CmoCh20G002530 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G002530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionSmall ubiquitin-related modifier
LocationCmo_Chr20: 1222686 .. 1225035 (-)
RNA-Seq ExpressionCmoCh20G002530
SyntenyCmoCh20G002530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCCATAGGCCCACTGTCACTTACCTATATGATTTCTTTTTTGAAAAAGGAAATACTTATTTCCTCTTTTCAGGAGTCGGGGAAATCAGAAGGATTTGAACCCTAATTTCTGGCAAATCGGCAGATTGAACAATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGTTGGTTGGTTTCTTTCTGGAGGAATTAAGTTCACGCTTGAAGGTTTCATTGCTGATATTTCTTTAATGTGTTTGTTGTCTCTTGATGTTGTCTGGCTTTTGCCTTCTCTTTTCTCTCTCTTTCTACTGTTGAATCGCTTTTTGGTTGTTACGGAAAATTGAATCCCGAAAATGAAAAAAAATGTTCATCTAATTATGTTTTGTTCTTTTTCTTTTTTTTCCTTCGAAACTTTCTCTCTCAGAATCTAGCCAAGTCAATTAATTGATAGGTGGAATTATAGTTTCCGTTTGTTTTTGTAATATTTGCAGTTTCGGTCGCATTCAGACTGTTCCATTCTTCTTTTTGTTTGTTATACTCACTCAGGGTAGCAAAATCCTGCGTAGCTTTGATTGTTCTTTTGGCGAAGACTTCGTAGGTGCCATGCTGCTTAAGTACTTCTGGGTTATTTGGGAATGAATTTGACATAGATGATCAAGACCGAGTGCTGGTCCTCCTGTCCTGTCCTTGATAATCTATTGATTCTTTGATATTCTTCTAATTTACTTTTCATTGGGATGGATTTGCCGCTTGTGGATTGAATACCTGCTGGGTTGTGGCCTTACCGAGTATTGACTGCACATTTACTTTTTTGATCTTTTAAATAGGGCTTTTGGGGTGTTTTTTTAGCTTGAATACATGAGCATTTGTGGGTTTTCTCTGAAATTTGGTTGTATTCTTTTGTTCATTTTGTTTGAATACATTACGAAATGGATTTTTTCACTATCACTTCCAATGGAGTGGTTTTAATGTATTTTAAAAATTCATGTAAATGTGTTCTAAACCAAGCCTTAAAAAATAGAATGGATTTTCTAAGCTTCTATGGGAGTTTCTCACAATTCTTTCACTATTTCAATGAAAGGATCAGTTGGGCCATTAAATTAAATAAGAATAGTACTCTAAAGTCTGGCACATGCCTAAGCAGCAGAAGAATTAAGACAGTCTATCAGCCATCTTAATAGTCAATACATGCCATGGAAATGTACATCTGTGTGGTTTTAATTCTTTTTTAAACCTTGAGAAGAATGCTGCTTTGTGGTCTTCGTTGTGATTATTGATACAAATGGCAGTGAATTGAGTGGACGCTCGGTTTAATCCATCTACTGAGTTATTTTTTTTACTAAGGCTAGGAAGAGCAAGGAGATTGAAAGTGCTTATGAATGCTCAGCTCCATTTTTCTGTCCCAAAATTTTCTATCTTGGAGTGATTGATCCAATGTATCAATCTTCATGGTTAATACATTCCATGGAAATAATTTTCTTGATCTTCCTATTGTAGGATTCCTTTTGTGGGCTTATTTTTGATATGCCTTATTGCATTGTTTCACTTTTCTCCATCAAAGTTTGTTTCTTTACCAAAAAATTATGGGTTTGTATTTGTGAAAGACTAACATCTTAATTCTGAAATTTTGATTTCCTATAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCCGACGAGGTATCCCTTTCCCTGATATTAGCACCCCATTAGATACCCTAATATTAAAATTCATGAATTTTTAGTAAAAGCATGTAATTTTTACCAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACGGGTGGATCCAGTGGTTGAAGTACGTGGGGTGTTGGATATGCTCCTTTAGTATTTAGTATTTTATGTGTGTCATAATTATCTGCTTAAGCCAGCAGACTTCTAATCCCTGATGTCAATATTATTATTATTATCTTCTCGTATCACTTGTTGTTACTTGGGTGGTTGTATGGATTGAAAGCTTCAGCAGGAAGCATTAGTAGCACATTTGGGAAGTTAATTACAATGTACCAACCTGTTTTTTTCCTCCTCCACGTTGAAAATGGTAGACCATTTTAATTTCATTTCAAAGCTTCAGCAGGAAGCATTACTAGATGATTTGGAATCGGGAATACCATTAATTCATTTGAACCACACAGAATGCTTCAAAAAAGAATGCTGATTCGAC

mRNA sequence

AGCCCATAGGCCCACTGTCACTTACCTATATGATTTCTTTTTTGAAAAAGGAAATACTTATTTCCTCTTTTCAGGAGTCGGGGAAATCAGAAGGATTTGAACCCTAATTTCTGGCAAATCGGCAGATTGAACAATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACGGGTGGATCCAGTGGTTGAAGTACGTGGGGTGTTGGATATGCTCCTTTAGTATTTAGTATTTTATGTGTGTCATAATTATCTGCTTAAGCCAGCAGACTTCTAATCCCTGATGTCAATATTATTATTATTATCTTCTCGTATCACTTGTTGTTACTTGGGTGGTTGTATGGATTGAAAGCTTCAGCAGGAAGCATTAGTAGCACATTTGGGAAGTTAATTACAATGTACCAACCTGTTTTTTTCCTCCTCCACGTTGAAAATGGTAGACCATTTTAATTTCATTTCAAAGCTTCAGCAGGAAGCATTACTAGATGATTTGGAATCGGGAATACCATTAATTCATTTGAACCACACAGAATGCTTCAAAAAAGAATGCTGATTCGAC

Coding sequence (CDS)

ATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAGAGCAAACTCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACGGGTGGATCCAGTGGTTGA

Protein sequence

MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Homology
[Close]
BLAST of CmoCh20G002530 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-43
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0 

Query: 6   NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
           +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS G
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96

[Close]
BLAST of CmoCh20G002530 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-41
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           RLRAEQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGA 94

[Close]
BLAST of CmoCh20G002530 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-38
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0 

Query: 10 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]
BLAST of CmoCh20G002530 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 5   TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 64
           T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ F
Sbjct: 21  TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRF 80

Query: 65  LFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           L DG R+R +QTP EL+MEDGD+I+A+L Q GG
Sbjct: 81  LVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]
BLAST of CmoCh20G002530 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.5e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of CmoCh20G002530 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.8e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]
BLAST of CmoCh20G002530 vs. ExPASy TrEMBL
Match: A0A6J1JFC9 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.8e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]
BLAST of CmoCh20G002530 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of CmoCh20G002530 vs. ExPASy TrEMBL
Match: A0A1S3C3V0 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of CmoCh20G002530 vs. ExPASy TrEMBL
Match: A0A6J1JCZ0 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]
BLAST of CmoCh20G002530 vs. NCBI nr
Match: KAG6570548.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.3 bits (508), Expect = 7.9e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 243 MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 302

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 303 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 342

[Close]
BLAST of CmoCh20G002530 vs. NCBI nr
Match: XP_022943304.1 (small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022986048.1 small ubiquitin-related modifier 1 [Cucurbita maxima] >XP_023512038.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >XP_023513384.1 small ubiquitin-related modifier 1 [Cucurbita pepo subsp. pepo] >KAG6570547.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010405.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7010406.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.3 bits (508), Expect = 7.9e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]
BLAST of CmoCh20G002530 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.0e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of CmoCh20G002530 vs. NCBI nr
Match: XP_022986050.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima])

HSP 1 Score: 198.0 bits (502), Expect = 3.9e-47
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTPQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 100

[Close]
BLAST of CmoCh20G002530 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 6.7e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]
BLAST of CmoCh20G002530 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 174.9 bits (442), Expect = 3.3e-44
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0 

Query: 6   NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
           +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2   SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66  FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG 101
           FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS G
Sbjct: 62  FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96

[Close]
BLAST of CmoCh20G002530 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-42
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6   EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           RLRAEQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  RLRAEQTPDELEMEDGDEIDAMLHQTGGGA 94

[Close]
BLAST of CmoCh20G002530 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-39
Identity = 85/103 (82.52%), Postives = 86/103 (83.50%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 69
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 70  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG +
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGA 107

[Close]
BLAST of CmoCh20G002530 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 97.4 bits (241), Expect = 6.7e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

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BLAST of CmoCh20G002530 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 5.7e-20
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 0 

Query: 12  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 71
           DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5   DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 72  RAEQTPDELEMEDGDEIDAMLHQTGGSS 100
           +  QTP+EL +ED DEI+A   Q GG S
Sbjct: 65  KLNQTPNELGLEDEDEIEAFGEQLGGFS 92

The following BLAST results are available for this feature:
BLAST of CmoCh20G002530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P558524.7e-4390.53Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1... [more]
Q9FLP62.6e-4194.44Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1... [more]
P558571.2e-3889.01Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
O133511.2e-2255.91Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
Q9FLP59.5e-2055.06Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1... [more]
BLAST of CmoCh20G002530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FTW73.8e-48100.00Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P... [more]
A0A6J1JFC93.8e-48100.00Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483904 PE=... [more]
A0A5A7UHK71.5e-47100.00Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C3V01.5e-47100.00Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103496358 PE=3 SV... [more]
A0A6J1JCZ01.9e-4799.00Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111483905 PE=... [more]
BLAST of CmoCh20G002530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570548.17.9e-48100.00Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022943304.17.9e-48100.00small ubiquitin-related modifier 1 [Cucurbita moschata] >XP_022944672.1 small ub... [more]
XP_008456407.13.0e-47100.00PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small... [more]
XP_022986050.13.9e-4799.00small ubiquitin-related modifier 1-like [Cucurbita maxima][more]
XP_004150752.16.7e-4798.99small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu... [more]
BLAST of CmoCh20G002530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26840.13.3e-4490.53small ubiquitin-like modifier 1 [more]
AT5G55160.11.8e-4294.44small ubiquitin-like modifier 2 [more]
AT5G55160.21.1e-3982.52small ubiquitin-like modifier 2 [more]
AT5G55170.16.7e-2155.06small ubiquitin-like modifier 3 [more]
AT5G55856.15.7e-2052.27Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 22..93
e-value: 2.5E-14
score: 63.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 20..97
score: 15.906139
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 22..92
e-value: 5.3E-25
score: 87.0
NoneNo IPR availableGENE3D3.10.20.90coord: 1..97
e-value: 4.7E-41
score: 141.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..98
NoneNo IPR availablePANTHERPTHR10562:SF87SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..98
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 20..93
e-value: 3.94435E-48
score: 145.834
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 10..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G002530.1CmoCh20G002530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016925 protein sumoylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0031386 protein tag
molecular_function GO:0044389 ubiquitin-like protein ligase binding
molecular_function GO:0005515 protein binding