CmoCh20G004850 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G004850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	glutamic acid-rich protein-like
Location	Cmo_Chr20: 2268874 .. 2271677 (-)
RNA-Seq Expression	CmoCh20G004850
Synteny	CmoCh20G004850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATCTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGTTGAAATCTTCGCGGTCTGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTTCCAGAGGTAATCCACATTGGATCGAAGACGACGAGAAGAAAAATCCTCTGTATCTAAGAGCAAAAGATGGAAGAAGCGGTAAGCCGAGTTTTAATGTTCAATCTGAGGATGGGAAGGATGGGAAGACGGAAAAGGAAAGCGGTGGGAGTGGTGATTTTGAGGATGCATCGGGTGAATACCGAAAGAGAAAGGTCGGGGACTTGAAAACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTGGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGAAAAAAGGAAAAAAGCACAAGAAAAAGAGCGAGGATAGACATGCTAAGATTGAAGATGACGAACGCGAGGATGGAGCCAGGCGAAGTTACAGTAAATCTCGAAATAGTGATAACAATGGCGAAATTGAAGCTTCTGGGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGAGGACAAGAAGAGTTTGGGTGACGATAAGGATCAAGTAAAGAGTGAAGGTCAGAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAACAAGGATAATGATGATGGAACAGAGTCGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGACGATTTTCAGAACAACAGTGGAGGAGCTATGGTGAAAGAGGAAATCCCAGTTTCGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGGTTTAGAAGAAGGGGGTGATGATGGGTCCGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGAGACAAGGAAGGATGAACTCACAGTTCTTGCTTCAGTTTACTAATTGCTATCAATGGTAATTGTTTGATGCTTTATTTCATCCTTCTATTTTGATTCTTTATACCAAAAGTATTATCAATCGCTTAGGAAGCTAATTTTGTGTTCATTCTTGTGAAATTTTGACATTAGAACCCTTCCCCTGACCCCTTCTGGTCAATGATTTATTTGTTTGAATTTGTAGCCTGTTGATCTCTGATGTTTATAGGGAAGAAGAACTGGGTGAAAGGCAACTTTTTGCAAAGAACATATAGAAGGTACATTATTTGATGCTTATTTATACAATTTGATCAAGAGATTGATCAGTCTGCATTGGCCAAAAGGTTTTGTGCTTGTATCTCATTGTGAAATTTGTTCTTCTTTGAGTCATCTGCTGACCAAACAAATATGCCATGAAGTTTGCCCCTACTTTGAAGGGTTCTGCATGCCTTGAAGAACCCTTTTTCTGGTGTCAAACCTCCACTTCCATCTGTTGCAAAGCTTGCTAGAACTTTACCACCTTGATAATTTGAGGTTTGGGTCTCAAAATGATTCAAAAACTGAGAAACTGTGGTCCCTTTTCCATAGGCATAGAACTGGAAGTTCACATAGTCTATTAGATCTCCATACTTCCTCCACAAAGCTAAGTAATGTGTTTGGACAGCGTCGTCGTCGAACGGTGCAATGGATGCAAATGAAATAACATTTTGACGTTTGAGACGGAGCAGGAGTTTCCCTATGCACTCGGTGAATACATCGGGGTGTGCTTTGAAGTGTTCGTAATCGATATCGACCCCATCTATATCATACTCCTTCACTATACGAGATATGGACTCGAAAGCATTTTTAACCCAAGATGTAATGGATTTAGGTTTGAAGTATGCAAATTGTTTGCCTGCCGTATCGCCCCCGAGGCTGAGGGCGAACTTGACGTTTGAATGCTGGGCCTTGATGGAAGAAACAGAAGAAGGCGATAGGATTTGTTCATCCCAAAAGACTCTGAATTTGCCATTTGTTGCAGAAGGAGAAGATGAAGCCGTGTAATCGATGGCGAAGGAGAGGATGAAGTGGAACTCGACATCGGGATGAATAGGTACGTCTGAAAATCTTACATTATTGCCATCAGCTCCTATGTATTCTCTGAATAGTCTTGTGTTATCTAGGGGGGTTGCCTCTAGTGATGGAAGAGTGGGGAATAGCAACGGTAGAAATGAAAATAAGAAGAATATCTGAGCTGAACCCATAATAATTGGTTGAAGCTTGATGACACTTCTTCTCTTTATAAAGCCCTGTGAGATCACACGTTAGTCAGGTAGGGAAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTACCTAGCAACGCATGTTAAAAACCTTGAGAGGAAGCCCAAAGAAGACAATATCTGTTAGTGATGCTAGCGATGGGCTTGAGCTGTTACATTTAAACTCTGATGTAGAAATGGAGAAACATGAGATCCTCGTTGGCAATGGACGGCTACTAGGCAACTAATTTGTCAGTTATGAATTATTTGAGATATATTAGAACCTTGTTTTATCTCAAGAACTTTTGTTATTAGTTTGTAGAAAACAAAGGTTTCTAGGTTTTAACCATCATTCGATAACTTGAAGAAAACATTTCTTGACCGTTGGATGATGATATGTAGTTCTTTGGAATTCATGTATTTTGTTTGTTCTTTTGGTATTAGTCTGCAAATGTGTCATAG

