CmoCh20G003000 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G003000
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Filamentous hemagglutinin transporter
Location	Cmo_Chr20: 1467404 .. 1468530 (-)
RNA-Seq Expression	CmoCh20G003000
Synteny	CmoCh20G003000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACAAGAAAACCGACACTTCCATTTCTCTCTCTACTTTCTCTCTCTTCCTGTCTGAGAACAAATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGTACGATTTTTCCCCTTGAATTTTAAATTTTTAATTATTTTGTGGCTCTTGATGTTTGATTAATCAAGACCCATGTTGGAATTTTCGTTAAAAATGAAACAATTTTTTGTTTTTTTGTGTGTAATTTTGGACGGCAATGAAACAGAGTCATATTCAAAAAAAGCAGAGTTCAATTATTTGAAGTGTCTTTTTGTGTGTGGATGATTAATTGATTGAATTTTAATTATTTCAGTCAGGAAAAATGTTCATTCAAAGATGCAATGTTCAAGATTTCAACAACAACAATCATCAAATGAATCAAACAGTACCAAAGCTTCAAGATTTGAACTTTCCACCGTCGCCGCCCAATTACCCAAAATTCCGTTTCTCAACCCATTTAATGGACGAAACCAATTTGGATTTGAAATTAGTTTCATCGCCGTCGCAGTCGCCGTCGCAGAGGACTAATTATCAGAGCGTTTGTACCTTAGACAAGGTCAAATCGGCGTTAGAACGAGCCGAGAGAAATCCCATCAGAAAACGGTCGTCACTCTGGAAATCATCGCCGTCGGTGTCGCCGTCGCCGTCTTATTCCTCCTCCTCGTCGTCAGCAGCTGGAAAGGAGTTTCAAGAAGAACCCAACTTGAAACATTTGTCGTCAACGCCGATTGTCGCCGGCTGCCCTGGTTGTTTGTCCTACGTGTTGGTGATGAAGAACAATCCGACATGCCCACGGTGTAGCTCCGTCGTACCGTTGCCGGCGGCGAAGAAACCTCGTATTGATCTGAACATTTCAATTTGATTGAAAGAGCGACAGAAATTATCATCTTCAAGACATAGATTTCATTGTTTTTTTTTTTCTTTTTCTTTTTTTTTTTCTTTTTGGTAGCTGTACT

mRNA sequence

GGACAAGAAAACCGACACTTCCATTTCTCTCTCTACTTTCTCTCTCTTCCTGTCTGAGAACAAATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGTCAGGAAAAATGTTCATTCAAAGATGCAATGTTCAAGATTTCAACAACAACAATCATCAAATGAATCAAACAGTACCAAAGCTTCAAGATTTGAACTTTCCACCGTCGCCGCCCAATTACCCAAAATTCCGTTTCTCAACCCATTTAATGGACGAAACCAATTTGGATTTGAAATTAGTTTCATCGCCGTCGCAGTCGCCGTCGCAGAGGACTAATTATCAGAGCGTTTGTACCTTAGACAAGGTCAAATCGGCGTTAGAACGAGCCGAGAGAAATCCCATCAGAAAACGGTCGTCACTCTGGAAATCATCGCCGTCGGTGTCGCCGTCGCCGTCTTATTCCTCCTCCTCGTCGTCAGCAGCTGGAAAGGAGTTTCAAGAAGAACCCAACTTGAAACATTTGTCGTCAACGCCGATTGTCGCCGGCTGCCCTGGTTGTTTGTCCTACGTGTTGGTGATGAAGAACAATCCGACATGCCCACGGTGTAGCTCCGTCGTACCGTTGCCGGCGGCGAAGAAACCTCGTATTGATCTGAACATTTCAATTTGATTGAAAGAGCGACAGAAATTATCATCTTCAAGACATAGATTTCATTGTTTTTTTTTTTCTTTTTCTTTTTTTTTTTCTTTTTGGTAGCTGTACT

Coding sequence (CDS)

ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGTCAGGAAAAATGTTCATTCAAAGATGCAATGTTCAAGATTTCAACAACAACAATCATCAAATGAATCAAACAGTACCAAAGCTTCAAGATTTGAACTTTCCACCGTCGCCGCCCAATTACCCAAAATTCCGTTTCTCAACCCATTTAATGGACGAAACCAATTTGGATTTGAAATTAGTTTCATCGCCGTCGCAGTCGCCGTCGCAGAGGACTAATTATCAGAGCGTTTGTACCTTAGACAAGGTCAAATCGGCGTTAGAACGAGCCGAGAGAAATCCCATCAGAAAACGGTCGTCACTCTGGAAATCATCGCCGTCGGTGTCGCCGTCGCCGTCTTATTCCTCCTCCTCGTCGTCAGCAGCTGGAAAGGAGTTTCAAGAAGAACCCAACTTGAAACATTTGTCGTCAACGCCGATTGTCGCCGGCTGCCCTGGTTGTTTGTCCTACGTGTTGGTGATGAAGAACAATCCGACATGCCCACGGTGTAGCTCCGTCGTACCGTTGCCGGCGGCGAAGAAACCTCGTATTGATCTGAACATTTCAATTTGA

Protein sequence

MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRLDLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDLKLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSSSSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRIDLNISI

Homology

[Close]

BLAST of CmoCh20G003000 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-04
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 167 SPSVSPSPSYSSSSSSAAGKEF-QEEPNLKHLSS----TPIVAGCPGCLSYVLVMKNNPT 226
           SPS S + S +S  SS    E  Q+EP++++ +S    + ++ GCP CL YV++ +++P 
Sbjct: 27  SPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPK 86

Query: 227 CPRCSSVVPL 232
           CP+C S V L
Sbjct: 87  CPKCKSTVLL 96

[Close]

BLAST of CmoCh20G003000 vs. ExPASy TrEMBL
Match: A0A6J1FXV9 (uncharacterized protein LOC111448249 OS=Cucurbita moschata OX=3662 GN=LOC111448249 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.1e-132
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
           MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120
           DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL
Sbjct: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120

Query: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180
           KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS
Sbjct: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180

Query: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240
           SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID
Sbjct: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240

Query: 241 LNISI 246
           LNISI
Sbjct: 241 LNISI 245

[Close]

BLAST of CmoCh20G003000 vs. ExPASy TrEMBL
Match: A0A6J1JFF5 (uncharacterized protein LOC111483930 OS=Cucurbita maxima OX=3661 GN=LOC111483930 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.9e-125
Identity = 237/245 (96.73%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
           MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120
           DLKSGKMFIQRCNVQDF NNNHQ NQTVPKLQDLNFPPSPPNY KF FSTHLMDE NLDL
Sbjct: 61  DLKSGKMFIQRCNVQDF-NNNHQTNQTVPKLQDLNFPPSPPNYSKFHFSTHLMDEANLDL 120

Query: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180
           KLVSSPSQSP Q TNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS
Sbjct: 121 KLVSSPSQSPWQTTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180

Query: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240
           SSAA KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID
Sbjct: 181 SSAAAKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240

Query: 241 LNISI 246
           LNISI
Sbjct: 241 LNISI 244

[Close]

BLAST of CmoCh20G003000 vs. ExPASy TrEMBL
Match: A0A5D3CB81 (Putative YUP8H12R.23 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00220 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.4e-96
Identity = 206/258 (79.84%), Postives = 218/258 (84.50%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNK----AAAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
           MAAEVSSLVRVLT+YNK      AGN+S  EKL  LITRDLL+GG     ESQELDLDLH
Sbjct: 1   MAAEVSSLVRVLTTYNKEDRHLTAGNESTAEKLAPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61  VPSGWEKRLDLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTH 120
           VPSGWE+RLDLKSGKMFIQRCNVQDFNNN    NQTVPKLQDLNFPPS PNY KF+ + H
Sbjct: 61  VPSGWERRLDLKSGKMFIQRCNVQDFNNN----NQTVPKLQDLNFPPS-PNYSKFQLTNH 120

Query: 121 LMDETNLDLKLVSSPSQSPSQ---RTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSP 180
           L+DET+LDLKLVSS S SPS    R+NYQSVCTLDKVKSALERAERNPIRKRSSLWKS  
Sbjct: 121 LVDETSLDLKLVSSLSSSPSSSSPRSNYQSVCTLDKVKSALERAERNPIRKRSSLWKS-- 180

Query: 181 SVSPSPSYSSSSSSAAG-KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSS 240
             SPSPSYSSSSSSAA  KEF+EE  LK  SS+PI AGCPGCLSYVLVMKNNPTCPRCSS
Sbjct: 181 --SPSPSYSSSSSSAAADKEFREEEKLK-CSSSPIAAGCPGCLSYVLVMKNNPTCPRCSS 240

