CmoCh20G004180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G004180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor PCL1
Location	Cmo_Chr20: 1984641 .. 1985507 (-)
RNA-Seq Expression	CmoCh20G004180
Synteny	CmoCh20G004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAAGAGAGAGTGCCGATTTGGTGATGGTAATGGTTGTATAAATGGCGATGAAAGAGTTTTTCAGTGGGAGGATGGCCTCCCCGACGCAGAAAAATTAACGCCTCTTTCTCAATCGCTGGTATCGCAGGAACTGGCTTCGGCGTTCAGGATTTTGATGGAACCTCATCGGAGTATATCTGATGTTAAGTCGGCGTCGAAGACGACGATATTGAATATTTGCGACGGACAATCGGAAGGATACAGAGGTTTCGAGCTTAATTACGATCAGACGCGGGGGGAAGACGCCGCGATGATTGAATCGGACGAGGTGATAAATCTAGATGAGTTGAGATCCGATTCGCGGAAATTGAGGAGGATTGATTGTTTTAAAGAGGCAAATTCTGCGCCTCGGGGGGAGAGCTCGATCGAGGATGCGGCATTGGCTCGAACCTTGAAGCGGCCGAGGGTTGCATGGACTCCGCAATTGCACAAACGGTTCGTGGACGTGGTTTCTCATCTAGGGCTCAAAGAAGCAGCTCCCAAAGCCATTATGCGATTGATGAATGTCGAGGGATTGACTCGCGAGAACGTTGCCAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACACAACCATCCTCAACGACTGACGAGGCGACACAGAACTCACATGATTCTGCTCCCAGTGCCGATTCACAAGGAAACGGCTATTTTCCATCTACTTTTCCGATGACTTATGCGCCATCTCCGATGATGCCTATGATGTTATATAGTATGGGAGCTCACGGCCACGGTCTTAGTCATACAGGCATGCTGATGGTTAACCTGAGCACTGTACCGACCCACTCGTGTAGCACGAAAGGGCAGCATAATTGA

mRNA sequence

ATGGAGAAGAAGAGAGAGTGCCGATTTGGTGATGGTAATGGTTGTATAAATGGCGATGAAAGAGTTTTTCAGTGGGAGGATGGCCTCCCCGACGCAGAAAAATTAACGCCTCTTTCTCAATCGCTGGTATCGCAGGAACTGGCTTCGGCGTTCAGGATTTTGATGGAACCTCATCGGAGTATATCTGATGTTAAGTCGGCGTCGAAGACGACGATATTGAATATTTGCGACGGACAATCGGAAGGATACAGAGGTTTCGAGCTTAATTACGATCAGACGCGGGGGGAAGACGCCGCGATGATTGAATCGGACGAGGTGATAAATCTAGATGAGTTGAGATCCGATTCGCGGAAATTGAGGAGGATTGATTGTTTTAAAGAGGCAAATTCTGCGCCTCGGGGGGAGAGCTCGATCGAGGATGCGGCATTGGCTCGAACCTTGAAGCGGCCGAGGGTTGCATGGACTCCGCAATTGCACAAACGGTTCGTGGACGTGGTTTCTCATCTAGGGCTCAAAGAAGCAGCTCCCAAAGCCATTATGCGATTGATGAATGTCGAGGGATTGACTCGCGAGAACGTTGCCAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACACAACCATCCTCAACGACTGACGAGGCGACACAGAACTCACATGATTCTGCTCCCAGTGCCGATTCACAAGGAAACGGCTATTTTCCATCTACTTTTCCGATGACTTATGCGCCATCTCCGATGATGCCTATGATGTTATATAGTATGGGAGCTCACGGCCACGGTCTTAGTCATACAGGCATGCTGATGGTTAACCTGAGCACTGTACCGACCCACTCGTGTAGCACGAAAGGGCAGCATAATTGA

Coding sequence (CDS)

ATGGAGAAGAAGAGAGAGTGCCGATTTGGTGATGGTAATGGTTGTATAAATGGCGATGAAAGAGTTTTTCAGTGGGAGGATGGCCTCCCCGACGCAGAAAAATTAACGCCTCTTTCTCAATCGCTGGTATCGCAGGAACTGGCTTCGGCGTTCAGGATTTTGATGGAACCTCATCGGAGTATATCTGATGTTAAGTCGGCGTCGAAGACGACGATATTGAATATTTGCGACGGACAATCGGAAGGATACAGAGGTTTCGAGCTTAATTACGATCAGACGCGGGGGGAAGACGCCGCGATGATTGAATCGGACGAGGTGATAAATCTAGATGAGTTGAGATCCGATTCGCGGAAATTGAGGAGGATTGATTGTTTTAAAGAGGCAAATTCTGCGCCTCGGGGGGAGAGCTCGATCGAGGATGCGGCATTGGCTCGAACCTTGAAGCGGCCGAGGGTTGCATGGACTCCGCAATTGCACAAACGGTTCGTGGACGTGGTTTCTCATCTAGGGCTCAAAGAAGCAGCTCCCAAAGCCATTATGCGATTGATGAATGTCGAGGGATTGACTCGCGAGAACGTTGCCAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACACAACCATCCTCAACGACTGACGAGGCGACACAGAACTCACATGATTCTGCTCCCAGTGCCGATTCACAAGGAAACGGCTATTTTCCATCTACTTTTCCGATGACTTATGCGCCATCTCCGATGATGCCTATGATGTTATATAGTATGGGAGCTCACGGCCACGGTCTTAGTCATACAGGCATGCTGATGGTTAACCTGAGCACTGTACCGACCCACTCGTGTAGCACGAAAGGGCAGCATAATTGA

Protein sequence

MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN

Homology

[Close]

BLAST of CmoCh20G004180 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.3e-39
Identity = 116/270 (42.96%), Postives = 147/270 (54.44%), Query Frame = 0


Query: 16  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILN 75
           ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ +
Sbjct: 12  VSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSS 71

Query: 76  ICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKE------- 135
           +  G S        N           +E ++ +      SDS+K +  +   +       
Sbjct: 72  LRGGSSGPNTSSSNN----------NVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP 131

Query: 136 --ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNV 195
             A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNV
Sbjct: 132 DSAMAAEEGDSGTEDLS-GKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 191

Query: 196 EGLTRENVASHLQKYRLYLKRTQ------PS------STTDEATQNSHDSAPSADSQGNG 255
           EGLTRENVASHLQKYRLYLKR Q      PS      S+T    Q+  D      S GN 
Sbjct: 192 EGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQSFQDIGGGGGSSGNV 251

Query: 256 YFPSTFPMTYAPSPMMPMMLYS--MGAHGH 262
             P   P  Y    MM M +Y+  MG  G+
Sbjct: 252 GVP--IPGAYGTQQMMQMPVYAHHMGMQGY 268

[Close]

BLAST of CmoCh20G004180 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38
Identity = 105/220 (47.73%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 11  DGNGCINGDE-RVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASK 70
           DG     GDE R+ +WE GLP+ + LTPLSQ LV   LA AF ++ E  R+I DV  AS+
Sbjct: 14  DGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQ 73

Query: 71  TTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELR---SDSRKLRRID--- 130
            T+ ++                  R    A    +EV++  E     SD +K ++ D   
Sbjct: 74  ITLSSL------------------RSSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGE 133

Query: 131 -CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRL 190
               E ++A  G+S  EDA+  +T KRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+L
Sbjct: 134 AAAVEDSTAEEGDSGPEDAS-GKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQL 193

Query: 191 MNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHD 223
           MNVEGLTRENVASHLQKYRLYLKR Q   TT+E   +S D
Sbjct: 194 MNVEGLTRENVASHLQKYRLYLKRIQ-GLTTEEDPYSSSD 213

[Close]

BLAST of CmoCh20G004180 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.3e-34
Identity = 100/237 (42.19%), Postives = 122/237 (51.48%), Query Frame = 0


Query: 2   EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSI 61
           E   E   G G      DERV +WE GLP A++LTPLSQ LV   LA+AFRI  EP R++
Sbjct: 4   EAPEEYELGGGE-----DERVMEWETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTL 63

Query: 62  SDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRR 121
            DV  AS  T+  +    S     F     +  G  A   ES                  
Sbjct: 64  LDVHRASAATVSRLRRASSSSSSSFPAFASKGAGTGADEAES------------------ 123

Query: 122 IDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMR 181
                    A  G  +  ++    + KR R+ WTPQLHKRFV+VV+HLG+K A PK IM+
Sbjct: 124 ------GGGADGGNGNTNNS----SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQ 183

Query: 182 LMNVEGLTRENVASHLQKYRLYLKRTQ--------PS----STTDEATQNSHDSAPS 227
           LMNVEGLTRENVASHLQKYRLY+KR Q        PS    ++T     + HD  PS
Sbjct: 184 LMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSPSDHIFASTPVPHASLHDQVPS 207

[Close]

BLAST of CmoCh20G004180 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.1e-27
Identity = 94/247 (38.06%), Postives = 122/247 (49.39%), Query Frame = 0


Query: 24  QWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGY 83
           +WE+ LP  E+L P+SQ+L++  LA AF+I    H        + +TT +       +  
Sbjct: 11  RWEEELPSPEELIPISQTLITPHLALAFQIGSPNHH-----LGSKRTTAI-----YHQKL 70

Query: 84  RGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAAL 143
           +        T      M+ SD                    F   +S   G  SI     
Sbjct: 71  QSSTTPTTPTPTPPPMMMNSD--------------------FGGGDSTDLGSGSI-GGEP 130

Query: 144 ARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLY 203
           ARTLKRPR+ WTPQLHKRFVD V HLG+K A PK IM+LM+VEGLTRENVASHLQKYRLY
Sbjct: 131 ARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLY 190

Query: 204 LKRTQPSS----------TTDEATQNSHDSAPSADSQGNGYFPSTFPMTYAPSPMMPMML 260
           L+R Q  +           +D AT     S+P          P+ F    +P  +MP + 
Sbjct: 191 LRRMQGGNGNGITGGHVIVSDSATDRLFASSP---------VPAHF---LSPDYLMPPLE 214

[Close]

BLAST of CmoCh20G004180 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.3e-18
Identity = 63/160 (39.38%), Postives = 89/160 (55.62%), Query Frame = 0


Query: 79  QSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSI 138
           Q + +RG       + GEDA    S  V   +  RS SRK       K+     +G+   
Sbjct: 176 QQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKR------KDEEGEEQGDDKD 235

Query: 139 EDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQ 198
           EDA+    LK+PRV W+ +LH++FV  V+ LG+++A PK I+ LMNV GLTRENVASHLQ
Sbjct: 236 EDAS---NLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQ 295

Query: 199 KYRLYLKR----TQPSSTTDEATQNSHDSAPSADSQGNGY 235
           KYR+YL+R    +Q     + +     D++    S  NG+
Sbjct: 296 KYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGF 326

[Close]

BLAST of CmoCh20G004180 vs. ExPASy TrEMBL
Match: A0A6J1FX19 (transcription factor LUX-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449034 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 3.7e-160
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60
           MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS
Sbjct: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60

Query: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120
           ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR
Sbjct: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120

Query: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180
           RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM
Sbjct: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180

Query: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240
           RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP
Sbjct: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240

Query: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
Sbjct: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 288

[Close]

BLAST of CmoCh20G004180 vs. ExPASy TrEMBL
Match: A0A6J1FYS4 (transcription factor LUX-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449034 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 9.4e-132
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 46  ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE 105
           ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE
Sbjct: 2   ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE 61

Query: 106 VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDV 165
           VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDV
Sbjct: 62  VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDV 121

Query: 166 VSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAP 225
           VSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAP
Sbjct: 122 VSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAP 181

Query: 226 SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKG 285
           SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKG
Sbjct: 182 SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKG 241

Query: 286 QHN 289
           QHN
Sbjct: 242 QHN 244

[Close]

BLAST of CmoCh20G004180 vs. ExPASy TrEMBL
Match: A0A0A0KH89 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G190220 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.2e-124
Identity = 234/294 (79.59%), Postives = 252/294 (85.71%), Query Frame = 0


Query: 2   EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSI 61
           +KKRE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI
Sbjct: 3   KKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSI 62

Query: 62  SDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRR 121
            DV SASK TILNI DGQSEGYR FE  YDQTR ED  M+ESDE IN D+L SDSRKLRR
Sbjct: 63  LDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRR 122

Query: 122 IDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMR 181
           +DC +E N APR ES IEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM+
Sbjct: 123 VDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ 182

Query: 182 LMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEA------TQNSHDSAP-SADSQGNGY 241
           +MNVEGLTRENVASHLQKYRLYLKRTQ SSTTDEA      TQN+HDS+P +ADS GN Y
Sbjct: 183 MMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGNDY 242

Query: 242 FPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           FP+TFP+TY PSPMMPMM Y MGAHGHGLS T M MVNL+ VPTHSCSTKGQH+
Sbjct: 243 FPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHD 296

[Close]

BLAST of CmoCh20G004180 vs. ExPASy TrEMBL
Match: A0A5D3CU36 (Transcription factor PCL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00200 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 8.0e-123
Identity = 233/294 (79.25%), Postives = 250/294 (85.03%), Query Frame = 0


Query: 2   EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSI 61
           +KKRE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI
Sbjct: 3   KKKREFQFGGGNGCGNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSI 62

Query: 62  SDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRR 121
            DV SASK TI+NI DGQSEGYR FE  YDQTR ED  M+ESDE IN D+L SDSRKLRR
Sbjct: 63  LDVNSASKMTIMNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRR 122

Query: 122 IDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMR 181
           +DC +E N APR ES IEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM+
Sbjct: 123 VDCVEETNIAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ 182

Query: 182 LMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEA------TQNSHDSAPS-ADSQGNGY 241
           +MNVEGLTRENVASHLQKYRLYLKRTQ SSTTDEA      TQN+HDS+PS ADS GN  
Sbjct: 183 MMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPSAADSHGNDC 242

Query: 242 FPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           FP+TFPMTY P PMMPMM Y MGAHGHGLS T M MVNL+ VPTHSCSTKGQH+
Sbjct: 243 FPATFPMTYMPFPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHD 296

[Close]

BLAST of CmoCh20G004180 vs. ExPASy TrEMBL
Match: A0A1S3CKP6 (transcription factor PCL1 OS=Cucumis melo OX=3656 GN=LOC103502064 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 8.0e-123
Identity = 233/294 (79.25%), Postives = 250/294 (85.03%), Query Frame = 0


Query: 2   EKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSI 61
           +KKRE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI
Sbjct: 3   KKKREFQFGGGNGCGNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSI 62

Query: 62  SDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRR 121
            DV SASK TI+NI DGQSEGYR FE  YDQTR ED  M+ESDE IN D+L SDSRKLRR
Sbjct: 63  LDVNSASKMTIMNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRR 122

Query: 122 IDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMR 181
           +DC +E N APR ES IEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM+
Sbjct: 123 VDCVEETNIAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ 182

Query: 182 LMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEA------TQNSHDSAPS-ADSQGNGY 241
           +MNVEGLTRENVASHLQKYRLYLKRTQ SSTTDEA      TQN+HDS+PS ADS GN  
Sbjct: 183 MMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPSAADSHGNDC 242

Query: 242 FPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           FP+TFPMTY P PMMPMM Y MGAHGHGLS T M MVNL+ VPTHSCSTKGQH+
Sbjct: 243 FPATFPMTYMPFPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHD 296

[Close]

BLAST of CmoCh20G004180 vs. NCBI nr
Match: XP_022944629.1 (transcription factor LUX-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 573.9 bits (1478), Expect = 7.6e-160
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60
           MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS
Sbjct: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60

Query: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120
           ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR
Sbjct: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120

Query: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180
           RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM
Sbjct: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180

Query: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240
           RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP
Sbjct: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240

Query: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN
Sbjct: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 288

[Close]

BLAST of CmoCh20G004180 vs. NCBI nr
Match: KAG6570688.1 (Transcription factor BOA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 562.8 bits (1449), Expect = 1.7e-156
Identity = 283/288 (98.26%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60
           MEKKRECRFGDGNGCIN DERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS
Sbjct: 117 MEKKRECRFGDGNGCINDDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 176

Query: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120
           ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDEL SDSRKLR
Sbjct: 177 ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELGSDSRKLR 236

Query: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180
           RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM
Sbjct: 237 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 296

Query: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240
           RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP
Sbjct: 297 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 356

Query: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           MTYAPSPMMPMM YSMGAHGHGLSH+GM MVNLSTVPTHSCSTKGQHN
Sbjct: 357 MTYAPSPMMPMMFYSMGAHGHGLSHSGMPMVNLSTVPTHSCSTKGQHN 404

[Close]

BLAST of CmoCh20G004180 vs. NCBI nr
Match: XP_023511812.1 (transcription factor PCL1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.1 bits (1437), Expect = 4.3e-155
Identity = 280/288 (97.22%), Postives = 282/288 (97.92%), Query Frame = 0


Query: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60
           MEK RECRFGDGNGCINGDERVFQWEDGLPD EKLTPLSQSLVSQELASAFRILMEPHRS
Sbjct: 1   MEKNRECRFGDGNGCINGDERVFQWEDGLPDTEKLTPLSQSLVSQELASAFRILMEPHRS 60

Query: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120
           ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVIN+DEL SDSRKLR
Sbjct: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINVDELGSDSRKLR 120

Query: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180
           RIDCFKEANSAPRGES IEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM
Sbjct: 121 RIDCFKEANSAPRGESLIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180

Query: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240
           RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP
Sbjct: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240

Query: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKGQHN 289
           MTYAPSPMMPMM YSMGAHGHGLSHTGM MVNLSTVPTHSCSTKGQH+
Sbjct: 241 MTYAPSPMMPMMFYSMGAHGHGLSHTGMPMVNLSTVPTHSCSTKGQHD 288

[Close]

BLAST of CmoCh20G004180 vs. NCBI nr
Match: KAG7010535.1 (Transcription factor LUX, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.8 bits (1353), Expect = 2.4e-145
Identity = 265/272 (97.43%), Postives = 267/272 (98.16%), Query Frame = 0


Query: 1   MEKKRECRFGDGNGCINGDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60
           MEKKRECRFGDGNGCIN DERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS
Sbjct: 1   MEKKRECRFGDGNGCINDDERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRS 60

Query: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLR 120
           ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDEL SDSRKLR
Sbjct: 61  ISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELGSDSRKLR 120

Query: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180
           RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM
Sbjct: 121 RIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIM 180

Query: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240
           RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP
Sbjct: 181 RLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAPSADSQGNGYFPSTFP 240

Query: 241 MTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVN 273
           MTYAPSPMMPMM YSMGAHGHGLSH+GM M +
Sbjct: 241 MTYAPSPMMPMMFYSMGAHGHGLSHSGMPMTS 272

[Close]

BLAST of CmoCh20G004180 vs. NCBI nr
Match: XP_022944630.1 (transcription factor LUX-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 479.6 bits (1233), Expect = 1.9e-131
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 46  ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE 105
           ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE
Sbjct: 2   ELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDE 61

Query: 106 VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDV 165
           VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDV
Sbjct: 62  VINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDV 121

Query: 166 VSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAP 225
           VSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAP
Sbjct: 122 VSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHDSAP 181

Query: 226 SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKG 285
           SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKG
Sbjct: 182 SADSQGNGYFPSTFPMTYAPSPMMPMMLYSMGAHGHGLSHTGMLMVNLSTVPTHSCSTKG 241

Query: 286 QHN 289
           QHN
Sbjct: 242 QHN 244

[Close]

BLAST of CmoCh20G004180 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-40
Identity = 116/270 (42.96%), Postives = 147/270 (54.44%), Query Frame = 0


Query: 16  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILN 75
           ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ +
Sbjct: 12  VSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSS 71

Query: 76  ICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKE------- 135
           +  G S        N           +E ++ +      SDS+K +  +   +       
Sbjct: 72  LRGGSSGPNTSSSNN----------NVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP 131

Query: 136 --ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNV 195
             A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNV
Sbjct: 132 DSAMAAEEGDSGTEDLS-GKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 191

Query: 196 EGLTRENVASHLQKYRLYLKRTQ------PS------STTDEATQNSHDSAPSADSQGNG 255
           EGLTRENVASHLQKYRLYLKR Q      PS      S+T    Q+  D      S GN 
Sbjct: 192 EGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQSFQDIGGGGGSSGNV 251

Query: 256 YFPSTFPMTYAPSPMMPMMLYS--MGAHGH 262
             P   P  Y    MM M +Y+  MG  G+
Sbjct: 252 GVP--IPGAYGTQQMMQMPVYAHHMGMQGY 268

[Close]

BLAST of CmoCh20G004180 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-40
Identity = 116/270 (42.96%), Postives = 147/270 (54.44%), Query Frame = 0


Query: 16  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILN 75
           ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ +
Sbjct: 12  VSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSS 71

Query: 76  ICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKE------- 135
           +  G S        N           +E ++ +      SDS+K +  +   +       
Sbjct: 72  LRGGSSGPNTSSSNN----------NVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP 131

Query: 136 --ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNV 195
             A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNV
Sbjct: 132 DSAMAAEEGDSGTEDLS-GKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 191

Query: 196 EGLTRENVASHLQKYRLYLKRTQ------PS------STTDEATQNSHDSAPSADSQGNG 255
           EGLTRENVASHLQKYRLYLKR Q      PS      S+T    Q+  D      S GN 
Sbjct: 192 EGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQSFQDIGGGGGSSGNV 251

Query: 256 YFPSTFPMTYAPSPMMPMMLYS--MGAHGH 262
             P   P  Y    MM M +Y+  MG  G+
Sbjct: 252 GVP--IPGAYGTQQMMQMPVYAHHMGMQGY 268

[Close]

BLAST of CmoCh20G004180 vs. TAIR 10
Match: AT3G46640.3 (Homeodomain-like superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-40
Identity = 116/270 (42.96%), Postives = 147/270 (54.44%), Query Frame = 0


Query: 16  INGD-ERVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILN 75
           ++GD +RV +WE GLP  E L  LS SL+   LA AF I  E  R+I DV  AS+TT+ +
Sbjct: 12  VSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSS 71

Query: 76  ICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELRSDSRKLRRIDCFKE------- 135
           +  G S        N           +E ++ +      SDS+K +  +   +       
Sbjct: 72  LRGGSSGPNTSSSNN----------NVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP 131

Query: 136 --ANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNV 195
             A +A  G+S  ED +  +TLKRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+LMNV
Sbjct: 132 DSAMAAEEGDSGTEDLS-GKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 191

Query: 196 EGLTRENVASHLQKYRLYLKRTQ------PS------STTDEATQNSHDSAPSADSQGNG 255
           EGLTRENVASHLQKYRLYLKR Q      PS      S+T    Q+  D      S GN 
Sbjct: 192 EGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQSFQDIGGGGGSSGNV 251

Query: 256 YFPSTFPMTYAPSPMMPMMLYS--MGAHGH 262
             P   P  Y    MM M +Y+  MG  G+
Sbjct: 252 GVP--IPGAYGTQQMMQMPVYAHHMGMQGY 268

[Close]

BLAST of CmoCh20G004180 vs. TAIR 10
Match: AT5G59570.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 105/220 (47.73%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 11  DGNGCINGDE-RVFQWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASK 70
           DG     GDE R+ +WE GLP+ + LTPLSQ LV   LA AF ++ E  R+I DV  AS+
Sbjct: 14  DGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQ 73

Query: 71  TTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINLDELR---SDSRKLRRID--- 130
            T+ ++                  R    A    +EV++  E     SD +K ++ D   
Sbjct: 74  ITLSSL------------------RSSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGE 133

Query: 131 -CFKEANSAPRGESSIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRL 190
               E ++A  G+S  EDA+  +T KRPR+ WTPQLHKRFVDVV+HLG+K A PK IM+L
Sbjct: 134 AAAVEDSTAEEGDSGPEDAS-GKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQL 193

Query: 191 MNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEATQNSHD 223
           MNVEGLTRENVASHLQKYRLYLKR Q   TT+E   +S D
Sbjct: 194 MNVEGLTRENVASHLQKYRLYLKRIQ-GLTTEEDPYSSSD 213

[Close]

BLAST of CmoCh20G004180 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-30
Identity = 86/209 (41.15%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 24  QWEDGLPDAEKLTPLSQSLVSQELASAFRILMEPHRSISDVKSASKTTILNICDGQSEGY 83
           +WE+ LP  E+L P+SQSL+S +LA AF I    H                   G     
Sbjct: 11  RWEEELPSPEELMPISQSLISPDLALAFDIRTPNH-------------------GNGNSN 70

Query: 84  RGFELNYDQTRGEDAAMIE--SDEVINLDELRSDSRKLRRIDCFKEANSAPRGESSIEDA 143
           +    ++ QT     + ++  S +  +  E  +DS  L              G       
Sbjct: 71  QPHHHHHHQTTPPTPSQLQLPSSQANSSAEFAADSADL--------------GSGGAAGD 130

Query: 144 ALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMRLMNVEGLTRENVASHLQKYR 203
             ARTLKRPR+ WTPQLHKRFVD V+HLG+K A PK IM+LM+V+GLTRENVASHLQKYR
Sbjct: 131 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 186

Query: 204 LYLKRTQPSST-----TDEATQNSHDSAP 226
           LYLKR Q  S+     +D AT     S+P
Sbjct: 191 LYLKRMQGLSSGGGAGSDPATDRLFASSP 186

The following BLAST results are available for this feature:

BLAST of CmoCh20G004180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB4	5.3e-39	42.96	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q9LTH4	1.5e-38	47.73	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
Q94DH3	2.3e-34	42.19	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
O22210	6.1e-27	38.06	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q940D0	2.3e-18	39.38	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]

BLAST of CmoCh20G004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX19	3.7e-160	100.00	transcription factor LUX-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1FYS4	9.4e-132	100.00	transcription factor LUX-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0KH89	4.2e-124	79.59	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G19022...	[more]
A0A5D3CU36	8.0e-123	79.25	Transcription factor PCL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CKP6	8.0e-123	79.25	transcription factor PCL1 OS=Cucumis melo OX=3656 GN=LOC103502064 PE=4 SV=1	[more]

BLAST of CmoCh20G004180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944629.1	7.6e-160	100.00	transcription factor LUX-like isoform X1 [Cucurbita moschata]	[more]
KAG6570688.1	1.7e-156	98.26	Transcription factor BOA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023511812.1	4.3e-155	97.22	transcription factor PCL1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7010535.1	2.4e-145	97.43	Transcription factor LUX, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944630.1	1.9e-131	100.00	transcription factor LUX-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CmoCh20G004180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46640.1	3.8e-40	42.96	Homeodomain-like superfamily protein	[more]
AT3G46640.2	3.8e-40	42.96	Homeodomain-like superfamily protein	[more]
AT3G46640.3	3.8e-40	42.96	Homeodomain-like superfamily protein	[more]
AT5G59570.1	1.1e-39	47.73	Homeodomain-like superfamily protein	[more]
AT3G10760.1	2.7e-30	41.15	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 151..201 e-value: 2.4E-8 score: 34.1
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 151..205 score: 10.312378
None	No IPR available	GENE3D	1.10.10.60		coord: 146..207 e-value: 4.3E-30 score: 105.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..233
None	No IPR available	PANTHER	PTHR31442:SF21	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 18..285
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 150..202 e-value: 6.0E-23 score: 78.9
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 18..285
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 146..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G004180.1	CmoCh20G004180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity