CmoCh20G005050 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCGGAGGATCGAACCAAAGGAATAGGAAGAAGAACCCTAGAAAACTGAAAAGCAAGCGCACTGTTAACAGAAAATTACAGTAAAAAGTGGAGGCCGGAAAATTTCCGATGGCGCAAGATCGGAAGAGGCAGAGACCGAATATATTGATCACCGGAACTCCTGGAACCGGCAAGACAACAACGTCATCTGCTTTAGCAGACGCCGCTCAACTTCGTCATGTCTCCGTTGGGGACCTTGTGAAGGAGAAGAGTTTGCACGATGGCTGGGATGACGAACTCCAGTGCTATGTAATCAACGAAGATCTGGTTAGGTTTTTGCTTCTTTAATCCTTGCATGAACTGCTGATTTCATCGTCGTGTAAGCTATTGCGAATCGAGAGTGGTTTTAGACTTGATTCTTTTTTTCTAATGGTCTTTCCGTTGTATATAAGACGATGCTAACCTGCAGGTGCACTGAAACTTTCAGGTCTGCGATGAGTTGGAGGATTTGATGGACGAAGGTGGAATCATTGTGGATTATCACGGTTGTGATTTTTTTCCTGAGCGGTGGTTTGATCGTGTGGTTGTTCTCCAGACCGAGAACTCGATCTTGTATGATCGCTTGACGAAGAGGTAACAAAATTAAAGACTTCCTGTTTGTGATTATTCTGTTTGTGTATTTTGTTCCGCCATTTTGGCTCTCTACTCAAACGCTTGTGGAATTCTGTTTGTGGTGCAGGGGATACGATGGAGCTAAGCTTTCAAACAATATTGAATGCGAAATCTTTCAGATATTGCTCGAGGAAGCGAAGGAAAACTATCAGGAGAACATAGTGGTGGATCTAAGGAGTGACACTGTTGAAGATGTAGCTAGAAACGTTGAAACTCTGTCGAACTGGGTTAAGAATTGGCAACCTGTAAGCTAAGCAGATTAGAAAAGAAAGAAGAGATTACTTTCGCACCAGTTTCTTGATTTCGTTTTCATGTAAAGTAAAAGAAAGCCGCCTTTGCTGCATGATCGAATTGGGTTTCTTGCCAGATTTTTATAGTTATATATCTTCCCAATTCCTCATTATTTGGAGTATTTGTAAGCTGCCCTTTTCCTTCAGGTTTTACAAAGCTTTATCAATGAATGGATAAACGAAGAATTTTGCTAGGTGGAAGATCTAGCATGTCCATTGAAGATCGCTCAAGTCACATGGGAACAGGAAAATTGTCAAGCACTCAGCAAGCAAATATGGGCCTTTGAAGAAGGGTAATAAGTCATACACTTTTGTTGATCTTTGTATGAATGGGCTTTTGTCTGATTTGCATGGATGAAGACATTCGTGTGTGCACTCAGGTGAGTCCGGTGAATTTGTGGTCAATAAGTCATACACTCTTGTAGATCTTTGTATGAATGGGTTTTTGTCTGATTTGCATGGATGAAGACATTCGTGTGTGCACTCGGGTGAGTCCGTGGTCAATAAGTCATACACTCTTGTAGATCTTTGTATAAATGGGTTTTTCTCTGATTTGCATGGGTAAAGACATTCGTGTGTGCACTCGGGTGAGTCCGTGGTCAATAAGTCATACACTCTTGTAGATCTTTGTATGAATGGGCTTTTCTCTGATTTGCATGGATAAAGACATTCGTGTGTGCACTCGGGTGAGTCCGTGGTCAATAAGTCATATACTCTTGTAGATCTTTGTATGAATGGGCTTTTGTCTGATTTGCATGGTTGAAGACATTCGTGTGTGTGCACTCAGGTGAGTCCGTGGTCAATAAGTCATACACTCTTGTAGATCTTTGTATGAATGGGCTTTTGTCTGATTTGCATGGATGAAGACATTCGTGTGTGCACTCGAGTGAGTCCGTGGTCTTCGGCACTCGGTTGAGTTCGTGGTCTTCAGCAATCCTGGTGAGTTCGTGGTCTTCAGCAACTTTGGTGAGTCTGTGGTCTTCGACACTCGGTTGAGTCCATGGTCTTCGACACTCGGTTGAGTCCATGGTCTTCGACACTCGGTTGAGTTCGTGGTCTTCGGCACTCGATTGAGTGTCCGTGGTCTTCAGCACTCGATTGAGTCCGTGGTCTTCAGCACTCGATTGAGTCCGTGGTCTTCAGCACTCGATAATCAGTTATCTGAGCACTCGGAATAGGTGGAAATAAAATATTATTTAGAACAATGTAAACCCAATCCAAAAGTTTGGATTGATCTAAAAAAATTTCCATTCTAAACCAATCCAACTTAACCTATATTAGTTCGTAATTACTCTTGCAACCACGGCATAGATTTAATTCTAAATTTTAAAAAAATTTGGAATTTTTTTAATAGGTAAAAAATTGAGACTAAATTTTTAATTTCATAGCTTTATAATTAATCCGTTCTTTTTTTTACAAAATAAAATTCTTCATTTTAATAAAAAATATATTTCGAAAAAAATTTAAAGTTGGAAGTGTTGTGAATATAACCTCCCAAAAAAAAAAAAAAAAAGCCTCGAAAAGGATAAGATTAATTCAGCCGAGTACAGTAAGTGCTCATTTGAAGGAAGTCTGCGACGAAACGACACATCTTTGGTTATCTTACGGAGAGTACAACAACTCAGCTTCCCTCCATCCTTCAGTGGACCCATTTATAAAATACAACTAAAGGGCTACAGCATTTCTCATAATCGTGGTAATTACAGGTAATCTGCTTTCTTTTACTTTACAAATTTGTTCATTTCTCCCTTTGTTCTTTGAATCCTCGCTTTGCCCACAAGGTGTTTGATGAAATGCCAAACCCAAGTTTTAACGACTTCGTTGAGCATCCTGGTTGTATAAACAAACACTTCTGAACATTCCTTTCTCTAGTGCTTTTAATGGCTGCCCTTTGCTCTCTTGTTACAGGCTTGTTTGTGGCAGACATTTGACTGATACTTATAGACCCTTTACAAGTATGCTAAGTAGGGGAGGTTTAATCTCATCCTGTATTTCTTCTTCTTTGAAATGCTTCTCTTCTTCAACTTCTAATGTGCTCAAAGTTGGAGATATCTTGAGCCATACCAGAATCTTCACCAGTGAAGATGTTTTGGAATACTCCAAAGTGAGTCATGACTCAAATCCTCTGCATTTTGATTCTGCTTTAGCCCGACGTGCTGGATTCGACGATCGTCTTGTTCATGGGATGCTTGTTGCATCAATGTTCCCTCATGTCATTTCCTCTCATTTTGTAAGTCTAGATAGTCTGCATTTCTTACACACATAACTTTATGGGGACTGAAAAATGGCACTCACGCTTGTTTGAGATCTTTTAATGTATGTGGATGATTGTAGCCAGGAGCTATCTATGTGTCACAAAGCTTGAATTTTAAGTTACCAGTCTACGTCGGAGAGACGATCATTGTTCGGGTTGAAGCAATCGACTTGAGAGAAATTAAGAAGAGATACCTGTAATAAGCTTGTTCTTGGCAAATCTCTACCTTCTCATTCGAATTTCAAGTTATCATTTCATTGAGTTGGTGCTTGCTGAATGTGTTTCAGGGTGAAATTCCAAACGAAATGCTTGAGGAATGGCGACGAGCTTGTTCTGGATGGTGAGGCAAGGGCCATATTACCTTCCACAGATGGTTAGACGATGATCGTCTAAGTCTCAACCGCTTCCTTGTACTTGGATCGAAGGGCTAGATGTGGTTGAAGGAGCAAAGTTTTCCATTTGAATTCATTCAATTTCTTCCTTGCTCTCTGTGGATAAAGGATGTCAAGCCTGGGAATAGTCTGACCTCTATTTGCTTTTACTTCATCTCTTATTGATAGGTTATGAACAATATCTGGACCTGTTTCTTTCAATAAATTTGCCATGAGCCTTGTGATCTTGGAACTGTTCTATCAATAGAGACTAACAAAATGAACAAATTTTCTGTCATAATGAATTGAATTTTTATTGAATTATCTTGTGTTCAATGAGACATCCAAG AATTCGGAGGATCGAACCAAAGGAATAGGAAGAAGAACCCTAGAAAACTGAAAAGCAAGCGCACTGTTAACAGAAAATTACAGTAAAAAGTGGAGGCCGGAAAATTTCCGATGGCGCAAGATCGGAAGAGGCAGAGACCGAATATATTGATCACCGGAACTCCTGGAACCGGCAAGACAACAACGTCATCTGCTTTAGCAGACGCCGCTCAACTTCGTCATGTCTCCGTTGGGGACCTTGTGAAGGAGAAGAGTTTGCACGATGGCTGGGATGACGAACTCCAGTGCTATGTAATCAACGAAGATCTGGTCTGCGATGAGTTGGAGGATTTGATGGACGAAGGTGGAATCATTGTGGATTATCACGGTTGTGATTTTTTTCCTGAGCGGTGGTTTGATCGTGTGGTTGTTCTCCAGACCGAGAACTCGATCTTGTATGATCGCTTGACGAAGAGGGGATACGATGGAGCTAAGCTTTCAAACAATATTGAATGCGAAATCTTTCAGATATTGCTCGAGGAAGCGAAGGAAAACTATCAGGAGAACATAGTGGTGGATCTAAGGAGTGACACTGTTGAAGATGTAGCTAGAAACGTTGAAACTCTGTCGAACTGGGTTAAGAATTGGCAACCTGTGGAAGATCTAGCATGTCCATTGAAGATCGCTCAAGTCACATGGGAACAGGAAAATTGTCAAGCACTCAGCAAGCAAATATGGGCCTTTGAAGAAGGGCTTGTTTGTGGCAGACATTTGACTGATACTTATAGACCCTTTACAAGTATGCTAAGTAGGGGAGGTTTAATCTCATCCTGTATTTCTTCTTCTTTGAAATGCTTCTCTTCTTCAACTTCTAATGTGCTCAAAGTTGGAGATATCTTGAGCCATACCAGAATCTTCACCAGTGAAGATGTTTTGGAATACTCCAAAGTGAGTCATGACTCAAATCCTCTGCATTTTGATTCTGCTTTAGCCCGACGTGCTGGATTCGACGATCGTCTTGTTCATGGGATGCTTGTTGCATCAATGTTCCCTCATGTCATTTCCTCTCATTTTCCAGGAGCTATCTATGTGTCACAAAGCTTGAATTTTAAGTTACCAGTCTACGTCGGAGAGACGATCATTGTTCGGGTTGAAGCAATCGACTTGAGAGAAATTAAGAAGAGATACCTGGTGAAATTCCAAACGAAATGCTTGAGGAATGGCGACGAGCTTGTTCTGGATGGTGAGGCAAGGGCCATATTACCTTCCACAGATGGTTAGACGATGATCGTCTAAGTCTCAACCGCTTCCTTGTACTTGGATCGAAGGGCTAGATGTGGTTGAAGGAGCAAAGTTTTCCATTTGAATTCATTCAATTTCTTCCTTGCTCTCTGTGGATAAAGGATGTCAAGCCTGGGAATAGTCTGACCTCTATTTGCTTTTACTTCATCTCTTATTGATAGGTTATGAACAATATCTGGACCTGTTTCTTTCAATAAATTTGCCATGAGCCTTGTGATCTTGGAACTGTTCTATCAATAGAGACTAACAAAATGAACAAATTTTCTGTCATAATGAATTGAATTTTTATTGAATTATCTTGTGTTCAATGAGACATCCAAG ATGGCGCAAGATCGGAAGAGGCAGAGACCGAATATATTGATCACCGGAACTCCTGGAACCGGCAAGACAACAACGTCATCTGCTTTAGCAGACGCCGCTCAACTTCGTCATGTCTCCGTTGGGGACCTTGTGAAGGAGAAGAGTTTGCACGATGGCTGGGATGACGAACTCCAGTGCTATGTAATCAACGAAGATCTGGTCTGCGATGAGTTGGAGGATTTGATGGACGAAGGTGGAATCATTGTGGATTATCACGGTTGTGATTTTTTTCCTGAGCGGTGGTTTGATCGTGTGGTTGTTCTCCAGACCGAGAACTCGATCTTGTATGATCGCTTGACGAAGAGGGGATACGATGGAGCTAAGCTTTCAAACAATATTGAATGCGAAATCTTTCAGATATTGCTCGAGGAAGCGAAGGAAAACTATCAGGAGAACATAGTGGTGGATCTAAGGAGTGACACTGTTGAAGATGTAGCTAGAAACGTTGAAACTCTGTCGAACTGGGTTAAGAATTGGCAACCTGTGGAAGATCTAGCATGTCCATTGAAGATCGCTCAAGTCACATGGGAACAGGAAAATTGTCAAGCACTCAGCAAGCAAATATGGGCCTTTGAAGAAGGGCTTGTTTGTGGCAGACATTTGACTGATACTTATAGACCCTTTACAAGTATGCTAAGTAGGGGAGGTTTAATCTCATCCTGTATTTCTTCTTCTTTGAAATGCTTCTCTTCTTCAACTTCTAATGTGCTCAAAGTTGGAGATATCTTGAGCCATACCAGAATCTTCACCAGTGAAGATGTTTTGGAATACTCCAAAGTGAGTCATGACTCAAATCCTCTGCATTTTGATTCTGCTTTAGCCCGACGTGCTGGATTCGACGATCGTCTTGTTCATGGGATGCTTGTTGCATCAATGTTCCCTCATGTCATTTCCTCTCATTTTCCAGGAGCTATCTATGTGTCACAAAGCTTGAATTTTAAGTTACCAGTCTACGTCGGAGAGACGATCATTGTTCGGGTTGAAGCAATCGACTTGAGAGAAATTAAGAAGAGATACCTGGTGAAATTCCAAACGAAATGCTTGAGGAATGGCGACGAGCTTGTTCTGGATGGTGAGGCAAGGGCCATATTACCTTCCACAGATGGTTAG