
AT3G45280.1	2.4e-32	52.70	syntaxin of plants 72	[more]
AT3G61450.1	4.0e-32	51.39	syntaxin of plants 73	[more]
AT3G61450.2	4.0e-32	51.39	syntaxin of plants 73	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 35..170
None	No IPR available	PANTHER	PTHR19957:SF264	SYNTAXIN-73	coord: 35..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G005130.1	CmoCh20G005130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0061025	membrane fusion
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005484	SNAP receptor activity