CmoCh20G002390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G002390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH30-like
Location	Cmo_Chr20: 1161412 .. 1164192 (+)
RNA-Seq Expression	CmoCh20G002390
Synteny	CmoCh20G002390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACATTATCAATGGCTTCCGCCGTTGAATCACACAAAGACTACCAGAGACTCGGATTGTGACTCCGAGAAGGACTCTCCGCCGCATTGGGTGCTGACTCGCTCGCCATTGACGCGCCGTCAAGTTCTCTCTGTTCGCCACTCAATTCTGTAACCAAGACGACAATGTCGGCCTTCCGCTTCTAATTTTTCCATTTCTGAAATCACCCATTTGATCTCCTTCAGCCCTTTCAATTTCCTTTCCGGGCAGTGTCTCCCATGGGTCAGTTCTCGCGGATTTGCTCTTACGATGGGGTTTGCGCTAACTCTGCTGCGATGAGAAATGGGTCGGCCTCAACTTCTTCATTGGTGCTCGATAGTGAGAGAGATGAGCTCATCGAGGCACCATTGAAGCTTGAGAGTAAAGGGGTTCCGGCTGAGAGGAGCGCGGCGGCGCTGAAGAACCACAGCGAGGCTGAGAGAAGGCGTAGAGCAAGAATCAATGGTCATCTTGGGAGTCTAAGAAGTCTCGTCCCCGGTGGTAAGAAGGTGGGTGTTTTTGTTTTTCTGCCATTTTTGGTTATTAGGGATTTTGATTGAGCTCTGTTTCAGTTTGTGTTCATTTTGAATTTGGGGTTTTACTTTTGTCTTCATTAATATAGCTCCAAGACTCTGTTTATGGTAAGGACGTCTCAAATGTCCTGATTAGGATATGCTTGTAGGGTTGTTTATGCCTGGTTTGCTCTAGAAATGGTGAAATTCATTTAAACTTTTGTTTGTTCATTCATATTGCTTGCTTGTTTTGGTGTTGGCTGACATGATCAGTGATCGCTATATGAGTATAAGATGTCAACCATTTGACTCTAAATTGTATGAATGAATTTTCCTGTTCATGAGTGGTGAAGACATCATCTCACTGAAGGCATCTGTTAAGTTACTTCTCAATTTGCCTTACTTAATTTGTAGTAACTCTTCCATGATGTTGTTTGTCTTTTTGGTTGAGGATCGTTGGGAGAGGAGTCCCACATCAGGTAATTAAGGGATTGATCGTGGGTTTAGAGGAGTCCCACATTGGCTAATTAAGGGGTTGATCATGAGTTTAGAAAAGTCCCACATTGGCTAAGTAAGGAGTTGATCATGGGTTTCGAGGAGTCCCACATCGACTAATTAAGGAGTTGAACATGGGTTTCGAGGAGTCCCACATCGACTAATTAAGGAGTTGAACATGGGTTTCGAGGAGCCCCACATCGACTAATTAAAGAGTTGACCATGGGTTTTGAGGAGTCCCACATCGACTAATTAAGGAGTTGATCATGGGTTTCGAGGATTCCCACATTGGCTAATTAAGGGGTTGATCATGGGTTAGGTAAGAAATACATCTCCATTAGTATGAGACCTTCTGAGGAAACTAAAAAATAAAGTCATGAGAGATTATACTCAAAGTGAACGACATCATACCATTGTGGAGACCGGTGGTTTCTAACATGGTATCAGAGTCATGCCCTTAACTTAGCTATGATAATAGAATCCTCAAAATGTCGAACAAAGAAGTTGTGAGCCTCAAAGATGTAGTTAAAAGTGACTCAAGTGTGTAAAAACAAAGGGTGTACTTTGTTCAAGGGCTCTAGAGAATGAGTCAAGCCTCGATGAAAGGGAGGCTGTTTGAGGGCTCCATAGGCTTCAGGGGAGGCTCTATTGTGTACTTTGTTCGAGGGGAGAGGAGTCCCACATCGGCTAATTAAGGGGTTGACCATGAGTTTATAGGTAAGAAATAAGTCTCCATTGGTATAAGACCTTTAGAGGAAATAAAAAATGAAGTCACGAGAGCTTATACCCAAAGTGGACAATATCATACCATTGAACTCTTATGAATGCTTGCCACGAGTATCGTCACCCTGACTTTCTGTGTGTTCAATGACCAGATGGACAAAGCAACACTGCTAGCTGAAGTAATAAGCCATCTGAAAGTGCTGAAAAGAGCTGCTGCAGAAGTTAGTGATGCCCATATTATACCAAAAGAAATCGATGAAATAACAGTTGAACACCAGGAGGATGAATTCGACGGCGTTTCGTATTCGATTCGAGCGTCGCTATGTTGTGATTATAAACCCGGCCTCCTACCCGATTTAAGACGGGCACTTCATGCTCTAGACCTGATAATAAAGAGGGCGGAGATTGGAACCTTAAATGGCAGGATGCAGAACGTGTTGGTGTTAACCAGCTGCAAAGATGGAGATATTGAAACTACTGAATTGCAGACCTCCGTGCACCAAGCCATCAAATCTGTTCTAAACAACTTCTCTGATCCACAAGAGTTCTCGTTTATGGCGTTTCCAAACAAGAGACGGCGAATTTCGCTGCTCGGTTCATCGAGCTCGTCTTCCATGGGCGATTTCTGGTGAGCATATGATTTCTTTTTACTGGTTTTTGCATCTCTTGGGAAGTCAACAGGATAAGTGAGTTGGATATTGCTAAGCCTCACTTATGCATTGAGAAGGATCCGGGATTCGAGCTGGGGTTGAAGTTAGCCCTAGTGATCTGATGGTGCCAAGTGGAGGGGTCATCGCTCAACGGGGGAAAGTTACTCCATAGATGAAAGTTTTGATGTTAAGACTTCCAAGCTTGACTAGAAGTACTTGGTACGTACCTGAGGGTACTCCATGATCTTTTGTTTCTTTATGTTTTTAACAAAACCTACTTGTAAAAGTATTTTAACAATGTTCTTGGTGATGTTCAAATTGCACGAGTGACTCCATAGATTATATACAAATATGCCCCTCTTGAATTTATTTCTGAATATTCG