mRNA sequence

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATCTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGTTGAAATCTTCGCGGTCTGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTTCCAGAGGTAATCCACATTGGATCGAAGACGACGAGAAGAAAAATCCTCTGTATCTAAGAGCAAAAGATGGAAGAAGCGGTAAGCCGAGTTTTAATGTTCAATCTGAGGATGGGAAGGATGGGAAGACGGAAAAGGAAAGCGGTGGGAGTGGTGATTTTGAGGATGCATCGGGTGAATACCGAAAGAGAAAGGTCGGGGACTTGAAAACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTGGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGAAAAAAGGAAAAAAGCACAAGAAAAAGAGCGAGGATAGACATGCTAAGATTGAAGATGACGAACGCGAGGATGGAGCCAGGCGAAGTTACAGTAAATCTCGAAATAGTGATAACAATGGCGAAATTGAAGCTTCTGGGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGAGGACAAGAAGAGTTTGGGTGACGATAAGGATCAAGTAAAGAGTGAAGGTCAGAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAACAAGGATAATGATGATGGAACAGAGTCGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGACGATTTTCAGAACAACAGTGGAGGAGCTATGGTGAAAGAGGAAATCCCAGTTTCGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGGTTTAGAAGAAGGGGGTGATGATGGGTCCGAGGAACAACAGCGGGGGTTGCCTCTAGTGATGGAAGAGTGGGGAATAGCAACGTCTGCAAATGTGTCATAG

Coding sequence (CDS)

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATCTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGTTGAAATCTTCGCGGTCTGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTTCCAGAGGTAATCCACATTGGATCGAAGACGACGAGAAGAAAAATCCTCTGTATCTAAGAGCAAAAGATGGAAGAAGCGGTAAGCCGAGTTTTAATGTTCAATCTGAGGATGGGAAGGATGGGAAGACGGAAAAGGAAAGCGGTGGGAGTGGTGATTTTGAGGATGCATCGGGTGAATACCGAAAGAGAAAGGTCGGGGACTTGAAAACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTGGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGAAAAAAGGAAAAAAGCACAAGAAAAAGAGCGAGGATAGACATGCTAAGATTGAAGATGACGAACGCGAGGATGGAGCCAGGCGAAGTTACAGTAAATCTCGAAATAGTGATAACAATGGCGAAATTGAAGCTTCTGGGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGAGGACAAGAAGAGTTTGGGTGACGATAAGGATCAAGTAAAGAGTGAAGGTCAGAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAACAAGGATAATGATGATGGAACAGAGTCGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGACGATTTTCAGAACAACAGTGGAGGAGCTATGGTGAAAGAGGAAATCCCAGTTTCGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGGTTTAGAAGAAGGGGGTGATGATGGGTCCGAGGAACAACAGCGGGGGTTGCCTCTAGTGATGGAAGAGTGGGGAATAGCAACGTCTGCAAATGTGTCATAG

Protein sequence

MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKSSRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKDGKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQRGLPLVMEEWGIATSANVS

Homology

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BLAST of CmoCh20G004850 vs. ExPASy TrEMBL
Match: A0A6J1FSX8 (glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.0e-172
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE
Sbjct: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300
           DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300

Query: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 346
           NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR
Sbjct: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 345

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BLAST of CmoCh20G004850 vs. ExPASy TrEMBL
Match: A0A6J1JCJ7 (cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.6e-152
Identity = 319/346 (92.20%), Postives = 327/346 (94.51%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEA+R NP WIED EKKNPLYLRAKDG+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK EKESGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKH+KKSEDR+AKIEDDE + GARRS SKSRNSDNNGEIEAS KFVENNIASGKDRKKH 
Sbjct: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTEST-KKKKKKKKKKNREEEDDDFQ 300
           DKKSLGDDKDQVKSEG RRRDAEEEKSTNKDNDDGTES+ KKKKKKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 346
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDGSEEQQR
Sbjct: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQR 343

[Close]

BLAST of CmoCh20G004850 vs. ExPASy TrEMBL
Match: A0A5A7SW64 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00720 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 3.6e-96
Identity = 239/351 (68.09%), Postives = 269/351 (76.64%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAK---DGR---SGKPSFNVQ 120
           S S RKH HHGS+ SN+ EA+  N + +ED +KKN      K   D +   + K S  VQ
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEYRVEDGDKKNSSVSEKKKRPDSKYRTTDKTSLRVQ 120

Query: 121 SEDGKDGKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVV 180
           S+D + GKT  E+GG+G+ ED SG   KRK G LK EIEDKP+ KVEMDVESSD    VV
Sbjct: 121 SDDEQSGKTAMENGGNGNLEDVSG---KRKGGGLKIEIEDKPSGKVEMDVESSD----VV 180

Query: 181 AVEKKGKKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNN-GEIEASGKFVENNIASG 240
           AVEKK KKHKKKSEDRH  IEDDERE GAR  + KS+N+DNN    EASG+FVENN+A G
Sbjct: 181 AVEKKRKKHKKKSEDRHGDIEDDERESGARLKHGKSQNTDNNCDNAEASGEFVENNVAKG 240

Query: 241 KDRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREE 300
           K RKK EDK+SLGD KDQVKSE QRR D +EE+ST+ DN +GT+      KKKKK+ + E
Sbjct: 241 KSRKKLEDKRSLGDVKDQVKSEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQRE 300

Query: 301 EDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGL-EEGGDDGSEEQ 344
           EDDDFQ NSGGAMVKEE+PV D KELKRKEKKK KNR L EEG DDGSEEQ
Sbjct: 301 EDDDFQKNSGGAMVKEEVPVLDSKELKRKEKKKSKNRELGEEGHDDGSEEQ 344

[Close]

BLAST of CmoCh20G004850 vs. ExPASy TrEMBL
Match: A0A0A0KCS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 8.0e-96
Identity = 237/350 (67.71%), Postives = 269/350 (76.86%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTV GS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELKQLHKELKS
Sbjct: 1   MKTVNGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLR------AKDGRSGKPSFNVQ 120
           S S RKH HHGSE SN+ EA+  + + +ED +K N            KD  + K S  VQ
Sbjct: 61  SCSVRKHLHHGSEVSNEFEAAIHDQYRVEDGDKNNSSVSEKKKRPDRKDRTTDKTSLRVQ 120

Query: 121 SEDGKDGKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVV 180
           S + + GKT  E+GG+G+ ED +G   K+K  +LK EIEDKP+ KVEMDVESSD+DKSVV
Sbjct: 121 SYNEQIGKTPMENGGNGNLEDVTG---KKKGSELKIEIEDKPSGKVEMDVESSDRDKSVV 180

Query: 181 AVEKKGKKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGK 240
           AVEKK K+HKKKSEDRH  IEDDERE GAR  + KS+N+DNN + EASG+FVENN+A+GK
Sbjct: 181 AVEKKRKRHKKKSEDRHDDIEDDERESGARLKHGKSQNTDNNCDAEASGEFVENNVANGK 240

Query: 241 DRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEE 300
            RKK EDKK L D KDQVKSE QRR D +E KSTN DND+GT+      KKKKK+ R EE
Sbjct: 241 SRKKLEDKKRLDDVKDQVKSEDQRRGDVKEGKSTNNDNDNGTDHVDLSPKKKKKR-RREE 300

Query: 301 DDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGL-EEGGDDGSEEQ 344
           DDDFQ NSG AMVKEE+PV D KELKRKEKKK KNR L EEG DDGSEEQ
Sbjct: 301 DDDFQKNSGEAMVKEEVPVLDSKELKRKEKKKSKNRELGEEGRDDGSEEQ 346

[Close]

BLAST of CmoCh20G004850 vs. ExPASy TrEMBL
Match: A0A5D3CVE3 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00960 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 3.1e-95
Identity = 238/351 (67.81%), Postives = 268/351 (76.35%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAK---DGR---SGKPSFNVQ 120
           S S RKH HHGS+ SN+ EA+  N + +ED +KKN      K   D +   + K S  VQ
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEYRVEDGDKKNSSVSEKKKRPDSKYRTTDKTSLRVQ 120

Query: 121 SEDGKDGKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVV 180
           S+D + GKT  E+GG+G+ ED SG   KRK G LK EIEDKP+ KVEMDVESSD    VV
Sbjct: 121 SDDEQSGKTAMENGGNGNLEDVSG---KRKGGGLKIEIEDKPSGKVEMDVESSD----VV 180

Query: 181 AVEKKGKKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNN-GEIEASGKFVENNIASG 240
           AVEKK KKHKKKSEDRH  IEDDERE GAR  + KS+N+DNN    EASG+FVENN+A G
Sbjct: 181 AVEKKRKKHKKKSEDRHGDIEDDERESGARLKHGKSQNTDNNCDNAEASGEFVENNVAKG 240

Query: 241 KDRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREE 300
           K RKK EDK+SLGD KDQVKSE QRR D +EE+ST+ DN +GT+      KKKKK+ + E
Sbjct: 241 KSRKKLEDKRSLGDVKDQVKSEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQRE 300

Query: 301 EDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGL-EEGGDDGSEEQ 344
           EDDDFQ NSG AMVKEE+PV D KELKRKEKKK KNR L EEG DDGSEEQ
Sbjct: 301 EDDDFQKNSGEAMVKEEVPVLDSKELKRKEKKKSKNRELGEEGHDDGSEEQ 344

[Close]

BLAST of CmoCh20G004850 vs. NCBI nr
Match: XP_022943393.1 (glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943394.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943395.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943397.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943398.1 glutamic acid-rich protein-like [Cucurbita moschata])

HSP 1 Score: 614.0 bits (1582), Expect = 8.3e-172
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE
Sbjct: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300
           DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300

Query: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 346
           NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR
Sbjct: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 345

[Close]

BLAST of CmoCh20G004850 vs. NCBI nr
Match: KAG7010591.1 (hypothetical protein SDJN02_27385, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 584.7 bits (1506), Expect = 5.4e-163
Identity = 334/345 (96.81%), Postives = 336/345 (97.39%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEASR NPHWIED EKKNPLYLRAK GRSGKPSFNVQSEDGKD
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKD 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GKTEKESGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDVESSDKDKSVVAVE K 
Sbjct: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVETKR 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKHKKKSEDRHAKIEDDERE+GARRSYSKSR SDNNGEIEASGKFVENNIASGKDRKKHE
Sbjct: 181 KKHKKKSEDRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300
           DKKSL DDKDQVKSEGQRRRDAEEEKSTNKDNDDG ESTKKKKKKKKKKNREEEDDDFQN
Sbjct: 241 DKKSLVDDKDQVKSEGQRRRDAEEEKSTNKDNDDGAESTKKKKKKKKKKNREEEDDDFQN 300

Query: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 346
           NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR
Sbjct: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 345

[Close]

BLAST of CmoCh20G004850 vs. NCBI nr
Match: KAG6570745.1 (hypothetical protein SDJN03_29660, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 581.6 bits (1498), Expect = 4.6e-162
Identity = 330/339 (97.35%), Postives = 333/339 (98.23%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEASR NPHWIED EKKNPLYLRAKDGRSGKPSFNVQSEDGKD
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GKTEKESGG+GDFEDASGEYRKRKV DLKTEIE+KPNRKVEMDVESSDKDKSVVAVE K 
Sbjct: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIENKPNRKVEMDVESSDKDKSVVAVETKR 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKHKKKSEDRHAKIEDDERE+GARRSYSKSR SDNNGEIEASGKFVENNIASGKDRKKHE
Sbjct: 181 KKHKKKSEDRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300
           DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300

Query: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDG 340
           NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDG
Sbjct: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDG 339

[Close]

BLAST of CmoCh20G004850 vs. NCBI nr
Match: XP_023511985.1 (DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511987.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511988.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577.4 bits (1487), Expect = 8.6e-161
Identity = 329/345 (95.36%), Postives = 334/345 (96.81%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEA R NPHWIED EKKN  YLR KDGRSGKPS NVQSEDG+D
Sbjct: 61  SRSDRKHRHHGSEASNDPEAPRVNPHWIEDGEKKNLEYLREKDGRSGKPSLNVQSEDGQD 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GKTE +SGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKTETKSGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKHKKKSEDRHAKIEDDE E GARRSYSKSRNSDNNGEIEASGKFVEN+IASGKDRKKHE
Sbjct: 181 KKHKKKSEDRHAKIEDDEHEAGARRSYSKSRNSDNNGEIEASGKFVENSIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKKKKKKKKNREEEDDDFQN 300
           DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKK+KKKKKKNREEEDDDFQN
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTESTKKKRKKKKKKNREEEDDDFQN 300

Query: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 346
           NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR
Sbjct: 301 NSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 345

[Close]

BLAST of CmoCh20G004850 vs. NCBI nr
Match: XP_022986894.1 (cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxima] >XP_022986896.1 cylicin-1-like [Cucurbita maxima])

HSP 1 Score: 547.7 bits (1410), Expect = 7.3e-152
Identity = 319/346 (92.20%), Postives = 327/346 (94.51%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120
           SRSDRKHRHHGSEASNDPEA+R NP WIED EKKNPLYLRAKDG+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120

Query: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK EKESGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240
           KKH+KKSEDR+AKIEDDE + GARRS SKSRNSDNNGEIEAS KFVENNIASGKDRKKH 
Sbjct: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240

Query: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTEST-KKKKKKKKKKNREEEDDDFQ 300
           DKKSLGDDKDQVKSEG RRRDAEEEKSTNKDNDDGTES+ KKKKKKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQR 346
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDGSEEQQR
Sbjct: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQR 343

[Close]

BLAST of CmoCh20G004850 vs. TAIR 10
Match: AT5G60030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-13
Identity = 98/314 (31.21%), Postives = 161/314 (51.27%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTG +VS++PIS+SKAA  LS F S DNGAS+ + AYLRRASA+F ELK  H+E+KS
Sbjct: 1   MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKS 60

Query: 61  SR----SDRKHRHHGSEASNDPEASR-------GNPHWIEDDE--KKNPLYLRAKDGRSG 120
                 SDR+ +   ++ S+D ++ R       G      + E      +Y R +D +  
Sbjct: 61  KETKPSSDRETKSTETKQSSDAKSERNVIDEFDGRKIRYRNSEAVSVESVYGRERDEKKM 120

Query: 121 KPSFNVQSEDGKDGKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESS 180
           K S +    D K  +  +    S +  +   E +K+K    +  +++K   K+E      
Sbjct: 121 KKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLE------ 180

Query: 181 DKDKSVVAVEKKGKKHKKKSE----DRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASG 240
           D+ KS    E+K KK KK ++    D   K+ED+++                + EI+   
Sbjct: 181 DEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQK----------------SAEIKEKK 240

Query: 241 KFVENNIASGKDRKKHEDKKSLGDDKDQVKSEGQRRRD--AEEEKSTNKDNDDGTESTKK 296
           K  + ++   K+++K ED++  G+ K + K + +   +  +EE KS  K   D    +++
Sbjct: 241 KNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSEE 292

[Close]

BLAST of CmoCh20G004850 vs. TAIR 10
Match: AT1G75335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-12
Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELK- 60
          MKTVTG + S+KPIS+SKAA+ LS F+S +NGAS+ + AYLRRAS +F ELK +H+E+K 
Sbjct: 1  MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREIKS 60

Query: 61 -----SSRSDRK-HRHHGSEASNDPEASR 83
               SS+  RK HR  GSE     +  R
Sbjct: 61 KETKLSSKKKRKSHREMGSEERKKSKKKR 89

The following BLAST results are available for this feature:

BLAST of CmoCh20G004850 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G004850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSX8	4.0e-172	100.00	glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE...	[more]
A0A6J1JCJ7	3.6e-152	92.20	cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1	[more]
A0A5A7SW64	3.6e-96	68.09	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KCS1	8.0e-96	67.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1	[more]
A0A5D3CVE3	3.1e-95	67.81	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of CmoCh20G004850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943393.1	8.3e-172	100.00	glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943394.1 glutamic ac...	[more]
KAG7010591.1	5.4e-163	96.81	hypothetical protein SDJN02_27385, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570745.1	4.6e-162	97.35	hypothetical protein SDJN03_29660, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023511985.1	8.6e-161	95.36	DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topois...	[more]
XP_022986894.1	7.3e-152	92.20	cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxi...	[more]

BLAST of CmoCh20G004850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60030.1	1.3e-13	31.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75335.1	1.4e-12	52.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..363
None	No IPR available	PANTHER	PTHR48227	DNA TOPOISOMERASE 1-LIKE	coord: 1..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G004850.1	CmoCh20G004850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane