CmoCh20G001770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G001770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	Cmo_Chr20: 884234 .. 891364 (-)
RNA-Seq Expression	CmoCh20G001770
Synteny	CmoCh20G001770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCTGTAAGAGCCTCCACCCCATCTTTGAGAACCCATTGCCTGAAAATCAAACCCTTCTCGAGTCACTCACGTCCTCATGGACCCACAACGTTAAGCCTGTGGAGCAGAGTCTGCAACTCTGCACAGAGGGGTTGGGGTCAGAAAGCTCGGATGATGTTGAAAATGAAAATTGGGAAATCAAAGAAGGGAAAGTGGGGATTGGTTGTGTCAAGCATGTTGCATCACGGATGAGTACCAAAGCTTTGCCTCCGCCTTTGTCTTTCATGGGAAGGAGTGGAAAGGGTGGGGTTTGCTTCATGTCGTACAGGGAAGATGGAAGGTTGGTGTTGAAAGAAGTAAGAATTGGGTGTCGGGAATTTGTAGAAGCTCGCAGAGAGGATGGGCGGCTGAAGCTGCAAATTGTTCAACCCAATGAGGAAGATGAAGATGAAGATGAAGAGGCAGAGGAAGATGAAGAACATGATGATGTAGAAGCAGAGACACCCTCGTCCTTTGTTGTGTAAGCTGTTCTGTTCTGTGTCTGGTTTTCAAGAAAAGCAAGTGTAAGAGAACTGTCAAATCTTCTTTCTTCTGTTGTTCTTGGTTACTGGATGATGTTAAGAGCAATACCTCAAACTTGAAGCAGTAAAGGATCTTTGTTCTATGATATACTAAGCAAAACTGTGAGGCTTACGACGATATGTAACAGGCAAAAACGGACAATATCTAGTAACAATGGTCTTATAAATAGTTTTAGAGACAGTCACCAAACGACGAGAGACATTAGTTAGAGTAAGGCTTATGGGTATAGCACTAACATGTGCGAGCTATTAGGCATTTTTTTTTTCAATACCTCGTTGAGGAGGGTAAGAAAAAACGTCAATGGAAATTCGAGACAACCCCCAACATCCACCGCTGCTCCATCGAACCTCTTTCTTCACATAGTCAGGAAGTGGGTTCAAGTGGGTTCGTGAACCATGTGTAGAGAGGGGGCAAGGCTCCCATGGAGAGCCAAACAAACAACAAGCTAGCCTTAATAAGACTGGTCATCCTTATGGTGTTGTGCCACCCTGTTATGGAACAAGGAGTCTACGACACCTAAACAACCGCTAGTGAGACCCTCTCCATAGTAGACACGTTTTAAAATCATGAGGCTAACGACGACATGTAACATGTCAAAGTGGACAATATCAATTAGCGATGTGCTTGGGCTGCTACAAATAGTATCAAAGCCAGAGATACTGGAAGTGTGATAAATGGTATTCAGGCTAGATACTGGAGATGTGCTAGCGAGGACCTCAAAAAAAGGTGAATTGTGAGATTATGCATCCTCCGGGGAGATTGAATGAATATAAAATAAAAAAGGTATTATTAGGTCATAAATTGAATGAAGTAGACGAGGGAGAAAATAAAAGAGGAAATAATTTGTATCTACATTTGATATAATTTAGTATAATTTAATGTTTATTTATGATTATGAAGGGCAAAATTAGTAAATAGATGGCCAATAGAGCCTCAATTCGTAGTTTGAGTTGTGATGGGGTTAATGACCCGTCTTCATTGAAGGAGGAGCCTAGGGTTCGTTCCTCGGCTAAGAACAGGGGGTCCTAATATTTTTCTACGATTCTTCATTTGAAGCTCACAATTTCGGCAGAGTTCTTCTCTAAGTAGTTTCGCTGAGTTTTCGCAGAGAGCGTCTTTGGTACTCTTTTGCTTCTTATATCATCCTTCATGTCTTTCTTCAATCTATCGTTTTCTCCACTCTTGTCATGCGCTACTGTTTTCTTTCTTTCTTTCTTTATTTGTTTTTTCATTTTCCTTTGTGACTCGCGGAATTTTTCTGCGCTTCGTGTTGTTTGAACTCAAAACTTGCACCTTTCTCTTCTATGCCGCGGAATTAATAATACTGCGACGGGTGGAATGTTATTGGAATACTAATCCTAGCAATGTAAAATTTGGGGATACAATTTAAAGGTGAAAGGTTTTATCGAGGGATTCTGAAACTGAGAATCCGTTGTTATAAGAATGCTCCTGCCATGTTCTTAGGAAAAGCGATAGAAAATCATCTTTGGAATTACTGGTGCTTTAGCTTGGATGAGCATCCAACTGTTTAATATCTGAGACTTTGGAAATTTAACCTTTTAAGGGAGAGATATGTGTCAAAAGATAGATTAGAATTTGCGTTACTCCATGAGGTTTGATGTAAAATATGGTATGGCAGTAAGACACTGGTGTACCAAATTGACGTTTGTAGGTTTTGACTATTTTCTCAATTTGGGCAATTGACGATTGTAATATATATAGGCTAAATTGACAACTGACAACTAATCACATCCCTCGTAATATATTTTGGGGCATTTTAACCTTGGCGGGTGTAGACATGATTTTGGCGACGGTCATAAACTCTCATATTGACATGACATGAATAGTAAAAACCAAACTAACATGAAAGCAAGTAAAAAGGGGTTTGGAATGGACATGCGGCCATAGGCAACACGCCTTGGACAAGCATGGCTAGGACATCTGACACGCGGCCACAAGGAGCACGCCTTGGACAAGCATAATCATGAGGTGTTCTATCCCTTTAAATGCCGAGAATCAACTGGTAGGGGAATTACTATTGTGAATACATGCCTCCGCTTGTTTTCACTGGAAAACTTGAGGGTTGGTTCATTTGAAATGATTACTGATTTTAGATGCATGCTTCTTTTCCTTTTGTTTCCTAGCTTTTTACCAACTCAACGTACTCAGTTTATGCGTTGCTTATGAGATAAAGCTGAATGAGGAGTCTTTGTATATGATGTTATTCACTGATTATTACGACGGTCAGGACGATGATGCCCACATCTGATTGCAGTTCCTTTGTTCTTTTTGCAGGGTTTACACAGATTGGTATGTTGTTTGGAACTGCTATATGTTTTTGTGAGATGGACAAAATTGATTCTCCATTTGTAGCAGCAGTCTCATTCCTTTTTTGTCTAAACCTTTTATATCAAAATGGTTCCATTGGATCTCATATGCTACTTTGCGTGGCATTGTTATATCCTTGCATTAAAGTAAAACATTCAATTGTCTCCATAATTTATTCTGCTGTCATTAACATTAGTTTCGTGAGATAGTCAGAAAATGATACCCCTTGAAAAAAGATGTAGAAAGCTAATTTGTCAAAAAGATTTTTTTTTGGTATGGCAATCATTCTGATTTCTAGACGTTCATATCTTTATGTTGTTTTGCACCACCTCCGTGATTCTCATTGCAGTCACTGAGAGACTCGTTAATCGGTCTCTTTTATGCTACTTGTGTTATAAACGTTACCCCTCTAGAAAAAAATTCTTTCACATTTCAATCCCCTCGAGTCTATTCTCATGACAACTTTTCATTTCAGCTTCATATTTTTCTTCTCCATTTGGCCTTTCTGTTTGTTTCCTCCTCTCAGTAATTTTTTATGTCTCCCCATGAATTCTTCTGGCCTCTGTGTCTTCTTCACAGTTACCTTGCAAGCTTGTTTAATTAGACAAATAAGATGCCAAGTGGAAAAGGAAATGCTTCATCTATTGCTAGACCAGTTGAACCTGAGAAGCAAAATGAATCCGAAAAGCCAGTTGACTCTGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTCGAGTATGAAGAAGTAGAGGAGGAGGAAGAGGTGGAAGAAATAGAAGTTGAAGAAGAGGAGGAAGAGGAGGAGGAAGAGGAGGGTGAGGAAGAAGATGTTGAAGAAGTGGAGGATGATGGGAATAATGACAATAGAATTAATGGCCAAAATGAAATTGATAATGATGAGGATGAAAAGAAAAAACATGCCGAGCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATGTTGGTGGTATTCCTCACGATTCTTCTGAAGAAGATTTAAGGCAATTTTGTGAACCCATAGGAGAAGTTACAGAGGTAAGCTCGGTCATGTTTATTCCATTTCCAGATAATGGGCTTTTCACAAGGACTTATAGCATTGTGCTTCAAGCAGGTTCGCGTTATGAGAAGTAAAGAATCAAATGAGAATAAGGGCTTTGCATTTGTTACCTACAGAAGCGTAGAGTTGGCTTCTAAAGCAATTGATGAGCTGAATAACACCGAATTCAAGGTTTACTTTTTACATCTGTTCATAGTTTGCATGTCAATAAGTTGATACATTAAGTGCAAAGTTGGAAGCTAATGTTTAAAATTTGTATATCCTTTGAATTTTTTTAGAATCTTCCATGCCTTGTCTTCCCATTATCCTTTTTCAGTATTTTTATCTTCTGTTTCTCTGTGCTTATGCATGTGACATAGGGAAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCATCGTTTGTTCATTGGTAATGTCCCCAGGAGCTGGGGCGAGGAAGATCTTAAGAAGGTTGTGAAAGACATTGGACCTGGAGTTACGGCTGTGGAACTAGTAAAGGTTAACATGGCAGAATTTTTCATGTTGGATCTTACTTTGCTACATCTGTGTTATGATGTCTTTTTGTTCCATAATTATTGTACTTTTCTCTTTCCAAAGAATTTATAAGTTTGTGCTCGTAACCTGGTGCTACTTTCTTTGATTTGATTTTACCCAATTTTTGGTTGCAGGATATGAAGAATACTAGCAATAACAGGGGTTTTGCTTTTGTTGACTACTATAATCATGCATGTGCTGAGTACTCACGGCAGAAGATGATGAATCCAACATTTAAGCTAGATGATAATGCTCCAACTGTTAGCTGGGCAGACCCTAAAAATGCTGATTCATCTGCTGCTTCACAGGTCTTTGTATCCATGGCCTTTCCGATAAACATAATGACTATTCCTTTGCACCTTTTAGTCGGTTTTTGTATCCATGGCCTTAGTTTATTATCAACTGAAGTCAGGACATGTTAAGTCTTGTTATTCGACTTATCTTTGAGTGATCTGTTTCCATAATAGTTTTTTTTTTTTCTTTTCCCATCTTTTTTGGTCAACACAGGTGAAGGCAGTTTATGTGAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTAAAAAGGCTATTTGATCATCATGGGAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAAGCTGGACAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGATCCAGTGCTATGAAGGCTTTAAAAAATACTGAAAAATATGAATTGGATGGTGATAATTTATCTAGAAGCTCTTCTGAAGTTTTTCATTTTACCCACCACCAAAGTGAGGCTGGTCTTTGATATCCATTTTTTATGCTTATATATTAGGTCAACTTTTGGAATGTTCTCTTGCAAAGCCACAAGCAGATCAGAAGTCTGGAGGATCAAATAGCCAAAAGTCTGGATTGCTTCCCAACTATCCACCTCGTGTTGGATATGGCTTTGTTGGGGGGCCTTATGGTGCTGTAAATGCAGGATATGGTGCTTCTGGTTTTGGTCAGGTAAAGTATTTGTGCATTTGTTTAACTTGGTATTCTCTTGTCTTGATAAGATTAACCTAACCATCTCATTTTATTCCCTTCGTCTTGAGAAGTGGCTAATTGGCTTAGAGTATAGTTATAATTGAAACTCAGAAGAATTCATTGGGAGGAACCATTTGCTGATCGATGGGATTTAGAGAGATTATTTCTCTTCTTTTAAGAAATTTGGGGAAAATACCTCAATCCATAATTATGCATGTGTATCTTTTCTTCTGTTTCAGTACAATGACCATTAATGGACACCTTGATAACTTATCTAAAATTAGTCTGACTGTGCTGTTGCATTTGCTTTTTTGCCTTGGACGTATGATTTAAAGTACACCCTTCTTTAAACTAAGAAAAGAAAAATCTGATTGAAATGCATTTGAGCTGCAGCCGTTGATATATGGAAGAGGACCAACTCCTGCTGGTATGGCAATGATGCCGATGTTGCTTCCTGATGGACGGATTGGCTATGTCTTGTAAGCTCATACATCTCACTCCTACCTTTATTATTAGTTGGAAAATGCAAATCCATGTTGAACTAAATTGCTGCATCTCATACTTTAGCTTCTGCGCTGATGGCTCATCAAAAGCTCTCCCTCCTATATCCTTTTGCAGGCAACAACCAGGATCACAGATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGCAATGGTGGCGGAAGTGGCAGTAAGAATGGCGGCAGTTCTAGCAGGGGGAGGCATACACATGACAACAGTAGCCATGGTCGCAGGTATCGCCCATATTAGTTCTTGCAGTGAACGTTGTGCCCGTGAACGAACACGAAAGGTTTCTGCTAGAGGTTGCCTCTCCCTCCGCCTAACATCGTGATCATAGAGTCTTCCTACCTAATTTATGGGCTGCTTTGTAATGTGGTGGTTAGTTTTTTTTCATTTTTAATCAACGTTACCTAGGAGGTTACAGTTCAAATTAATTAATGTGTTTTGCCCTCGGTTTTGTTCAAATTCAGCTGTGGTAAAAATGGTCTTGAATACGTTACCCCATTGGTATGATTTTAATTGCATTCCTCAAATCCAAATCATTTCTTAAATTAATTTTGATCAACTGTTATAACATTATCAAGTACGTAGCTACCTAATAATAAAGCCTAAATTTAACAGAAAAAATCTATCAAAATTATGATAAATACCTCATTTCGCCTCACTTTAAAGATTGTAGAACTCTATTATTATTATTTTTTTTAAATCCCTCAATTGTTTATATATTAATTTAAAATTAGGTTAAGTTTTCAATTATTGTACATATAAACTATTAGTAATTTAATTAATTTTTTTTCTTAATTAAATTAATTTTATATAGTTTAGGATGGTTTGTGCACTTCAAAAAATAAATTAATAATAAATAAATAAAAAAATCCATTTTTGGATCGTGATTCACGTTAGTATAACGCAGTACGAAGTTTTGGTGCCTCTGTAGGTACCTTTATCTAGAATGCCCGAACAACTACGCAGTGGACTCGCCGTGCAACCAAGCCGATCAATCCCCGACTCTCGCCCTCAGCGGAATCAAAAAACTCTCTTCCTTTTTCGACAATTGAGACGGGAGAGAGGATTTCTTCCTTGA

