CmoCh20G002960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G002960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Interactor of constitutive active ROPs 2
Location	Cmo_Chr20: 1440303 .. 1445279 (-)
RNA-Seq Expression	CmoCh20G002960
Synteny	CmoCh20G002960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCAGAGCAATGGGCCTGATTTCAACCTACCTGATGAGATTTTGGCGGTGATTCCAACGGATCCATACGATCAGCTCGATCTTGCGCGAAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCAGACATGGTAAGGATGAAGCAAAAGCTTAACGAGAAGGAAATAACCATCTACGACCTGCAGAAGAAGTTGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATCGCGCTTGATGATAATGTAAGCGGCACACTGTTCGCTATTGAGATTGACCAAACAATTTATCCGTTTTTGCTCAAATTCAATGGCTCTTGATTCTGCAGCATCTCAATTCTCCACGAAGGCAAATGGCTGATAGCTCAGTACTTTGCTTTTGATTGACGATTCAAGAAAAGGCCAAAATATTCCGAATTATCCTCTTAATCTCTGCACTAAGGAACATAAACTAGTTCTTGGGTTTTATATAATCTTTGTGCTTCTCCTTAATTGAGCAGTTTCTTGAACTTGGTTCCCCATGCCGTAGAATATCTAATTAGTTATTTCTTTGTGTGGGGGTTTATCATTAAATCAGTAGAGTATTACTTTCTTTTAAGAATGAACAAAGTGGTGATTGTTTTGATAGACTCTTGAGCCTAATTTTCTGGTTCCTCATTGAAGCATATTTGACCTTTTGTTTTTTGTTTTATGAAGACGAGGCTTTCCATGGAAAGGGATGCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGGTGAGATTGTGGTCACTCTTTCTTATGCAGAAACAAGTTAGCTTTATTCCTCTGCCTGTTTTACCTCTCTGTTGCTGTCAAGCTTGACACTTTTGTAGTATTGAGATTTGGCTACTAGTTAAACTTCGAGTGAAATAGCTGCTTTATGGTGCGAACTGAAAGGATATCCATCTTCTATTGCTCATAGTCTAAGATAAGAGCTAGCATGTGGGCCAGTTGTGGCATGTGGGGTCTCTTGAACTTAAATATCTGCCTGGCTTCTGGACTGGAAGGAAAAATACCTTAGGATATAAATCTCTGAGATAAGTTCATCACTTTTTCTTTTTTTAATGAGAAATATAAAGTTGGCATCATTTTCTTGATTTCTTTCCCTCTTATGGGAGTTCGGTCAGAGGGTCTTGGGAAGTTGGGTCAGAGTAATTTTAACGGCCTAAGCCCACTGGTAACAGATATTGTCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAAGTTTTCACACTCTTATAAAAAAATGTTTCATTCTCCTCCCCAATCGACGTGGACTTACAATCCACCCTTCTTCGAGGCCCAACGTCCTCGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCTCCAATCCACCCCCTTCGGAGATGAGCATTCTTGTTGACACACTGCTTTGTGTTCACCCCTTTCGGGGCTCAGCCTCCTCACTGGCACATTGCCCAGTGTCTGCTATGACCATTTGTAATAGCTCAAGCCCACCGCTAGCAGATATTGTCCATTTTAGGCTTTCCCTCAAGGTTTTTAAAACGCATCTACTAGAGAGAGGTTTTCACACCCTTACAAAGAATTTTTTGTTCTCCTCCCCAATCGATGTAGATCTCACAGTAATAAAACAAAAGAGGATAAATTGGCTTTGTGCACCTTTAGTTAGAATAGAGTTCGTGTACCTATTCTACCGTGTCTTTAAATTAGTACTCTTACTCTTTTCAGTTGATTGTAATCACCTCTTATGTTATTTTATATAATTTTTGGCATATGAGACGAGTGCTTCAGTTCATGAGATTTCATACTTTGTTGTGAACCTGGTGTCTTTCATACTGCAGCTGGAGACGTTTAAGCGACAACTTATGCTATCATTGAATGATGAATCCTCCGTAAGGTTTCCGGTCCATAAATTTTACCAGTTATGATATGCTTGGCATAATACATATTTCTTAGTGTATAAGTTCTCCTGTGATGTCTTCTTTTTTCCAGCAAACAGAAACTGTTGATATTGGGACCTGTGATCAAGCAGTTCCTAAAGCATATACTGATAAGGGTATTATAGAATTTCTTGATCTTAGTTTATATCTGTGATATGTTCGGTGTTCAATTGGACTTAACTTTCACCTGGACTTCAGATGAGGTAACTGATGGACACGCCACACGTTCTTTCAGTGGTTCTACGGAGACGAGAAACACAATAGATGAAGGTATTATTTGTTACCCTGTTCAATGCAAAGGATAGAAGATAAGGAACTGATAATAATTAGATTATAAACATAAATACTATATTCATATCTTAAAACCATGCATTAATTGAAATCCTGGAGAATGTCATTTTTGTTGCCAGTTGGTTTTCAAAGAATCCTCTTCAATTAATGGTCGATAAATTAAGCACTAATGGCGAAGTTTCATCTCCAACAGGAAAACATCTTGGACAAAGATTTTCATCGCTGCATATCACCCCAAGGTTCACTCCATCTGCGACTCCAAAAACTACTTCAAAGAGTGTATCCCCCAGAGGGTATTCCTCCGTTGCTTCGCCACAGATAACATCTGGTTCAACTTCTCCAACAAAAGTCTCATATGATGGACAAATCGCACCATCTCCATGGTACCCGTCAAGCCAGCAATCGTCTGCAGCAAGTTCTCCTCCTCGTTCTCGTCCACTGGCCGGTAAAAGAAATGTTATCATTTTTTTCCTCTCTTTTTTGAAGATTAAGACGTTCTTGAACGTTTTGAAGCATGTTCTGTCATTTTATATTTTCTTGTTTATTTTGATGTGGATTTTCCAGCTATCTATTGCTGCAAACATTTAAATTTAGATGCTCCCTTGGGGGTAAAGATTTCAGCTACTTCCGTGCCTGTTTGAATTACGATTTTCTGTTTAATCTTTTGCACTTAAATTCTGCAGGTCGCCCTGCTCGAGTCGATGGCAAGGAATTTTTCCGCCTTGCTAGGTTTGTTTTTATATTCCACTGGAACTATGTGATCAATGAATCTAGACTGAAAAGAACATGTTGACTGATGAATTTGTAAATTATTCCAGGAGTCGTCTGTCATACGAGCAGTTTAGTGCCTTCCTTTCAAACATAAAAGAACTCAATTCTCAAAAGCAGACTAGAGAGGTAGATTCATCAGTATTTAACAGTTTGCTAAGAACTTTCATATCTTGGGACCTTTTTTGTTCACTAGTATATGGTTTCAATTGCCCTTTGCTTCCAGGAAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTCTGTCATTTCAAGGATTGCTTAACCGCAATATTCACTAGGCCTCTCTCTAGTAGATATTGTTTACAATCACACATGATCTCTCCTAATAGATTATTAGAGAGAAAATTCACAATGTTTGTTCTCAACGGCTGCTTGCTCGCTCTGAAGACGTATGTATGCTGCATGCAGGCTCACACTCGCAATGTTTTTGTAAAATATCAAACCTCTTGTAGTTGAAACTTCTTTTTCTATGGAAATATTGACTTTGGTTTTTAGAAAAGTGAAAGAAACAAAGAAAAAAAAAAGAAAGGAAATGGAAAAACCTGTTGAGTTATGTACCTCCACCATGTGCTATGTCTCTGTGACAACTCTATTTGGGAAAAGTATTACTTCCAGAACTCAAAGGCTGTGTGCTGTCAAGTTTGCATTTAAAGGAGGGAAGTCAGTGCGATCTGATTGAAAGAAACTAACTTATTTATGATGAAAAGTTCAGCCTTTCACTAATATTATTTGTGAAATATCAGGGGATGATAGCTTGCAGGAGAACCCAGAAAAGTGATCATCTCAGATGCTCCATAATCAGCGTACGTTCACTTGGGCTACATTGATATGAAACTCTGAATCATTAGATGGCGACTCAGTGGGTAAACCTCAGGTAAAAGTAGTGATTCTTTCTGCCAAGAAAACTAATGGGAATCATTCTGGTTTTCACTTCTCTTTTTTGGGTTATATTCATTGGTTTCTATTTCACAAGTTCCCTATATTTTGGTACTTCTCATTTCAATTTAGTTTCAATTTAGTTTAGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTACACTTTGAGCGTAAGCTCTCATGGCTTTGCTTTGGGCTTCCTCAAAAGGTCTCATGCCAATGAAGATGTATTCCTTACATCCTCCCAACAATCCTCCTCGAACAAAGTACACTATAGAGTCTCTCCTGAGGCTTATGGAGCCCTCGAACAGCCTCCCCTTAATCAAGGCTCGACTCCTTCTCTAGAGTCCTCGAACAAAGTACACCTTTTGTTCGACACTTGAGTCACTTTTAACTACACTTTCGAGGCTCACAACCATTTTGTTCGACATTTGAGGATTCTATTGACATGGTTAAGTTAAGGGCATGACTTTGATACCATGTTAGGAATCATGGCTCTCCACAATAGTATGATACTGTCTACTTTGAGCATAAGCTCTCATGGCTTTGTTTTGGGGTTCCCCAAAAAGTCTCATGTCAATGGAGATGTATTATTCCTTACATCTTCCCAACAATCCACAATCCTCAATTTGCAGGTGAAGTAACCCCATAATTGCCTCCAACTTCTCCATTTGAGTTTCAAACACCATATTCCCCAAAACCCATGCCCATTTGTACTGGAACTAACAGAGCCCACATCTCATAACACAATAGAAAGCTTTTGAAACTGCATAATAAGGCCAAAATGTACACGCCCTTTTCCTTTTCTGAAATCCCCTTTCCCCAATTGAAGTGAAGGGTTGATGGTACAACAGGGGGTGCGTAGGGGACCGAAACATTAGGGGCAGTCAGCAGATAGGGAGACTCAGGCAAGAAGAAAGAAGAAGAGATATTGATTTGTAGAATGATGGGATGGAAATTGGAAAAGGGTTATTAG

