CmoCh20G002590 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G002590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptiontriacylglycerol lipase 2-like
LocationCmo_Chr20: 1267116 .. 1269910 (+)
RNA-Seq ExpressionCmoCh20G002590
SyntenyCmoCh20G002590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTAAGTTGAAGAGAATTTGGTCGCCGCCCTCCACCCTCTCTCCCCTGTTGTCTGTCGATCCCTACTTTGTTGTTAGACTTATTAGAAGAACTGGGTTCCCTTCGACGACCATGGGCTATATATTGTTGTCAGATCATTGAAGCTTTTTAGCATCGTTTAAGCTGCTGTGTATCTGGGATTTTCGTTTCTTGATCCGATTCACATCATGAAATCCTTACTACTGTACAAATATTTACCCATCTAATTTAAAGAATCTGCAGTGTTCTAATCGCCATGAAACTTTTCTTACCCATCTCTGGTTCTTTTCATATCTATTTGAATTGCATTGTTCAAAGTTTGTTTGATCTGAAAATTTGTTGGAAGACTAGAACATTGAGTGTTCATGCTATTTGGGTTTGCAAATATTGAATTGGGGGAGATGGGCATTTAGGGTTTTTGTTTTTGATAAGAAACATTTATTGGCACATGTGATATGCTCGATTCTGATCTCAATATGCCCAAAACCCAATAGAGGCGGGGGCACCCTTCCCGAGCTTCCCCCCGCTTTAGGCAGAGGCCTTCACCAGCTGCTTTCCTTCCCAATGCCATGTGCTTGCAAACCTAAATGATTCAAAAGGGTTAAAAACTGATTCAAAGGGTTTTGTTTAGCCAATTTCCCTAAAGTTACACGTTTTGTTTGCATCTGTTCATGATTTTCATGGTGGGTTTGGTGTGAACATAATCATATTGGTCTCTCAGGTGAGGATGGTCGGCCCATGCTCGTATAATTTATAGCCATCATCCATCTCTGTTAGCTCTTTTTTTCGTGTTTCCTTTCTTTAGAGGTGAAATATATTGCATTATGAATAGAGTAAATCATAACTTGCTACATTCAACCTTGTATTGTATTATGAGCTTGTGGTTAAATTTGTTATTTAATATAGAAAAATGAAGAGGAGTGAAAAATTGAACAAAATCTTTGAGATTGATTTGAAAGGAAGGCCCAGCCAATGACTATCAGGCAGGTGGTATGATTTTCTTCACTTTTCCTTTTTCTTTACTTTGAAACCTCTCGATTTTAGCAATTATGATCACTTGTTCTAATATAACTAATATGATTGTCGTAAGAAATTTGGACTTTGTGGACAACATTGGCATATGTTCAAGTTTAGGGTCATGTTTGTGAGAAGTGCTTTAGAAAACGTGAGCGAGTAAATGCGTTGAAAATGAGTAGGTAATCGGGTATGAAGAATTGATAACTAATCATGTCCCACACCCTCGTATTGACACAACAATAACAATAAAGACCTATCTAATATGAAAGTAAGTAAAAGAGAGTTTGTAACGGATATGTAATCATAGATAACATGGCTGAAGCATCTATCGCGCTTTGGTCAAATATAACCGTGACACATGGGCGATGGCGGGTGGTGCTTTCCATCTTTCCTTCAAAGCCACACCAATGATTCCGCTCTCTCTTCCATCCACCAATTTGTTTCAATTCTGACTGTTTGGTGACCATTCTTCCTACCACCTAACTATGTTATCCTTCTCATTCTTCTTTTTCTTTTCTTTTGGATTTTATATTGTCTTTCAACTCTCTTTCTCAATTTTGAATTTTGAATTTAGTTTTAAAATATTATTTGAGGTTAGTGTATAATTAATTTTTTTTAAAAATACTCTTGAATTTTGATTTTTTTTAAATACCTTTTAATTTTAAAATACAAGTTTCATTAATACTCTTAAACTTATAATAATAATAATAATAATAATAATAATAAATATCTTTACCGATAGTACCACGTTTCAAAAATACTCAAATTTTCAAAAGTAACATAAAAAAATTTTGGATATACCTATGAGGTGCCAATAAAGAGTTTTCATTTATATATTGATAATAAGAATTCTTTTGAACGTTTTTAAGGTAAAAATGTTACTGCTACTTTTAAAATTTAATGGGCGTTTTTTAAACATAATACTAATGGTAAAGATATTTTTTATTTTTTATTTTTGAAAGTTTAAGAGTATTTTCGAAAAAGGTGATTTAATCCAAAACTAGCATAAAAGTAATTTTTAGATTTTTTTTTTAAAGTTAAAAGATATTTTTCAGACTTTTGAAAATTTAGGGTCGTTTTTAGATTAAATACAAAGTTTAAACATATTCTTTATCTATTTACCCTTAATTTGATGTATAATAGGTTTCTTAAGTTCGAAAAGACGGCCAATTATAATTTAGGGTATTAATTTGGCATAAGTAGGTTACGTTAATGGTGCCTAAACTTTAAATAGTATATTAAAAATTTGTAGATTTATTATATATAAAATCAAAAATTTAAAAACTTATTATAAATTAAATTGGAATTTTAAAATAATTTATATGTTTAAAGATTAAAATTTTAATTTAACCTTGCTATTTGGCCCAAAACTTCAACAAGTTTCAACTTTTGGCAGACCGGGAATTGGTTACTTGTAGAGGAAGAAAGAAAGCATTGGAGCATCGAAGTCTCCTCGAATTATTGGGAGGAAATCGTCAAAATCCTGAGTATTCAATCTGGAAATCAAATCTCGACCACTATGCAGAGAATAAAGGCCTCAGGAATTTCGATTGTAAGCTCGATTTCAGCAGCTAGGTTGAAGAGGAAGGCCGTCAATTCATGGACGGCCGTTCAGGATACTTTCTATTCCACCAAGGTGACTGAATTTTCGGATTTTGATTTCGGTATTGTTTGTAGGTTATAGAAACTCGGTATTCTGGATGCTGTTTGAAGTATAATCGTTTTCATCGAGCGTTTCTGTTTAATTGTATCTGA

mRNA sequence

ATGGTGACCGGGAATTGGTTACTTGTAGAGGAAGAAAGAAAGCATTGGAGCATCGAAGTCTCCTCGAATTATTGGGAGGAAATCGTCAAAATCCTGAGTATTCAATCTGGAAATCAAATCTCGACCACTATGCAGAGAATAAAGGCCTCAGGAATTTCGATTGTAAGCTCGATTTCAGCAGCTAGGTTGAAGAGGAAGGCCGTCAATTCATGGACGGCCGTTCAGGATACTTTCTATTCCACCAAGGTGACTGAATTTTCGGATTTTGATTTCGGTATTGTTATAGAAACTCGGTATTCTGGATGCTGTTTGAAGTATAATCGTTTTCATCGAGCGTTTCTGTTTAATTGTATCTGA

Coding sequence (CDS)

ATGGTGACCGGGAATTGGTTACTTGTAGAGGAAGAAAGAAAGCATTGGAGCATCGAAGTCTCCTCGAATTATTGGGAGGAAATCGTCAAAATCCTGAGTATTCAATCTGGAAATCAAATCTCGACCACTATGCAGAGAATAAAGGCCTCAGGAATTTCGATTGTAAGCTCGATTTCAGCAGCTAGGTTGAAGAGGAAGGCCGTCAATTCATGGACGGCCGTTCAGGATACTTTCTATTCCACCAAGGTGACTGAATTTTCGGATTTTGATTTCGGTATTGTTATAGAAACTCGGTATTCTGGATGCTGTTTGAAGTATAATCGTTTTCATCGAGCGTTTCTGTTTAATTGTATCTGA

Protein sequence

MVTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAARLKRKAVNSWTAVQDTFYSTKVTEFSDFDFGIVIETRYSGCCLKYNRFHRAFLFNCI
Homology
[Close]
BLAST of CmoCh20G002590 vs. ExPASy TrEMBL
Match: A0A6J1FUK9 (uncharacterized protein LOC111448941 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448941 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.4e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 2  VTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAA 61
          VTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAA
Sbjct: 6  VTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAA 65

Query: 62 RLKRKAVNSWTAVQDTFYSTK 83
          RLKRKAVNSWTAVQDTFYSTK
Sbjct: 66 RLKRKAVNSWTAVQDTFYSTK 86

[Close]
BLAST of CmoCh20G002590 vs. ExPASy TrEMBL
Match: A0A6J1FY40 (uncharacterized protein LOC111448941 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448941 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 3  TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR 62
          TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR
Sbjct: 6  TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR 65

Query: 63 LKRKAVNSWTAVQDTFYSTK 83
          LKRKAVNSWTAVQDTFYSTK
Sbjct: 66 LKRKAVNSWTAVQDTFYSTK 85

[Close]
BLAST of CmoCh20G002590 vs. ExPASy TrEMBL
Match: A0A0A0KGZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168230 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.2e-09
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 44 MQRIKASGISIVSSISAARLKRKAVNSWTAVQDTFYSTK 83
          MQR++ASG SIVSSISAARLKRKAVNSWTAVQDTFYSTK
Sbjct: 1  MQRLRASGTSIVSSISAARLKRKAVNSWTAVQDTFYSTK 39

[Close]
BLAST of CmoCh20G002590 vs. ExPASy TrEMBL
Match: A0A6J1JEZ3 (uncharacterized protein LOC111483894 OS=Cucurbita maxima OX=3661 GN=LOC111483894 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 44 MQRIKASGISIVSSISAARLKRKAVNSWTAVQDTFYSTK 83
          MQR+KASG SIVSSISAA LKRKAVNSWTAVQDTFYSTK
Sbjct: 1  MQRLKASGTSIVSSISAASLKRKAVNSWTAVQDTFYSTK 39

[Close]
BLAST of CmoCh20G002590 vs. ExPASy TrEMBL
Match: A0A1S3C2Q6 (uncharacterized protein LOC103496349 OS=Cucumis melo OX=3656 GN=LOC103496349 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.7e-08
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 44 MQRIKASGISIVSSISAARLKRKAVNSWTAVQDTFYSTK 83
          MQR+KASG SIVSSISAA LKRKAVNSWTAVQDTFYSTK
Sbjct: 1  MQRLKASGTSIVSSISAAGLKRKAVNSWTAVQDTFYSTK 39

[Close]
BLAST of CmoCh20G002590 vs. NCBI nr
Match: XP_022944501.1 (uncharacterized protein LOC111448941 isoform X1 [Cucurbita moschata] >XP_022944502.1 uncharacterized protein LOC111448941 isoform X1 [Cucurbita moschata])

HSP 1 Score: 157.1 bits (396), Expect = 9.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 2  VTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAA 61
          VTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAA
Sbjct: 6  VTGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAA 65

Query: 62 RLKRKAVNSWTAVQDTFYSTK 83
          RLKRKAVNSWTAVQDTFYSTK
Sbjct: 66 RLKRKAVNSWTAVQDTFYSTK 86

[Close]
BLAST of CmoCh20G002590 vs. NCBI nr
Match: XP_022944503.1 (uncharacterized protein LOC111448941 isoform X2 [Cucurbita moschata])

HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 3  TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR 62
          TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR
Sbjct: 6  TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR 65

Query: 63 LKRKAVNSWTAVQDTFYSTK 83
          LKRKAVNSWTAVQDTFYSTK
Sbjct: 66 LKRKAVNSWTAVQDTFYSTK 85

[Close]
BLAST of CmoCh20G002590 vs. NCBI nr
Match: KAG7010410.1 (hypothetical protein SDJN02_27203, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 3  TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR 62
          TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR
Sbjct: 12 TGNWLLVEEERKHWSIEVSSNYWEEIVKILSIQSGNQISTTMQRIKASGISIVSSISAAR 71

Query: 63 LKRKAVNSWTAVQDTFYSTK 83
          LKRKAVNSWTAVQDTFYSTK
Sbjct: 72 LKRKAVNSWTAVQDTFYSTK 91

[Close]
BLAST of CmoCh20G002590 vs. NCBI nr
Match: XP_023512777.1 (uncharacterized protein LOC111777422 [Cucurbita pepo subsp. pepo] >XP_023512778.1 uncharacterized protein LOC111777422 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.9 bits (172), Expect = 8.5e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 44 MQRIKASGISIVSSISAARLKRKAVNSWTAVQDTFYSTK 83
          MQR+KASG SIVSSISAARLKRKAVNSWTAVQDTFYSTK
Sbjct: 1  MQRLKASGTSIVSSISAARLKRKAVNSWTAVQDTFYSTK 39

[Close]
BLAST of CmoCh20G002590 vs. NCBI nr
Match: KAG6570552.1 (hypothetical protein SDJN03_29467, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.9 bits (172), Expect = 8.5e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 44 MQRIKASGISIVSSISAARLKRKAVNSWTAVQDTFYSTK 83
          MQR+KASG SIVSSISAARLKRKAVNSWTAVQDTFYSTK
Sbjct: 1  MQRLKASGTSIVSSISAARLKRKAVNSWTAVQDTFYSTK 39

The following BLAST results are available for this feature:
BLAST of CmoCh20G002590 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G002590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FUK94.4e-35100.00uncharacterized protein LOC111448941 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FY401.7e-34100.00uncharacterized protein LOC111448941 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A0A0KGZ09.2e-0992.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168230 PE=4 SV=1[more]
A0A6J1JEZ32.1e-0892.31uncharacterized protein LOC111483894 OS=Cucurbita maxima OX=3661 GN=LOC111483894... [more]
A0A1S3C2Q62.7e-0892.31uncharacterized protein LOC103496349 OS=Cucumis melo OX=3656 GN=LOC103496349 PE=... [more]
BLAST of CmoCh20G002590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944501.19.1e-35100.00uncharacterized protein LOC111448941 isoform X1 [Cucurbita moschata] >XP_0229445... [more]
XP_022944503.13.4e-34100.00uncharacterized protein LOC111448941 isoform X2 [Cucurbita moschata][more]
KAG7010410.13.4e-34100.00hypothetical protein SDJN02_27203, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023512777.18.5e-0994.87uncharacterized protein LOC111777422 [Cucurbita pepo subsp. pepo] >XP_023512778.... [more]
KAG6570552.18.5e-0994.87hypothetical protein SDJN03_29467, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh20G002590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G002590.1CmoCh20G002590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
cellular_component GO:0016021 integral component of membrane