MAQDRKRQRPNILITGTPGTGKTTTSSALADAAQLRHVSVGDLVKEKSLHDGWDDELQCYVINEDLVCDELEDLMDEGGIIVDYHGCDFFPERWFDRVVVLQTENSILYDRLTKRGYDGAKLSNNIECEIFQILLEEAKENYQENIVVDLRSDTVEDVARNVETLSNWVKNWQPVEDLACPLKIAQVTWEQENCQALSKQIWAFEEGLVCGRHLTDTYRPFTSMLSRGGLISSCISSSLKCFSSSTSNVLKVGDILSHTRIFTSEDVLEYSKVSHDSNPLHFDSALARRAGFDDRLVHGMLVASMFPHVISSHFPGAIYVSQSLNFKLPVYVGETIIVRVEAIDLREIKKRYLVKFQTKCLRNGDELVLDGEARAILPSTDG Homology
BLAST of CmoCh20G005050 vs. ExPASy Swiss-Prot
Match: Q9FJI1 (Adenylate kinase isoenzyme 6 homolog OS=Arabidopsis thaliana OX=3702 GN=AAK6 PE=1 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 7.2e-68 Identity = 113/169 (66.86%), Postives = 146/169 (86.39%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy Swiss-Prot
Match: Q54Y03 (Adenylate kinase isoenzyme 6 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0278493 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.6e-54 Identity = 91/167 (54.49%), Postives = 128/167 (76.65%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy Swiss-Prot
Match: A5PJA1 (Adenylate kinase isoenzyme 6 OS=Bos taurus OX=9913 GN=AK6 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 6.8e-50 Identity = 91/163 (55.83%), Postives = 121/163 (74.23%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy Swiss-Prot
Match: Q9Y3D8 (Adenylate kinase isoenzyme 6 OS=Homo sapiens OX=9606 GN=AK6 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.4e-49 Identity = 87/163 (53.37%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy Swiss-Prot
Match: Q8VCP8 (Adenylate kinase isoenzyme 6 OS=Mus musculus OX=10090 GN=Ak6 PE=1 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 7.5e-49 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy TrEMBL
Match: A0A2H5NEH5 (Adenylate kinase isoenzyme 6 homolog OS=Citrus unshiu OX=55188 GN=CUMW_035560 PE=3 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 1.0e-133 Identity = 241/379 (63.59%), Postives = 296/379 (78.10%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy TrEMBL
Match: A0A078H253 (Adenylate kinase isoenzyme 6 homolog OS=Brassica napus OX=3708 GN=BnaA10g13190D PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 1.0e-117 Identity = 216/377 (57.29%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy TrEMBL
Match: A0A3P6DN85 (Adenylate kinase isoenzyme 6 homolog OS=Brassica oleracea OX=3712 GN=BOLC9T58170H PE=3 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.8e-117 Identity = 218/377 (57.82%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy TrEMBL
Match: A0A0D3ED35 (Adenylate kinase isoenzyme 6 homolog OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.8e-117 Identity = 218/377 (57.82%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. ExPASy TrEMBL
Match: A0A3P6D7P4 (Adenylate kinase isoenzyme 6 homolog OS=Brassica campestris OX=3711 GN=BRAA10T43836Z PE=3 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 8.7e-117 Identity = 216/377 (57.29%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. NCBI nr
Match: KAG6570765.1 (Adenylate kinase isoenzyme 6-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 669.1 bits (1725), Expect = 2.3e-188 Identity = 346/386 (89.64%), Postives = 349/386 (90.41%), Query Frame = 0
BLAST of CmoCh20G005050 vs. NCBI nr
Match: GAY38291.1 (hypothetical protein CUMW_035560 [Citrus unshiu]) HSP 1 Score: 486.5 bits (1251), Expect = 2.1e-133 Identity = 241/379 (63.59%), Postives = 296/379 (78.10%), Query Frame = 0
BLAST of CmoCh20G005050 vs. NCBI nr
Match: CAF2336112.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 433.3 bits (1113), Expect = 2.1e-117 Identity = 216/377 (57.29%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. NCBI nr
Match: CDY31552.1 (BnaA10g13190D [Brassica napus]) HSP 1 Score: 433.3 bits (1113), Expect = 2.1e-117 Identity = 216/377 (57.29%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. NCBI nr
Match: VDD32847.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 432.6 bits (1111), Expect = 3.6e-117 Identity = 218/377 (57.82%), Postives = 271/377 (71.88%), Query Frame = 0
BLAST of CmoCh20G005050 vs. TAIR 10
Match: AT5G60340.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 259.2 bits (661), Expect = 5.1e-69 Identity = 113/169 (66.86%), Postives = 146/169 (86.39%), Query Frame = 0
BLAST of CmoCh20G005050 vs. TAIR 10
Match: AT5G60335.1 (Thioesterase superfamily protein ) HSP 1 Score: 185.3 bits (469), Expect = 9.4e-47 Identity = 90/145 (62.07%), Postives = 119/145 (82.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|