mRNA sequence

TGACATTATCAATGGCTTCCGCCGTTGAATCACACAAAGACTACCAGAGACTCGGATTGTGACTCCGAGAAGGACTCTCCGCCGCATTGGGTGCTGACTCGCTCGCCATTGACGCGCCGTCAAGTTCTCTCTGTTCGCCACTCAATTCTGTAACCAAGACGACAATGTCGGCCTTCCGCTTCTAATTTTTCCATTTCTGAAATCACCCATTTGATCTCCTTCAGCCCTTTCAATTTCCTTTCCGGGCAGTGTCTCCCATGGGTCAGTTCTCGCGGATTTGCTCTTACGATGGGGTTTGCGCTAACTCTGCTGCGATGAGAAATGGGTCGGCCTCAACTTCTTCATTGGTGCTCGATAGTGAGAGAGATGAGCTCATCGAGGCACCATTGAAGCTTGAGAGTAAAGGGGTTCCGGCTGAGAGGAGCGCGGCGGCGCTGAAGAACCACAGCGAGGCTGAGAGAAGGCGTAGAGCAAGAATCAATGGTCATCTTGGGAGTCTAAGAAGTCTCGTCCCCGGTGGTAAGAAGATGGACAAAGCAACACTGCTAGCTGAAGTAATAAGCCATCTGAAAGTGCTGAAAAGAGCTGCTGCAGAAGTTAGTGATGCCCATATTATACCAAAAGAAATCGATGAAATAACAGTTGAACACCAGGAGGATGAATTCGACGGCGTTTCGTATTCGATTCGAGCGTCGCTATGTTGTGATTATAAACCCGGCCTCCTACCCGATTTAAGACGGGCACTTCATGCTCTAGACCTGATAATAAAGAGGGCGGAGATTGGAACCTTAAATGGCAGGATGCAGAACGTGTTGGTGTTAACCAGCTGCAAAGATGGAGATATTGAAACTACTGAATTGCAGACCTCCGTGCACCAAGCCATCAAATCTGTTCTAAACAACTTCTCTGATCCACAAGAGTTCTCGTTTATGGCGTTTCCAAACAAGAGACGGCGAATTTCGCTGCTCGGTTCATCGAGCTCGTCTTCCATGGGCGATTTCTGGTGAGCATATGATTTCTTTTTACTGGTTTTTGCATCTCTTGGGAAGTCAACAGGATAAGTGAGTTGGATATTGCTAAGCCTCACTTATGCATTGAGAAGGATCCGGGATTCGAGCTGGGGTTGAAGTTAGCCCTAGTGATCTGATGGTGCCAAGTGGAGGGGTCATCGCTCAACGGGGGAAAGTTACTCCATAGATGAAAGTTTTGATGTTAAGACTTCCAAGCTTGACTAGAAGTACTTGGTACGTACCTGAGGGTACTCCATGATCTTTTGTTTCTTTATGTTTTTAACAAAACCTACTTGTAAAAGTATTTTAACAATGTTCTTGGTGATGTTCAAATTGCACGAGTGACTCCATAGATTATATACAAATATGCCCCTCTTGAATTTATTTCTGAATATTCG

Coding sequence (CDS)

ATGGGTCAGTTCTCGCGGATTTGCTCTTACGATGGGGTTTGCGCTAACTCTGCTGCGATGAGAAATGGGTCGGCCTCAACTTCTTCATTGGTGCTCGATAGTGAGAGAGATGAGCTCATCGAGGCACCATTGAAGCTTGAGAGTAAAGGGGTTCCGGCTGAGAGGAGCGCGGCGGCGCTGAAGAACCACAGCGAGGCTGAGAGAAGGCGTAGAGCAAGAATCAATGGTCATCTTGGGAGTCTAAGAAGTCTCGTCCCCGGTGGTAAGAAGATGGACAAAGCAACACTGCTAGCTGAAGTAATAAGCCATCTGAAAGTGCTGAAAAGAGCTGCTGCAGAAGTTAGTGATGCCCATATTATACCAAAAGAAATCGATGAAATAACAGTTGAACACCAGGAGGATGAATTCGACGGCGTTTCGTATTCGATTCGAGCGTCGCTATGTTGTGATTATAAACCCGGCCTCCTACCCGATTTAAGACGGGCACTTCATGCTCTAGACCTGATAATAAAGAGGGCGGAGATTGGAACCTTAAATGGCAGGATGCAGAACGTGTTGGTGTTAACCAGCTGCAAAGATGGAGATATTGAAACTACTGAATTGCAGACCTCCGTGCACCAAGCCATCAAATCTGTTCTAAACAACTTCTCTGATCCACAAGAGTTCTCGTTTATGGCGTTTCCAAACAAGAGACGGCGAATTTCGCTGCTCGGTTCATCGAGCTCGTCTTCCATGGGCGATTTCTGGTGA

Protein sequence

MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSSSSSSMGDFW

Homology

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BLAST of CmoCh20G002390 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.6e-30
Identity = 80/194 (41.24%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           K+ ++ +   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 160 KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHV 219

Query: 105 KVLKRAAAEVSDAHIIPKEIDEITVEHQEDEFDGVS-YSIRASLCCDYKPGLLPDLRRAL 164
           K LKR  + +S+ +++P E DE+TV   E+E  G   + I+ASLCC+ +  LLPD+ + L
Sbjct: 220 KELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTL 279

Query: 165 HALDLIIKRAEIGTLNGRMQNVLVLTSCKDG--DIETTELQTSVHQAIKSVLNNFSDPQE 224
            A+ L   +AEI T+ GR++NVL +T  +    ++E      ++ +A+K+V+   +   E
Sbjct: 280 KAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSN--VE 339

Query: 225 FSFMAFPNKRRRIS 236
            S  +   KR+R+S
Sbjct: 340 ESSSSGNAKRQRMS 351

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BLAST of CmoCh20G002390 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.9e-27
Identity = 67/145 (46.21%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           KL ++ V   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 118 KLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHM 177

Query: 105 KVLKRAAAEVSDAHIIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALH 164
           K LKR  ++++D + +P E D++TV+   ++ +G +  IRAS CC  +  L+ D+  AL 
Sbjct: 178 KELKRQTSQITDTYQVPTECDDLTVDSSYNDEEG-NLVIRASFCCQDRTDLMHDVINALK 237

Query: 165 ALDLIIKRAEIGTLNGRMQNVLVLT 190
           +L L   +AEI T+ GR++N+L L+
Sbjct: 238 SLRLRTLKAEIATVGGRVKNILFLS 261

[Close]

BLAST of CmoCh20G002390 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 43  PLKLESKG--VPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEV 102
           PL +   G  +  +R+ AAL+NH EAERRRR RIN HL  LR+++    K DKATLLA+V
Sbjct: 49  PLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKV 108

Query: 103 ISHLKVLKRAAAEVSDAH--IIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPD 162
           +  ++ LK+   E SD+   ++P E DEI+V H  D  +      +ASLCC+ +  LLPD
Sbjct: 109 VQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPD 168

Query: 163 LRRALHALDLIIKRAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFS 218
           L   L +L++   RAE+ T+ GR ++VLV+ +  D ++   E    +  A+KS+L   S
Sbjct: 169 LMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA--DKEMHGVESVHFLQNALKSLLERSS 225

[Close]

BLAST of CmoCh20G002390 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.1e-22
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           +++ A+L+NH EAER+RRARIN HL  LR L+    K DK+TLLA+V+  +K LK+   E
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 114 VSDAHIIPKEIDEITVEHQEDEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLIIK 173
           ++D   IP E DEI+V + ED   G    I  + S CC+ +P LL DL   L +L +   
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 174 RAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFS 218
            A++ T+ GR +NVLV+ +  D +    +    +  A+KS+L   S
Sbjct: 160 FADMTTVGGRTRNVLVVAA--DKEHHGVQSVNFLQNALKSLLERSS 202

[Close]

BLAST of CmoCh20G002390 vs. ExPASy Swiss-Prot
Match: Q9XEF0 (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18
Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           E++ +  ++H  AE+RRR RIN HL +LR LVP   K+DKA LLA VI  +K LK+ AAE
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 114 VSDAHIIPKEIDEITVEHQE-DEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLII 173
                 +P E DE+TV+ +   +F+  + +I  +AS CC+ +P  + ++ R L  L L  
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177

Query: 174 KRAEIGTLNGRMQNVLVLTSCKDGDI-ETTELQTS---VHQAIKSVLNNF--SDPQEFSF 233
            +AEI ++ GRM+   +L   KD +  ETT +  S   + Q++ S LN    S     S 
Sbjct: 178 IQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSV 237

[Close]

BLAST of CmoCh20G002390 vs. ExPASy TrEMBL
Match: A0A6J1FYT0 (transcription factor bHLH30-like OS=Cucurbita moschata OX=3662 GN=LOC111449049 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

[Close]

BLAST of CmoCh20G002390 vs. ExPASy TrEMBL
Match: A0A6J1J9W6 (transcription factor bHLH30-like OS=Cucurbita maxima OX=3661 GN=LOC111483883 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123
Identity = 239/249 (95.98%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDG CANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGFCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQED FD     IRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDGFD-----IRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSD QEFSFMAFPNKR+RISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDSQEFSFMAFPNKRQRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSS+GDFW
Sbjct: 241 SSSSVGDFW 244

[Close]

BLAST of CmoCh20G002390 vs. ExPASy TrEMBL
Match: A0A5A7UEK8 (Transcription factor bHLH30-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001120 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114
Identity = 224/253 (88.54%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDFW 250
             SSSSSS GDFW
Sbjct: 241 FNSSSSSSRGDFW 252

[Close]

BLAST of CmoCh20G002390 vs. ExPASy TrEMBL
Match: A0A1S3C3W5 (transcription factor bHLH30-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496369 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114
Identity = 224/253 (88.54%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDFW 250
             SSSSSS GDFW
Sbjct: 241 FNSSSSSSRGDFW 252

[Close]

BLAST of CmoCh20G002390 vs. ExPASy TrEMBL
Match: A0A1S3C4H4 (transcription factor bHLH30-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496369 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.5e-113
Identity = 223/252 (88.49%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDF 249
             SSSSSS GDF
Sbjct: 241 FNSSSSSSRGDF 251

[Close]

BLAST of CmoCh20G002390 vs. NCBI nr
Match: XP_022944660.1 (transcription factor bHLH30-like [Cucurbita moschata])

HSP 1 Score: 478.8 bits (1231), Expect = 2.9e-131
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

[Close]

BLAST of CmoCh20G002390 vs. NCBI nr
Match: KAG7010390.1 (Transcription factor bHLH30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

[Close]

BLAST of CmoCh20G002390 vs. NCBI nr
Match: KAG6570535.1 (Transcription factor basic helix-loop-helix 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130
Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCAN+A MRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANAAVMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

[Close]

BLAST of CmoCh20G002390 vs. NCBI nr
Match: XP_023512593.1 (transcription factor bHLH30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCANSA +RNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANSAVIRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKE+DEITVEHQED FDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEVDEITVEHQEDGFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

[Close]

BLAST of CmoCh20G002390 vs. NCBI nr
Match: XP_022986021.1 (transcription factor bHLH30-like [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 4.9e-123
Identity = 239/249 (95.98%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDG CANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGFCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQED FD     IRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDGFD-----IRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSD QEFSFMAFPNKR+RISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDSQEFSFMAFPNKRQRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSS+GDFW
Sbjct: 241 SSSSVGDFW 244

[Close]

BLAST of CmoCh20G002390 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-31
Identity = 80/194 (41.24%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           K+ ++ +   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 160 KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHV 219

Query: 105 KVLKRAAAEVSDAHIIPKEIDEITVEHQEDEFDGVS-YSIRASLCCDYKPGLLPDLRRAL 164
           K LKR  + +S+ +++P E DE+TV   E+E  G   + I+ASLCC+ +  LLPD+ + L
Sbjct: 220 KELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTL 279

Query: 165 HALDLIIKRAEIGTLNGRMQNVLVLTSCKDG--DIETTELQTSVHQAIKSVLNNFSDPQE 224
            A+ L   +AEI T+ GR++NVL +T  +    ++E      ++ +A+K+V+   +   E
Sbjct: 280 KAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSN--VE 339

Query: 225 FSFMAFPNKRRRIS 236
            S  +   KR+R+S
Sbjct: 340 ESSSSGNAKRQRMS 351

[Close]

BLAST of CmoCh20G002390 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-28
Identity = 67/145 (46.21%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           KL ++ V   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 118 KLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHM 177

Query: 105 KVLKRAAAEVSDAHIIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALH 164
           K LKR  ++++D + +P E D++TV+   ++ +G +  IRAS CC  +  L+ D+  AL 
Sbjct: 178 KELKRQTSQITDTYQVPTECDDLTVDSSYNDEEG-NLVIRASFCCQDRTDLMHDVINALK 237

Query: 165 ALDLIIKRAEIGTLNGRMQNVLVLT 190
           +L L   +AEI T+ GR++N+L L+
Sbjct: 238 SLRLRTLKAEIATVGGRVKNILFLS 261

[Close]

BLAST of CmoCh20G002390 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-26
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 43  PLKLESKG--VPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEV 102
           PL +   G  +  +R+ AAL+NH EAERRRR RIN HL  LR+++    K DKATLLA+V
Sbjct: 49  PLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKV 108

Query: 103 ISHLKVLKRAAAEVSDAH--IIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPD 162
           +  ++ LK+   E SD+   ++P E DEI+V H  D  +      +ASLCC+ +  LLPD
Sbjct: 109 VQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPD 168

Query: 163 LRRALHALDLIIKRAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFS 218
           L   L +L++   RAE+ T+ GR ++VLV+ +  D ++   E    +  A+KS+L   S
Sbjct: 169 LMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA--DKEMHGVESVHFLQNALKSLLERSS 225

[Close]

BLAST of CmoCh20G002390 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-23
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           +++ A+L+NH EAER+RRARIN HL  LR L+    K DK+TLLA+V+  +K LK+   E
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 114 VSDAHIIPKEIDEITVEHQEDEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLIIK 173
           ++D   IP E DEI+V + ED   G    I  + S CC+ +P LL DL   L +L +   
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 174 RAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFS 218
            A++ T+ GR +NVLV+ +  D +    +    +  A+KS+L   S
Sbjct: 160 FADMTTVGGRTRNVLVVAA--DKEHHGVQSVNFLQNALKSLLERSS 202

[Close]

BLAST of CmoCh20G002390 vs. TAIR 10
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-19
Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           E++ +  ++H  AE+RRR RIN HL +LR LVP   K+DKA LLA VI  +K LK+ AAE
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 114 VSDAHIIPKEIDEITVEHQE-DEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLII 173
                 +P E DE+TV+ +   +F+  + +I  +AS CC+ +P  + ++ R L  L L  
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177

Query: 174 KRAEIGTLNGRMQNVLVLTSCKDGDI-ETTELQTS---VHQAIKSVLNNF--SDPQEFSF 233
            +AEI ++ GRM+   +L   KD +  ETT +  S   + Q++ S LN    S     S 
Sbjct: 178 IQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSV 237

The following BLAST results are available for this feature:

BLAST of CmoCh20G002390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7Y1	8.6e-30	41.24	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
Q9LS08	8.9e-27	46.21	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]
O80674	3.8e-25	40.78	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
Q9LET0	5.1e-22	40.36	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]
Q9XEF0	1.5e-18	37.57	Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1	[more]

BLAST of CmoCh20G002390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYT0	1.4e-131	100.00	transcription factor bHLH30-like OS=Cucurbita moschata OX=3662 GN=LOC111449049 P...	[more]
A0A6J1J9W6	2.4e-123	95.98	transcription factor bHLH30-like OS=Cucurbita maxima OX=3661 GN=LOC111483883 PE=...	[more]
A0A5A7UEK8	3.4e-114	88.54	Transcription factor bHLH30-like isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C3W5	3.4e-114	88.54	transcription factor bHLH30-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A1S3C4H4	6.5e-113	88.49	transcription factor bHLH30-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]

BLAST of CmoCh20G002390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944660.1	2.9e-131	100.00	transcription factor bHLH30-like [Cucurbita moschata]	[more]
KAG7010390.1	1.9e-130	99.60	Transcription factor bHLH30, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6570535.1	1.9e-130	99.20	Transcription factor basic helix-loop-helix 30, partial [Cucurbita argyrosperma ...	[more]
XP_023512593.1	2.1e-129	98.39	transcription factor bHLH30-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986021.1	4.9e-123	95.98	transcription factor bHLH30-like [Cucurbita maxima]	[more]

BLAST of CmoCh20G002390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68810.1	6.1e-31	41.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	6.4e-28	46.21	basic helix-loop-helix 32	[more]
AT2G41130.1	2.7e-26	40.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	3.6e-23	40.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G40200.1	1.1e-19	37.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 64..113 e-value: 1.5E-12 score: 57.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 62..107 e-value: 5.3E-11 score: 42.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 58..107 score: 15.726024
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 54..118 e-value: 2.8E-15 score: 57.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 62..114
None	No IPR available	PANTHER	PTHR45844:SF3	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 9..249
None	No IPR available	PANTHER	PTHR45844	TRANSCRIPTION FACTOR BHLH30	coord: 9..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G002390.1	CmoCh20G002390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity