CmoCh20G001350 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G001350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cucumber peeling cupredoxin-like
Location	Cmo_Chr20: 690083 .. 692791 (-)
RNA-Seq Expression	CmoCh20G001350
Synteny	CmoCh20G001350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACTACATATATCCCTCCTGCAGACCCAAAATATCTCTTCAGTGGTTCTAGTTCGCTTCCAATTCGCGAATCCCTAGAAGAATTAATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCGGCTGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTAGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATCAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAAGTAAGCTCTAATTTTCTGTTTTCACTAAGCTCTCTTCCGCTATTCTTTGCTCGCTCTCTCTATTGATTCCTGAATTTGATTCTCGAGTGATCGTTTCACAAACTCTTGAGATTTCGAATTTTGATTTTGATTTTTGATTGATCGCTTCGCAAACTCGAAATTTCGGATCTCTCTCCTCCGTTTTCTGAAAACTCATACGCTTCAAGTGATTTGATTTCCGTCTTCGATTTTATCATTCTGCTCGTTCAAGTTTAGCATCTTTTGGTTTTGAATTGTAAATTTCTCTTGTTTTCGTTTGTTTTTATCGTCTTCCTGAAAATGTGTGGGCCATCTGCTTGCTATATTTTGGTGCTTCCGTCGATCTCTCTAATTTTTGTGTATTTTTCTAAATGAATCGACAACTGTTACCTAGTTAAATGACAATATCGAACAAACTCGACTTTGAGCGTCTCGCTTTAACCTAACTCATATTACATTGATACTATATTTAGCGGCTCTCAATCATAGCTTGAATCCTTGCACCTCATGTAATACAATGTTACAGAAGAACAATAATAATGTGATGACGAGTTCTATTATTAGCATTATTCCAATACGTTATAATGTTTGCATCATGTTGAACCAACCAATTTTTTCATTACTAACAGTTAGTAAGGTCGAGTTTTGAATGTAATTTCGTAAAAGTTAAACTATAAATTTAGTCTTTCCAGTTTTTAAAAATTCACAAATAAAAATCTAGAGTTTCATCCTATTTTAACTTTATATTTTATAAATAAATTCTTTTTTAAGTTTGATTTTTTCTAAACCATTACAATAAATCAATTCACAAATTTGATTGAAAATGTGAAAGAACAAATTCTAAAATTTTAAACATCAAATAAATTACAAATGATTTATAATTTAACATGTTTTAAAATTGAAATGGTAAGTGGAGTCTTCACTTTTTTCATCGTTTTTTTTTTTGTCTGAAAGAGGACCAATAAAATAGGGTTTTTTTTTTCTTTTCTTTTTGGTAAGCTTCCGATAGTAAACGATTAAAAGGAGAAAGTTCAAGAAATAACTCATTATCCAGCCAAAATAAATAAATAAATAAATATGTATATGTATATGTATATATATATAAAAGGCACCAACCGTGCGTACCCCATGTTGTTTCTTTTGGATAATGATTTTGACAGCTAAACGAACATGCCGGTGCCTACTGCCTTGTGTGTTTACTTCTTTCTCCGTCTCTTTTTTAGAAGACTTTCCACCATGCACGCAACTGTGATTCTTGATAATGTAACTTGGAACACGTGTTGGTTGTTAAGAGAAACGTCGGTAGTTTTATGCATGTGATAGACATATCATCCATGTGCCGCCTTCTTGTAAAGCTGTAAACTTTGAAGACCGTAAAACTTTTACTGGTTATTAAATTAGTCGTTATTTTCCTATAATTTTTTTTTAACAGTTAACTAGGTGCAACATGAAGGATTCGTATATTTGACCTTTTCTTCGAGAGTTTATACTTAAATTATTAACTTATTAGCTTCGATATACACTGTTTAGGAATGCACTTGGAATATGTAATATATGCTGGATCAACTGAAAATTTATGGAATTTCAGGGCTGAAAAATAATTCTAGAGATCGTTGTGATGTTCATTTTGCAGTTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCTGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTAGCTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGATTGTATTTTCTTACTTTTGTTTATTTTTTAATTTCATTATTACGGGTTTTCATTTTGCAATAATGTGGGTCTTTTTACTGGGCGTTCAAGTATTAGTACACACGGGTTAGATTATAGGTTTTATTTAGGATTTTCTACCCTCTTTTGTGCATTCATATGTACTGCTAGTGGCACCACTTTATTTACTTATTTCTGTCACTCTCTAGACCATTGTTTGACGACTTAATAATTTTCAGGTTTAAGCTGTATAC

mRNA sequence

TGGACTACATATATCCCTCCTGCAGACCCAAAATATCTCTTCAGTGGTTCTAGTTCGCTTCCAATTCGCGAATCCCTAGAAGAATTAATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCGGCTGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTAGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATCAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCTGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTAGCTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGATTGTATTTTCTTACTTTTGTTTATTTTTTAATTTCATTATTACGGGTTTTCATTTTGCAATAATGTGGGTCTTTTTACTGGGCGTTCAAGTATTAGTACACACGGGTTAGATTATAGGTTTTATTTAGGATTTTCTACCCTCTTTTGTGCATTCATATGTACTGCTAGTGGCACCACTTTATTTACTTATTTCTGTCACTCTCTAGACCATTGTTTGACGACTTAATAATTTTCAGGTTTAAGCTGTATAC

Coding sequence (CDS)

ATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCGGCTGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTAGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATCAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCTGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTAGCTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA

Protein sequence

MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE

Homology

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BLAST of CmoCh20G001350 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 17  VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
           V+L FL  +    V A K YTVG++  W      P ++Y  W  GK+F LGD+L F  D 
Sbjct: 11  VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 77  NHSVVLTYNFTTYKLCDYDDASEHDTTEWS 107
           N   +L  N T Y+ C     ++H    W+
Sbjct: 71  NQHNILEVNKTDYEGC----IADHPIRNWT 90

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BLAST of CmoCh20G001350 vs. ExPASy TrEMBL
Match: A0A6J1FXQ3 (blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448143 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.4e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 239

[Close]

BLAST of CmoCh20G001350 vs. ExPASy TrEMBL
Match: A0A6J1J5H8 (blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111483656 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.4e-126
Identity = 229/239 (95.82%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDY+KWTV
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASE DTTEWSAADPSATTPYAVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSG+YDGEQCQNGQQFKINVTHGQGLPKSMR   DEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR---DEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNP ND ADSDKEVSGSVSLSLH KFNEFFFVL GIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPQNDAADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE 236

[Close]

BLAST of CmoCh20G001350 vs. ExPASy TrEMBL
Match: A0A6J1JXY1 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111490768 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109
Identity = 205/243 (84.36%), Postives = 220/243 (90.53%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLL   FL++L+FLSLSGRS V+AY+NYTVGDSLGWFD+LEKPAVDYQ WTV
Sbjct: 1   MEQRKYRADLLPSPFLLVLIFLSLSGRSLVNAYQNYTVGDSLGWFDELEKPAVDYQNWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GK FSLGDFLIFNTDNNHSVV TYNFTTY LCDYDDASE DTTEWSAADPSATTP+AVTV
Sbjct: 61  GKTFSLGDFLIFNTDNNHSVVQTYNFTTYNLCDYDDASEDDTTEWSAADPSATTPHAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSGHYDGEQCQNGQ FKINVTHGQGLPKS+ DSSDEAPAPVVPD+GD+
Sbjct: 121 AVPLVKEGANYFFSGHYDGEQCQNGQHFKINVTHGQGLPKSLGDSSDEAPAPVVPDSGDR 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSD---KEVSGSVSL-SLHSKFNEFFFVLAGIASACIFL 240
           TESAPDTIVPS+FDNP NDVAD+D   KE SGSVSL SLH KFNEFFF+L G  +ACIFL
Sbjct: 181 TESAPDTIVPSSFDNPRNDVADNDSDKKESSGSVSLMSLHFKFNEFFFLLVG--TACIFL 240

[Close]

BLAST of CmoCh20G001350 vs. ExPASy TrEMBL
Match: A0A6J1H378 (cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111459269 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109
Identity = 204/243 (83.95%), Postives = 220/243 (90.53%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLL   FL++L+FLSLSGRS V+AY+NYTVGDSLGWFD+LEKPAVDYQ WTV
Sbjct: 1   MEQRKYRADLLPSPFLLVLIFLSLSGRSLVNAYQNYTVGDSLGWFDELEKPAVDYQNWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GK FSLGDFLIFNTDNNHSVV TYNFTTY LCDYDDASE DTTEWSAADPSATTP+AVTV
Sbjct: 61  GKTFSLGDFLIFNTDNNHSVVQTYNFTTYNLCDYDDASEDDTTEWSAADPSATTPHAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPL+KEG NYFFSGHYDGEQCQNGQ FKINVTHGQGLPKS+ DSSDEAPAPVVPD+GD+
Sbjct: 121 AVPLVKEGANYFFSGHYDGEQCQNGQHFKINVTHGQGLPKSLGDSSDEAPAPVVPDSGDR 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSD---KEVSGSVSL-SLHSKFNEFFFVLAGIASACIFL 240
           TESAPDTIVPS+FDNP NDVAD+D   KE SGS+SL SLH KFNEFFF+L G  +ACIFL
Sbjct: 181 TESAPDTIVPSSFDNPRNDVADNDSDKKESSGSISLVSLHFKFNEFFFLLVG--TACIFL 240

[Close]

BLAST of CmoCh20G001350 vs. ExPASy TrEMBL
Match: A0A5A7V0S1 (Cucumber peeling cupredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001280 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.5e-108
Identity = 202/236 (85.59%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAF-LVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWT 60
           ME RKY+ D LSPAF L+LLLFLS+SGRSAVHAYKN+TVGDSLGWFDKLEKPAVDYQKWT
Sbjct: 1   MELRKYKPDPLSPAFLLLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWT 60

Query: 61  VGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVT 120
            GK F LGDFLIFNTDNNHSVV TYNFTTYKLCDYDDA E+DTTEWSAADPSATTPYAV 
Sbjct: 61  AGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDAPENDTTEWSAADPSATTPYAVM 120

Query: 121 VAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGD 180
           VAVPL+KEG NYFFSG+YDGEQCQNGQQFKINVTHGQGLPKSM D SDEAPAPVVPDTGD
Sbjct: 121 VAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGD 180

Query: 181 QTESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSL--HSKFNEFFFVLAGIASAC 234
           QTE+APDTIVPS+FDNP NDVAD+DKE S S S+SL    KFNEFFF+L GIASAC
Sbjct: 181 QTEAAPDTIVPSSFDNPRNDVADNDKESSSSNSISLVYCFKFNEFFFLLIGIASAC 236

[Close]

BLAST of CmoCh20G001350 vs. NCBI nr
Match: XP_022943355.1 (blue copper protein-like [Cucurbita moschata])

HSP 1 Score: 485.3 bits (1248), Expect = 2.9e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 239

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BLAST of CmoCh20G001350 vs. NCBI nr
Match: KAG7010311.1 (hypothetical protein SDJN02_27104 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.1 bits (1237), Expect = 5.6e-132
Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKY ADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV
Sbjct: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNPVNDV DSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 239

[Close]

BLAST of CmoCh20G001350 vs. NCBI nr
Match: XP_023512118.1 (uncharacterized protein LOC111776932 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 234/239 (97.91%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLLSPAFLVLLLFL LSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV
Sbjct: 55  MEQRKYRADLLSPAFLVLLLFLFLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 114

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GKNFSLGDFLIFNTDNNHS+VLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV
Sbjct: 115 GKNFSLGDFLIFNTDNNHSIVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 174

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 175 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 234

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNP NDVADSDKEVSGSVSLSLH KFNEFFFVL GIASACIFLCTE
Sbjct: 235 TESAPDTIVPSNFDNPQNDVADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE 293

[Close]

BLAST of CmoCh20G001350 vs. NCBI nr
Match: XP_022985667.1 (blue copper protein-like [Cucurbita maxima])

HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125
Identity = 229/239 (95.82%), Postives = 231/239 (96.65%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDY+KWTV
Sbjct: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYKKWTV 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
           GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASE DTTEWSAADPSATTPYAVTV
Sbjct: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEDDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSG+YDGEQCQNGQQFKINVTHGQGLPKSMR   DEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMR---DEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNP ND ADSDKEVSGSVSLSLH KFNEFFFVL GIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPQNDAADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE 236

[Close]

BLAST of CmoCh20G001350 vs. NCBI nr
Match: KAG6570434.1 (hypothetical protein SDJN03_29349, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418.3 bits (1074), Expect = 4.4e-113
Identity = 215/239 (89.96%), Postives = 215/239 (89.96%), Query Frame = 0


Query: 1   MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTV 60
           MEQRKY ADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLG                 
Sbjct: 1   MEQRKYGADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLG----------------- 60

Query: 61  GKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120
                LGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV
Sbjct: 61  ----CLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTV 120

Query: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180
           AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ
Sbjct: 121 AVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQ 180

Query: 181 TESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 240
           TESAPDTIVPSNFDNPVNDV DSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE
Sbjct: 181 TESAPDTIVPSNFDNPVNDVTDSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 218

[Close]

BLAST of CmoCh20G001350 vs. TAIR 10
Match: AT1G08500.1 (early nodulin-like protein 18 )

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64
Identity = 126/215 (58.60%), Postives = 154/215 (71.63%), Query Frame = 0


Query: 16  LVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTD 75
           ++ L+ LSLS      AYKNYTVG+S GWFD  E+P+ +YQKW   K+FSLGDFLIFNTD
Sbjct: 14  IMCLMLLSLS----ADAYKNYTVGESTGWFDIQERPSANYQKWADSKSFSLGDFLIFNTD 73

Query: 76  NNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSG 135
           +NHSVV TY+F TYK CDYD+   +DTTEWSAA+PSAT+P  V+++VPL+KEG+NYFFSG
Sbjct: 74  SNHSVVQTYDFKTYKDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFSG 133

Query: 136 HYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDN 195
           +YDGEQC+ GQ F INVTHGQGLP S       AP P         E APDTIVP+NFD+
Sbjct: 134 NYDGEQCKFGQHFMINVTHGQGLPDSSSPDDAAAPGPSESSQSGDDEVAPDTIVPANFDH 193

Query: 196 PVN-DVADSDKEVSGSVSLSLHSKFNEFFFVLAGI 230
           P + + AD DKEV    S S  +K + F FV  G+
Sbjct: 194 PKDIESADDDKEVHSKKSSSSTTKTSLFCFVFMGL 224

[Close]

BLAST of CmoCh20G001350 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 17  VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
           V+L FL  +    V A K YTVG++  W      P ++Y  W  GK+F LGD+L F  D 
Sbjct: 11  VVLAFLMAAPMPGVTA-KKYTVGENKFW-----NPNINYTIWAQGKHFYLGDWLYFVFDR 70

Query: 77  NHSVVLTYNFTTYKLCDYDDASEHDTTEWS 107
           N   +L  N T Y+ C     ++H    W+
Sbjct: 71  NQHNILEVNKTDYEGC----IADHPIRNWT 90

[Close]

BLAST of CmoCh20G001350 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 37/117 (31.62%), Postives = 54/117 (46.15%), Query Frame = 0


Query: 36  YTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYD 95
           + VGDS GW     +   +Y  WT G+ F +GD L+FN  ++   V+  N T Y  C  D
Sbjct: 9   HIVGDSNGW-----ELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLD 68

Query: 96  DASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINV 153
           +     TT ++  + S          + L + G  +F  G  D   C NGQ+  INV
Sbjct: 69  NY----TTLFTKGNDS----------IILSEVGKLWFICGVDD--HCVNGQKLSINV 104

[Close]

BLAST of CmoCh20G001350 vs. TAIR 10
Match: AT1G45063.1 (copper ion binding;electron carriers )

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-05
Identity = 47/164 (28.66%), Postives = 67/164 (40.85%), Query Frame = 0


Query: 17  VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
           V+++F  L G  +   YK   VGDS GW  K       Y  WT  K   +GD LIF  D+
Sbjct: 13  VIVIFTLLFGCCSATVYK---VGDSDGWTAKDHL----YYHWTEDKEIHVGDSLIFEYDH 72

Query: 77  N-HSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSG 136
           N + V        Y+ CD             ++ P A       V V   + G+ YF + 
Sbjct: 73  NLNDVTQVSGGLEYEFCD-------------SSFPKAVYNTGHDV-VTFTEPGSYYFITS 132

Query: 137 HYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGD 180
           ++   QC +GQ+  + V H    P  +   S   P+  V   GD
Sbjct: 133 NH--TQCTSGQRLGVFVVHDPSSPSPLPLPSKIIPSRHVYKVGD 153

[Close]

BLAST of CmoCh20G001350 vs. TAIR 10
Match: AT1G45063.2 (copper ion binding;electron carriers )

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-05
Identity = 47/164 (28.66%), Postives = 67/164 (40.85%), Query Frame = 0


Query: 17  VLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDN 76
           V+++F  L G  +   YK   VGDS GW  K       Y  WT  K   +GD LIF  D+
Sbjct: 13  VIVIFTLLFGCCSATVYK---VGDSDGWTAKDHL----YYHWTEDKEIHVGDSLIFEYDH 72

Query: 77  N-HSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSG 136
           N + V        Y+ CD             ++ P A       V V   + G+ YF + 
Sbjct: 73  NLNDVTQVSGGLEYEFCD-------------SSFPKAVYNTGHDV-VTFTEPGSYYFITS 132

Query: 137 HYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGD 180
           ++   QC +GQ+  + V H    P  +   S   P+  V   GD
Sbjct: 133 NH--TQCTSGQRLGVFVVHDPSSPSPLPLPSKIIPSRHVYKVGD 153

The following BLAST results are available for this feature:

BLAST of CmoCh20G001350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.4e-05	35.56	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]

BLAST of CmoCh20G001350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXQ3	1.4e-133	100.00	blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448143 PE=4 SV=1	[more]
A0A6J1J5H8	8.4e-126	95.82	blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111483656 PE=4 SV=1	[more]
A0A6J1JXY1	1.9e-109	84.36	cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111490768 PE=...	[more]
A0A6J1H378	2.4e-109	83.95	cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111459269 P...	[more]
A0A5A7V0S1	3.5e-108	85.59	Cucumber peeling cupredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of CmoCh20G001350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943355.1	2.9e-133	100.00	blue copper protein-like [Cucurbita moschata]	[more]
KAG7010311.1	5.6e-132	99.16	hypothetical protein SDJN02_27104 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512118.1	1.4e-130	97.91	uncharacterized protein LOC111776932 [Cucurbita pepo subsp. pepo]	[more]
XP_022985667.1	1.7e-125	95.82	blue copper protein-like [Cucurbita maxima]	[more]
KAG6570434.1	4.4e-113	89.96	hypothetical protein SDJN03_29349, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh20G001350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08500.1	1.1e-64	58.60	early nodulin-like protein 18	[more]
AT5G15350.1	1.0e-06	35.56	early nodulin-like protein 17	[more]
AT3G17675.1	2.3e-06	31.62	Cupredoxin superfamily protein	[more]
AT1G45063.1	4.3e-05	28.66	copper ion binding;electron carriers	[more]
AT1G45063.2	4.3e-05	28.66	copper ion binding;electron carriers	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 33..157 e-value: 8.0E-25 score: 89.1
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 34..152
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 44..146 e-value: 1.1E-19 score: 70.2
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 34..154 score: 26.437454
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..194
None	No IPR available	PANTHER	PTHR33021:SF328	BNAA08G26900D PROTEIN	coord: 12..220
None	No IPR available	CDD	cd04216	Phytocyanin	coord: 34..152 e-value: 1.71774E-25 score: 94.2492
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 12..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G001350.1	CmoCh20G001350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity