CmoCh20G001330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G001330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr20: 661013 .. 667911 (-)
RNA-Seq Expression	CmoCh20G001330
Synteny	CmoCh20G001330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCCTTCCCCACTTACCCGCCTTCTCCTCCTTCCAGCAGCCGTCCGATCCCCACTCTCCACTACGCGCCCCCAGCGCCACTGTTCTTTCTCCTCTTCTTATTTTCACTCTCTGCTGCAACCTTACGCCGCCACGCCAACCCCATCTTCTGCTGCAGCCCCCCATCAATCGGTCGGCTACCTTCAAAACTTGCTTGGATCAATTTTTTTTTTCTTTTTATTTCTTCGATTCAACCAAATTTGATTTAAAATATGATGAATTTTGAATTAGGCCAGTTTTGATTCAAAATTCTGCCAAATTTCATCTATTTTGGATGGAGATTTCTTTGTTTCTCCCTTTCTTTCCCGCAGTTTGTTTTCAATTTTATCTTGTGTTCTGTTTTCTCTCTGTTTTTTCCCTTGGTATCGTCATTTATTCTTCTTGACCTCGAAGTTCTTTGCTTCTCAGTGATAAGATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGACGGATATGGAACCTGTAATGAACATGCGAAATATCAAGAAAGAAATTGAATTCCTCAGTAATTTCTCTTTCCCCCCTCAGAATTCAGCTCATTATTTGTGCATATATCTTTAGAGGGAGTTTCATTATTTCAATCGACGTTAAGAGACTAGTTTCTTTCTGAAATTATAGAGTATGTATGAAAGCCTTGGGTTCAATTTTCTCCTATTTTCTGGTTTTATGTGCCGTTATGATACGCGTGGAGTTTTACATTTGAAGAAAATATACCACAAATCTTATATGTCACATTGATTTTTCTATTTTGTGAACACTGATGGAAAACACAGAAACTATTTTATTTCAACGAAATCAATGGATTAATTATTTCTTTCAATTGAGAATCTTTATATATTATTAGACTTTTATCAAAGAAGGATATGGTAGAGAATGAATCTTCTGAGCCTGTTAGAAATGTATGTCTGTACTAATTATTGTAGTGCTGGTGTAATATACTGAAGAGCTTTGGTCGTTTGGCTTTAGTGGCCGCTCATATTTGAGATTTGAGTCAAGATCCAAAGGAACTGAATAGATGTTGAAACTGTATGTAACTTGCATCCTCGCATTTCCTTTCAGATTCCATTTGTGTACAAGCTACTTTTTAAACATCTTCATGATCACACCTTTCCATAAGGTAGCTTCCCCGCTTTGACTTTAGATCCTTCCTCTGGTCTTATATCAATATTTATTGACCAAAATGTTTAGTAATTGTTTTGAATGATGTTTGTTTGTAAAGCCTCACCCTTTGTTCTGGGAAAATTTATAGTGCTATGACGTTCTTCTTCATACTCATTTCATTCCATATTTGTCATGTCATAGACGATGTATTACTTCATTTAATAGACTTAGACCGCACACCATTCTTAAATGCTTATGTTATGGCAAATATGCAAACGATGAATGGAGGTAGTTTGGAAATTTTCCATACTACCCTAGACTGTAGTACTAGAAAATTTCCCTGTGTGTGTGTGCAGTTTTTGGGTAATGAATATAAAAGGAGCAAGTATGAAGTAGCTAATTTGTTTTTTTGTTCTTTATATCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGGTACTATTACAAAATATGGATATGTTATTATGGTAAGCTGAATGAATGTAATTTATAAAGCTTACATCTGACTCTTGTGTTTACCATGGTGCAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCATAAGATGGGTTACTTTGCTTTTTTCTTTTCTTTTGCCTACATCCACTCCTGTTGTTTGCAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCCGAAAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAATGGCCGGCAAAGGTAGAAGAAAAGGAGGGAAAAAGAAGAACAACAAAAGTAACAAAAAGGGTGGCGGTAAGAAGCGCCATTGAAATCATTCATCACCTACAACATTCCTGTTTTACAATGGAATATGGATATCCTTTTGTCATATCAGATGCAGTTCAATGAAATCTTAGATGCAGTTCAATGAAATCTTGCATACCCTTGTTTTGCATATAAATTTATTACGTCCATCTATCCATTGAATGAAATTTTTATTTTGATTTTGTTTTTTTGTTGGATTGGAACCCATTTGTACTTTTCGGCTTCATCTTGCCTTTTACTTTTTTGTCGAGCTCCATCTTCTTTGTCGGGAAAGCGTGAAAGACGCATTTTAAAGCCTTGAGAGAAAGCTTGAAAGGGAAAGCCCAAATAGGACAATATCTACTAGCGGTGGATCTATGTCGTTACAAATGGTATCAGAGCCAGACATTGAATTATGTGCCAGCGAGGAATCTGTTCCCTGAAGGACACAAGGTGGTGTGCTAGTAAGGACGTTGGGCCTTGAAGGGGGGTGGATTGTGATATCCCACATTGGTTGGAGAGGAGAATGAAACACCAGGGTGTGAAAACCTTTCTCTAGCCGACGCATTTTAAAGCCTTAAGGGAAAGCTAAAAAAGGATAATATTTTCTAGATCTATGCCAACACGCATTTGCATCCTTTTAGTAGGATAATATTTTCTAGATCTATGCCAACACGCATTTGCATCCTTTTAGTTCTTTCTCAATATAAGTTTAGTTTTTTTTTTTAAGAGGTTCATCTATCCAAATAAAAAGAGATGGATGGGAACCTATTTGCACGACCACTAAAATATTGTTTAATAATTTACGAAGTATATATATACACACACATAAGAGGAATGGGGTCAATATATATACACACACATAAGAGGAATGGGGTCAAAATTTCTCTGCTCGTTTGTCTTATTCTTTTTTTCATTTATCCTTCTCTCGATATAATATATTAAGTCGAGAAAAAAATCTTTTTAAAAATGGTCAATTTTACAAAAAAAAAAAAAAAAAAAAAAAATAGGACAATTTATCAAATTTTAACTTCATGAATTATGGTTTGAATCCTAAATCCTCTAAATATATTTTAATATGAATATAATTTTGAGGATTTTTTTTTTTTTTTTTTTTTCCTTCGACAATTTTAATAAACAAAGAATTTTAAAAATAAAAAATAAAGTAACTTGTTGTAATTTACGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGGAGATCCGGTCCAGTATTGAAGGGAATAGGGATGAAGGAGAAGCGTGATAGCAGTTTTTGACAAATCTGAATTTCGAAGTCTTTGAACCCAATTTACCCGATTTTTCCAGAGCGTAGGGTATTACAACCTCATTTCGACATCCTGTAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGGGATTATCATGTACCTTCCATCTCTTTCTTCTCTATATCTATCTTTTTGGAAAAAGTAATTAGCTTAGGAAATTTTCTTGATCATTCAATGTTATGTATTCCACTGCTAATCTGTTCTTTGTTAACGAGTTCTCCATTTCGCTTTCAATTTTTAAACCTTCTTCCCGCTAGAATTTTTTAGTTCATTGTTGGAACGTCACTTGCCACCCGGGATTAGGACGGATTGGGCTGTTCTTGCTGTTTGCGAGAGATAACTTGGCCACTGTTTGTTTGGTTCAAAAGAAAAGTGATATTATTCTAAAATAATTGTTTGTCAAATTGTCATCGATTACTTGCGAAGAAGAATCTGCTTGAATTGATTACTGATAGTTGAAGTACAAGAGACTCTATTGATTACTGCGCTGATGAAGTACGACCTTAATTTCTTACATCATGATTGCACCCTTCTGCACGGGAAGTAATGTTAATAGCGAACTTTGTTTCCATTTGATTAACAGCAAACTCTAATTTTTATTGTCTTATTGAATCTTTAGCTTCTTTTCCCTCTTTGATAGATCAACTATATTGTGCTAAAATAAAAACTTTTGAATGGAAGGATGAGACATATCTGAGAAGGATATATGTGCATCAGCCATATGATTGACTTTGATAAACTTGTCAATGATGCTCATTTTTCTGGTGATGGATGCGTCAATTTTTAGTGGGAAAACAGAGAGCTAAAATTTGTTTGTCTTTTATTTAGATGTTTTACCAATCATGAAACAAGAAATTAACTAAGACTAGGGGAAGCTTCTAATTCAACTTCAACCACTTGCACTGAGACTAAAATGGAGTTCAAAAAGTTTAGTTGAATGATACATATAAAACTCTATGAGCTAGATTGTGAAGTTTTTTCTGTTCTCATTAAGGGTATGTTACAATTATTAGTAGCATAGGTATCCATCCATTTTGTTAAAAATCTCGTATGATTTTCAGGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGGTTAATTAAATGCTTTGCCCTTACTTCCTGTCCTATTCGCATGTTCTTGTTGCTGGTTAATTAAATAATGAATGTTGTCTTGTTTATAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCAAAGGATCAAGGATCTGACCTACATGGTATTTTATCTTGAAAATATAACTTTTTTTTATCTTTTTCCAAATTAACATTTTAAAAGTGATCAAATATATTTGATTTGCTTTAAGGAACCATGAAACCCCTTTTTTCCTAGGATAACATACATTTGTTCTCAAATCGCTTATGAAGTTATCCTTTCTGGTTTTAGTAGATAGTATCTGTTCAGTGGCCCAGATAACGAAAGCTTCCTATTTTTCCTAGAATTTTAAATATAAGTTCGCTAATATTACATTTTTGGGATGACTGATAACAGATGCATTCTGGAAGAAGCTAAAGTTCGCTGCTGAGCAGAAGGTATGAGCTTCTTCTATTTCTTTTTCAAGTGTTACATTTTTATCTAAATTAGGGTATAAAACCCCTAGAGTTACTCGGTTATCCTTTTCTGGTACAAGTCCTTGTGTTTATGTTTATAACTCATTAGTTACAATCTATATGACAAAAATGGAAGTTCACCAAAAAAAAATTTCGTCTGCTTAAATTCTAGTCATGCCTTTACAATATTATAATTTGTCAACGCATTTTGATCTGAATTTGTCCATTTTTTGCGAAATTAATCATATGCAACTGATTAGTTACTTTTTTTTTTCTTTTTTTTTCTGATGTGATGTAAGACTAATGCGTATATTCAGTTTCAGATTTGGTTAAATCGTTGAATGCAAATGAGCATCACTTTAACATAAATGCAAATATCTGGGTTTCTCAACAAATTCCATCTTGATGGTGCATTGCATTATACTTTCATTTGAATGTGAAAGAACAATGTTTATATTTGTATCTAACAGCTTGTTGTTTGCTTATTCATTACACGCAGGTGGGCAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTAAGTCATTCAGAACATGTCGTGCAATTAGATATTTAGTTTTTCATCCTCCATTGACATTAGAATGAAAATCCTATAATCAATATGACTACAGGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAGTATGGTTTTCTGCTTTATAAGTCTTGTATTGCATATATCATCTTCTCTCCATAGACCACATTGTGCAAGTCTGATTCAATTACTAACAAGGATTTGGAACAGATAAAATCTTGTTTTCAAGGGATCTGCAAACACTCTCTTTCACATACATTTTTACTCTGTGGCTTGTCCGTAGTTTAATACTTCTATGCATTTTTACTCGATACAATATGATGTGACTATCTTTTTCGATAAGAGAAATAATTTTATTGATAAATGAAATAGGTGGAGTCGAGAATTCCAACGCCAATAGGTGAATTTCAAGAAAGTTTTCCATGACATGATAATATCTCAACCATTCCGACCACCGACACAAAAGGGATAAATAATAACCTCCAAATCATGGGAGGACTCACATCCATAAATTTTTATACTTCATGACAGACAATAGTTATGTTGTTTGAGATATGGGCTGCATCATATTCAGCCAGATAAAATAGTATAGAAACTATAAGAAAGCTTCCTGAAGTGAAACCCTTCATTATTCGTTCAATGTAAGGTGTAAATGTATGAGTAATAAGATGTGTCACATCTTGGAAGCATCGGCTGCAAGTTGGTTGAAGGCAATGGAAGTCTTCGAACCCGATGGCCGCCCCAAATGGTTGCTGATGAAGTTCCCAGCAGACATGACCTTTGCCAAATCCACATTGGTTTTTATGCCAAGTCCGTGGAGCATGTACACCACATCCTCAGTTGCAACATTCCCGGAAGCTCCTTTTGCATATGGACATCCACCCAGACCTGCAACAGAGGAATCTATTGTGCTAATCCCCATCTGTTCATAAAAGCAACACACCAGTTAATGGTTGAAGTTGGCCCAAATGAAATGAAATCCTAGGCAAAGCTTGCAACTTCCATCCATATATCTGGAAAGCAAGTTTGGCAGGGACCAAGTATATGTTTGAAATGACTTTCAAGTGTTTAAAGACATATTTTTCTCAACCGTGTCATTATCATAATGTTTCGTTAGATAGGAACAAATTTGATAAATACCGATAATTCTTGGATGGAGTATTAGAACGAAAAAATCCATTAG

mRNA sequence

CTTTCCTTCCCCACTTACCCGCCTTCTCCTCCTTCCAGCAGCCGTCCGATCCCCACTCTCCACTACGCGCCCCCAGCGCCACTGTTCTTTCTCCTCTTCTTATTTTCACTCTCTGCTGCAACCTTACGCCGCCACGCCAACCCCATCTTCTGCTGCAGCCCCCCATCAATCGTGATAAGATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGACGGATATGGAACCTGTAATGAACATGCGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCCGAAAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAATGGCCGGCAAAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGGGATTATCATGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCAAAGGATCAAGGATCTGACCTACATGATGCATTCTGGAAGAAGCTAAAGTTCGCTGCTGAGCAGAAGGTGGGCAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAGTGGAGTCGAGAATTCCAACGCCAATAGGTGAATTTCAAGAAAGTTTTCCATGACATGATAATATCTCAACCATTCCGACCACCGACACAAAAGGGATAAATAATAACCTCCAAATCATGGGAGGACTCACATCCATAAATTTTTATACTTCATGACAGACAATAGTTATGTTGTTTGAGATATGGGCTGCATCATATTCAGCCAGATAAAATAGTATAGAAACTATAAGAAAGCTTCCTGAAGTGAAACCCTTCATTATTCGTTCAATGTAAGGTGTAAATGTATGAGTAATAAGATGTGTCACATCTTGGAAGCATCGGCTGCAAGTTGGTTGAAGGCAATGGAAGTCTTCGAACCCGATGGCCGCCCCAAATGGTTGCTGATGAAGTTCCCAGCAGACATGACCTTTGCCAAATCCACATTGGTTTTTATGCCAAGTCCGTGGAGCATGTACACCACATCCTCAGTTGCAACATTCCCGGAAGCTCCTTTTGCATATGGACATCCACCCAGACCTGCAACAGAGGAATCTATTGTGCTAATCCCCATCTGTTCATAAAAGCAACACACCAGTTAATGGTTGAAGTTGGCCCAAATGAAATGAAATCCTAGGCAAAGCTTGCAACTTCCATCCATATATCTGGAAAGCAAGTTTGGCAGGGACCAAGTATATGTTTGAAATGACTTTCAAGTGTTTAAAGACATATTTTTCTCAACCGTGTCATTATCATAATGTTTCGTTAGATAGGAACAAATTTGATAAATACCGATAATTCTTGGATGGAGTATTAGAACGAAAAAATCCATTAG

Coding sequence (CDS)

ATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGACGGATATGGAACCTGTAATGAACATGCGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCCGAAAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAATGGCCGGCAAAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGGGATTATCATGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCAAAGGATCAAGGATCTGACCTACATGATGCATTCTGGAAGAAGCTAAAGTTCGCTGCTGAGCAGAAGGTGGGCAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAG

Protein sequence

MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKDPIATMDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSDLHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE

Homology

[Close]

BLAST of CmoCh20G001330 vs. ExPASy TrEMBL
Match: A0A6J1FZ06 (uncharacterized protein LOC111449125 OS=Cucurbita moschata OX=3662 GN=LOC111449125 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.3e-77
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 154
           SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK
Sbjct: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 153

[Close]

BLAST of CmoCh20G001330 vs. ExPASy TrEMBL
Match: A0A6J1JBZ2 (uncharacterized protein LOC111483659 OS=Cucurbita maxima OX=3661 GN=LOC111483659 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 4.6e-75
Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPI+KKQKEREQKMVQEHWNVSQFGG ASSNHSRNSLGKRKPE QVLKS
Sbjct: 61  QKKQRLPLSVARPIIKKQKEREQKMVQEHWNVSQFGGMASSNHSRNSLGKRKPEKQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 154
           SEGFFKHGVLDVKHLLRPAPSRNSD GNEMAGK
Sbjct: 121 SEGFFKHGVLDVKHLLRPAPSRNSDIGNEMAGK 153

[Close]

BLAST of CmoCh20G001330 vs. ExPASy TrEMBL
Match: A0A1S3BNE0 (uncharacterized protein LOC103491457 OS=Cucumis melo OX=3656 GN=LOC103491457 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.6e-62
Identity = 134/165 (81.21%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDK AKAGSSR+STDME  M MRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEH +V QFGG ASS++SR S GKR+PE QVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPA------------PSRNSDFGNEMAGK 154
           SEGFFKHGVLDVKHLLRP+            P RN+DFGNEM GK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGK 165

[Close]

BLAST of CmoCh20G001330 vs. ExPASy TrEMBL
Match: A0A0A0KEY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429080 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 9.9e-62
Identity = 133/164 (81.10%), Postives = 140/164 (85.37%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDK AKAGSSR+STDME  M MRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEH +V QFGG ASS++SR S GKR+PE QVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPA------------PSRNSDFGNEMAG 153
           SEGFFKHGVLDVKHLLRP+            P RN+DFGNEM G
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGG 164

[Close]

BLAST of CmoCh20G001330 vs. ExPASy TrEMBL
Match: A0A6J1FZ15 (uncharacterized protein LOC111449126 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449126 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 159 MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSD 218
           MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSD
Sbjct: 1   MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSD 60

Query: 219 LHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE 278
           LHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE
Sbjct: 61  LHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE 119

[Close]

BLAST of CmoCh20G001330 vs. NCBI nr
Match: KAG6570433.1 (Proteasome adapter and scaffold protein ECM29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 515.0 bits (1325), Expect = 4.0e-142
Identity = 271/277 (97.83%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1    MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
            MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGK 
Sbjct: 1840 MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKS 1899

Query: 61   QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
            QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS
Sbjct: 1900 QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 1959

Query: 121  SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKDPIATMDESEFRRLLQLFPVVRSRDYH 180
            SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKDPIATMDESEFRRLLQLFPVVRSRDYH
Sbjct: 1960 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKDPIATMDESEFRRLLQLFPVVRSRDYH 2019

Query: 181  AESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSDLHDAFWKKLKFAAEQKVGKLEA 240
            AESELSRQSTSKSSKSE     EAWNEDGEKSKDQGSDLHDAFWKKLKFAAEQKVGKLEA
Sbjct: 2020 AESELSRQSTSKSSKSE-----EAWNEDGEKSKDQGSDLHDAFWKKLKFAAEQKVGKLEA 2079

Query: 241  ERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE 278
            ERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE
Sbjct: 2080 ERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE 2111

[Close]

BLAST of CmoCh20G001330 vs. NCBI nr
Match: XP_022944773.1 (uncharacterized protein LOC111449125 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-77
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 154
           SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK
Sbjct: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 153

[Close]

BLAST of CmoCh20G001330 vs. NCBI nr
Match: KAG7010308.1 (hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-76
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKSAKAGSSRNS DMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 154
           SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK
Sbjct: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 153

[Close]

BLAST of CmoCh20G001330 vs. NCBI nr
Match: XP_023511857.1 (uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-75
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKSAKAGSSRNSTD+EPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDVEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGG ASSNHSRNSLGKRKPENQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGMASSNHSRNSLGKRKPENQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 154
           SEGFFKHGVLDV HLLRPAPSRNSDFGNEMAGK
Sbjct: 121 SEGFFKHGVLDVNHLLRPAPSRNSDFGNEMAGK 153

[Close]

BLAST of CmoCh20G001330 vs. NCBI nr
Match: XP_022985670.1 (uncharacterized protein LOC111483659 [Cucurbita maxima])

HSP 1 Score: 291.2 bits (744), Expect = 9.4e-75
Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QKKQRLPLSVARPI+KKQKEREQKMVQEHWNVSQFGG ASSNHSRNSLGKRKPE QVLKS
Sbjct: 61  QKKQRLPLSVARPIIKKQKEREQKMVQEHWNVSQFGGMASSNHSRNSLGKRKPEKQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGK 154
           SEGFFKHGVLDVKHLLRPAPSRNSD GNEMAGK
Sbjct: 121 SEGFFKHGVLDVKHLLRPAPSRNSDIGNEMAGK 153

[Close]

BLAST of CmoCh20G001330 vs. TAIR 10
Match: AT2G44820.2 (unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-29
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           ++ R    K      ST ++  ++ +NI K++    SSHM+WKDKK +E +K+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG  SS+  + +  KR PE +VLKS
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQNVILGRFGGGGSSSR-KPAERKRTPEERVLKS 121

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSD 146
           + G FK GVLDVKHLLR  PS +SD
Sbjct: 122 TGGIFKGGVLDVKHLLRSGPSSSSD 144

[Close]

BLAST of CmoCh20G001330 vs. TAIR 10
Match: AT2G44820.1 (unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-29
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 1   MHSRDKSAKAGSSRNSTDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           ++ R    K      ST ++  ++ +NI K++    SSHM+WKDKK +E +K+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKS 120
           QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG  SS+  + +  KR PE +VLKS
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQNVILGRFGGGGSSSR-KPAERKRTPEERVLKS 121

Query: 121 SEGFFKHGVLDVKHLLRPAPSRNSD 146
           + G FK GVLDVKHLLR  PS +SD
Sbjct: 122 TGGIFKGGVLDVKHLLRSGPSSSSD 144

[Close]

BLAST of CmoCh20G001330 vs. TAIR 10
Match: AT5G12240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages. )

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-21
Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 159 MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKS-SKSELSEWQEAWNEDGEKSKDQGS 218
           MD+ EFR LL LFPVVRSRD+ AE + S+QSTS+S    E+SEW +A      K      
Sbjct: 1   MDDQEFRSLLDLFPVVRSRDHRAELDSSKQSTSQSVVDREVSEWHDAPTVAEPKDLQYLK 60

Query: 219 DLHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFL 269
              D FW+ LK AAE+KVG +EAERFC +F+++H KLV EEL  +AA+ +L
Sbjct: 61  TDQDKFWENLKAAAEKKVGGVEAERFCKAFEKLHKKLVYEELDPEAAKRYL 111

[Close]

BLAST of CmoCh20G001330 vs. TAIR 10
Match: AT5G12240.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-15
Identity = 63/165 (38.18%), Postives = 80/165 (48.48%), Query Frame = 0


Query: 159 MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKS-SKSELSEWQEAWNEDGEK-----S 218
           MD+ EFR LL LFPVVRSRD+ AE + S+QSTS+S    E+SEW +A      K      
Sbjct: 1   MDDQEFRSLLDLFPVVRSRDHRAELDSSKQSTSQSVVDREVSEWHDAPTVAEPKDLQYLK 60

Query: 219 KDQG------------------------------SDLHDA-------------------F 269
            DQG                              S L  A                   F
Sbjct: 61  TDQGMHHLFFSYFRISTKLPLAYWLVRLTSICISSQLFSAVSCVLKSVFGCSSSFKLYKF 120

The following BLAST results are available for this feature:

BLAST of CmoCh20G001330 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh20G001330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ06	1.3e-77	100.00	uncharacterized protein LOC111449125 OS=Cucurbita moschata OX=3662 GN=LOC1114491...	[more]
A0A6J1JBZ2	4.6e-75	97.39	uncharacterized protein LOC111483659 OS=Cucurbita maxima OX=3661 GN=LOC111483659...	[more]
A0A1S3BNE0	2.6e-62	81.21	uncharacterized protein LOC103491457 OS=Cucumis melo OX=3656 GN=LOC103491457 PE=...	[more]
A0A0A0KEY3	9.9e-62	81.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429080 PE=4 SV=1	[more]
A0A6J1FZ15	1.6e-56	100.00	uncharacterized protein LOC111449126 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh20G001330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570433.1	4.0e-142	97.83	Proteasome adapter and scaffold protein ECM29, partial [Cucurbita argyrosperma s...	[more]
XP_022944773.1	2.7e-77	100.00	uncharacterized protein LOC111449125 [Cucurbita moschata]	[more]
KAG7010308.1	1.3e-76	99.35	hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023511857.1	1.5e-75	98.04	uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo]	[more]
XP_022985670.1	9.4e-75	97.39	uncharacterized protein LOC111483659 [Cucurbita maxima]	[more]

BLAST of CmoCh20G001330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44820.2	8.4e-29	48.97	unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bac...	[more]
AT2G44820.1	8.4e-29	48.97	unknown protein; Has 70 Blast hits to 70 proteins in 25 species: Archae - 0; Bac...	[more]
AT5G12240.2	2.9e-21	52.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G12240.1	4.0e-15	38.18	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027973	Protein of unknown function DUF4602	PFAM	PF15375	DUF4602	coord: 4..106 e-value: 6.0E-17 score: 62.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..216
None	No IPR available	PANTHER	PTHR35312	OS07G0641800 PROTEIN	coord: 159..272
None	No IPR available	PANTHER	PTHR35312:SF1	OS07G0641800 PROTEIN	coord: 159..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G001330.1	CmoCh20G001330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005730	nucleolus