Query: 241 VVPLPAAKKPRIDLNISI 246
           +VPLPAAKKPRIDLNISI
Sbjct: 241 IVPLPAAKKPRIDLNISI 248

[Close]

BLAST of CmoCh20G003000 vs. ExPASy TrEMBL
Match: A0A1S3C2I3 (uncharacterized protein LOC103496294 OS=Cucumis melo OX=3656 GN=LOC103496294 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.4e-96
Identity = 206/258 (79.84%), Postives = 218/258 (84.50%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNK----AAAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
           MAAEVSSLVRVLT+YNK      AGN+S  EKL  LITRDLL+GG     ESQELDLDLH
Sbjct: 1   MAAEVSSLVRVLTTYNKEDRHLTAGNESTAEKLAPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61  VPSGWEKRLDLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTH 120
           VPSGWE+RLDLKSGKMFIQRCNVQDFNNN    NQTVPKLQDLNFPPS PNY KF+ + H
Sbjct: 61  VPSGWERRLDLKSGKMFIQRCNVQDFNNN----NQTVPKLQDLNFPPS-PNYSKFQLTNH 120

Query: 121 LMDETNLDLKLVSSPSQSPSQ---RTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSP 180
           L+DET+LDLKLVSS S SPS    R+NYQSVCTLDKVKSALERAERNPIRKRSSLWKS  
Sbjct: 121 LVDETSLDLKLVSSLSSSPSSSSPRSNYQSVCTLDKVKSALERAERNPIRKRSSLWKS-- 180

Query: 181 SVSPSPSYSSSSSSAAG-KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSS 240
             SPSPSYSSSSSSAA  KEF+EE  LK  SS+PI AGCPGCLSYVLVMKNNPTCPRCSS
Sbjct: 181 --SPSPSYSSSSSSAAADKEFREEEKLK-CSSSPIAAGCPGCLSYVLVMKNNPTCPRCSS 240

Query: 241 VVPLPAAKKPRIDLNISI 246
           +VPLPAAKKPRIDLNISI
Sbjct: 241 IVPLPAAKKPRIDLNISI 248

[Close]

BLAST of CmoCh20G003000 vs. ExPASy TrEMBL
Match: A0A0A0KAN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137580 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.6e-95
Identity = 205/258 (79.46%), Postives = 217/258 (84.11%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNK----AAAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
           MAAEVSSLVRVLT+YNK       G++S  EKLT LITRDLL+GG     ESQELDLDLH
Sbjct: 1   MAAEVSSLVRVLTTYNKEDRHRTGGDESTAEKLTPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61  VPSGWEKRLDLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTH 120
           VPSGWE+RLDLKSGKMFIQRCNVQDFNNN    NQTVPKLQDLNFPPS PN  KF+ + H
Sbjct: 61  VPSGWERRLDLKSGKMFIQRCNVQDFNNN----NQTVPKLQDLNFPPS-PNCSKFQLTNH 120

Query: 121 LMDETNLDLKLVSSPSQSPSQ---RTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSP 180
           L+DET+LDLKLVSS S SPS    R+NYQSVCTLDKVKSALERAERNPIRKRSSLWKS  
Sbjct: 121 LVDETSLDLKLVSSLSSSPSSSSPRSNYQSVCTLDKVKSALERAERNPIRKRSSLWKS-- 180

Query: 181 SVSPSPSYSSSSSSAAG-KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSS 240
             SPSPSYSSSSSSAA  KEF+EE NLK LSS PI AGCPGCLSYVLVMKNNPTCPRCSS
Sbjct: 181 --SPSPSYSSSSSSAAAEKEFREEENLKCLSS-PIAAGCPGCLSYVLVMKNNPTCPRCSS 240

Query: 241 VVPLPAAKKPRIDLNISI 246
           +VPLPA KKPRIDLNISI
Sbjct: 241 IVPLPAVKKPRIDLNISI 248

[Close]

BLAST of CmoCh20G003000 vs. NCBI nr
Match: XP_022943495.1 (uncharacterized protein LOC111448249 [Cucurbita moschata] >KAG6570588.1 hypothetical protein SDJN03_29503, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010440.1 hypothetical protein SDJN02_27233 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.5 bits (1238), Expect = 4.4e-132
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
           MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120
           DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL
Sbjct: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120

Query: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180
           KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS
Sbjct: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180

Query: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240
           SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID
Sbjct: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240

Query: 241 LNISI 246
           LNISI
Sbjct: 241 LNISI 245

[Close]

BLAST of CmoCh20G003000 vs. NCBI nr
Match: XP_023512147.1 (uncharacterized protein LOC111776954 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470.7 bits (1210), Expect = 7.7e-129
Identity = 242/245 (98.78%), Postives = 242/245 (98.78%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
           MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120
           DLKSGKMFIQRCNVQDF NNNHQ NQTVPKLQDLNFPPSPPNYPKF FSTHLMDETNLDL
Sbjct: 61  DLKSGKMFIQRCNVQDF-NNNHQTNQTVPKLQDLNFPPSPPNYPKFHFSTHLMDETNLDL 120

Query: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180
           KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS
Sbjct: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180

Query: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240
           SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID
Sbjct: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240

Query: 241 LNISI 246
           LNISI
Sbjct: 241 LNISI 244

[Close]

BLAST of CmoCh20G003000 vs. NCBI nr
Match: XP_022986073.1 (uncharacterized protein LOC111483930 [Cucurbita maxima])

HSP 1 Score: 458.4 bits (1178), Expect = 4.0e-125
Identity = 237/245 (96.73%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
           MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1   MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61  DLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTHLMDETNLDL 120
           DLKSGKMFIQRCNVQDF NNNHQ NQTVPKLQDLNFPPSPPNY KF FSTHLMDE NLDL
Sbjct: 61  DLKSGKMFIQRCNVQDF-NNNHQTNQTVPKLQDLNFPPSPPNYSKFHFSTHLMDEANLDL 120

Query: 121 KLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180
           KLVSSPSQSP Q TNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS
Sbjct: 121 KLVSSPSQSPWQTTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSS 180

Query: 181 SSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240
           SSAA KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID
Sbjct: 181 SSAAAKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRID 240

Query: 241 LNISI 246
           LNISI
Sbjct: 241 LNISI 244

[Close]

BLAST of CmoCh20G003000 vs. NCBI nr
Match: XP_008456306.1 (PREDICTED: uncharacterized protein LOC103496294 [Cucumis melo] >KAA0054671.1 putative YUP8H12R.23 protein [Cucumis melo var. makuwa] >TYK08600.1 putative YUP8H12R.23 protein [Cucumis melo var. makuwa])

HSP 1 Score: 362.5 bits (929), Expect = 3.0e-96
Identity = 206/258 (79.84%), Postives = 218/258 (84.50%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNK----AAAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
           MAAEVSSLVRVLT+YNK      AGN+S  EKL  LITRDLL+GG     ESQELDLDLH
Sbjct: 1   MAAEVSSLVRVLTTYNKEDRHLTAGNESTAEKLAPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61  VPSGWEKRLDLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTH 120
           VPSGWE+RLDLKSGKMFIQRCNVQDFNNN    NQTVPKLQDLNFPPS PNY KF+ + H
Sbjct: 61  VPSGWERRLDLKSGKMFIQRCNVQDFNNN----NQTVPKLQDLNFPPS-PNYSKFQLTNH 120

Query: 121 LMDETNLDLKLVSSPSQSPSQ---RTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSP 180
           L+DET+LDLKLVSS S SPS    R+NYQSVCTLDKVKSALERAERNPIRKRSSLWKS  
Sbjct: 121 LVDETSLDLKLVSSLSSSPSSSSPRSNYQSVCTLDKVKSALERAERNPIRKRSSLWKS-- 180

Query: 181 SVSPSPSYSSSSSSAAG-KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSS 240
             SPSPSYSSSSSSAA  KEF+EE  LK  SS+PI AGCPGCLSYVLVMKNNPTCPRCSS
Sbjct: 181 --SPSPSYSSSSSSAAADKEFREEEKLK-CSSSPIAAGCPGCLSYVLVMKNNPTCPRCSS 240

Query: 241 VVPLPAAKKPRIDLNISI 246
           +VPLPAAKKPRIDLNISI
Sbjct: 241 IVPLPAAKKPRIDLNISI 248

[Close]

BLAST of CmoCh20G003000 vs. NCBI nr
Match: XP_004140015.1 (uncharacterized protein LOC101202760 [Cucumis sativus] >KGN46805.1 hypothetical protein Csa_021089 [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 3.3e-95
Identity = 205/258 (79.46%), Postives = 217/258 (84.11%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSYNK----AAAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
           MAAEVSSLVRVLT+YNK       G++S  EKLT LITRDLL+GG     ESQELDLDLH
Sbjct: 1   MAAEVSSLVRVLTTYNKEDRHRTGGDESTAEKLTPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61  VPSGWEKRLDLKSGKMFIQRCNVQDFNNNNHQMNQTVPKLQDLNFPPSPPNYPKFRFSTH 120
           VPSGWE+RLDLKSGKMFIQRCNVQDFNNN    NQTVPKLQDLNFPPS PN  KF+ + H
Sbjct: 61  VPSGWERRLDLKSGKMFIQRCNVQDFNNN----NQTVPKLQDLNFPPS-PNCSKFQLTNH 120

Query: 121 LMDETNLDLKLVSSPSQSPSQ---RTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSP 180
           L+DET+LDLKLVSS S SPS    R+NYQSVCTLDKVKSALERAERNPIRKRSSLWKS  
Sbjct: 121 LVDETSLDLKLVSSLSSSPSSSSPRSNYQSVCTLDKVKSALERAERNPIRKRSSLWKS-- 180

Query: 181 SVSPSPSYSSSSSSAAG-KEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSS 240
             SPSPSYSSSSSSAA  KEF+EE NLK LSS PI AGCPGCLSYVLVMKNNPTCPRCSS
Sbjct: 181 --SPSPSYSSSSSSAAAEKEFREEENLKCLSS-PIAAGCPGCLSYVLVMKNNPTCPRCSS 240

Query: 241 VVPLPAAKKPRIDLNISI 246
           +VPLPA KKPRIDLNISI
Sbjct: 241 IVPLPAVKKPRIDLNISI 248

[Close]

BLAST of CmoCh20G003000 vs. TAIR 10
Match: AT1G79160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.9 bits (507), Expect = 2.4e-51
Identity = 126/258 (48.84%), Postives = 159/258 (61.63%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSY--NKAAAGNDSGTEKLTTLITRDLLSGG------ESQELDLDLHV 60
           MAA+VSSLVR+L+ Y  ++A   + +G +    L+TRDLL  G       S ELDLDL V
Sbjct: 5   MAADVSSLVRLLSGYKDDRAVVKDSAGAKSSAALMTRDLLGNGRGGGGDRSLELDLDLQV 64

Query: 61  PSGWEKRLDLKSGKMFIQRCNVQDFNN--NNHQMNQTVPKLQDLNFPPSPPNYPKFRFST 120
           P+G+EKRLDLKSGK+++QRCN    ++  N  Q NQTVP  QDLNFPP   N        
Sbjct: 65  PTGYEKRLDLKSGKVYLQRCNSTSSSSITNADQTNQTVPTFQDLNFPPPTLNNSPL---L 124

Query: 121 HLMDETNLDLKLVSSPSQSPSQRTNYQSVCTLDKVKSALERAERNPIRKRSSLWKSSPSV 180
           +L D+T  +LKL+ S   S    +N QSVCTLDKVKSALERAER+P   +    + SP  
Sbjct: 125 NLFDDTTPELKLLPSSRSSRPNTSNLQSVCTLDKVKSALERAERDPAMFKK---RQSPDD 184

Query: 181 SPSPSYSSSSSSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVP 240
           +    Y + +                  ++P+VAGCPGCLSYVLVM NNP CPRC ++VP
Sbjct: 185 TVYDHYRTEA-----------------VASPVVAGCPGCLSYVLVMMNNPKCPRCDTIVP 239

Query: 241 LPA---AKKPRIDLNISI 246
           LP     KKP+IDLNISI
Sbjct: 245 LPTNPMKKKPKIDLNISI 239

[Close]

BLAST of CmoCh20G003000 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 178.7 bits (452), Expect = 5.6e-45
Identity = 122/280 (43.57%), Postives = 162/280 (57.86%), Query Frame = 0


Query: 1   MAAEVSSLVRVLTSY--NKAAAGNDSGTEKLTTLITRDLL---------SGGESQ--ELD 60
           MAA+VSSLVR+L+ +  ++    + +G      L+TRDLL          GG+ Q  ELD
Sbjct: 1   MAADVSSLVRILSRFKDDRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLELD 60

Query: 61  LDLHVPSGWEKRLDLKSGKMFI-QRCNVQDFNNNNH--------QMNQTVPKLQDLNFPP 120
           LD+ VP+GWEKRLDLKSGK+++ Q+CN    ++++H        Q NQTVP+ QDLN PP
Sbjct: 61  LDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQDLNVPP 120

Query: 121 SPPNYPKFRFSTHL--MDETNLDLKLVSS----------PSQSPSQRTNY-QSVCTLDKV 180
               +P     +     D+T+L+LKLV S           S SP+Q  +Y  SVCTLDKV
Sbjct: 121 ISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKV 180

Query: 181 KSALERAERNPIRKRSSLWKSSPSVSPSPSYSSSSSSAAGKEFQEEPNLKHLSSTPIVAG 240
           K ALERAE++         K   S      Y  ++S+              ++++ + AG
Sbjct: 181 KLALERAEKDT--------KKRQSPEDDGVYDGTASAT-------------VAASQVAAG 240

Query: 241 CPGCLSYVLVMKNNPTCPRCSSVVPLPAAKKPRIDLNISI 246
           CPGCLSYV V KNNP CPRC S VPLPA KKP+IDLNIS+
Sbjct: 241 CPGCLSYVFVAKNNPKCPRCHSFVPLPAMKKPKIDLNISM 259

[Close]

BLAST of CmoCh20G003000 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 2.6e-05
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 167 SPSVSPSPSYSSSSSSAAGKEF-QEEPNLKHLSS----TPIVAGCPGCLSYVLVMKNNPT 226
           SPS S + S +S  SS    E  Q+EP++++ +S    + ++ GCP CL YV++ +++P 
Sbjct: 27  SPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPK 86

Query: 227 CPRCSSVVPL 232
           CP+C S V L
Sbjct: 87  CPKCKSTVLL 96

[Close]

BLAST of CmoCh20G003000 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.8e-04
Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 171 SPSPSYSSSSSSAAGKEFQEEPNLKHLSSTPIVAGCPGCLSYVLVMKNNPTCPRCSSVVP 230
           SP+ S ++S SS    E  +E N     ++ ++ GCP CL YV++  ++P CP+C S V 
Sbjct: 32  SPNRSNTTSPSSCVSSETNQEEN--ETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVL 90

Query: 231 L 232
           L
Sbjct: 92  L 90

The following BLAST results are available for this feature:

BLAST of CmoCh20G003000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	3.6e-04	38.57	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]

BLAST of CmoCh20G003000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXV9	2.1e-132	100.00	uncharacterized protein LOC111448249 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A6J1JFF5	1.9e-125	96.73	uncharacterized protein LOC111483930 OS=Cucurbita maxima OX=3661 GN=LOC111483930...	[more]
A0A5D3CB81	1.4e-96	79.84	Putative YUP8H12R.23 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C2I3	1.4e-96	79.84	uncharacterized protein LOC103496294 OS=Cucumis melo OX=3656 GN=LOC103496294 PE=...	[more]
A0A0A0KAN5	1.6e-95	79.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137580 PE=4 SV=1	[more]

BLAST of CmoCh20G003000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943495.1	4.4e-132	100.00	uncharacterized protein LOC111448249 [Cucurbita moschata] >KAG6570588.1 hypothet...	[more]
XP_023512147.1	7.7e-129	98.78	uncharacterized protein LOC111776954 [Cucurbita pepo subsp. pepo]	[more]
XP_022986073.1	4.0e-125	96.73	uncharacterized protein LOC111483930 [Cucurbita maxima]	[more]
XP_008456306.1	3.0e-96	79.84	PREDICTED: uncharacterized protein LOC103496294 [Cucumis melo] >KAA0054671.1 put...	[more]
XP_004140015.1	3.3e-95	79.46	uncharacterized protein LOC101202760 [Cucumis sativus] >KGN46805.1 hypothetical ...	[more]

BLAST of CmoCh20G003000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79160.1	2.4e-51	48.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16500.1	5.6e-45	43.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06270.1	2.6e-05	38.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	2.8e-04	37.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..187
None	No IPR available	PANTHER	PTHR33177:SF24	FILAMENTOUS HEMAGGLUTININ TRANSPORTER	coord: 1..244
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G003000.1	CmoCh20G003000.1	mRNA