mRNA sequence

ATGTCGCAGAGCAATGGGCCTGATTTCAACCTACCTGATGAGATTTTGGCGGTGATTCCAACGGATCCATACGATCAGCTCGATCTTGCGCGAAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCAGACATGGTAAGGATGAAGCAAAAGCTTAACGAGAAGGAAATAACCATCTACGACCTGCAGAAGAAGTTGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATCGCGCTTGATGATAATACGAGGCTTTCCATGGAAAGGGATGCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGAATCCTCTTCAATTAATGGTCGATAAATTAAGCACTAATGGCGAAGTTTCATCTCCAACAGGAAAACATCTTGGACAAAGATTTTCATCGCTGCATATCACCCCAAGGTTCACTCCATCTGCGACTCCAAAAACTACTTCAAAGAGTGTATCCCCCAGAGGGTATTCCTCCGTTGCTTCGCCACAGATAACATCTGGTTCAACTTCTCCAACAAAAGTCTCATATGATGGACAAATCGCACCATCTCCATGGTACCCGTCAAGCCAGCAATCGTCTGCAGCAAGTTCTCCTCCTCGTTCTCGTCCACTGGCCGGTCGCCCTGCTCGAGTCGATGGCAAGGAATTTTTCCGCCTTGCTAGAATGATGGGATGGAAATTGGAAAAGGGTTATTAG

Coding sequence (CDS)

ATGTCGCAGAGCAATGGGCCTGATTTCAACCTACCTGATGAGATTTTGGCGGTGATTCCAACGGATCCATACGATCAGCTCGATCTTGCGCGAAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCAGACATGGTAAGGATGAAGCAAAAGCTTAACGAGAAGGAAATAACCATCTACGACCTGCAGAAGAAGTTGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATCGCGCTTGATGATAATACGAGGCTTTCCATGGAAAGGGATGCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGAATCCTCTTCAATTAATGGTCGATAAATTAAGCACTAATGGCGAAGTTTCATCTCCAACAGGAAAACATCTTGGACAAAGATTTTCATCGCTGCATATCACCCCAAGGTTCACTCCATCTGCGACTCCAAAAACTACTTCAAAGAGTGTATCCCCCAGAGGGTATTCCTCCGTTGCTTCGCCACAGATAACATCTGGTTCAACTTCTCCAACAAAAGTCTCATATGATGGACAAATCGCACCATCTCCATGGTACCCGTCAAGCCAGCAATCGTCTGCAGCAAGTTCTCCTCCTCGTTCTCGTCCACTGGCCGGTCGCCCTGCTCGAGTCGATGGCAAGGAATTTTTCCGCCTTGCTAGAATGATGGGATGGAAATTGGAAAAGGGTTATTAG

Protein sequence

MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKEITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLMVDKLSTNGEVSSPTGKHLGQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPWYPSSQQSSAASSPPRSRPLAGRPARVDGKEFFRLARMMGWKLEKGY

Homology

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BLAST of CmoCh20G002960 vs. ExPASy Swiss-Prot
Match: Q93W28 (Uncharacterized protein At4g15545 OS=Arabidopsis thaliana OX=3702 GN=At4g15545 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-16
Identity = 85/274 (31.02%), Postives = 125/274 (45.62%), Query Frame = 0


Query: 9   FNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKEITIYDLQK 68
           F+LPDE+L V+P+DP++QLD+ARKITS+A+++RVS LE++   +++ L EKE    +LQ 
Sbjct: 22  FDLPDELLQVLPSDPFEQLDVARKITSIALSTRVSALESESSDLRELLAEKEKEFEELQS 81

Query: 69  KLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK---------NPLQL 128
            +  LE +  +A  +L +A  +   L  E  +LS T K+L RD++K           LQ 
Sbjct: 82  HVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQRDVSKLEGFRKTLMMSLQD 141

Query: 129 MVDKLSTNGEVSSPTGK-----HLGQRFSSLH---------------------------- 188
                 T   ++ PT           R SS+                             
Sbjct: 142 DDQNAGTTQIIAKPTPNDDDTPFQPSRHSSIQSQQASEAIEPAATDNENDAPKPSLSASL 201

Query: 189 ------ITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPWYP 235
                  TPR TP  +P   S S +P+  S   SP+  S S + T+  +D          
Sbjct: 202 PLVSQTTTPRLTPPGSPPILSASGTPKTTSRPISPRRHSVSFATTRGMFD---------- 261

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BLAST of CmoCh20G002960 vs. ExPASy TrEMBL
Match: A0A6J1FY13 (uncharacterized protein At4g15545-like OS=Cucurbita moschata OX=3662 GN=LOC111448330 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.8e-103
Identity = 219/276 (79.35%), Postives = 219/276 (79.35%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
           ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 120

Query: 121 VDKLSTNGEVSS------------------------------------------PTGKHL 180
              LS N E S                                             GKHL
Sbjct: 121 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFSGSTETRNTIDEGKHL 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW
Sbjct: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 240

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BLAST of CmoCh20G002960 vs. ExPASy TrEMBL
Match: A0A6J1JCV1 (uncharacterized protein At4g15545-like OS=Cucurbita maxima OX=3661 GN=LOC111483869 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.3e-101
Identity = 216/276 (78.26%), Postives = 218/276 (78.99%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
           ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 120

Query: 121 VDKLSTNGEVSS------------------------------------------PTGKHL 180
              LS N E S                                             GKHL
Sbjct: 121 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFSGSTETRNTIDEGKHL 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTK+SYDG+IA SPW
Sbjct: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKLSYDGRIALSPW 240

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BLAST of CmoCh20G002960 vs. ExPASy TrEMBL
Match: A0A0A0KAP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G138120 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 9.9e-90
Identity = 197/276 (71.38%), Postives = 212/276 (76.81%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQS+GPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEA+M+RMKQKL EKE
Sbjct: 1   MSQSSGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEAEMIRMKQKLKEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK------ 120
            TIYDLQ+K+SHLEHANQEAESRLKIALDDNTRLS ERD+LSMTSKKLGRDLAK      
Sbjct: 61  KTIYDLQEKMSHLEHANQEAESRLKIALDDNTRLSRERDSLSMTSKKLGRDLAKLETFKR 120

Query: 121 NPLQLMVDKLS------------------------TNGEVSSP------------TGKHL 180
             +Q + D+ S                        TNG  +               GKH+
Sbjct: 121 QLMQSLSDESSQTETVDIGTCDQAVPKAYTDKDEVTNGHATHSFGGSTETRSTIVEGKHI 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSS +ITPR TPSATPK  S SVSPRGYS+VASPQI SGSTSPTK SYDG+IA SPW
Sbjct: 181 GQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQIMSGSTSPTKHSYDGRIALSPW 240

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BLAST of CmoCh20G002960 vs. ExPASy TrEMBL
Match: A0A1S3C2X8 (uncharacterized protein At4g15545 OS=Cucumis melo OX=3656 GN=LOC103496298 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 199/276 (72.10%), Postives = 213/276 (77.17%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQS+GPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEA+M+RMKQKL EKE
Sbjct: 1   MSQSSGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEAEMIRMKQKLKEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPL--- 120
            TIYDLQ+K+SHLEHANQEAE RLKIALDDNTRLS ERD+LSMTSKKLGRDLAK      
Sbjct: 61  KTIYDLQEKMSHLEHANQEAECRLKIALDDNTRLSRERDSLSMTSKKLGRDLAKLETFKR 120

Query: 121 QLMV---DKLS------------------------TNGEVSSP------------TGKHL 180
           QLM+   D+ S                        TNG  +               GKH+
Sbjct: 121 QLMLSLSDESSQTETVDIGTCDQAVPKAYTDKDEVTNGHTTHSFSGSTETRSTIVEGKHI 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSS +ITPR TPSATPK  S SVSPRGYS+VASPQITSGSTSPTK SYDG+IA SPW
Sbjct: 181 GQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQITSGSTSPTKHSYDGRIALSPW 240

[Close]

BLAST of CmoCh20G002960 vs. ExPASy TrEMBL
Match: A0A5D3CBL1 (Interactor of constitutive active ROPs 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00430 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 199/276 (72.10%), Postives = 213/276 (77.17%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQS+GPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEA+M+RMKQKL EKE
Sbjct: 1   MSQSSGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEAEMIRMKQKLKEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPL--- 120
            TIYDLQ+K+SHLEHANQEAE RLKIALDDNTRLS ERD+LSMTSKKLGRDLAK      
Sbjct: 61  KTIYDLQEKMSHLEHANQEAECRLKIALDDNTRLSRERDSLSMTSKKLGRDLAKLETFKR 120

Query: 121 QLMV---DKLS------------------------TNGEVSSP------------TGKHL 180
           QLM+   D+ S                        TNG  +               GKH+
Sbjct: 121 QLMLSLSDESSQTETVDIGTCDQAVPKAYTDKDEVTNGHTTHSFSGSTETRSTIVEGKHI 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSS +ITPR TPSATPK  S SVSPRGYS+VASPQITSGSTSPTK SYDG+IA SPW
Sbjct: 181 GQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQITSGSTSPTKHSYDGRIALSPW 240

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BLAST of CmoCh20G002960 vs. NCBI nr
Match: XP_022943615.1 (uncharacterized protein At4g15545-like [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 1.6e-102
Identity = 219/276 (79.35%), Postives = 219/276 (79.35%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
           ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 120

Query: 121 VDKLSTNGEVSS------------------------------------------PTGKHL 180
              LS N E S                                             GKHL
Sbjct: 121 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFSGSTETRNTIDEGKHL 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW
Sbjct: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 240

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BLAST of CmoCh20G002960 vs. NCBI nr
Match: XP_022986005.1 (uncharacterized protein At4g15545-like [Cucurbita maxima] >XP_022986006.1 uncharacterized protein At4g15545-like [Cucurbita maxima])

HSP 1 Score: 376.7 bits (966), Expect = 1.5e-100
Identity = 216/276 (78.26%), Postives = 218/276 (78.99%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
           ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 120

Query: 121 VDKLSTNGEVSS------------------------------------------PTGKHL 180
              LS N E S                                             GKHL
Sbjct: 121 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFSGSTETRNTIDEGKHL 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTK+SYDG+IA SPW
Sbjct: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKLSYDGRIALSPW 240

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BLAST of CmoCh20G002960 vs. NCBI nr
Match: KAG7010437.1 (Cyclin-T1-5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.6 bits (963), Expect = 3.4e-100
Identity = 215/276 (77.90%), Postives = 217/276 (78.62%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 634 MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 693

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
           ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 694 ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 753

Query: 121 VDKLSTNGEVSS------------------------------------------PTGKHL 180
              LS N E S                                             GKHL
Sbjct: 754 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFSGSTETRNTIDEGKHL 813

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSSLH+TPRFTPSATPKTTSKSVSPRGYSSVASPQITSGS SPTKVSYDG+IA SPW
Sbjct: 814 GQRFSSLHVTPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSASPTKVSYDGRIALSPW 873

[Close]

BLAST of CmoCh20G002960 vs. NCBI nr
Match: KAG6570586.1 (Cyclin-T1-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.8 bits (961), Expect = 5.7e-100
Identity = 215/276 (77.90%), Postives = 217/276 (78.62%), Query Frame = 0


Query: 1    MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
            MSQ+NGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 892  MSQNNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 951

Query: 61   ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
            ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 952  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 1011

Query: 121  VDKLSTNGEVSS------------------------------------------PTGKHL 180
               LS N E S                                             GKHL
Sbjct: 1012 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFSGSTETRNTIDEGKHL 1071

Query: 181  GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
            GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGS SPTKVSYDG+IA SPW
Sbjct: 1072 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSASPTKVSYDGRIALSPW 1131

[Close]

BLAST of CmoCh20G002960 vs. NCBI nr
Match: XP_023511905.1 (uncharacterized protein At4g15545-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511906.1 uncharacterized protein At4g15545-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.3 bits (952), Expect = 6.3e-99
Identity = 214/276 (77.54%), Postives = 216/276 (78.26%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE
Sbjct: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPLQLM 120
           ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK      
Sbjct: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKR 120

Query: 121 VDKLSTNGEVSS------------------------------------------PTGKHL 180
              LS N E S                                             GKHL
Sbjct: 121 QLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFGGSTETRNTIDEGKHL 180

Query: 181 GQRFSSLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPW 235
           GQRFSSLHITPRFTPSATPKT SKSVSPRGYSSVASPQITSGSTSPTK+SYDG+IA SPW
Sbjct: 181 GQRFSSLHITPRFTPSATPKTISKSVSPRGYSSVASPQITSGSTSPTKLSYDGRIALSPW 240

[Close]

BLAST of CmoCh20G002960 vs. TAIR 10
Match: AT1G56080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 196 Blast hits to 193 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 132; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). )

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-51
Identity = 128/260 (49.23%), Postives = 169/260 (65.00%), Query Frame = 0


Query: 1   MSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKE 60
           MSQS G DFNL DEILAVIPTDPYDQLDLARKITSMAIASRVSNLE+ +  ++QKL EK+
Sbjct: 1   MSQSGG-DFNLSDEILAVIPTDPYDQLDLARKITSMAIASRVSNLESQVSGLRQKLLEKD 60

Query: 61  ITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK------ 120
             +++L+ ++S  E    EA+S LK  +D+N +L+ ERD+L++T+KKLGRD AK      
Sbjct: 61  RLVHELEDRVSSFERLYHEADSSLKNVVDENMKLTQERDSLAITAKKLGRDYAKLEAFKR 120

Query: 121 ---------NPLQL------MVDK---LSTNGEVSSPTGKHLGQRFSSL--HITPRFTPS 180
                    NP Q       MV +    ++NG  S+  G    ++  S+    +P FTPS
Sbjct: 121 QLMQSLNDDNPSQTETADVRMVPRGKDENSNGSYSNNEGLSEARQRQSMTPQFSPAFTPS 180

Query: 181 ATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPWYPSSQQSSAASSPPRS 235
            TPK  S + SPR YS+ +SP++ SG+ SPT   YD ++    W  +SQQSS A+SPPRS
Sbjct: 181 GTPKILSTAASPRSYSAASSPKLFSGAASPTSSHYDIRM----WSSTSQQSSVANSPPRS 240

[Close]

BLAST of CmoCh20G002960 vs. TAIR 10
Match: AT1G16520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-51
Identity = 127/271 (46.86%), Postives = 166/271 (61.25%), Query Frame = 0


Query: 8   DFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKEITIYDLQ 67
           DF LP+E+L+VIP DP++QLDLARKITSMAIASRVSNL++++V ++QKL  KE  + +L+
Sbjct: 7   DFELPEEVLSVIPMDPFEQLDLARKITSMAIASRVSNLDSEVVELRQKLLGKESVVRELE 66

Query: 68  KKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKNPL---QLMVDKL 127
           +K S LE   +EA+SRLK+ L+DN  L+ E+D+L+MT  KL RDLAK      QL+    
Sbjct: 67  EKASRLERDCREADSRLKVVLEDNMNLTKEKDSLAMTVTKLTRDLAKLETFKRQLIKSLS 126

Query: 128 STNGEVSSP----------------------------------------TGKHLGQRFS- 187
             +G  + P                                          K+ G +FS 
Sbjct: 127 DESGPQTEPVDIRTCDQPGSYPGKDGRINAHSIKQAYSGSTDTNNPVVEASKYTGNKFSM 186

Query: 188 SLHITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPWYPSSQ 235
           + +I+PR TP+ATPK  S SVSPRGYS+  SP+ TSG+ SPTK +         WYPSSQ
Sbjct: 187 TSYISPRLTPTATPKIISTSVSPRGYSAAGSPKRTSGAVSPTKATL--------WYPSSQ 246

[Close]

BLAST of CmoCh20G002960 vs. TAIR 10
Match: AT4G15545.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-17
Identity = 85/274 (31.02%), Postives = 125/274 (45.62%), Query Frame = 0


Query: 9   FNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKEITIYDLQK 68
           F+LPDE+L V+P+DP++QLD+ARKITS+A+++RVS LE++   +++ L EKE    +LQ 
Sbjct: 22  FDLPDELLQVLPSDPFEQLDVARKITSIALSTRVSALESESSDLRELLAEKEKEFEELQS 81

Query: 69  KLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAK---------NPLQL 128
            +  LE +  +A  +L +A  +   L  E  +LS T K+L RD++K           LQ 
Sbjct: 82  HVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQRDVSKLEGFRKTLMMSLQD 141

Query: 129 MVDKLSTNGEVSSPTGK-----HLGQRFSSLH---------------------------- 188
                 T   ++ PT           R SS+                             
Sbjct: 142 DDQNAGTTQIIAKPTPNDDDTPFQPSRHSSIQSQQASEAIEPAATDNENDAPKPSLSASL 201

Query: 189 ------ITPRFTPSATPKTTSKSVSPRGYSSVASPQITSGSTSPTKVSYDGQIAPSPWYP 235
                  TPR TP  +P   S S +P+  S   SP+  S S + T+  +D          
Sbjct: 202 PLVSQTTTPRLTPPGSPPILSASGTPKTTSRPISPRRHSVSFATTRGMFD---------- 261

The following BLAST results are available for this feature:

BLAST of CmoCh20G002960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W28	7.0e-16	31.02	Uncharacterized protein At4g15545 OS=Arabidopsis thaliana OX=3702 GN=At4g15545 P...	[more]

BLAST of CmoCh20G002960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY13	7.8e-103	79.35	uncharacterized protein At4g15545-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JCV1	7.3e-101	78.26	uncharacterized protein At4g15545-like OS=Cucurbita maxima OX=3661 GN=LOC1114838...	[more]
A0A0A0KAP1	9.9e-90	71.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G138120 PE=4 SV=1	[more]
A0A1S3C2X8	1.7e-89	72.10	uncharacterized protein At4g15545 OS=Cucumis melo OX=3656 GN=LOC103496298 PE=4 S...	[more]
A0A5D3CBL1	1.7e-89	72.10	Interactor of constitutive active ROPs 2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CmoCh20G002960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943615.1	1.6e-102	79.35	uncharacterized protein At4g15545-like [Cucurbita moschata]	[more]
XP_022986005.1	1.5e-100	78.26	uncharacterized protein At4g15545-like [Cucurbita maxima] >XP_022986006.1 unchar...	[more]
KAG7010437.1	3.4e-100	77.90	Cyclin-T1-5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570586.1	5.7e-100	77.90	Cyclin-T1-5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023511905.1	6.3e-99	77.54	uncharacterized protein At4g15545-like isoform X1 [Cucurbita pepo subsp. pepo] >...	[more]

BLAST of CmoCh20G002960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56080.1	1.4e-51	49.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16520.1	1.8e-51	46.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G15545.1	4.9e-17	31.02	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..226
None	No IPR available	PANTHER	PTHR47383	FAMILY NOT NAMED	coord: 140..234
None	No IPR available	PANTHER	PTHR47383:SF1	SUBFAMILY NOT NAMED	coord: 140..234
None	No IPR available	PANTHER	PTHR47383:SF1	SUBFAMILY NOT NAMED	coord: 3..114
None	No IPR available	PANTHER	PTHR47383	FAMILY NOT NAMED	coord: 3..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G002960.1	CmoCh20G002960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane