CmoCh20G003730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G003730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SMR domain-containing protein isoform X1
Location	Cmo_Chr20: 1827518 .. 1832081 (-)
RNA-Seq Expression	CmoCh20G003730
Synteny	CmoCh20G003730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACCCTAGGAATAGGAAGAAGAAGAAGAAGATCCCGGCGGCTTTGGAGCCGGCCGCTGCTATTATTGTTGCCAAAGATGACATTAACGCCGTCGGCGCGGTGACCGAGGCGTTCTCGGCGGCTTCTTTGAACGATCCAGCAGCGCCTGCTTCTCGTGAAGCTAGGGTCGGCTCGAACGAAGATGCTGATGCTTTTGATTCTGGCTTCGGCGACTGTATCGATGATCTGACAACGACTTCGTCGTCCAGCGCGATCACGGCTTCGTGTTCGAGTTCGTATTCTTCGGAGGATGTTTTAGATTATAAGGGTTATATGGGGAAGAAGCAGAAGCGGATCGTTGCTTCCACGGGAACAGTATCCACTGTTTTAGGGAAGGATTATGTTCGGTCGTCCTTGAAGAGAGATTCGAGGAATAAATTCATGGAGTTTGACCATGGGAACATTTCTCAACAGGAGGCGGAGCAGTTCCTTTGCTCCATGCTTGGAAACGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTCTGTAAGTACCGTTCATATTCCTCATATCCCTTTCCTTAACGCGCTAAAGTTTATGGGAGAAATATTTAGATGTAATGGCGTGTGAATGGCAAACGATGCTATTTTTCCAGCTTGACTCATATTTGTTCGATGCATATTAATAACCTAAAAGTCATCCGCATATATCTGTAAATCGAGTAGATTATCTAATGTGGCGATGTAGGATAGATTATAAGTAAACTTCAAGATACATATTGAATCATCTGAAGAACACGGGTTAGCCATTCACAACTCTGTAGGTTCCACAAAAGATTTACAAAGATAAACAAGAAGGAGATAACTAAAATTAAACTTGGCTCCCAAAAGGTTCACAATGTAAGGGTATGCATCATTTTTTTTCCTACCTTGAGAGAAAGAATACAGACATCATATCAAGGCTGTAACTAAACCACATTGCAAATTTCAGGTTCCAATGCTCCAATTGGGAGAGAAGTTTCTAGGGAAAATATTTAGTTAGAACATCTTAAGTCCACCTTGTTTTGGAGCCATTTGTAATCCCCATTGGCTTGGGGATGTACCCCTATTCCCATGGTTCCATTATTTCATTGCTAATGAAAAGTCGTCTCCTATAGAACAATTTTGGTAGAAAAAGGGTTGACGATCAAGTTATTATTAAGGTCGTCGGAAGAGGTGTGAGCTCTTTCCAAGTTTCATGTCCCTCGTTTGGGTGTCTATCTCAAAAGACGTTTATAATTATCGTCTCTGTTACTTTTGGAATTACTGTTTTGGTGTTTTTCATGTTGTAACAAACTTAGATATTAGTTTTGTCGGTTCCTTGACTATCCAGTTTTGTCTCTGCAGGTCAATGTGGATATGATGTGGAGAAGGTACTGTGAGTTTACTACTTCTGTATATTGATTTTCTTCTATAATATTGTGTTGTCTGAAGTTTTCTACAGAATGTAACTTATTTGGGTCCTATTTACTACGTGAATATTTACTGTAGACATGCTAGATAATAATTTTTTTACTACCATGTTTTGTAATTCTAATTATGGGTTTTATCTAACTTCCCAGGCTTTAAATGTTTTACTTGATTTAGCTGCCCCTAGACAGTCTGGAAGTGATAGGTACTCACGTAATGGTGCTAACTTCGAACAAGATTTGAGATCTCCAGTTGAACAGATTGAAAATGTGAGGAAGATTTTTCCCCTTTTTGAAAAACCTTCTGCATTCAATCATGCAGATAAATATGCTTACTATCTGCTATATAATTTACACTCATCTTTCTGAAATATGGAATCATTTGAATTTTGTGGACAGTCAATAGATCGTGCATCCGATTCTACCTCCTATTCGTCTGAAAGTGAATTTCAAGAGAGTATATGGTCGATTGCTGCTGGTTGTAGGTAACTTGGTTTTTTTATTACTGTTTCTGTATTTAACCTCAATGAATTGAACATATAGTAGTACCTTTGGGTTCAACCTGACCCATCTATCATTCTAAATGTCTTTTGAGTTTTGAAGCGCCTGAGATAACATCCTTGGACATTGCTCTGTATTTTGAACTCGCAAGGTCTCATTCAAATCAAAATCGTGTTTTAAAAATAGGAATGATGTGAAGGTTCTTGGTGGTTCCGAAGTCGAAGAATCACAGCCCTCAAGACGTATTGAATCTGAGCTCCCTCAGACATTGTTAGAGACTTTATTCAACGTTCCGAGAAGTCCTGAATATGAACCCAGCGCCATGAATTGGAGAAGTATGGTTAAGAAAATGCAATCTCTGGGACCTGCCATTGATGTCACTGCCTTAAGTTGTGTCCAGGATACTTGTGACAATAAAGGTAATTTTGCAACTTCTTTATGTTATTTCTTTTGTATTATACTCTTTCCATCCTGTCCTTTTCATCAATTATGTAAAGAAAATTGAATCAAGCTAAATTTGTTTGTTGAGATCTTCCTAACTTTAGCTACCAATTGTGTTCAATGTTACAGCTAAAGATGACTATCAGTTCTACAGGAAAAATGCAAATCAGCATTGGGATTCCGCGAAATCCTATTACCAGAAGGTAATATACTTTTAGTACTTTACAGGCTTTTAATATCGGAACGAGTTTAGACTTATATATGGTCGCATTTTTCTTTAGGCAACAACGACGTATACAAAAGGAGAACGCAGTTATGCATCTTACCTATCAGAGCAGGTTTGTTCGCGTCAAAACGAATCTGCGTAATTCCAGCACGTGCATGGTTCATTTTTCTGGCTTTTTTTGTGTGTGTAGATTTTCTTTGTTGAATCTGTTCTGGCTTGTCCATTTATTTTATGAACTTCTCAATTAAATTAAGCGGATAATTCAGAAATCTTTTTAATCACCCTGTCCCTGTGAATGGTCAGTAAAATAACGTAGATTTTGATGAGAATAGCATACTCAGCTTAACCTATTGATTGTGCAGGGGAGAGCGCAAGCTAGACAGGCGCAGAAGGCTGATGACAAAGCAAGTCACAATATATTTATAGCCAGGTAATCCTATTGCTTAAAACTTAAAAGCTCCGCAATTTTCGTTTTTAAATGTGAAATTAAACAACCATTACTGATTGTTGCAGAAATAGAGAGATAGCGAATGTGATAACAATTGATTTGCATGGGCAACATGTGAAACAGGCAATGAGGCTTCTTAAAATGCACCTCCTATTTGGATCTTATGTTCCCTGTGAGTATACCACCTGCCAATACCTATGTTTTTATGCACTCCTTCCTGGTTCACGATAAATTTTTATGTTCACTGTTTTGCTCACTATATTTTTTTTTTTGTTTTGGAAAAAATCATTTTTACCCTCGTACTTGGCTCACTCAGTCAATTTTGACCTCATCTTTTCAAACTTCATCAAATTGAAACCTATACTTGAATAACTGGTGATGGGTGAGAAATTAGTACCCCTCCACAACACAAATTAGAAAATTCCCTTAGAACAAACTGATAGCTTACAAAACTTATGATAAATAACGTCCAACTCGATCAATTCACTTCACTCGATTCCGACAAAAATACTTTCATCCAACTACCATATATATATATTAAAAGAAAGATACATAACTTAGTTTAGGGGGTAATAATTTTTCATACTCATTCAAGTTTGAGTTTGATTTGATAAAGTTGAACGTCAAAATTGACTGTGAGCCAAGTAGAGGGTTAAAAATGGGATTTTTTTTCTTTGTATTTGCTATTGTAGCCATTCAGTCCCTGAGGGTTATCACCGGATGTGGATCTCATGGTGTAGGAAAATCAAAGCTGAAAACTTCGGTATGTGTTATATACTAAGCCTAGATGTTGTGGGTTTGGAGAATCATCTAATACTAACTTGGCATATGTTGTGTTGTTTGAGGGAATCATATAATGTGTCAACATTTTCGATGGCGCAGGTAATCAAACTCCTAGAAAATGAGGGTATCAAATGGAGTGAAGAGAATCGGGGAACCGTACTGATCAAGCTCAGTGGTTACAGAGAGTTTAACTTTCTGGATTCTCATAGCGATACCGAGTAAGATTTCTACTAATTCATTGAAATGTCCAACAACACATATAAATGTATGTATGACACCTTTTTAGCGCATAACGCAATTGATGAAGGGAAGGGCATTGGAGCTCGTTGTGTGAACATATAGAAAGTGGGTGTAGTTACACAGTTAGGCGAACAACTTAAATTAGGCCTCTAATAAACCATATCTAGTGTATAACTCGTAGTTATGCCCCTACACCATTTTTCCTTGCCCTTTGTAAGTTTAATCGACAAACTAAGTTGGCTTTTGCTGATTGAATGGTCATGTATTGCCTTTGTTGTTGTACCCTGTAGTTCTCCCCCTCCTTATATATTTCTGATTCTCTTTCTAGATCACTTTGATTGATAGATGCAATAGGAAAGATGTCATTTACCCTAAGATAAGATGGCCCATTACCTGAGATTGGTTATATATAGATTGCATTATAACATTCCCATGCTTGATCAATTCAAGGATAATAATGAGTATAGTTTAATAACCAAGGAATTCAAG

mRNA sequence

ATGAAGAACCCTAGGAATAGGAAGAAGAAGAAGAAGATCCCGGCGGCTTTGGAGCCGGCCGCTGCTATTATTGTTGCCAAAGATGACATTAACGCCGTCGGCGCGGTGACCGAGGCGTTCTCGGCGGCTTCTTTGAACGATCCAGCAGCGCCTGCTTCTCGTGAAGCTAGGGTCGGCTCGAACGAAGATGCTGATGCTTTTGATTCTGGCTTCGGCGACTGTATCGATGATCTGACAACGACTTCGTCGTCCAGCGCGATCACGGCTTCGTGTTCGAGTTCGTATTCTTCGGAGGATGTTTTAGATTATAAGGGTTATATGGGGAAGAAGCAGAAGCGGATCGTTGCTTCCACGGGAACAGTATCCACTGTTTTAGGGAAGGATTATGTTCGGTCGTCCTTGAAGAGAGATTCGAGGAATAAATTCATGGAGTTTGACCATGGGAACATTTCTCAACAGGAGGCGGAGCAGTTCCTTTGCTCCATGCTTGGAAACGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTCTGTCAATGTGGATATGATGTGGAGAAGGCTTTAAATGTTTTACTTGATTTAGCTGCCCCTAGACAGTCTGGAAGTGATAGGTACTCACGTAATGGTGCTAACTTCGAACAAGATTTGAGATCTCCAGTTGAACAGATTGAAAATTCAATAGATCGTGCATCCGATTCTACCTCCTATTCGTCTGAAAGTGAATTTCAAGAGAGTATATGGTCGATTGCTGCTGGTTGTAGGAATGATGTGAAGGTTCTTGGTGGTTCCGAAGTCGAAGAATCACAGCCCTCAAGACGTATTGAATCTGAGCTCCCTCAGACATTGTTAGAGACTTTATTCAACGTTCCGAGAAGTCCTGAATATGAACCCAGCGCCATGAATTGGAGAAGTATGGTTAAGAAAATGCAATCTCTGGGACCTGCCATTGATGTCACTGCCTTAAGTTGTGTCCAGGATACTTGTGACAATAAAGCTAAAGATGACTATCAGTTCTACAGGAAAAATGCAAATCAGCATTGGGATTCCGCGAAATCCTATTACCAGAAGGCAACAACGACGTATACAAAAGGAGAACGCAGTTATGCATCTTACCTATCAGAGCAGGGGAGAGCGCAAGCTAGACAGGCGCAGAAGGCTGATGACAAAGCAAGTCACAATATATTTATAGCCAGAAATAGAGAGATAGCGAATGTGATAACAATTGATTTGCATGGGCAACATGTGAAACAGGCAATGAGGCTTCTTAAAATGCACCTCCTATTTGGATCTTATGTTCCCTCCATTCAGTCCCTGAGGGTTATCACCGGATGTGGATCTCATGGTGTAGGAAAATCAAAGCTGAAAACTTCGGTAATCAAACTCCTAGAAAATGAGGGTATCAAATGGAGTGAAGAGAATCGGGGAACCGTACTGATCAAGCTCAGTGGTTACAGAGAGTTTAACTTTCTGGATTCTCATAGCGATACCGAGTAAGATTTCTACTAATTCATTGAAATGTCCAACAACACATATAAATGTATGTATGACACCTTTTTAGCGCATAACGCAATTGATGAAGGGAAGGGCATTGGAGCTCGTTGTGTGAACATATAGAAAGTGGGTGTAGTTACACAGTTAGGCGAACAACTTAAATTAGGCCTCTAATAAACCATATCTAGTGTATAACTCGTAGTTATGCCCCTACACCATTTTTCCTTGCCCTTTGTAAGTTTAATCGACAAACTAAGTTGGCTTTTGCTGATTGAATGGTCATGTATTGCCTTTGTTGTTGTACCCTGTAGTTCTCCCCCTCCTTATATATTTCTGATTCTCTTTCTAGATCACTTTGATTGATAGATGCAATAGGAAAGATGTCATTTACCCTAAGATAAGATGGCCCATTACCTGAGATTGGTTATATATAGATTGCATTATAACATTCCCATGCTTGATCAATTCAAGGATAATAATGAGTATAGTTTAATAACCAAGGAATTCAAG

Coding sequence (CDS)

ATGAAGAACCCTAGGAATAGGAAGAAGAAGAAGAAGATCCCGGCGGCTTTGGAGCCGGCCGCTGCTATTATTGTTGCCAAAGATGACATTAACGCCGTCGGCGCGGTGACCGAGGCGTTCTCGGCGGCTTCTTTGAACGATCCAGCAGCGCCTGCTTCTCGTGAAGCTAGGGTCGGCTCGAACGAAGATGCTGATGCTTTTGATTCTGGCTTCGGCGACTGTATCGATGATCTGACAACGACTTCGTCGTCCAGCGCGATCACGGCTTCGTGTTCGAGTTCGTATTCTTCGGAGGATGTTTTAGATTATAAGGGTTATATGGGGAAGAAGCAGAAGCGGATCGTTGCTTCCACGGGAACAGTATCCACTGTTTTAGGGAAGGATTATGTTCGGTCGTCCTTGAAGAGAGATTCGAGGAATAAATTCATGGAGTTTGACCATGGGAACATTTCTCAACAGGAGGCGGAGCAGTTCCTTTGCTCCATGCTTGGAAACGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTCTGTCAATGTGGATATGATGTGGAGAAGGCTTTAAATGTTTTACTTGATTTAGCTGCCCCTAGACAGTCTGGAAGTGATAGGTACTCACGTAATGGTGCTAACTTCGAACAAGATTTGAGATCTCCAGTTGAACAGATTGAAAATTCAATAGATCGTGCATCCGATTCTACCTCCTATTCGTCTGAAAGTGAATTTCAAGAGAGTATATGGTCGATTGCTGCTGGTTGTAGGAATGATGTGAAGGTTCTTGGTGGTTCCGAAGTCGAAGAATCACAGCCCTCAAGACGTATTGAATCTGAGCTCCCTCAGACATTGTTAGAGACTTTATTCAACGTTCCGAGAAGTCCTGAATATGAACCCAGCGCCATGAATTGGAGAAGTATGGTTAAGAAAATGCAATCTCTGGGACCTGCCATTGATGTCACTGCCTTAAGTTGTGTCCAGGATACTTGTGACAATAAAGCTAAAGATGACTATCAGTTCTACAGGAAAAATGCAAATCAGCATTGGGATTCCGCGAAATCCTATTACCAGAAGGCAACAACGACGTATACAAAAGGAGAACGCAGTTATGCATCTTACCTATCAGAGCAGGGGAGAGCGCAAGCTAGACAGGCGCAGAAGGCTGATGACAAAGCAAGTCACAATATATTTATAGCCAGAAATAGAGAGATAGCGAATGTGATAACAATTGATTTGCATGGGCAACATGTGAAACAGGCAATGAGGCTTCTTAAAATGCACCTCCTATTTGGATCTTATGTTCCCTCCATTCAGTCCCTGAGGGTTATCACCGGATGTGGATCTCATGGTGTAGGAAAATCAAAGCTGAAAACTTCGGTAATCAAACTCCTAGAAAATGAGGGTATCAAATGGAGTGAAGAGAATCGGGGAACCGTACTGATCAAGCTCAGTGGTTACAGAGAGTTTAACTTTCTGGATTCTCATAGCGATACCGAGTAA

Protein sequence

MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGSNEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGTVSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSAMNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAMRLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLIKLSGYREFNFLDSHSDTE

Homology

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BLAST of CmoCh20G003730 vs. ExPASy Swiss-Prot
Match: O65573 (SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana OX=3702 GN=PIPC PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.5e-92
Identity = 235/537 (43.76%), Postives = 325/537 (60.52%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVA---KDDI------------------NAVGAVTEA 60
           MK     KKKKK   A +P+     +   K D+                  N + ++ EA
Sbjct: 1   MKQKNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEA 60

Query: 61  FSAASLNDPAAPASREARVGSNEDADAFDSGFGDCIDDLTTTS----SSSAITASC---- 120
           F + S+ + A  A +EA    N+ A+   S   +  DD +T+S    SS   TAS     
Sbjct: 61  FCSVSMEE-AMAAYKEAGGDLNKAAEIL-SDLVESGDDPSTSSVASGSSGQETASTSEYG 120

Query: 121 --SSSYSSEDVLDYKGYMGKKQKRIVASTGTVSTVLGKDY-----VRSSLKRDSRNKFME 180
             SSS  SED+   + + G KQ R++A+TG VS+V+ KDY     VR       R+K + 
Sbjct: 121 AGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERSKELC 180

Query: 181 FDHGNISQQE-AEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGS 240
            +    + +E AEQFL SMLG++CELSMAVVRDVLCQCGYDV+ ALNVLLD++    S S
Sbjct: 181 GNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVLCQCGYDVDMALNVLLDMS----SSS 240

Query: 241 DRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGG 300
              S +G  F   +   + +           +S+ +++   E  W      R+  K L  
Sbjct: 241 TDDSLSGKCFGIGVSDSLAE-----------SSFDTDTSDCELFWGGDYSQRDYAKALMS 300

Query: 301 SEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSAMNWRSMVKKMQSLGPAIDVTALS 360
           S+   +      E  LPQ +LE+LFN+ ++P++E    +WR++ KKMQSLG  ID ++ S
Sbjct: 301 SQDPFATTQGIDELGLPQKVLESLFNIRQNPKHESKTTSWRNVAKKMQSLG--IDASSSS 360

Query: 361 CVQDTCDNKAKDD-YQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQAR 420
             +   +   KDD Y   RK AN  W+  KSYYQKA   Y+KG R++A+YLS++GR  ++
Sbjct: 361 GEEPHPNTFVKDDSYHELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASK 420

Query: 421 QAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAMRLLKMHLLFGSYVPSIQSLRVI 480
           QAQ+AD++AS +IF+ARN+ I NV+TIDLHGQHVK AM+LLK+HLLFGSYVPSIQ+LRVI
Sbjct: 421 QAQRADERASQDIFVARNKGIENVVTIDLHGQHVKPAMKLLKLHLLFGSYVPSIQTLRVI 480

Query: 481 TGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLIKL-SGYREFNFLDSHSDTE 499
           TGCG+ G GKSK+K SV+KLLE EG+++ EENRGT+LIKL  G REF+FLD+ SD++
Sbjct: 481 TGCGASGFGKSKVKQSVVKLLEREGVRYCEENRGTLLIKLDGGSREFSFLDTESDSD 518

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BLAST of CmoCh20G003730 vs. ExPASy Swiss-Prot
Match: Q9LUQ3 (Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana OX=3702 GN=SDE5 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-22
Identity = 111/409 (27.14%), Postives = 187/409 (45.72%), Query Frame = 0


Query: 110 KQKRIVASTGTVSTVLGKDYVRS------------SLKRDSRN---------KFMEFDHG 169
           + KR   S GTVS+V+GK+Y R+             LK +SR+         +  + + G
Sbjct: 94  RPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINSRDIPETEIWSEEMRKSNEG 153

Query: 170 NISQ--QEAEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGSDRY 229
            IS+   + E+F+  MLG   + S  V+  VL  CGYDV+K+   LLD      S + +Y
Sbjct: 154 KISRAPTDVEEFIVKMLGEGFQASQEVIHQVLGVCGYDVKKSTEKLLDF-----SDTKKY 213

Query: 230 SRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGGSEV 289
           +  G +          ++ + +D    STS  ++ E Q+   S+           G    
Sbjct: 214 ADVGIS---------NEVMSKVDPQRQSTS-CNQMELQKISQSV-----------GARTF 273

Query: 290 EESQPSRRIESELPQTLLETLFN----------VPRSPEYEPSAMNWRSMVKKMQSLGPA 349
             SQ  R  ++ L + +LE LF+          V R        +  R + K ++     
Sbjct: 274 TGSQEGRNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGERRPGVAGRPVFKPLEDPFQE 333

Query: 350 IDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQ 409
             V        + ++  +++++ +RK   +H +  K YY  A   ++KGE   A  L E+
Sbjct: 334 RVVAVKQSSNTSKEDDDENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERAHRLVEK 393

Query: 410 GRAQARQAQKADDKASHNIFIARNR-----EIANVITIDLHGQHVKQAMRLLKMHLLFGS 469
           G    ++A++ADDK+   +           E   V+T++++    K+A+RLLK  L++ S
Sbjct: 394 GHFFGQKAREADDKSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKRQLIYFS 453

Query: 470 YVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 481
            + S + LRV  G       KSK K  ++KLLE E I W+EE+ G V++
Sbjct: 454 GISSFKYLRVQLGEKKEDF-KSKRK-HIVKLLEGESIPWTEEDGGLVIM 474

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BLAST of CmoCh20G003730 vs. ExPASy Swiss-Prot
Match: Q08954 (Smr domain-containing protein YPL199C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YPL199C PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-07
Identity = 44/158 (27.85%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 330 DNKAKDDYQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQARQAQKADD 389
           ++   ++YQ  R+ A++ +        ++ T Y +G++  A  LSE+ +AQ + A+  + 
Sbjct: 19  NHSTDEEYQRLRRLADEAYKKRDQLSHESQTAYQQGDKKLAHELSEKSKAQLKTAEDFNM 78

Query: 390 KASHNIFIARNREIANVITIDLHGQHVKQAMRLLKMHLLFGSYVPSIQSLRVITGCGSHG 449
           +A+  +F+  N + ++   IDLHG +VK+A+ +L+  + F +   +   L VI G G H 
Sbjct: 79  QAAEYVFVENNAD-SSSNEIDLHGLYVKEALFILQKRIKF-AIDHNEPQLNVIVGKGLHS 138

Query: 450 V-GKSKLKTSVIKLLENEGIK--WSEENRGTVLIKLSG 485
             G +KLK S+ +     GI+    + N G ++++L G
Sbjct: 139 QNGIAKLKPSIEEFCAKHGIRNHLEKGNSGVLVLELQG 174

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BLAST of CmoCh20G003730 vs. ExPASy Swiss-Prot
Match: O64843 (Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana OX=3702 GN=CID7 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.5e-04
Identity = 46/157 (29.30%), Postives = 73/157 (46.50%), Query Frame = 0


Query: 337 YQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQARQAQKADDKASHNIF 396
           Y   R+ A  +      Y+++A   Y  G ++ A  LS +G+    Q + A  KA   I+
Sbjct: 408 YSELREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAIY 467

Query: 397 IARN-----REIANVITIDLHGQHVKQAMRLLKMHL-LFGSYVPSIQ---SLRVITGCGS 456
             RN         N   IDLHG HV +A+++LK  L +  S   + Q    + +  G G 
Sbjct: 468 RQRNPVGQGNSRGNERMIDLHGLHVSEALQVLKHELSVLRSTARATQERLQIYICVGTGH 527

Query: 457 HGVGK---SKLKTSVIK-LLENEGIKWSEENRGTVLI 481
           H  G    ++L  +V + LLE EG+ +SE   G + +
Sbjct: 528 HTRGSRTPARLPVAVQRYLLEEEGLDYSEPQAGLLRV 564

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BLAST of CmoCh20G003730 vs. ExPASy TrEMBL
Match: A0A6J1FTZ2 (SMR domain-containing protein At5g58720 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448772 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 5.9e-275
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS
Sbjct: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480
           RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI
Sbjct: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480

Query: 481 KLSGYREFNFLDSHSDTE 499
           KLSGYREFNFLDSHSDTE
Sbjct: 481 KLSGYREFNFLDSHSDTE 498

[Close]

BLAST of CmoCh20G003730 vs. ExPASy TrEMBL
Match: A0A6J1JHR5 (SMR domain-containing protein At5g58720 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484469 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 2.3e-266
Identity = 483/498 (96.99%), Postives = 489/498 (98.19%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEP+AA IVAKDDINAVGAVTEAFSAASLNDPAAP SREARV  
Sbjct: 1   MKNPRNRKKKKKIPAALEPSAANIVAKDDINAVGAVTEAFSAASLNDPAAPTSREARVDL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFD+GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDAGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSR+KFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRDKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRS  EQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSTAEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWS+AAGCRNDVKVLG SEV+ESQPSR IESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSMAAGCRNDVKVLGCSEVQESQPSRSIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREI NVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIENVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480
           RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGT+LI
Sbjct: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTILI 480

Query: 481 KLSGYREFNFLDSHSDTE 499
           KLSGYREFNFLDSHSDTE
Sbjct: 481 KLSGYREFNFLDSHSDTE 498

[Close]

BLAST of CmoCh20G003730 vs. ExPASy TrEMBL
Match: A0A6J1FVB4 (SMR domain-containing protein At5g58720 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448772 PE=4 SV=1)

HSP 1 Score: 830.1 bits (2143), Expect = 4.9e-237
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS
Sbjct: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVP 435
           RLLKMHLLFGSYVP
Sbjct: 421 RLLKMHLLFGSYVP 434

[Close]

BLAST of CmoCh20G003730 vs. ExPASy TrEMBL
Match: A0A6J1JCF5 (SMR domain-containing protein At5g58720 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484469 PE=4 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.4e-228
Identity = 420/434 (96.77%), Postives = 425/434 (97.93%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEP+AA IVAKDDINAVGAVTEAFSAASLNDPAAP SREARV  
Sbjct: 1   MKNPRNRKKKKKIPAALEPSAANIVAKDDINAVGAVTEAFSAASLNDPAAPTSREARVDL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFD+GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDAGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSR+KFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRDKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRS  EQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSTAEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWS+AAGCRNDVKVLG SEV+ESQPSR IESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSMAAGCRNDVKVLGCSEVQESQPSRSIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREI NVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIENVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVP 435
           RLLKMHLLFGSYVP
Sbjct: 421 RLLKMHLLFGSYVP 434

[Close]

BLAST of CmoCh20G003730 vs. ExPASy TrEMBL
Match: A0A6J1D2N8 (SMR domain-containing protein At5g58720 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017023 PE=4 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 1.2e-222
Identity = 419/504 (83.13%), Postives = 444/504 (88.10%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRN+KKKKK   A  P A  IV K+D+N VGAVTEAFS ASLNDP AP S E RVG 
Sbjct: 1   MKNPRNKKKKKKASGAPGPDADKIVTKNDVNVVGAVTEAFSVASLNDP-APVSGEPRVGL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDA++ D+GFGD  D+LTTTSSSSAITASCSSSYSSEDVLDYK Y GKKQKR++A+TGT
Sbjct: 61  NEDAESLDAGFGDYTDNLTTTSSSSAITASCSSSYSSEDVLDYKDYKGKKQKRVIAATGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           +STVLGKDYVRSSLKRDSRNKFMEFDHG ISQQEAEQFLCSMLG+ECELSMAVVRDVLCQ
Sbjct: 121 ISTVLGKDYVRSSLKRDSRNKFMEFDHGKISQQEAEQFLCSMLGDECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDL--AAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYS 240
           CGYDVEKALNVLLDL  A+  QSG+ RYS NG NF+QD  SPVEQ+EN IDRASDSTSYS
Sbjct: 181 CGYDVEKALNVLLDLTAASSEQSGTGRYSCNGGNFKQDFGSPVEQMENLIDRASDSTSYS 240

Query: 241 SESEFQESIWSIAAGC---RNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPE 300
           SESEFQESIWS AA C   RND K L GS+ +  Q SR IES+LPQTLLETLFNV RS E
Sbjct: 241 SESEFQESIWSFAAACRKGRNDAKFLAGSKGQAPQSSRSIESDLPQTLLETLFNVSRSHE 300

Query: 301 YEPSAMNWRSMVKKMQSLGPAIDVTALSCVQDTCDN-KAKDDYQFYRKNANQHWDSAKSY 360
           YEPS MNWRSMV+KMQSLGPAIDV A SCVQDT DN KAKDDYQ YRKNANQHWDS KSY
Sbjct: 301 YEPSTMNWRSMVEKMQSLGPAIDVYASSCVQDTYDNSKAKDDYQLYRKNANQHWDSMKSY 360

Query: 361 YQKATTTYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQ 420
           Y KAT  Y KGER+YASYLSEQGRAQ RQAQKADDKASHNIFIARNR+I NVITIDLHGQ
Sbjct: 361 YHKATAAYAKGERNYASYLSEQGRAQNRQAQKADDKASHNIFIARNRDIENVITIDLHGQ 420

Query: 421 HVKQAMRLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEEN 480
           HVKQAMRLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKW+EEN
Sbjct: 421 HVKQAMRLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWNEEN 480

Query: 481 RGTVLIKLSGYREFNFLDSHSDTE 499
           RGT+LIKLSGYREFNFLDS+SDTE
Sbjct: 481 RGTILIKLSGYREFNFLDSNSDTE 503

[Close]

BLAST of CmoCh20G003730 vs. NCBI nr
Match: XP_022944276.1 (SMR domain-containing protein At5g58720 isoform X1 [Cucurbita moschata])

HSP 1 Score: 956.1 bits (2470), Expect = 1.2e-274
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS
Sbjct: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480
           RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI
Sbjct: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480

Query: 481 KLSGYREFNFLDSHSDTE 499
           KLSGYREFNFLDSHSDTE
Sbjct: 481 KLSGYREFNFLDSHSDTE 498

[Close]

BLAST of CmoCh20G003730 vs. NCBI nr
Match: XP_023512926.1 (SMR domain-containing protein At5g58720 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 942.6 bits (2435), Expect = 1.4e-270
Identity = 490/498 (98.39%), Postives = 494/498 (99.20%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEP AAIIVAKDDINAVGAVTEAFSAASLNDPAA ASREARVG 
Sbjct: 1   MKNPRNRKKKKKIPAALEPTAAIIVAKDDINAVGAVTEAFSAASLNDPAANASREARVGL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDV+KALNVLLDLAAPRQSGSDRYSRNGA+FEQDLRSPVEQIENS+DRASDSTSYSSE
Sbjct: 181 CGYDVDKALNVLLDLAAPRQSGSDRYSRNGADFEQDLRSPVEQIENSLDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREI NVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIENVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480
           RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGT+LI
Sbjct: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTILI 480

Query: 481 KLSGYREFNFLDSHSDTE 499
           KLSGYREFNFLDSHSDTE
Sbjct: 481 KLSGYREFNFLDSHSDTE 498

[Close]

BLAST of CmoCh20G003730 vs. NCBI nr
Match: KAG6570655.1 (SMR domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 936.4 bits (2419), Expect = 1.0e-268
Identity = 490/498 (98.39%), Postives = 491/498 (98.59%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEPAAAIIV KDDINAVGAVTEAFSAASLNDPAAPASREARVG 
Sbjct: 1   MKNPRNRKKKKKIPAALEPAAAIIVVKDDINAVGAVTEAFSAASLNDPAAPASREARVGL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADA   GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADA---GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREI NVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIENVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480
           RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGT+LI
Sbjct: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTILI 480

Query: 481 KLSGYREFNFLDSHSDTE 499
           KL GYREFNFLDSHSDTE
Sbjct: 481 KLIGYREFNFLDSHSDTE 495

[Close]

BLAST of CmoCh20G003730 vs. NCBI nr
Match: XP_022986853.1 (SMR domain-containing protein At5g58720 isoform X1 [Cucurbita maxima])

HSP 1 Score: 927.5 bits (2396), Expect = 4.7e-266
Identity = 483/498 (96.99%), Postives = 489/498 (98.19%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEP+AA IVAKDDINAVGAVTEAFSAASLNDPAAP SREARV  
Sbjct: 1   MKNPRNRKKKKKIPAALEPSAANIVAKDDINAVGAVTEAFSAASLNDPAAPTSREARVDL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADAFD+GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADAFDAGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSR+KFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRDKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRS  EQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSTAEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWS+AAGCRNDVKVLG SEV+ESQPSR IESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSMAAGCRNDVKVLGCSEVQESQPSRSIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREI NVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIENVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 480
           RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGT+LI
Sbjct: 421 RLLKMHLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTILI 480

Query: 481 KLSGYREFNFLDSHSDTE 499
           KLSGYREFNFLDSHSDTE
Sbjct: 481 KLSGYREFNFLDSHSDTE 498

[Close]

BLAST of CmoCh20G003730 vs. NCBI nr
Match: KAG7010505.1 (SMR domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 922.9 bits (2384), Expect = 1.2e-264
Identity = 489/514 (95.14%), Postives = 491/514 (95.53%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVAKDDINAVGAVTEAFSAASLNDPAAPASREARVGS 60
           MKNPRNRKKKKKIPAALEPAAAIIV KDDINAVGAVTEAFSAASLNDPAAPASREARVG 
Sbjct: 1   MKNPRNRKKKKKIPAALEPAAAIIVVKDDINAVGAVTEAFSAASLNDPAAPASREARVGL 60

Query: 61  NEDADAFDSGFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120
           NEDADA   GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT
Sbjct: 61  NEDADA---GFGDCIDDLTTTSSSSAITASCSSSYSSEDVLDYKGYMGKKQKRIVASTGT 120

Query: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180
           VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ
Sbjct: 121 VSTVLGKDYVRSSLKRDSRNKFMEFDHGNISQQEAEQFLCSMLGNECELSMAVVRDVLCQ 180

Query: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240
           CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE
Sbjct: 181 CGYDVEKALNVLLDLAAPRQSGSDRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSE 240

Query: 241 SEFQESIWSIAAGCRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300
           SEFQESIWSIAAG RNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA
Sbjct: 241 SEFQESIWSIAAGFRNDVKVLGGSEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSA 300

Query: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360
           MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT
Sbjct: 301 MNWRSMVKKMQSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATT 360

Query: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAM 420
           TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREI NVITIDLHGQHVKQAM
Sbjct: 361 TYTKGERSYASYLSEQGRAQARQAQKADDKASHNIFIARNREIENVITIDLHGQHVKQAM 420

Query: 421 RLLKMHLLFGSYV----------------PSIQSLRVITGCGSHGVGKSKLKTSVIKLLE 480
           RLLKMHLLFGSYV                P+IQSLRVITGCGSHGVGKSKLKTSVIKLLE
Sbjct: 421 RLLKMHLLFGSYVPCEYTTCHYLCFFTLLPAIQSLRVITGCGSHGVGKSKLKTSVIKLLE 480

Query: 481 NEGIKWSEENRGTVLIKLSGYREFNFLDSHSDTE 499
           NEGIKWSEENRGT+LIKLSGYREFNFLDSHSDTE
Sbjct: 481 NEGIKWSEENRGTILIKLSGYREFNFLDSHSDTE 511

[Close]

BLAST of CmoCh20G003730 vs. TAIR 10
Match: AT5G58720.1 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 340.9 bits (873), Expect = 1.7e-93
Identity = 235/537 (43.76%), Postives = 325/537 (60.52%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVA---KDDI------------------NAVGAVTEA 60
           MK     KKKKK   A +P+     +   K D+                  N + ++ EA
Sbjct: 1   MKQKNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEA 60

Query: 61  FSAASLNDPAAPASREARVGSNEDADAFDSGFGDCIDDLTTTS----SSSAITASC---- 120
           F + S+ + A  A +EA    N+ A+   S   +  DD +T+S    SS   TAS     
Sbjct: 61  FCSVSMEE-AMAAYKEAGGDLNKAAEIL-SDLVESGDDPSTSSVASGSSGQETASTSEYG 120

Query: 121 --SSSYSSEDVLDYKGYMGKKQKRIVASTGTVSTVLGKDY-----VRSSLKRDSRNKFME 180
             SSS  SED+   + + G KQ R++A+TG VS+V+ KDY     VR       R+K + 
Sbjct: 121 AGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERSKELC 180

Query: 181 FDHGNISQQE-AEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGS 240
            +    + +E AEQFL SMLG++CELSMAVVRDVLCQCGYDV+ ALNVLLD++    S S
Sbjct: 181 GNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVLCQCGYDVDMALNVLLDMS----SSS 240

Query: 241 DRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGG 300
              S +G  F   +   + +           +S+ +++   E  W      R+  K L  
Sbjct: 241 TDDSLSGKCFGIGVSDSLAE-----------SSFDTDTSDCELFWGGDYSQRDYAKALMS 300

Query: 301 SEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSAMNWRSMVKKMQSLGPAIDVTALS 360
           S+   +      E  LPQ +LE+LFN+ ++P++E    +WR++ KKMQSLG  ID ++ S
Sbjct: 301 SQDPFATTQGIDELGLPQKVLESLFNIRQNPKHESKTTSWRNVAKKMQSLG--IDASSSS 360

Query: 361 CVQDTCDNKAKDD-YQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQAR 420
             +   +   KDD Y   RK AN  W+  KSYYQKA   Y+KG R++A+YLS++GR  ++
Sbjct: 361 GEEPHPNTFVKDDSYHELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASK 420

Query: 421 QAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAMRLLKMHLLFGSYVPSIQSLRVI 480
           QAQ+AD++AS +IF+ARN+ I NV+TIDLHGQHVK AM+LLK+HLLFGSYVPSIQ+LRVI
Sbjct: 421 QAQRADERASQDIFVARNKGIENVVTIDLHGQHVKPAMKLLKLHLLFGSYVPSIQTLRVI 480

Query: 481 TGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLIKL-SGYREFNFLDSHSDTE 499
           TGCG+ G GKSK+K SV+KLLE EG+++ EENRGT+LIKL  G REF+FLD+ SD++
Sbjct: 481 TGCGASGFGKSKVKQSVVKLLEREGVRYCEENRGTLLIKLDGGSREFSFLDTESDSD 518

[Close]

BLAST of CmoCh20G003730 vs. TAIR 10
Match: AT5G58720.3 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 291.6 bits (745), Expect = 1.2e-78
Identity = 210/497 (42.25%), Postives = 291/497 (58.55%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVA---KDDI------------------NAVGAVTEA 60
           MK     KKKKK   A +P+     +   K D+                  N + ++ EA
Sbjct: 1   MKQKNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEA 60

Query: 61  FSAASLNDPAAPASREARVGSNEDADAFDSGFGDCIDDLTTTS----SSSAITASC---- 120
           F + S+ + A  A +EA    N+ A+   S   +  DD +T+S    SS   TAS     
Sbjct: 61  FCSVSMEE-AMAAYKEAGGDLNKAAEIL-SDLVESGDDPSTSSVASGSSGQETASTSEYG 120

Query: 121 --SSSYSSEDVLDYKGYMGKKQKRIVASTGTVSTVLGKDY-----VRSSLKRDSRNKFME 180
             SSS  SED+   + + G KQ R++A+TG VS+V+ KDY     VR       R+K + 
Sbjct: 121 AGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERSKELC 180

Query: 181 FDHGNISQQE-AEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGS 240
            +    + +E AEQFL SMLG++CELSMAVVRDVLCQCGYDV+ ALNVLLD++    S S
Sbjct: 181 GNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVLCQCGYDVDMALNVLLDMS----SSS 240

Query: 241 DRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGG 300
              S +G  F   +   + +           +S+ +++   E  W      R+  K L  
Sbjct: 241 TDDSLSGKCFGIGVSDSLAE-----------SSFDTDTSDCELFWGGDYSQRDYAKALMS 300

Query: 301 SEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSAMNWRSMVKKMQSLGPAIDVTALS 360
           S+   +      E  LPQ +LE+LFN+ ++P++E    +WR++ KKMQSLG  ID ++ S
Sbjct: 301 SQDPFATTQGIDELGLPQKVLESLFNIRQNPKHESKTTSWRNVAKKMQSLG--IDASSSS 360

Query: 361 CVQDTCDNKAKDD-YQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQAR 420
             +   +   KDD Y   RK AN  W+  KSYYQKA   Y+KG R++A+YLS++GR  ++
Sbjct: 361 GEEPHPNTFVKDDSYHELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASK 420

Query: 421 QAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAMRLLKMHLLFGSYVPSIQSLRVI 460
           QAQ+AD++AS +IF+ARN+ I NV+TIDLHGQHVK AM+LLK+HLLFGSYVPSIQ+LRVI
Sbjct: 421 QAQRADERASQDIFVARNKGIENVVTIDLHGQHVKPAMKLLKLHLLFGSYVPSIQTLRVI 478

[Close]

BLAST of CmoCh20G003730 vs. TAIR 10
Match: AT5G58720.2 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-67
Identity = 191/472 (40.47%), Postives = 269/472 (56.99%), Query Frame = 0


Query: 1   MKNPRNRKKKKKIPAALEPAAAIIVA---KDDI------------------NAVGAVTEA 60
           MK     KKKKK   A +P+     +   K D+                  N + ++ EA
Sbjct: 1   MKQKNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEA 60

Query: 61  FSAASLNDPAAPASREARVGSNEDADAFDSGFGDCIDDLTTTS----SSSAITASC---- 120
           F + S+ + A  A +EA    N+ A+   S   +  DD +T+S    SS   TAS     
Sbjct: 61  FCSVSMEE-AMAAYKEAGGDLNKAAEIL-SDLVESGDDPSTSSVASGSSGQETASTSEYG 120

Query: 121 --SSSYSSEDVLDYKGYMGKKQKRIVASTGTVSTVLGKDY-----VRSSLKRDSRNKFME 180
             SSS  SED+   + + G KQ R++A+TG VS+V+ KDY     VR       R+K + 
Sbjct: 121 AGSSSSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERSKELC 180

Query: 181 FDHGNISQQE-AEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGS 240
            +    + +E AEQFL SMLG++CELSMAVVRDVLCQCGYDV+ ALNVLLD++    S S
Sbjct: 181 GNGKKAADREKAEQFLSSMLGDDCELSMAVVRDVLCQCGYDVDMALNVLLDMS----SSS 240

Query: 241 DRYSRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGG 300
              S +G  F   +   + +           +S+ +++   E  W      R+  K L  
Sbjct: 241 TDDSLSGKCFGIGVSDSLAE-----------SSFDTDTSDCELFWGGDYSQRDYAKALMS 300

Query: 301 SEVEESQPSRRIESELPQTLLETLFNVPRSPEYEPSAMNWRSMVKKMQSLGPAIDVTALS 360
           S+   +      E  LPQ +LE+LFN+ ++P++E    +WR++ KKMQSLG  ID ++ S
Sbjct: 301 SQDPFATTQGIDELGLPQKVLESLFNIRQNPKHESKTTSWRNVAKKMQSLG--IDASSSS 360

Query: 361 CVQDTCDNKAKDD-YQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQGRAQAR 420
             +   +   KDD Y   RK AN  W+  KSYYQKA   Y+KG R++A+YLS++GR  ++
Sbjct: 361 GEEPHPNTFVKDDSYHELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASK 420

Query: 421 QAQKADDKASHNIFIARNREIANVITIDLHGQHVKQAMRLLKMHLLFGSYVP 435
           QAQ+AD++AS +IF+ARN+ I NV+TIDLHGQHVK AM+LLK+HLLFGSYVP
Sbjct: 421 QAQRADERASQDIFVARNKGIENVVTIDLHGQHVKPAMKLLKLHLLFGSYVP 453

[Close]

BLAST of CmoCh20G003730 vs. TAIR 10
Match: AT3G15390.1 (silencing defective 5 )

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-23
Identity = 111/409 (27.14%), Postives = 187/409 (45.72%), Query Frame = 0


Query: 110 KQKRIVASTGTVSTVLGKDYVRS------------SLKRDSRN---------KFMEFDHG 169
           + KR   S GTVS+V+GK+Y R+             LK +SR+         +  + + G
Sbjct: 94  RPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINSRDIPETEIWSEEMRKSNEG 153

Query: 170 NISQ--QEAEQFLCSMLGNECELSMAVVRDVLCQCGYDVEKALNVLLDLAAPRQSGSDRY 229
            IS+   + E+F+  MLG   + S  V+  VL  CGYDV+K+   LLD      S + +Y
Sbjct: 154 KISRAPTDVEEFIVKMLGEGFQASQEVIHQVLGVCGYDVKKSTEKLLDF-----SDTKKY 213

Query: 230 SRNGANFEQDLRSPVEQIENSIDRASDSTSYSSESEFQESIWSIAAGCRNDVKVLGGSEV 289
           +  G +          ++ + +D    STS  ++ E Q+   S+           G    
Sbjct: 214 ADVGIS---------NEVMSKVDPQRQSTS-CNQMELQKISQSV-----------GARTF 273

Query: 290 EESQPSRRIESELPQTLLETLFN----------VPRSPEYEPSAMNWRSMVKKMQSLGPA 349
             SQ  R  ++ L + +LE LF+          V R        +  R + K ++     
Sbjct: 274 TGSQEGRNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGERRPGVAGRPVFKPLEDPFQE 333

Query: 350 IDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATTTYTKGERSYASYLSEQ 409
             V        + ++  +++++ +RK   +H +  K YY  A   ++KGE   A  L E+
Sbjct: 334 RVVAVKQSSNTSKEDDDENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERAHRLVEK 393

Query: 410 GRAQARQAQKADDKASHNIFIARNR-----EIANVITIDLHGQHVKQAMRLLKMHLLFGS 469
           G    ++A++ADDK+   +           E   V+T++++    K+A+RLLK  L++ S
Sbjct: 394 GHFFGQKAREADDKSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKRQLIYFS 453

Query: 470 YVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 481
            + S + LRV  G       KSK K  ++KLLE E I W+EE+ G V++
Sbjct: 454 GISSFKYLRVQLGEKKEDF-KSKRK-HIVKLLEGESIPWTEEDGGLVIM 474

[Close]

BLAST of CmoCh20G003730 vs. TAIR 10
Match: AT3G15390.2 (silencing defective 5 )

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-13
Identity = 64/235 (27.23%), Postives = 111/235 (47.23%), Query Frame = 0


Query: 261 LGGSEVEESQPSRRIESELPQTLLETLFN----------VPRSPEYEPSAMNWRSMVKKM 320
           +G      SQ  R  ++ L + +LE LF+          V R        +  R + K +
Sbjct: 51  VGARTFTGSQEGRNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGERRPGVAGRPVFKPL 110

Query: 321 QSLGPAIDVTALSCVQDTCDNKAKDDYQFYRKNANQHWDSAKSYYQKATTTYTKGERSYA 380
           +       V        + ++  +++++ +RK   +H +  K YY  A   ++KGE   A
Sbjct: 111 EDPFQERVVAVKQSSNTSKEDDDENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERA 170

Query: 381 SYLSEQGRAQARQAQKADDKASHNIFIARNR-----EIANVITIDLHGQHVKQAMRLLKM 440
             L E+G    ++A++ADDK+   +           E   V+T++++    K+A+RLLK 
Sbjct: 171 HRLVEKGHFFGQKAREADDKSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKR 230

Query: 441 HLLFGSYVPSIQSLRVITGCGSHGVGKSKLKTSVIKLLENEGIKWSEENRGTVLI 481
            L++ S + S + LRV  G       KSK K  ++KLLE E I W+EE+ G V++
Sbjct: 231 QLIYFSGISSFKYLRVQLGEKKEDF-KSKRK-HIVKLLEGESIPWTEEDGGLVIM 283

The following BLAST results are available for this feature:

BLAST of CmoCh20G003730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65573	2.5e-92	43.76	SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana OX=3702 GN=PIPC ...	[more]
Q9LUQ3	1.6e-22	27.14	Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana OX=3702 GN=SDE5 ...	[more]
Q08954	1.9e-07	27.85	Smr domain-containing protein YPL199C OS=Saccharomyces cerevisiae (strain ATCC 2...	[more]
O64843	1.5e-04	29.30	Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CmoCh20G003730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTZ2	5.9e-275	100.00	SMR domain-containing protein At5g58720 isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JHR5	2.3e-266	96.99	SMR domain-containing protein At5g58720 isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1FVB4	4.9e-237	100.00	SMR domain-containing protein At5g58720 isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JCF5	1.4e-228	96.77	SMR domain-containing protein At5g58720 isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1D2N8	1.2e-222	83.13	SMR domain-containing protein At5g58720 isoform X3 OS=Momordica charantia OX=367...	[more]

BLAST of CmoCh20G003730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944276.1	1.2e-274	100.00	SMR domain-containing protein At5g58720 isoform X1 [Cucurbita moschata]	[more]
XP_023512926.1	1.4e-270	98.39	SMR domain-containing protein At5g58720 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6570655.1	1.0e-268	98.39	SMR domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022986853.1	4.7e-266	96.99	SMR domain-containing protein At5g58720 isoform X1 [Cucurbita maxima]	[more]
KAG7010505.1	1.2e-264	95.14	SMR domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh20G003730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58720.1	1.7e-93	43.76	smr (Small MutS Related) domain-containing protein	[more]
AT5G58720.3	1.2e-78	42.25	smr (Small MutS Related) domain-containing protein	[more]
AT5G58720.2	1.3e-67	40.47	smr (Small MutS Related) domain-containing protein	[more]
AT3G15390.1	1.1e-23	27.14	silencing defective 5	[more]
AT3G15390.2	2.3e-13	27.23	silencing defective 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 406..483 e-value: 9.1E-16 score: 68.4
IPR002625	Smr domain	PFAM	PF01713	Smr	coord: 409..480 e-value: 4.4E-6 score: 27.0
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 409..483 score: 15.180734
IPR013899	Domain of unknown function DUF1771	SMART	SM01162	DUF1771_2	coord: 336..401 e-value: 7.1E-17 score: 72.1
IPR013899	Domain of unknown function DUF1771	PFAM	PF08590	DUF1771	coord: 337..400 e-value: 8.1E-15 score: 55.0
None	No IPR available	GENE3D	3.30.1370.110		coord: 384..483 e-value: 9.2E-19 score: 69.4
None	No IPR available	PANTHER	PTHR47676	OS01G0225100 PROTEIN	coord: 1..498
IPR036063	Smr domain superfamily	SUPERFAMILY	160443	SMR domain-like	coord: 408..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G003730.1	CmoCh20G003730.1	mRNA