mRNA sequence

ATGGCTGTCTGTAAGAGCCTCCACCCCATCTTTGAGAACCCATTGCCTGAAAATCAAACCCTTCTCGAGTCACTCACGTCCTCATGGACCCACAACGTTAAGCCTGTGGAGCAGAGTCTGCAACTCTGCACAGAGGGGTTGGGGTCAGAAAGCTCGGATGATGTTGAAAATGAAAATTGGGAAATCAAAGAAGGGAAAGTGGGGATTGGTTGTGTCAAGCATGTTGCATCACGGATGAGTACCAAAGCTTTGCCTCCGCCTTTGTCTTTCATGGGAAGGAGTGGAAAGGGTGGGGTTTGCTTCATGTCGTACAGGGAAGATGGAAGGTTGGTGTTGAAAGAAGTAAGAATTGGGTGTCGGGAATTTGTAGAAGCTCGCAGAGAGGATGGGCGGCTGAAGCTGCAAATTGTTCAACCCAATGAGGAAGATGAAGATGAAGATGAAGAGGCAGAGGAAGATGAAGAACATGATGATGTAGAAGCAGAGACACCCTCGTCCTTTGTTGTCTCACAATTTCGGCAGAGTTCTTCTCTAAGTAGTTTCGCTGAGTTTTCGCAGAGAGCGTCTTTGGGTTTACACAGATTGACAAATAAGATGCCAAGTGGAAAAGGAAATGCTTCATCTATTGCTAGACCAGTTGAACCTGAGAAGCAAAATGAATCCGAAAAGCCAGTTGACTCTGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTCGAGTATGAAGAAGTAGAGGAGGAGGAAGAGGTGGAAGAAATAGAAGTTGAAGAAGAGGAGGAAGAGGAGGAGGAAGAGGAGGGTGAGGAAGAAGATGTTGAAGAAGTGGAGGATGATGGGAATAATGACAATAGAATTAATGGCCAAAATGAAATTGATAATGATGAGGATGAAAAGAAAAAACATGCCGAGCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATGTTGGTGGTATTCCTCACGATTCTTCTGAAGAAGATTTAAGGCAATTTTGTGAACCCATAGGAGAAGTTACAGAGGTTCGCGTTATGAGAAGTAAAGAATCAAATGAGAATAAGGGCTTTGCATTTGTTACCTACAGAAGCGTAGAGTTGGCTTCTAAAGCAATTGATGAGCTGAATAACACCGAATTCAAGGGAAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCATCGTTTGTTCATTGGTAATGTCCCCAGGAGCTGGGGCGAGGAAGATCTTAAGAAGGTTGTGAAAGACATTGGACCTGGAGTTACGGCTGTGGAACTAGTAAAGGATATGAAGAATACTAGCAATAACAGGGGTTTTGCTTTTGTTGACTACTATAATCATGCATGTGCTGAGTACTCACGGCAGAAGATGATGAATCCAACATTTAAGCTAGATGATAATGCTCCAACTGTTAGCTGGGCAGACCCTAAAAATGCTGATTCATCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTAAAAAGGCTATTTGATCATCATGGGAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAAGCTGGACAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGATCCAGTGCTATGAAGGCTTTAAAAAATACTGAAAAATATGAATTGGATGGTCAACTTTTGGAATGTTCTCTTGCAAAGCCACAAGCAGATCAGAAGTCTGGAGGATCAAATAGCCAAAAGTCTGGATTGCTTCCCAACTATCCACCTCGTGTTGGATATGGCTTTGTTGGGGGGCCTTATGGTGCTGTAAATGCAGGATATGGTGCTTCTGGTTTTGGTCAGCCGTTGATATATGGAAGAGGACCAACTCCTGCTGGTATGGCAATGATGCCGATGTTGCTTCCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGATCACAGATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGCAATGGTGGCGGAAGTGGCAGTAAGAATGGCGGCAGTTCTAGCAGGGGGAGGCATACACATGACAACAGTAGCCATGGTCGCAGGTTGCCTCTCCCTCCGCCTAACATCGTGATCATAGAGTCTTCCTACCTAATTTATGGGCTGCTTTGTAATGTGGTGGTACCTTTATCTAGAATGCCCGAACAACTACGCAGTGGACTCGCCGTGCAACCAAGCCGATCAATCCCCGACTCTCGCCCTCAGCGGAATCAAAAAACTCTCTTCCTTTTTCGACAATTGAGACGGGAGAGAGGATTTCTTCCTTGA

Coding sequence (CDS)

ATGGCTGTCTGTAAGAGCCTCCACCCCATCTTTGAGAACCCATTGCCTGAAAATCAAACCCTTCTCGAGTCACTCACGTCCTCATGGACCCACAACGTTAAGCCTGTGGAGCAGAGTCTGCAACTCTGCACAGAGGGGTTGGGGTCAGAAAGCTCGGATGATGTTGAAAATGAAAATTGGGAAATCAAAGAAGGGAAAGTGGGGATTGGTTGTGTCAAGCATGTTGCATCACGGATGAGTACCAAAGCTTTGCCTCCGCCTTTGTCTTTCATGGGAAGGAGTGGAAAGGGTGGGGTTTGCTTCATGTCGTACAGGGAAGATGGAAGGTTGGTGTTGAAAGAAGTAAGAATTGGGTGTCGGGAATTTGTAGAAGCTCGCAGAGAGGATGGGCGGCTGAAGCTGCAAATTGTTCAACCCAATGAGGAAGATGAAGATGAAGATGAAGAGGCAGAGGAAGATGAAGAACATGATGATGTAGAAGCAGAGACACCCTCGTCCTTTGTTGTCTCACAATTTCGGCAGAGTTCTTCTCTAAGTAGTTTCGCTGAGTTTTCGCAGAGAGCGTCTTTGGGTTTACACAGATTGACAAATAAGATGCCAAGTGGAAAAGGAAATGCTTCATCTATTGCTAGACCAGTTGAACCTGAGAAGCAAAATGAATCCGAAAAGCCAGTTGACTCTGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTCGAGTATGAAGAAGTAGAGGAGGAGGAAGAGGTGGAAGAAATAGAAGTTGAAGAAGAGGAGGAAGAGGAGGAGGAAGAGGAGGGTGAGGAAGAAGATGTTGAAGAAGTGGAGGATGATGGGAATAATGACAATAGAATTAATGGCCAAAATGAAATTGATAATGATGAGGATGAAAAGAAAAAACATGCCGAGCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATGTTGGTGGTATTCCTCACGATTCTTCTGAAGAAGATTTAAGGCAATTTTGTGAACCCATAGGAGAAGTTACAGAGGTTCGCGTTATGAGAAGTAAAGAATCAAATGAGAATAAGGGCTTTGCATTTGTTACCTACAGAAGCGTAGAGTTGGCTTCTAAAGCAATTGATGAGCTGAATAACACCGAATTCAAGGGAAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCATCGTTTGTTCATTGGTAATGTCCCCAGGAGCTGGGGCGAGGAAGATCTTAAGAAGGTTGTGAAAGACATTGGACCTGGAGTTACGGCTGTGGAACTAGTAAAGGATATGAAGAATACTAGCAATAACAGGGGTTTTGCTTTTGTTGACTACTATAATCATGCATGTGCTGAGTACTCACGGCAGAAGATGATGAATCCAACATTTAAGCTAGATGATAATGCTCCAACTGTTAGCTGGGCAGACCCTAAAAATGCTGATTCATCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTAAAAAGGCTATTTGATCATCATGGGAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAAGCTGGACAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGATCCAGTGCTATGAAGGCTTTAAAAAATACTGAAAAATATGAATTGGATGGTCAACTTTTGGAATGTTCTCTTGCAAAGCCACAAGCAGATCAGAAGTCTGGAGGATCAAATAGCCAAAAGTCTGGATTGCTTCCCAACTATCCACCTCGTGTTGGATATGGCTTTGTTGGGGGGCCTTATGGTGCTGTAAATGCAGGATATGGTGCTTCTGGTTTTGGTCAGCCGTTGATATATGGAAGAGGACCAACTCCTGCTGGTATGGCAATGATGCCGATGTTGCTTCCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGATCACAGATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGCAATGGTGGCGGAAGTGGCAGTAAGAATGGCGGCAGTTCTAGCAGGGGGAGGCATACACATGACAACAGTAGCCATGGTCGCAGGTTGCCTCTCCCTCCGCCTAACATCGTGATCATAGAGTCTTCCTACCTAATTTATGGGCTGCTTTGTAATGTGGTGGTACCTTTATCTAGAATGCCCGAACAACTACGCAGTGGACTCGCCGTGCAACCAAGCCGATCAATCCCCGACTCTCGCCCTCAGCGGAATCAAAAAACTCTCTTCCTTTTTCGACAATTGAGACGGGAGAGAGGATTTCTTCCTTGA

Protein sequence

MAVCKSLHPIFENPLPENQTLLESLTSSWTHNVKPVEQSLQLCTEGLGSESSDDVENENWEIKEGKVGIGCVKHVASRMSTKALPPPLSFMGRSGKGGVCFMSYREDGRLVLKEVRIGCREFVEARREDGRLKLQIVQPNEEDEDEDEEAEEDEEHDDVEAETPSSFVVSQFRQSSSLSSFAEFSQRASLGLHRLTNKMPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRRLPLPPPNIVIIESSYLIYGLLCNVVVPLSRMPEQLRSGLAVQPSRSIPDSRPQRNQKTLFLFRQLRRERGFLP

Homology

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BLAST of CmoCh20G001770 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.3e-116
Identity = 256/495 (51.72%), Postives = 346/495 (69.90%), Query Frame = 0


Query: 226 DSDERVDLDVDNDPE---EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEE-------G 285
           D+D+RVD +  +  E   EV EE VE  E EEEE+ ++ +V  +  EE E E       G
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 286 EEEDVEE--VEDDGNNDNRINGQNEIDN-------DEDEKKKHAELLALPPHGSEVYVGG 345
           + EDV+E   EDD   DN I+ +   D+       D+++++K++ LL+LPPHGSEV++GG
Sbjct: 66  DMEDVQEEIAEDD---DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGG 125

Query: 346 IPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEF 405
           +P D  EEDLR  CE IGE+ EVR+M+ ++S ++KG+AFV +++ ++A KAI+EL++ EF
Sbjct: 126 LPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEF 185

Query: 406 KGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFA 465
           KGK I+CS S+ K+RLFIGN+P++W E++ +KV++D+GPGV  +EL+KD  NT+ NRGFA
Sbjct: 186 KGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFA 245

Query: 466 FVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKN 525
           FV YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N
Sbjct: 246 FVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPEN 305

Query: 526 VTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQL 585
            + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ 
Sbjct: 306 TSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQP 365

Query: 586 LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGPYGAVNAGYGASG-FGQP 645
           LE  LAKPQA++K   S S   G  P   P V     GF   PYGA+ AG G +G F QP
Sbjct: 366 LEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQP 425

Query: 646 LIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGNGGGSGSKNGGSS 695
           +IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GS   +GGS 
Sbjct: 426 MIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGS---SGGSG 485

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BLAST of CmoCh20G001770 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.5e-35
Identity = 126/432 (29.17%), Postives = 203/432 (46.99%), Query Frame = 0


Query: 316 PPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELAS 375
           P  G+EV+VG IP D  E++L    E  G + ++R+M    S +N+G+AF+T+   E A 
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 376 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVK 435
           +A+   ++ E + GK +    S A +RLF+G++P++  +E++ +    +  G+  V L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 436 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADP-KNADSSAASQV 495
              +   NRGF F++Y +H  A  +R+++M+   K+  N  TV WADP +  D    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 496 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALK 555
           K ++V+NL   VT+E L++ F   GK+ +V        ++     FVHF +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 556 NTEKYELDGQLLECSLAKP---QADQKSGGSNSQKSGLLPNY----PPRV---------- 615
                E++G+ +E  LAKP   +  ++     + +S    +Y    PPR+          
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 616 ----GYGFV----------------------GG---PYGAVNAGYGASGFGQPLIYGRG- 675
               GYG+                       GG   PY   + GY   G G     GRG 
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGG----GRGG 520

Query: 676 ----PTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGSSSRG 695
               P P G    P   P GR GY   Q G+ +   PP    GG GG +  + G  S   
Sbjct: 521 RGAPPPPRGRGAPP---PRGRAGY--SQRGAPL--GPPRGSRGGRGGPAQQQRGRGSRGS 573

[Close]

BLAST of CmoCh20G001770 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-34
Identity = 120/393 (30.53%), Postives = 189/393 (48.09%), Query Frame = 0


Query: 316 PPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELAS 375
           P  G+E++VG IP D  E++L    E  G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 376 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVK 435
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 436 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADP-KNADSSAASQV 495
              +   NRGF F++Y +H  A  +R+++M+   K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 496 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALK 555
           K ++V+NL   VT+E L++ F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 556 NTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 615
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 616 --RVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQ--Q 675
             R GYG+    YG  +  Y   G+      G    P        +   GR G   +   
Sbjct: 458 GGRGGYGYPPDYYGYEDY-YDYYGYDYHNYRGGYEDPYYGYEDFQVGARGRGGRGARGAA 517

Query: 676 PGSQMLTPPPHPRSG-GNGGGSGSKNGGSSSRG 683
           P       PP  R+G    GG GS  G   +RG
Sbjct: 518 PSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG 540

[Close]

BLAST of CmoCh20G001770 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 8.0e-34
Identity = 120/393 (30.53%), Postives = 189/393 (48.09%), Query Frame = 0


Query: 316 PPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELAS 375
           P  G+E++VG IP D  E++L    E  G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 376 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVK 435
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 436 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADP-KNADSSAASQV 495
              +   NRGF F++Y +H  A  +R+++M+   K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 496 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALK 555
           K ++V+NL   VT+E L++ F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 556 NTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 615
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 616 --RVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQ--Q 675
             R GYG+    YG  +  Y   G+      G    P        +   GR G   +   
Sbjct: 458 GGRGGYGYPPDYYGYEDY-YDYYGYDYHNYRGGYEDPYYGYEDFQVGARGRGGRGARGAA 517

Query: 676 PGSQMLTPPPHPRSG-GNGGGSGSKNGGSSSRG 683
           P       PP  R+G    GG GS  G   +RG
Sbjct: 518 PSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG 540

[Close]

BLAST of CmoCh20G001770 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.0e-34
Identity = 120/393 (30.53%), Postives = 189/393 (48.09%), Query Frame = 0


Query: 316 PPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELAS 375
           P  G+E++VG IP D  E++L    E  G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 376 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVK 435
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 436 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADP-KNADSSAASQV 495
              +   NRGF F++Y +H  A  +R+++M+   K+  N  TV WADP ++ D    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 496 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALK 555
           K ++V+NL   VT+E L++ F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 556 NTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 615
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 308 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 367

Query: 616 --RVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQ--Q 675
             R GYG+    YG  +  Y   G+      G    P        +   GR G   +   
Sbjct: 368 GGRGGYGYPPDYYGYEDY-YDYYGYDYHNYRGGYEDPYYGYEDFQVGARGRGGRGARGAA 427

Query: 676 PGSQMLTPPPHPRSG-GNGGGSGSKNGGSSSRG 683
           P       PP  R+G    GG GS  G   +RG
Sbjct: 428 PSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG 450

[Close]

BLAST of CmoCh20G001770 vs. ExPASy TrEMBL
Match: A0A6J1FY14 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111448867 PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 3.4e-269
Identity = 496/496 (100.00%), Postives = 496/496 (100.00%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 259 EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH 318
           EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH
Sbjct: 61  EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH 120

Query: 319 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 378
           GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI
Sbjct: 121 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 180

Query: 379 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 438
           DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN
Sbjct: 181 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 240

Query: 439 TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV 498
           TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV
Sbjct: 241 TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV 300

Query: 499 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 558
           KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY
Sbjct: 301 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 360

Query: 559 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 618
           ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG
Sbjct: 361 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 420

Query: 619 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 678
           QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS
Sbjct: 421 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 480

Query: 679 SSRGRHTHDNSSHGRR 695
           SSRGRHTHDNSSHGRR
Sbjct: 481 SSRGRHTHDNSSHGRR 496

[Close]

BLAST of CmoCh20G001770 vs. ExPASy TrEMBL
Match: A0A6J1J6P3 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111483958 PE=4 SV=1)

HSP 1 Score: 930.6 bits (2404), Expect = 4.1e-267
Identity = 491/496 (98.99%), Postives = 494/496 (99.60%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 259 EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH 318
           EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELL+LPPH
Sbjct: 61  EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLSLPPH 120

Query: 319 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 378
           GSEVYVGGIPHDSSEEDLR FCEPIGEVTEVR+MR+KESNENKGFAFVTYRSVELASKAI
Sbjct: 121 GSEVYVGGIPHDSSEEDLRHFCEPIGEVTEVRIMRNKESNENKGFAFVTYRSVELASKAI 180

Query: 379 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 438
           DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN
Sbjct: 181 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 240

Query: 439 TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV 498
           TSNNRGFAFVDYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAASQVKAVYV
Sbjct: 241 TSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAVYV 300

Query: 499 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 558
           KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY
Sbjct: 301 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 360

Query: 559 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 618
           ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG
Sbjct: 361 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 420

Query: 619 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 678
           QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS
Sbjct: 421 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 480

Query: 679 SSRGRHTHDNSSHGRR 695
           SSRGRHTHDNSSHGRR
Sbjct: 481 SSRGRHTHDNSSHGRR 496

[Close]

BLAST of CmoCh20G001770 vs. ExPASy TrEMBL
Match: A0A1S3BMC2 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 2.6e-245
Identity = 464/500 (92.80%), Postives = 476/500 (95.20%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MP GKGNASS ARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 259 EEIE--VEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALP 318
           EEIE   EEEEEEEEEEEG+EEDVEEVEDDG N+N IN QNE  NDEDEKKKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEEEEEGDEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLALP 120

Query: 319 PHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASK 378
           PHGSEVYVGGIP DSSE+DLR+FCE IGEVTEVRVMRSKESNENKGFAFVT+RSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180

Query: 379 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDM 438
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV +IGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240

Query: 439 KNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAV 498
           KNTSNNRGFAF+DYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 499 YVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTE 558
           YVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 559 KYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASG 618
           KYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVNAGYGASG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGASG 420

Query: 619 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRS----GGNGGGSG 678
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRS    GG+GGGSG
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSGGGSG 480

Query: 679 SKNGGSSSRGRHTHDNSSHG 693
           SKN GSSSRGRH+HD S HG
Sbjct: 481 SKNSGSSSRGRHSHD-SGHG 499

[Close]

BLAST of CmoCh20G001770 vs. ExPASy TrEMBL
Match: A0A0A0KI54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 2.6e-245
Identity = 464/509 (91.16%), Postives = 477/509 (93.71%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MP GKGNASS ARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 259 EEIE--VEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALP 318
           EEIE   EEEEEEE+EEEG+EEDVEEVEDDG NDN IN QNE  NDEDE KKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120

Query: 319 PHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASK 378
           PHGSEVYVGGIP DSSE+DLR+FCE IGEVTEVRVMRSKESNENKGFAFVT+RSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180

Query: 379 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDM 438
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV +IGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240

Query: 439 KNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAV 498
           KNTSNNRGFAF+DYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 499 YVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTE 558
           YVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 559 KYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASG 618
           KYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVNAGYG SG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420

Query: 619 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR-----SGGNGGGS 678
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR     SGG+GGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480

Query: 679 GSKNGGSSSRGRHTHD------NSSHGRR 695
           GSKNGGSSSRGRH+HD      +  HGRR
Sbjct: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRR 509

[Close]

BLAST of CmoCh20G001770 vs. ExPASy TrEMBL
Match: A0A6J1DHV9 (heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC111020649 PE=4 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 2.4e-243
Identity = 461/505 (91.29%), Postives = 474/505 (93.86%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MP GKGNASS ARPVEPEKQNESEKPVDSDERVDLDVDNDPEE MEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEETMEEDVEYEEVEEEEEV 60

Query: 259 EEI--------EVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHA 318
           EEI        E EEEEEEEEEEEGEEEDVEEVED GNNDN  + QNEI NDEDEKK+HA
Sbjct: 61  EEIEEVEEEEEEEEEEEEEEEEEEGEEEDVEEVEDGGNNDNGNDAQNEIGNDEDEKKRHA 120

Query: 319 ELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRS 378
           ELLALPPHGSEVY+GGIP DSSEEDLR FC  IGEVTEVR+MRSK+SNENKGF+FVTY+S
Sbjct: 121 ELLALPPHGSEVYIGGIPQDSSEEDLRSFCASIGEVTEVRIMRSKDSNENKGFSFVTYKS 180

Query: 379 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAV 438
           VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVV DIGPGVTAV
Sbjct: 181 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV 240

Query: 439 ELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAA 498
           ELVKDMKNTSNNRGFAF+DYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAA
Sbjct: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300

Query: 499 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMK 558
           SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAK+GQEKNRIGFVHF+ERSSAMK
Sbjct: 301 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMK 360

Query: 559 ALKNTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPY-GAVN 618
           ALKNTEKYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYG+VGG Y GAVN
Sbjct: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGYVGGAYGGAVN 420

Query: 619 AGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGG 678
           AGYGAS F QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSG  GG
Sbjct: 421 AGYGASSFSQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSG--GG 480

Query: 679 GSGSKNGGSSSRGRHTHDNSSHGRR 695
           GSGSKNGGSSSRGRHTHD S HGRR
Sbjct: 481 GSGSKNGGSSSRGRHTHD-SGHGRR 502

[Close]

BLAST of CmoCh20G001770 vs. NCBI nr
Match: KAG7010343.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 654/694 (94.24%), Postives = 654/694 (94.24%), Query Frame = 0


Query: 1   MAVCKSLHPIFENPLPENQTLLESLTSSWTHNVKPVEQSLQLCTEGLGSESSDDVENENW 60
           MAVCKSLHPIFENPLPENQTLLESLTSSWTHNVKPVEQSLQLCTEGLGSESSDDVENENW
Sbjct: 1   MAVCKSLHPIFENPLPENQTLLESLTSSWTHNVKPVEQSLQLCTEGLGSESSDDVENENW 60

Query: 61  EIKEGKVGIGCVKHVASRMSTKALPPPLSFMGRSGKGGVCFMSYREDGRLVLKEVRIGCR 120
           EIKEGKVGIGCVKHVASRMSTKALPPPLSFMGRSGKGGVCFMSYREDGRLVLKEVRIGCR
Sbjct: 61  EIKEGKVGIGCVKHVASRMSTKALPPPLSFMGRSGKGGVCFMSYREDGRLVLKEVRIGCR 120

Query: 121 EFVEARREDGRLKLQIVQPNEEDEDEDEEAEEDEEHDDVEAETPSSFVVSQFRQSSSLSS 180
           EFVEARREDGRLKLQIVQPNE  E EDEEAEEDEEHDD                      
Sbjct: 121 EFVEARREDGRLKLQIVQPNE--EYEDEEAEEDEEHDD---------------------- 180

Query: 181 FAEFSQRASLGLHRLTNKMPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPE 240
                          TNKMPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPE
Sbjct: 181 ---------------TNKMPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPE 240

Query: 241 EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEID 300
           EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEID
Sbjct: 241 EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEID 300

Query: 301 NDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNEN 360
           NDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNEN
Sbjct: 301 NDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNEN 360

Query: 361 KGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV 420
           KGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV
Sbjct: 361 KGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV 420

Query: 421 KDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWA 480
           KDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWA
Sbjct: 421 KDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWA 480

Query: 481 DPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFV 540
           DPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFV
Sbjct: 481 DPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFV 540

Query: 541 HFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGF 600
           HFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGF
Sbjct: 541 HFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGF 600

Query: 601 VGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPP 660
           VGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPP
Sbjct: 601 VGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPP 655

Query: 661 HPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRR 695
           HPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRR
Sbjct: 661 HPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRR 655

[Close]

BLAST of CmoCh20G001770 vs. NCBI nr
Match: KAG6605979.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1014.6 bits (2622), Expect = 4.5e-292
Identity = 573/689 (83.16%), Postives = 602/689 (87.37%), Query Frame = 0


Query: 38  QSLQLCTEGLGSESSDDVE-------NENWEIKEGKVGIGCVKHVAS----------RMS 97
           +SLQ CTEGLGSESSDDVE       NENW+IKE KV   CVKHVAS          RMS
Sbjct: 19  ESLQFCTEGLGSESSDDVEDLQSDMINENWQIKEDKVVSTCVKHVASGASSGELRRPRMS 78

Query: 98  TKALPPPLSFMGRSGKGGVCFMSYREDGRLVLKEVRIGCREFVEARREDGRLKLQIVQPN 157
             A PPPLSF+GRSGK GVCF SYR++GR VLKEVRI  +EF++ RRE GRLKLQ VQPN
Sbjct: 79  RGAFPPPLSFIGRSGKAGVCFTSYRQNGRFVLKEVRIPTQEFLQTRREHGRLKLQFVQPN 138

Query: 158 E--EDEDEDEEAEEDEEHDDVEAETPSS---FVVSQFRQSS----SLSSFAEFSQRASLG 217
               +EDE+EEA+E EEHD VE E       F  S F   S    SLSS  +FSQ+ASLG
Sbjct: 139 HYAHEEDEEEEADE-EEHDAVEDEHDGGSNIFYDSSFEALSFGRVSLSSLDKFSQKASLG 198

Query: 218 LHRLTNKMPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEE 277
           +HRLTNKMP GKGNASS ARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEE
Sbjct: 199 VHRLTNKMPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEE 258

Query: 278 VEEEEEVEEI-EVEEEEEEE-EEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKH 337
           VEEEEEVEEI EVEEEEEEE EEEE EEEDVE VED GNNDN IN QNE   DEDEKKKH
Sbjct: 259 VEEEEEVEEIEEVEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKH 318

Query: 338 AELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYR 397
            ELLALPPHGSEVY+GGIP D+SEEDLR FC  IGEVTEVR+M+SK+SNENKGFAFVTY+
Sbjct: 319 DELLALPPHGSEVYIGGIPQDTSEEDLRSFCASIGEVTEVRIMKSKDSNENKGFAFVTYK 378

Query: 398 SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTA 457
           SVELASKAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDL+KVV DIGPGVTA
Sbjct: 379 SVELASKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTA 438

Query: 458 VELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSA 517
           VELVKDMKNTSNNRGFAF+DYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSA
Sbjct: 439 VELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA 498

Query: 518 ASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAM 577
           ASQVKAVYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAM
Sbjct: 499 ASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAM 558

Query: 578 KALKNTEKYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVN 637
           KALKNTEKYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVN
Sbjct: 559 KALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVN 618

Query: 638 AGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSG---G 695
            GYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSG   G
Sbjct: 619 PGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSG 678

[Close]

BLAST of CmoCh20G001770 vs. NCBI nr
Match: KAG6570475.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 979.2 bits (2530), Expect = 2.1e-281
Identity = 523/531 (98.49%), Postives = 526/531 (99.06%), Query Frame = 0


Query: 164 PSSFVVSQFRQSSSLSSFAEFSQRASLGLHRLTNKMPSGKGNASSIARPVEPEKQNESEK 223
           PSS  + +  +SSSLSSFAEFSQRASLGLHRLTNKMPSGKGNASSIARPVEPEKQNESEK
Sbjct: 18  PSS--LKEESRSSSLSSFAEFSQRASLGLHRLTNKMPSGKGNASSIARPVEPEKQNESEK 77

Query: 224 PVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEV 283
           PVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEV
Sbjct: 78  PVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEEDVEEV 137

Query: 284 EDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPI 343
           EDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPI
Sbjct: 138 EDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQFCEPI 197

Query: 344 GEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLF 403
           GEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLF
Sbjct: 198 GEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLF 257

Query: 404 IGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKM 463
           IGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKM
Sbjct: 258 IGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKM 317

Query: 464 MNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKV 523
           MNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKV
Sbjct: 318 MNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKV 377

Query: 524 VLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNS 583
           VLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNS
Sbjct: 378 VLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQKSGGSNS 437

Query: 584 QKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGR 643
           QKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGR
Sbjct: 438 QKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGR 497

Query: 644 IGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRR 695
           IGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRR
Sbjct: 498 IGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGSSSRGRHTHDNSSHGRR 546

[Close]

BLAST of CmoCh20G001770 vs. NCBI nr
Match: XP_022944413.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata])

HSP 1 Score: 937.6 bits (2422), Expect = 7.0e-269
Identity = 496/496 (100.00%), Postives = 496/496 (100.00%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 259 EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH 318
           EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH
Sbjct: 61  EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH 120

Query: 319 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 378
           GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI
Sbjct: 121 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 180

Query: 379 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 438
           DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN
Sbjct: 181 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 240

Query: 439 TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV 498
           TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV
Sbjct: 241 TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV 300

Query: 499 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 558
           KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY
Sbjct: 301 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 360

Query: 559 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 618
           ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG
Sbjct: 361 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 420

Query: 619 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 678
           QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS
Sbjct: 421 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 480

Query: 679 SSRGRHTHDNSSHGRR 695
           SSRGRHTHDNSSHGRR
Sbjct: 481 SSRGRHTHDNSSHGRR 496

[Close]

BLAST of CmoCh20G001770 vs. NCBI nr
Match: XP_023513235.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023513236.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 932.2 bits (2408), Expect = 2.9e-267
Identity = 493/496 (99.40%), Postives = 495/496 (99.80%), Query Frame = 0


Query: 199 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 258
           MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 259 EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPH 318
           EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNND+RINGQNEIDNDEDEKKKHAELLALPPH
Sbjct: 61  EEIEVEEEEEEEEEEEGEEEDVEEVEDDGNNDSRINGQNEIDNDEDEKKKHAELLALPPH 120

Query: 319 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 378
           GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI
Sbjct: 121 GSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAI 180

Query: 379 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 438
           DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN
Sbjct: 181 DELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKN 240

Query: 439 TSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAVYV 498
           TSNNRGFAFVDYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAASQVKAVYV
Sbjct: 241 TSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAVYV 300

Query: 499 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 558
           KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY
Sbjct: 301 KNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKY 360

Query: 559 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 618
           ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG
Sbjct: 361 ELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFG 420

Query: 619 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 678
           QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS
Sbjct: 421 QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGNGGGSGSKNGGS 480

Query: 679 SSRGRHTHDNSSHGRR 695
           SSRGRHTHDN+SHGRR
Sbjct: 481 SSRGRHTHDNNSHGRR 496

[Close]

BLAST of CmoCh20G001770 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 513.8 bits (1322), Expect = 2.3e-145
Identity = 288/480 (60.00%), Postives = 366/480 (76.25%), Query Frame = 0


Query: 219 NESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEE 278
           +E+   ++S+ERVDLD DNDPEE++EE+VEYEEV EEEE+EEIE E EEE E EEE EEE
Sbjct: 9   SEAHDSMESEERVDLDGDNDPEEILEEEVEYEEV-EEEEIEEIEEEIEEEVEVEEEEEEE 68

Query: 279 DVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQ 338
           D    E                 +E+EKK+H ELLALPPHGSEVY+GGIP D++E DL+ 
Sbjct: 69  DAVATE-----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKG 128

Query: 339 FCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQA 398
           FC  IGEVTEVR+MR K+S + KG+AFVT+RS +LA++AID LNNT+F+GK+IKCS++QA
Sbjct: 129 FCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQA 188

Query: 399 KHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEY 458
           KHRLF+GNVPR+W E D+KK    IGPGV  VEL K+ +N   NRGFAF++YYNHACAEY
Sbjct: 189 KHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEY 248

Query: 459 SRQKMMNPTFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKNVTQEQLKRLFDH 518
           S+QKM NP+FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+++TQE+LK LF+H
Sbjct: 249 SKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEH 308

Query: 519 HGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQ 578
           HGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQADQ
Sbjct: 309 HGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQ 368

Query: 579 KSGGS---NSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMA 638
           K+  +   N QKS L PNYPP + YG    P+GA+  G+GAS + QPL++  G    GM+
Sbjct: 369 KTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGAL-GGFGASAYSQPLMHAGGHAAGGMS 428

Query: 639 MMPMLLPDGRIGYVLQQPG-SQMLTPPPH---PRSGGNG--GGSGSKNGGSSSRGRHTHD 688
           MMP++LPDGRIGYVLQQPG + M  PPP    P  GG+G    SGSK    + RGR  ++
Sbjct: 429 MMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRSRYN 469

[Close]

BLAST of CmoCh20G001770 vs. TAIR 10
Match: AT3G52660.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 513.8 bits (1322), Expect = 2.3e-145
Identity = 288/480 (60.00%), Postives = 366/480 (76.25%), Query Frame = 0


Query: 219 NESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEEGEEE 278
           +E+   ++S+ERVDLD DNDPEE++EE+VEYEEV EEEE+EEIE E EEE E EEE EEE
Sbjct: 9   SEAHDSMESEERVDLDGDNDPEEILEEEVEYEEV-EEEEIEEIEEEIEEEVEVEEEEEEE 68

Query: 279 DVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALPPHGSEVYVGGIPHDSSEEDLRQ 338
           D    E                 +E+EKK+H ELLALPPHGSEVY+GGIP D++E DL+ 
Sbjct: 69  DAVATE-----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKG 128

Query: 339 FCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEFKGKKIKCSSSQA 398
           FC  IGEVTEVR+MR K+S + KG+AFVT+RS +LA++AID LNNT+F+GK+IKCS++QA
Sbjct: 129 FCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQA 188

Query: 399 KHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEY 458
           KHRLF+GNVPR+W E D+KK    IGPGV  VEL K+ +N   NRGFAF++YYNHACAEY
Sbjct: 189 KHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEY 248

Query: 459 SRQKMMNPTFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKNVTQEQLKRLFDH 518
           S+QKM NP+FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+++TQE+LK LF+H
Sbjct: 249 SKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEH 308

Query: 519 HGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQLLECSLAKPQADQ 578
           HGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQADQ
Sbjct: 309 HGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQ 368

Query: 579 KSGGS---NSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASGFGQPLIYGRGPTPAGMA 638
           K+  +   N QKS L PNYPP + YG    P+GA+  G+GAS + QPL++  G    GM+
Sbjct: 369 KTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGAL-GGFGASAYSQPLMHAGGHAAGGMS 428

Query: 639 MMPMLLPDGRIGYVLQQPG-SQMLTPPPH---PRSGGNG--GGSGSKNGGSSSRGRHTHD 688
           MMP++LPDGRIGYVLQQPG + M  PPP    P  GG+G    SGSK    + RGR  ++
Sbjct: 429 MMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRSRYN 469

[Close]

BLAST of CmoCh20G001770 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 5.9e-117
Identity = 256/495 (51.72%), Postives = 346/495 (69.90%), Query Frame = 0


Query: 226 DSDERVDLDVDNDPE---EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEE-------G 285
           D+D+RVD +  +  E   EV EE VE  E EEEE+ ++ +V  +  EE E E       G
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 286 EEEDVEE--VEDDGNNDNRINGQNEIDN-------DEDEKKKHAELLALPPHGSEVYVGG 345
           + EDV+E   EDD   DN I+ +   D+       D+++++K++ LL+LPPHGSEV++GG
Sbjct: 66  DMEDVQEEIAEDD---DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGG 125

Query: 346 IPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEF 405
           +P D  EEDLR  CE IGE+ EVR+M+ ++S ++KG+AFV +++ ++A KAI+EL++ EF
Sbjct: 126 LPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEF 185

Query: 406 KGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFA 465
           KGK I+CS S+ K+RLFIGN+P++W E++ +KV++D+GPGV  +EL+KD  NT+ NRGFA
Sbjct: 186 KGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFA 245

Query: 466 FVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKN 525
           FV YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N
Sbjct: 246 FVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPEN 305

Query: 526 VTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQL 585
            + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ 
Sbjct: 306 TSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQP 365

Query: 586 LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGPYGAVNAGYGASG-FGQP 645
           LE  LAKPQA++K   S S   G  P   P V     GF   PYGA+ AG G +G F QP
Sbjct: 366 LEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQP 425

Query: 646 LIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGNGGGSGSKNGGSS 695
           +IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GS   +GGS 
Sbjct: 426 MIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGS---SGGSG 485

[Close]

BLAST of CmoCh20G001770 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 5.9e-117
Identity = 256/495 (51.72%), Postives = 346/495 (69.90%), Query Frame = 0


Query: 226 DSDERVDLDVDNDPE---EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEE-------G 285
           D+D+RVD +  +  E   EV EE VE  E EEEE+ ++ +V  +  EE E E       G
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 286 EEEDVEE--VEDDGNNDNRINGQNEIDN-------DEDEKKKHAELLALPPHGSEVYVGG 345
           + EDV+E   EDD   DN I+ +   D+       D+++++K++ LL+LPPHGSEV++GG
Sbjct: 66  DMEDVQEEIAEDD---DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGG 125

Query: 346 IPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEF 405
           +P D  EEDLR  CE IGE+ EVR+M+ ++S ++KG+AFV +++ ++A KAI+EL++ EF
Sbjct: 126 LPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEF 185

Query: 406 KGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFA 465
           KGK I+CS S+ K+RLFIGN+P++W E++ +KV++D+GPGV  +EL+KD  NT+ NRGFA
Sbjct: 186 KGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFA 245

Query: 466 FVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKN 525
           FV YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N
Sbjct: 246 FVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPEN 305

Query: 526 VTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQL 585
            + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ 
Sbjct: 306 TSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQP 365

Query: 586 LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGPYGAVNAGYGASG-FGQP 645
           LE  LAKPQA++K   S S   G  P   P V     GF   PYGA+ AG G +G F QP
Sbjct: 366 LEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQP 425

Query: 646 LIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGNGGGSGSKNGGSS 695
           +IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GS   +GGS 
Sbjct: 426 MIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGS---SGGSG 485

[Close]

BLAST of CmoCh20G001770 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 402.9 bits (1034), Expect = 5.7e-112
Identity = 250/495 (50.51%), Postives = 338/495 (68.28%), Query Frame = 0


Query: 226 DSDERVDLDVDNDPE---EVMEEDVEYEEVEEEEEVEEIEVEEEEEEEEEEE-------G 285
           D+D+RVD +  +  E   EV EE VE  E EEEE+ ++ +V  +  EE E E       G
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 286 EEEDVEE--VEDDGNNDNRINGQNEIDN-------DEDEKKKHAELLALPPHGSEVYVGG 345
           + EDV+E   EDD   DN I+ +   D+       D+++++K++ LL+LPPHGSEV++GG
Sbjct: 66  DMEDVQEEIAEDD---DNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGG 125

Query: 346 IPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASKAIDELNNTEF 405
           +P D  EEDLR  CE IGE+ EVR+M+ ++S ++KG+AFV +++ ++A KAI+EL++ EF
Sbjct: 126 LPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEF 185

Query: 406 KGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDMKNTSNNRGFA 465
           K       S    +RLFIGN+P++W E++ +KV++D+GPGV  +EL+KD  NT+ NRGFA
Sbjct: 186 KASSTANCSLSLSNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFA 245

Query: 466 FVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKN 525
           FV YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N
Sbjct: 246 FVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPEN 305

Query: 526 VTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQL 585
            + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ 
Sbjct: 306 TSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQP 365

Query: 586 LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGPYGAVNAGYGASG-FGQP 645
           LE  LAKPQA++K   S S   G  P   P V     GF   PYGA+ AG G +G F QP
Sbjct: 366 LEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQP 425

Query: 646 LIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGNGGGSGSKNGGSS 695
           +IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GS   +GGS 
Sbjct: 426 MIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGS---SGGSG 485

The following BLAST results are available for this feature:

BLAST of CmoCh20G001770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	8.3e-116	51.72	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O43390	2.5e-35	29.17	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]
O60506	6.1e-34	30.53	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	8.0e-34	30.53	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	8.0e-34	30.53	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]

BLAST of CmoCh20G001770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY14	3.4e-269	100.00	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J6P3	4.1e-267	98.99	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3BMC2	2.6e-245	92.80	nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1	[more]
A0A0A0KI54	2.6e-245	91.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1	[more]
A0A6J1DHV9	2.4e-243	91.29	heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CmoCh20G001770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010343.1	0.0e+00	94.24	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
KAG6605979.1	4.5e-292	83.16	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
KAG6570475.1	2.1e-281	98.49	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
XP_022944413.1	7.0e-269	100.00	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata]	[more]
XP_023513235.1	2.9e-267	99.40	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_...	[more]

BLAST of CmoCh20G001770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52660.1	2.3e-145	60.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.2	2.3e-145	60.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.1	5.9e-117	51.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	5.9e-117	51.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	5.7e-112	50.51	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 244..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 650..697
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..589
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 571..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..230
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 199..672
None	No IPR available	PANTHER	PTHR10352:SF41	RNA RECOGNITION MOTIF	coord: 199..672
None	No IPR available	CDD	cd00590	RRM_SF	coord: 322..394 e-value: 5.09583E-23 score: 91.2125
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 401..478 e-value: 9.8E-11 score: 51.7 coord: 495..568 e-value: 3.1E-15 score: 66.6 coord: 321..394 e-value: 7.9E-26 score: 101.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 322..392 e-value: 4.2E-20 score: 71.4 coord: 496..565 e-value: 9.9E-15 score: 54.1 coord: 402..465 e-value: 3.0E-10 score: 39.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 494..572 score: 14.999257
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 320..398 score: 18.785557
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 400..482 score: 11.741675
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 321..394 e-value: 5.0E-6 score: 36.0 coord: 495..568 e-value: 1.2 score: 13.3
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 84..135 e-value: 6.2E-15 score: 55.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 245..400 e-value: 9.6E-31 score: 108.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 483..613 e-value: 6.1E-21 score: 76.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 401..481 e-value: 7.5E-21 score: 76.0
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 317..485
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 490..598

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G001770.1	CmoCh20G001770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding