CmoCh20G001270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G001270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	pre-rRNA-processing protein las1-like
Location	Cmo_Chr20: 633976 .. 640267 (+)
RNA-Seq Expression	CmoCh20G001270
Synteny	CmoCh20G001270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCACTGTTAGAATTGGAAGGAATGCCGGCGGAGAATGAAGAAGAGAATTCGTCGTCTTACAGCCGCAAATTGGTGCCCTGGTCAACTTGGAGCGAATGGCTTTTCGTTAGTCACTCACTCTTCTCCGACTCTGTAGACTCCGTTGCCGCCGCTCTGAGCAGAGTAAGCGTACCTATCTCCGCCGCATGTTTATTCTCCACTATTCTAATTTTCGAAGTTACATTTAAACCTGCAATTTTAAATTCTATTATGCGGATCAAATTTGATATCACAAGTAAGACTATATAAAGGTTGGTCTTGTTTAGATATAGACATTTTGTATTTGCCTAGAGGCAGTGATTGAAATCCTTGATCCATGCCATGATTTAGTATCGGCTTTGCTATTTGAAATAATTTTCTCCAATGGAGCTGACACTAAAAAAAATTTCTTCGACAATTGATGGTGAGTGTGAGCACAACTCGTGGTTGATGATGTTAAGTCTTTCACAATGCCACAACTAAAAAAGTTTTGATACCAATTGTTGTATCTAAAGCAAGATCAATTACACTCACACACCTATCACAACAGAAATAAACAAAAAAACTCAAAGAAATTCTCTTATGTCCACGGCGACAATCAATCAATATAATCAAAGTTTATAAATGTATCTCTCATATTCTCTTGTGGTTTTGAATTCAGATATCAACATGGAGAAGCAGAGGATGTCTTCCAGTTGTGGTTGAAGTTACAGCATCAATTATCGAAATCCAACAAAAAGATCCCTACTTCATGTATGCTTCGATTCCCACTTCTTGCCTACTCATTTCATGCTATTATTCGCTGTACCATATCGTTTCCAGCTCGAGCTATGTTCTTTAGTTCTTTAATGTCATGTTCTCAACTTCCAAACCATGTTACAAAAGAAATTAACACTACCATGTTTTTAAGAACAATTACTTTTGTAACCAAGATTCTGTGGTGTTTTTTTTTTAATGTTCGTTATTTTCTTTTATTCATTCATCGCAGAAAGAACCAATCGGTGGATGCTTCAGTTCGTGGTACAGAGGAACAATTAAATAATGTTTCACTTTCAGAGGAAGCACTAGCCATGTTATATTGTATGGCCATTATGAGGTAATTTTTTTTTTTATGGTAAAGTACGAGGCAAAACTTTCTTAATTTGTTACAAGGAACGCACTGTATTCTTGATTTTGAAGGCTTGTAAATGGTGTTGTTGAGAAGACACGTAAGAAAACAGAGGTTTCAATTGCTGTGGCAGCTGATGCTATTGGTTTACCTCGTATGCTGATTGATATTCGTCATGGTGAGTAATATCAAACATCATTTTGTACGCTATCATTTTCCTTTTCCAGTTTTATGATCTTTTTTTTTTCTTTGTTTTAATGTTTTAATATTTTCATGTTTCTCTTGGCAATGGTTGTAGAGGGCTCTCATCGCGAACTTCCATCTCTTCAGGTGGTTCGGTGTGCCTCAACCAAGGTATGACTATGAAGTATGAACCCTCAACGTTCTTGTTGTATTACCATTCGATGATTTTCAACTCTATTACCGACGTGGGATCTCACAATCCACCCCCTTTTGAGGCCTAGTGTCCTTGCTGGCACACCGCCTCGTGTCCACCCCCTTTAGGATTCAGCCTCTTCGCTAGCACATCGCCCAGTGTCTAGCTCTAATACCATTTGCAACAACCCAAGCCCACCGCCAACATATATTTTCCTCTTTGAGTTTTCCCTTTCGGGCTTTCCTTCAAGGTTTTTAAAATGTGTTTGTTAGGGAGAGATTTTCACACCCTTATAAATAATGCTTCGTTCTCCTCCCCAACCGATATGACTTCCCCGTAGAAGTATTTTTAAGTGAAACCTTCTTGATGGTTTGGTGATTCCAGGCGCTTTGTTGGTTGAAATCTTATTATTGGGGACCTCAGGAGAGAGCTATTCCATTTCAAGGTGATATAAGCACTACCATTCGAAAGGAAATCAAATCCAAACTTCGTCATTTGGCTTTCAATTTAAAAGTGAAGCAAAATCCTCAACTTGAATCTGCTCTGGTTAAGCCAAAACGTATGCGTTTAATCTCTCCCTTCCGATTTTGTTCATTCATTGTTATCTTTGAATCTTTAGACTTAGCTGAGTAAATGAAATACTAACAGTACCTTTTCAGGTTTGAAGACAAAGGCTGCCGAGACACTGAAGGTTCTTATTCAGTTATATTCCACATTCTCTTCAGAATTTGTATCTGTATTGTTGGGATTCTTGTTAAAGGCAATGACGTCATCGGACTTGGCGTTTCCCAAAAAATCCAAGAAATCCAGCAGCCCTGTATTGGATGGATGGAAGCTTACGATTGCTAAGATCTCAAATAAGGAGCCGGAATTGCTTTTAGATCTGCTGCAGGCAGTTCTAGAGAAGATCAAGACTCAAGAAGCCTTGGAATATGGTAGGAATAAATATCAACCGTCTAATCCTTTTAGATTTTCCGAGCTTTATGATGAGGCTGTGGCATATACTTGGCTAGTTACCGTTTTACCATTACCTCTAGGAGTTAGCTTTTGGGCCATTATACGTATGCCTGATTTGTATATTTTTTGTGAGATCTCCCAAAGGTTGGAGAGGAGAACGAACCATTTTTTATAAGGGTGTGGAAACCTCTCCCAACATTTTAAAACCGTGAGGTTGCCGGCGATACGTAGCGGGTAAAAGTGGACAATATCTACTAGCGGTGGGCTTGAGTTGTTACAAATGGTATCAAGGTCAGCCACCGGGTGGTGTGTTAGCGAGGACGCTGGGCCCCCAAAGGGAGTGGATTGTGAGATCCCACATCAGTTTGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTTTTCCTGGTAGATGCATTTTAAAAATTGTAACGGGCCAAAGTGGACAATATCTATTAGCGGTGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACGGGGCAGTGTACCAGCGAGGACGCTAGGCTCTCGAGGGGGGTTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAATTAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTGGTAGATGCGTTTTAAAACCATGTGGCTGATGGCGATACGTAACGGGTTCACTCTCTGTGAATGGTTCTCTCTACGTGTGAGCATGGTTTTCTTATTTCCTTTTTCCCGTTCTTTCAGAAAATCAGTACTCCATGTCCTCAGCCCACAAAATGGATAGCTGTCAAGTAGCACATCTGTCCTCTATGTTTGCATGGCTCGTTGACAAACTTAAGTGCAAAGAAGTTTTCTCTGGAAAACACACTCCAGAAGGTATTCTTATGGAGTTGCTACGTAAATGCCTCGTGGTATCAGCTCCTTACAACAAGCGGCTTATGGATTCAGCCACTGATCTTGCACACTTGTTGGATAACAGCTCTCTAGTGAAGAAACTGAAGAAACTACCATTTCTCAATCAACCAGTTTCACATTTACTGGACGAAGAAAATCCCAACCAAACCACGTCTGAAAACAGTTTCAACCAGGCCGAGTCGCTCCGCGAAGCAAGTCGGAAACTCGAGATCATTAAACTCCACAAAAGAAAGAACAACTTGGCGACGAACCCAGTAGATGGTAATGTTGGAAGTTCCAGCAGATGGACTGTGGTAAGTTCGTGGACTCCATGTCCCATTGGTATGTTGCCTCGTTCGATTGGCTGTTCAGGTCGGCTCCCTGTTCTTGACCTCGATTCCGAGAACAAACCAGGTTCGGAAGAGCTGAGAAGCAAAGAGAACTGTGAAATCACCAACTGTTGCCACAAGAGGGAAGCCAGTTCTGATATTCAGCATCTTGATAGCTGTACTGTCAAGAAAATGAAGGAAACAGATGATGTTGAGTCAGCTGAAGATGTTAAAGGGCGTTTGTTGATTGGTGGGATATGGAAGAAAGTTGGGGAACAAGAATTATCTGCCATTCAGTCTGCGGTTAGGATATTAATTTAAATTCTTTCACAGTTGCTTAGATTTTTGCTGTCATCTCTGATGTGAAAGCTTGTAGGATATCTACTTTCATATAGTTATGCCCAGTAAGTTATTTCGAGTCTCATTCATATTTATATTATATAATATTATAATTATTTGGGGAAATGGGAGCTTTGTTGGACCAGAAAGGCCCATTTCGTGGATCTATTTCGGCCCAGCACCAAATTTTAGGCCCAAAATGGAGTCTAGAGATGCACCAATTGGGCCAGGCCCAATTTCTTCCTCCATGTCATTTGCTGTTCAACCTATTAGTATTTCTATTATTAGGTGGATTTCTTTTATTGGGTTGCGTGTGATGGATTATATATAGATATATCATATTAGATTTAGATTTATTAAATTATTGGCGGTTTTCTTTTATGGGGTTGCGTGTGAAATTGGGTAACCGCAAATATAATGTAATGTTTTTTTTTTTTAACAAATATAATGTAATGTTTAAAACGTGGGAGAAGAGACATAATATGAAGTGGCCAAAAGGGAGACCACCATATTTAAATCCCCACTTTATTTTATTTTTATTTTACAACTTTCCTTATATTCATTTATTTATTTTCCAATTATATTTTAGTTTCCAATTATTTCACATATAAAATTATTATTATTATTTTACCATGAATCGACTTAAAAAAGGAAAAAAAAAAAAAGATCTCTATAAATTAAGTAAATGGAAAAAAAATAAAAAAAAAAAAACTTATGGAATAAAATATTCTATCTAATTGAATATATTTTAGTTACTAAAAAGAATTTTCATTAAAATTTTGGAATTTAAAAAATTGTGTCGAATAGTAACTTGAAATAAATTAAATTGTTATATCCATTATTAATTAATGTTAAATAAAATTAAATATTTTAATTTACACGTGCTTAATTTTTGAAGATTATATGATATATTTTGATTAGACGTTTTTGGAAGAAGACGAGAGATTGAATCTTATAATCAAAATTTCAGCTTTTTTTTCTTTCTATTTTTTCAAAGGCAAAGCAAAGTCCAACAATTGAAAATTTGAGCAGACTGTTTGAGGCTAATTTGGTAATTTCAATCCGTTACGTATGTGACATCATTTAATTATATTATGTGACTTGATAAGACATTTGAGCTAATTACAATCCAATTGCACGAATAAAAATACAGAACCAAATCTGCACGTGCAAATAACCAATAATGCACCTAAATAATTATTATTTTCAGACATTAAAATATTAGCTTTTATCTCTGAATTTGAATTTTTTTTATTTATGTACATACATAAATTTTAAATTTTATAATAAGGTAAAATTACAAATTCTTACCATTTTAAAATGAATCTAACTTTTAAGTTTGTGCAATATTTAAAATTTAAATAATTATTTTTTTAGTGGATTAAAATTTTAACTTATAGCTAATCAGGGCTTAATTATGCTAATTTTGAAATCGATAATTATATATGGAACGGGCTTTTATTAAAAAAAATATATATTAATAACTTAGTTGACTTGGCCCACAAATCCAAAAGGCTAACGCTGGTGATCTGTTTTAACCTCGTGTGACGTGTCTACATGTAATTGGTGTAACGATGGAGATACTGAACGTAGGGGAACAAAGCCCAAACCTGCCAGTAATAATATCACGGAATCGGAAATTTTTTCTGGTTAAACGGATCTTGCTCCAACTTGTAAGGAAGAGAGGGAATCTTGGAAAGAGAGCGATGAAGAATGAGAGAGATGGGTTTTAATTATTGAGTTTTTAAGGTTTATTACTTCGTTTGATTGTATCCACACATTAATACCCTCCAAAAATCTCCTCCTTCTTCGAGCCTCGAACGCCCATTAAATACTTGCCTTTCTCCTTTGGTCTTGCACACAACCTGTTTGATTATTTGCTCAAGAGAGGGATTGAGGGGGATTGACAGCTCTGTGAGTGGTGGTGAAGGATTTGATGGTCTTTTGATGAGGAAGACGACTTCGTTTTGAGGTGAGAATAAAGGACCCCAAATTCTTCATCACTTTCATCATCATTATCATCATATCCTCAAATCCATCTCTTTTTACCTCTTCTTCTTTGTTGCCATTAGTTCAAGATCTCAGTGTCCTTGTCTCGCGTGTAATTTCTACATTTCTTACAGTTCTAAGTTGTTGGGTGCACCCATCTGTGGCTTCTGTTCTAACCCAACAGCCCCGATCTGTTTGTTTGCCCACCTCATTCTTTTGGTTTAAATCTTTTTTAAGAAACGAAATCAGAGATTTTGGAGATATGGGTCATTGCATCTAG

mRNA sequence

ATGGAGTCACTGTTAGAATTGGAAGGAATGCCGGCGGAGAATGAAGAAGAGAATTCGTCGTCTTACAGCCGCAAATTGGTGCCCTGGTCAACTTGGAGCGAATGGCTTTTCGTTAGTCACTCACTCTTCTCCGACTCTGTAGACTCCGTTGCCGCCGCTCTGAGCAGAATATCAACATGGAGAAGCAGAGGATGTCTTCCAGTTGTGGTTGAAGTTACAGCATCAATTATCGAAATCCAACAAAAAGATCCCTACTTCATAAAGAACCAATCGGTGGATGCTTCAGTTCGTGGTACAGAGGAACAATTAAATAATGTTTCACTTTCAGAGGAAGCACTAGCCATGTTATATTGTATGGCCATTATGAGGCTTGTAAATGGTGTTGTTGAGAAGACACGTAAGAAAACAGAGGTTTCAATTGCTGTGGCAGCTGATGCTATTGGTTTACCTCGTATGCTGATTGATATTCGTCATGAGGGCTCTCATCGCGAACTTCCATCTCTTCAGGTGGTTCGGTGTGCCTCAACCAAGGCGCTTTGTTGGTTGAAATCTTATTATTGGGGACCTCAGGAGAGAGCTATTCCATTTCAAGGTGATATAAGCACTACCATTCGAAAGGAAATCAAATCCAAACTTCGTCATTTGGCTTTCAATTTAAAAGTGAAGCAAAATCCTCAACTTGAATCTGCTCTGGTTAAGCCAAAACGTTTGAAGACAAAGGCTGCCGAGACACTGAAGGTTCTTATTCAGTTATATTCCACATTCTCTTCAGAATTTGTATCTGTATTGTTGGGATTCTTGTTAAAGGCAATGACGTCATCGGACTTGGCGTTTCCCAAAAAATCCAAGAAATCCAGCAGCCCTGTATTGGATGGATGGAAGCTTACGATTGCTAAGATCTCAAATAAGGAGCCGGAATTGCTTTTAGATCTGCTGCAGGCAGTTCTAGAGAAGATCAAGACTCAAGAAGCCTTGGAATATGAAAATCAGTACTCCATGTCCTCAGCCCACAAAATGGATAGCTGTCAAGTAGCACATCTGTCCTCTATGTTTGCATGGCTCGTTGACAAACTTAAGTGCAAAGAAGTTTTCTCTGGAAAACACACTCCAGAAGGTATTCTTATGGAGTTGCTACGTAAATGCCTCGTGGTATCAGCTCCTTACAACAAGCGGCTTATGGATTCAGCCACTGATCTTGCACACTTGTTGGATAACAGCTCTCTAGTGAAGAAACTGAAGAAACTACCATTTCTCAATCAACCAGTTTCACATTTACTGGACGAAGAAAATCCCAACCAAACCACGTCTGAAAACAGTTTCAACCAGGCCGAGTCGCTCCGCGAAGCAAGTCGGAAACTCGAGATCATTAAACTCCACAAAAGAAAGAACAACTTGGCGACGAACCCAGTAGATGGTAATGTTGGAAGTTCCAGCAGATGGACTGTGGTAAGTTCGTGGACTCCATGTCCCATTGGTATGTTGCCTCGTTCGATTGGCTGTTCAGGTCGGCTCCCTGTTCTTGACCTCGATTCCGAGAACAAACCAGGTTCGGAAGAGCTGAGAAGCAAAGAGAACTGTGAAATCACCAACTGTTGCCACAAGAGGGAAGCCAGTTCTGATATTCAGCATCTTGATAGCTGTACTGTCAAGAAAATGAAGGAAACAGATGATGTTGAGTCAGCTGAAGATGTTAAAGGGCGTTTGTTGATTGGTGGGATATGGAAGAAAGTTGGGGAACAAGAATTATCTGCCATTCAACGACTTCGTTTTGAGGTGAGAATAAAGGACCCCAAATTCTTCATCACTTTCATCATCATTATCATCATATCCTCAAATCCATCTCTTTTTACCTCTTCTTCTTTGTTGCCATTAGTTCAAGATCTCAGTGTCCTTGTCTCGCGTGTAATTTCTACATTTCTTACAGTTCTAAGTTGTTGGGTGCACCCATCTGTGGCTTCTGTTCTAACCCAACAGCCCCGATCTGTTTGTTTGCCCACCTCATTCTTTTGGTTTAAATCTTTTTTAAGAAACGAAATCAGAGATTTTGGAGATATGGGTCATTGCATCTAG

Coding sequence (CDS)

ATGGAGTCACTGTTAGAATTGGAAGGAATGCCGGCGGAGAATGAAGAAGAGAATTCGTCGTCTTACAGCCGCAAATTGGTGCCCTGGTCAACTTGGAGCGAATGGCTTTTCGTTAGTCACTCACTCTTCTCCGACTCTGTAGACTCCGTTGCCGCCGCTCTGAGCAGAATATCAACATGGAGAAGCAGAGGATGTCTTCCAGTTGTGGTTGAAGTTACAGCATCAATTATCGAAATCCAACAAAAAGATCCCTACTTCATAAAGAACCAATCGGTGGATGCTTCAGTTCGTGGTACAGAGGAACAATTAAATAATGTTTCACTTTCAGAGGAAGCACTAGCCATGTTATATTGTATGGCCATTATGAGGCTTGTAAATGGTGTTGTTGAGAAGACACGTAAGAAAACAGAGGTTTCAATTGCTGTGGCAGCTGATGCTATTGGTTTACCTCGTATGCTGATTGATATTCGTCATGAGGGCTCTCATCGCGAACTTCCATCTCTTCAGGTGGTTCGGTGTGCCTCAACCAAGGCGCTTTGTTGGTTGAAATCTTATTATTGGGGACCTCAGGAGAGAGCTATTCCATTTCAAGGTGATATAAGCACTACCATTCGAAAGGAAATCAAATCCAAACTTCGTCATTTGGCTTTCAATTTAAAAGTGAAGCAAAATCCTCAACTTGAATCTGCTCTGGTTAAGCCAAAACGTTTGAAGACAAAGGCTGCCGAGACACTGAAGGTTCTTATTCAGTTATATTCCACATTCTCTTCAGAATTTGTATCTGTATTGTTGGGATTCTTGTTAAAGGCAATGACGTCATCGGACTTGGCGTTTCCCAAAAAATCCAAGAAATCCAGCAGCCCTGTATTGGATGGATGGAAGCTTACGATTGCTAAGATCTCAAATAAGGAGCCGGAATTGCTTTTAGATCTGCTGCAGGCAGTTCTAGAGAAGATCAAGACTCAAGAAGCCTTGGAATATGAAAATCAGTACTCCATGTCCTCAGCCCACAAAATGGATAGCTGTCAAGTAGCACATCTGTCCTCTATGTTTGCATGGCTCGTTGACAAACTTAAGTGCAAAGAAGTTTTCTCTGGAAAACACACTCCAGAAGGTATTCTTATGGAGTTGCTACGTAAATGCCTCGTGGTATCAGCTCCTTACAACAAGCGGCTTATGGATTCAGCCACTGATCTTGCACACTTGTTGGATAACAGCTCTCTAGTGAAGAAACTGAAGAAACTACCATTTCTCAATCAACCAGTTTCACATTTACTGGACGAAGAAAATCCCAACCAAACCACGTCTGAAAACAGTTTCAACCAGGCCGAGTCGCTCCGCGAAGCAAGTCGGAAACTCGAGATCATTAAACTCCACAAAAGAAAGAACAACTTGGCGACGAACCCAGTAGATGGTAATGTTGGAAGTTCCAGCAGATGGACTGTGGTAAGTTCGTGGACTCCATGTCCCATTGGTATGTTGCCTCGTTCGATTGGCTGTTCAGGTCGGCTCCCTGTTCTTGACCTCGATTCCGAGAACAAACCAGGTTCGGAAGAGCTGAGAAGCAAAGAGAACTGTGAAATCACCAACTGTTGCCACAAGAGGGAAGCCAGTTCTGATATTCAGCATCTTGATAGCTGTACTGTCAAGAAAATGAAGGAAACAGATGATGTTGAGTCAGCTGAAGATGTTAAAGGGCGTTTGTTGATTGGTGGGATATGGAAGAAAGTTGGGGAACAAGAATTATCTGCCATTCAACGACTTCGTTTTGAGGTGAGAATAAAGGACCCCAAATTCTTCATCACTTTCATCATCATTATCATCATATCCTCAAATCCATCTCTTTTTACCTCTTCTTCTTTGTTGCCATTAGTTCAAGATCTCAGTGTCCTTGTCTCGCGTGTAATTTCTACATTTCTTACAGTTCTAAGTTGTTGGGTGCACCCATCTGTGGCTTCTGTTCTAACCCAACAGCCCCGATCTGTTTGTTTGCCCACCTCATTCTTTTGGTTTAAATCTTTTTTAAGAAACGAAATCAGAGATTTTGGAGATATGGGTCATTGCATCTAG

Protein sequence

MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTWRSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALCWLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTKAAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKISNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKCKEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRWTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSDIQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQRLRFEVRIKDPKFFITFIIIIIISSNPSLFTSSSLLPLVQDLSVLVSRVISTFLTVLSCWVHPSVASVLTQQPRSVCLPTSFFWFKSFLRNEIRDFGDMGHCI

Homology

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BLAST of CmoCh20G001270 vs. ExPASy Swiss-Prot
Match: Q9Y4W2 (Ribosomal biogenesis protein LAS1L OS=Homo sapiens OX=9606 GN=LAS1L PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-12
Identity = 51/164 (31.10%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 26  LVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTWRSRGC--LPVVVEVTASIIEIQQKD 85
           +V W + +EW  V+  LF D       AL+RI+ WRSR    LP+ V  TA +I  +  D
Sbjct: 42  VVAWLSRAEWDQVTVYLFCDDHKLQRYALNRITVWRSRSGNELPLAVASTADLIRCKLLD 101

Query: 86  PYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLVNGVVEKTRKKTEVSIAVA 145
                       V G         L  + L +LY MA++R VN + E+  K  +V +   
Sbjct: 102 ------------VTG--------GLGTDELRLLYGMALVRFVNLISERKTKFAKVPLKCL 161

Query: 146 ADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALCWLKSYYW 188
           A  + +P  ++D+RHE +H+++P +   R      L WL+  YW
Sbjct: 162 AQEVNIPDWIVDLRHELTHKKMPHINDCRRGCYFVLDWLQKTYW 185

[Close]

BLAST of CmoCh20G001270 vs. ExPASy Swiss-Prot
Match: A2BE28 (Ribosomal biogenesis protein LAS1L OS=Mus musculus OX=10090 GN=Las1l PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-12
Identity = 52/185 (28.11%), Postives = 86/185 (46.49%), Query Frame = 0


Query: 8   EGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTWRSR--GC 67
           +G   +  +  S S    +V W + +EW  V+  LF D       AL+RI+ WRSR    
Sbjct: 9   DGQSFKENQPESPSARGIVVSWLSRAEWEQVTVYLFCDDHKLQQYALNRITVWRSRLGNE 68

Query: 68  LPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLV 127
           LP+ V  TA ++  +  D          A   GT+E           L +LY MA++R V
Sbjct: 69  LPLAVASTADLVRCKLIDA---------AGTLGTDE-----------LRLLYGMALVRFV 128

Query: 128 NGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALCWLKSY 187
           N + E+  K + + +   A  + +P  ++++RH  +H+++P +   R      L WL+  
Sbjct: 129 NLISERKTKCSNLPLKYLAQEVNIPDWIVELRHNLTHKKMPHINECRRGCYFVLNWLQKT 173

Query: 188 YWGPQ 191
           YW  Q
Sbjct: 189 YWSRQ 173

[Close]

BLAST of CmoCh20G001270 vs. ExPASy Swiss-Prot
Match: P36146 (Protein LAS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LAS1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-11
Identity = 51/177 (28.81%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 25  KLVPWSTWSE------WLFVSHSLFSDSVDSVAAALSRISTWRSRGC--LPVVVEVTASI 84
           ++VPW  ++E      W +          D    A+ R+ ++R +G   LP VV+ TA I
Sbjct: 5   RIVPWRDFAELEELKLWFYPKSK--GTIEDKRQRAVQRVQSYRLKGSQYLPHVVDSTAQI 64

Query: 85  IEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLVNGVVEKTRK-K 144
                            A +   +E    V      + + Y MA++R VNG+++ T++ +
Sbjct: 65  ---------------TCAVLLDEKEACLGVHQDSIPIRLSYVMALIRFVNGLLDPTQQSQ 124

Query: 145 TEVSIAVAADAIGLPRMLIDIRHEGSH-RELPSLQVVRCASTKALCWLKSYYWGPQE 192
             + +   A  IGLP   +D+RH G+H R+LP L+++R A+ +AL WL  +YW  +E
Sbjct: 125 FAIPLHTLAAKIGLPSWFVDLRHWGTHERDLPGLEMLRWAANEALSWLYDHYWNDEE 164

[Close]

BLAST of CmoCh20G001270 vs. ExPASy Swiss-Prot
Match: O42936 (Pre-rRNA-processing protein las1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=las1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-10
Identity = 107/514 (20.82%), Postives = 207/514 (40.27%), Query Frame = 0


Query: 25  KLVPWSTWSEWLFVSHSLFSDSVDSV--AAALSR----ISTWRSRGCLPVVVEVTASIIE 84
           K+VPW    ++L++    +++  + +   AAL R    I  W +RG +P  VE T+ ++ 
Sbjct: 4   KVVPWRLKEDFLYLMSCFYNEGQEGIPDLAALFRGVEIIQAWSTRGRIPHSVESTSQLV- 63

Query: 85  IQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLVNGVVEKTRK-KTE 144
                                    +++  ++ +  +   ++I R V+G+++  ++ +  
Sbjct: 64  -------------------------SSLISNDRSQKLALAVSISRFVSGLLDPIQQSQYA 123

Query: 145 VSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALCWLKSYYWGP---QERAI 204
           + +AV A +I LP   +++RH  +H ELPSL V+R A+ +AL WL  +YW P    E   
Sbjct: 124 IPMAVLAKSIDLPTYFVELRHAITHEELPSLPVLRQAAQRALSWLYDHYWNPAATAESED 183

Query: 205 PFQGDISTTIRK-EIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTKAAETLKVLIQLYS 264
            +    +  + K EIK K++ L    +  +   + + +  P        +   ++ +L +
Sbjct: 184 TYDYTETNELHKFEIKRKVKDLLKQWRSWRKVNVSANMFLPVEEHDYIQQFEALVQELVT 243

Query: 265 T-------FSSEFV-----------SVLLGFLLKAMTSSDLAFPKKSKKSS--SPVLDGW 324
           T         + FV           +  L  ++       +  P ++   S    + + W
Sbjct: 244 TANLRLPYIPASFVDDEKDLDFAIETTNLDIVVSCFLEKRVLIPSRTMPISFFPKLKNVW 303

Query: 325 KLTIAKISNKE----PELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSS 384
              +  I++K     P L   L   +LE  +T ++L + +          +S    +L+ 
Sbjct: 304 LPLLQSIASKHSFFLPALFTTLWSEILEISQTVDSLVFLDLKEKEELTDKESAG-CYLAK 363

Query: 385 MFAWLVDKLKCKEVFSGK------HTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLL 444
            +A+L+     +E ++G+         +  L  +L  CL  S P+ K ++D  + L   L
Sbjct: 364 WYAYLM-----REAYTGQPWTSTLSVTQTDLASVLEICLQRSDPFTKIIIDELSILDKEL 423

Query: 445 DNSSLVKKLKKLPFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKN 498
           +N        K   L Q  S + D    ++   E  F   E +     K E+ K   R N
Sbjct: 424 EN--------KFSPLFQYRSDMFD----SRILDEQEF---EDITLEQMKTELNKFSVRLN 470

[Close]

BLAST of CmoCh20G001270 vs. ExPASy TrEMBL
Match: A0A6J1FXW7 (pre-rRNA-processing protein las1-like OS=Cucurbita moschata OX=3662 GN=LOC111448266 PE=4 SV=1)

HSP 1 Score: 1136.7 bits (2939), Expect = 0.0e+00
Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK
Sbjct: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
           AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI
Sbjct: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360
           SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC
Sbjct: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360

Query: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420
           KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ
Sbjct: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420

Query: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480
           PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW
Sbjct: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480

Query: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540
           TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD
Sbjct: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540

Query: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ
Sbjct: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 586

[Close]

BLAST of CmoCh20G001270 vs. ExPASy TrEMBL
Match: A0A6J1J8U9 (pre-rRNA-processing protein las1-like OS=Cucurbita maxima OX=3661 GN=LOC111483646 PE=4 SV=1)

HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 564/586 (96.25%), Postives = 570/586 (97.27%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLELEGMPAE EEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELEGMPAEYEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYFIKN SVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNLSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELP+LQVV CASTKALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPALQVVWCASTKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYWGPQE+AI FQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESAL+KPKRLKTK
Sbjct: 181 WLKSYYWGPQEKAISFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALIKPKRLKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
            AETLKVLIQLYSTFSSEFVSVLLGFL KAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI
Sbjct: 241 TAETLKVLIQLYSTFSSEFVSVLLGFLFKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360
           SNKEPELLLDLLQAVLEKIKTQEALEYE+QYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC
Sbjct: 301 SNKEPELLLDLLQAVLEKIKTQEALEYESQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360

Query: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420
           KEVFSGKHTPEGILMELLRKCLVVSAP NKRLMDSATDLAHLLDNSSLVKKLKKL FLNQ
Sbjct: 361 KEVFSGKHTPEGILMELLRKCLVVSAPCNKRLMDSATDLAHLLDNSSLVKKLKKLSFLNQ 420

Query: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480
           PVSHLLDEENPNQ TSEN FNQAESLREASRKLEIIKLHKRKNNLATNPV+GNV SSSRW
Sbjct: 421 PVSHLLDEENPNQITSENGFNQAESLREASRKLEIIKLHKRKNNLATNPVNGNVRSSSRW 480

Query: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540
           TVVSSWTPCPIGMLPRSIGCSG+LPVLD DSENKPGSEELRSKENCE TNC HKREASSD
Sbjct: 481 TVVSSWTPCPIGMLPRSIGCSGQLPVLDTDSENKPGSEELRSKENCEATNCSHKREASSD 540

Query: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           IQHLDSCTVKKMKETD VESAEDVKGRLLI GIWKKVGEQELSAIQ
Sbjct: 541 IQHLDSCTVKKMKETDGVESAEDVKGRLLIDGIWKKVGEQELSAIQ 586

[Close]

BLAST of CmoCh20G001270 vs. ExPASy TrEMBL
Match: A0A1S3BNF1 (pre-rRNA-processing protein las1 OS=Cucumis melo OX=3656 GN=LOC103491463 PE=4 SV=1)

HSP 1 Score: 930.6 bits (2404), Expect = 3.7e-267
Identity = 496/600 (82.67%), Postives = 532/600 (88.67%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           M+SLL  E +  ENEEEN S+YSRKLVPWSTW+EWLFVS SLFSDS D VAAALSRISTW
Sbjct: 1   MDSLLGFEEVLGENEEENLSTYSRKLVPWSTWNEWLFVSQSLFSDSPDFVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYFIKNQS+DASVRGTE QLN VSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSIDASVRGTENQLNIVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPR+LIDIRHEGSHRELP+LQVVR AS KALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRLLIDIRHEGSHRELPALQVVRHASAKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYW PQE+AIPFQGDIST+IRKEIKSKLR LAFNL+VKQNPQLESALVKPKRLKTK
Sbjct: 181 WLKSYYWEPQEKAIPFQGDISTSIRKEIKSKLRVLAFNLEVKQNPQLESALVKPKRLKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
             +T+KVLIQLYSTF SEFVSVLL FLLKAM SSDLAFPK SKKSSS VLDGWKLT+AKI
Sbjct: 241 TGKTMKVLIQLYSTFPSEFVSVLLEFLLKAMRSSDLAFPKNSKKSSSSVLDGWKLTVAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKL-- 360
           SNKEPELLLDLL+AVLEKIKTQ ALEYE+QY M S HK++SCQV  LSS+FAWLVDKL  
Sbjct: 301 SNKEPELLLDLLEAVLEKIKTQVALEYESQYFMPSDHKVESCQVVQLSSLFAWLVDKLNG 360

Query: 361 -KCK---EVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKK 420
            K K   EVFSGKH P+GILMELLRKCL+VSAP+NKRL+DSATDLA LLD+ SLVKKL K
Sbjct: 361 IKLKRKGEVFSGKHIPKGILMELLRKCLLVSAPWNKRLLDSATDLAQLLDDDSLVKKLNK 420

Query: 421 LPFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNV 480
           L F+N P+S + D ENPNQT SENSFNQAESLREASRKLE+IKL KRKNNLA+NPVDGNV
Sbjct: 421 LSFVNVPISPIPDGENPNQTASENSFNQAESLREASRKLEMIKLRKRKNNLASNPVDGNV 480

Query: 481 GSSSRWTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHK 540
           G SSRWTVVSSWTPCPIGMLPRSIGCSGRL VLDL+ EN+P SEE RSK+N  + N  HK
Sbjct: 481 GCSSRWTVVSSWTPCPIGMLPRSIGCSGRLSVLDLNPENEPASEEPRSKDNRALNNSSHK 540

Query: 541 REASSDIQHLDSCTVKKMK--------ETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           REASSDIQHLDS  VKKMK        ET+DVES E ++GRLLIGGIWKKVGE+ELSAIQ
Sbjct: 541 REASSDIQHLDSSIVKKMKETNDKSQFETEDVESPEGIEGRLLIGGIWKKVGEEELSAIQ 600

[Close]

BLAST of CmoCh20G001270 vs. ExPASy TrEMBL
Match: A0A0A0KI89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430640 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.4e-266
Identity = 491/600 (81.83%), Postives = 533/600 (88.83%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           M+SLL  E +P ENEEEN S+YSRKLVPWSTW+EWLFVS SLFSDS DSVAAALSRISTW
Sbjct: 127 MDSLLGFEEVPGENEEENLSTYSRKLVPWSTWNEWLFVSQSLFSDSPDSVAAALSRISTW 186

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RS+GCLPVV+EVTASIIEIQQKDPYFIKNQS+DASVRGTE QLN VSLSEEALAMLYCMA
Sbjct: 187 RSKGCLPVVIEVTASIIEIQQKDPYFIKNQSMDASVRGTENQLNLVSLSEEALAMLYCMA 246

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPR+LIDIRHEGSHRELP+LQ+VR AS KALC
Sbjct: 247 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRLLIDIRHEGSHRELPALQMVRHASAKALC 306

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYW PQE+AIPFQGDIST+IRKEIKSKLR LAFNL++KQNPQLESA+VKPKRLKTK
Sbjct: 307 WLKSYYWEPQEKAIPFQGDISTSIRKEIKSKLRGLAFNLEMKQNPQLESAVVKPKRLKTK 366

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
             +TLKVLIQLYSTFSSEFVSVLL FLLKAM SSDLAFPK SKKSSS VLDGWKLT+AKI
Sbjct: 367 TGKTLKVLIQLYSTFSSEFVSVLLEFLLKAMRSSDLAFPKNSKKSSSSVLDGWKLTVAKI 426

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKL-- 360
           SNKEPELLLDLL+AVLEKIKTQ ALEYE+QY + S HKM+SCQVA LSS+FAWLVDKL  
Sbjct: 427 SNKEPELLLDLLEAVLEKIKTQVALEYESQYFLPSDHKMESCQVAQLSSLFAWLVDKLNG 486

Query: 361 -KCK---EVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKK 420
            K K   EVFSGKH P+G+LMELLRKCL+VSAP+NKRL+DSAT+LA LLD+ SLVKKL K
Sbjct: 487 IKLKRKGEVFSGKHIPKGVLMELLRKCLLVSAPWNKRLLDSATNLAQLLDDDSLVKKLNK 546

Query: 421 LPFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNV 480
           L F+N P+S + DEENPN + SE+SFNQAESLREASRKLE IKL KRKNNLA+NPVDGNV
Sbjct: 547 LFFVNAPISSIPDEENPNHSASEDSFNQAESLREASRKLETIKLRKRKNNLASNPVDGNV 606

Query: 481 GSSSRWTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHK 540
           G SSRWTVVSSWTPCPIGMLPRSIGCSGR  VLDL+ EN+P SEELRSKE CE+ N   K
Sbjct: 607 GGSSRWTVVSSWTPCPIGMLPRSIGCSGRPSVLDLNPENEPTSEELRSKEKCELNNSSQK 666

Query: 541 REASSDIQHLDSCTVKKMK--------ETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           REASSDI HLD+  VKKMK        ET+DVES E +KGRLLIGGIWK VGE+ELSAIQ
Sbjct: 667 REASSDIHHLDNSIVKKMKDTNDKSQLETEDVESPEGIKGRLLIGGIWKNVGEEELSAIQ 726

[Close]

BLAST of CmoCh20G001270 vs. ExPASy TrEMBL
Match: A0A5A7V7Q2 (Pre-rRNA-processing protein las1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001390 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 2.9e-264
Identity = 498/623 (79.94%), Postives = 533/623 (85.55%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSR---- 60
           M+SLL  E +  ENEEEN S+YSRKLVPWSTW+EWLFVS SLFSDS DSVAAALSR    
Sbjct: 1   MDSLLGFEEVLGENEEENLSTYSRKLVPWSTWNEWLFVSQSLFSDSPDSVAAALSRVSLL 60

Query: 61  -------------------ISTWRSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVR 120
                              ISTWRSRGCLPVVVEVTASIIEIQQKDPYFIKNQS+DASVR
Sbjct: 61  ISAACLCSVVLTFEVALGPISTWRSRGCLPVVVEVTASIIEIQQKDPYFIKNQSIDASVR 120

Query: 121 GTEEQLNNVSLSEEALAMLYCMAIMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIR 180
           GTE QLN VSLSEEALAMLYCMAIMRLVNGVVEKTRKKTEVSIAVAADAIGLPR+LIDIR
Sbjct: 121 GTENQLNIVSLSEEALAMLYCMAIMRLVNGVVEKTRKKTEVSIAVAADAIGLPRLLIDIR 180

Query: 181 HEGSHRELPSLQVVRCASTKALCWLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAF 240
           HEGSHRELP+LQVVR AS KALCWLKSYYW PQE+AIPFQGDIST+IRKEIKSKLR LAF
Sbjct: 181 HEGSHRELPALQVVRHASAKALCWLKSYYWEPQEKAIPFQGDISTSIRKEIKSKLRVLAF 240

Query: 241 NLKVKQNPQLESALVKPKRLKTKAAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLA 300
           NL+VKQNPQLESALVKPKRLKTK  + +KVLIQLYSTFSSEFVSVLL FLLKAM SSDLA
Sbjct: 241 NLEVKQNPQLESALVKPKRLKTKTGKIMKVLIQLYSTFSSEFVSVLLEFLLKAMRSSDLA 300

Query: 301 FPKKSKKSSSPVLDGWKLTIAKISNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAH 360
           FPK SKKSSS VLDGWKLT+AKISNKEPELLLDLL+AVLEKIKTQ ALEYE+QY M S H
Sbjct: 301 FPKNSKKSSSSVLDGWKLTVAKISNKEPELLLDLLEAVLEKIKTQVALEYESQYFMPSDH 360

Query: 361 KMDSCQVAHLSSMFAWLVDKL---KCK---EVFSGKHTPEGILMELLRKCLVVSAPYNKR 420
           K++SCQV  LSS+FAWLVDKL   K K   EVFSGKH P+GILMELLRKCL+VSAP+NKR
Sbjct: 361 KVESCQVVQLSSLFAWLVDKLNGIKLKRKGEVFSGKHIPKGILMELLRKCLLVSAPWNKR 420

Query: 421 LMDSATDLAHLLDNSSLVKKLKKLPFLNQPVSHLLDEENPNQTTSENSFNQAESLREASR 480
           L+DSATDLA LLD+ SLVKKL KL F+N P+S + D ENPNQT SENSFNQAESLREASR
Sbjct: 421 LLDSATDLAQLLDDDSLVKKLNKLSFVNVPISPIPDGENPNQTASENSFNQAESLREASR 480

Query: 481 KLEIIKLHKRKNNLATNPVDGNVGSSSRWTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDS 540
           KLE+IKL KRKNNLA+NPVDGNVG SSRWTVVSSWTPCPIGMLPRSIGCSGRL VLDL+ 
Sbjct: 481 KLEMIKLRKRKNNLASNPVDGNVGGSSRWTVVSSWTPCPIGMLPRSIGCSGRLSVLDLNP 540

Query: 541 ENKPGSEELRSKENCEITNCCHKREASSDIQHLDSCTVKKMK--------ETDDVESAED 587
           EN+P SEE RSKEN  + N  HKREASSDIQHLDS  VKKMK        ET+DVES E 
Sbjct: 541 ENEPASEEPRSKENRALNNSSHKREASSDIQHLDSSIVKKMKETNDKSQFETEDVESPEG 600

[Close]

BLAST of CmoCh20G001270 vs. NCBI nr
Match: XP_022943515.1 (pre-rRNA-processing protein las1-like [Cucurbita moschata] >XP_022943516.1 pre-rRNA-processing protein las1-like [Cucurbita moschata])

HSP 1 Score: 1136.7 bits (2939), Expect = 0.0e+00
Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK
Sbjct: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
           AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI
Sbjct: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360
           SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC
Sbjct: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360

Query: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420
           KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ
Sbjct: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420

Query: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480
           PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW
Sbjct: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480

Query: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540
           TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD
Sbjct: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540

Query: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ
Sbjct: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 586

[Close]

BLAST of CmoCh20G001270 vs. NCBI nr
Match: KAG6570427.1 (Ribosomal biogenesis protein LAS1L, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 580/586 (98.98%), Postives = 583/586 (99.49%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYF+KNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFLKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYWGPQE+AIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK
Sbjct: 181 WLKSYYWGPQEKAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
            AETLKVLIQLYSTFSSEFVSVLLGFL KAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI
Sbjct: 241 TAETLKVLIQLYSTFSSEFVSVLLGFLSKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360
           SNKEPELLLDLLQAVLEKIKTQEALEYE+QYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC
Sbjct: 301 SNKEPELLLDLLQAVLEKIKTQEALEYESQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360

Query: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420
           KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ
Sbjct: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420

Query: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480
           PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW
Sbjct: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480

Query: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540
           TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD
Sbjct: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540

Query: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           IQHLDSCTVKKMKET DVESAEDVKGRLLIGGIWKKVGEQELSAIQ
Sbjct: 541 IQHLDSCTVKKMKETGDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 586

[Close]

BLAST of CmoCh20G001270 vs. NCBI nr
Match: XP_023512836.1 (pre-rRNA-processing protein las1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1104.7 bits (2856), Expect = 0.0e+00
Identity = 571/587 (97.27%), Postives = 578/587 (98.47%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLEL+GMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELKGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLP+VVEVTASIIEIQQKDPYF KNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPIVVEVTASIIEIQQKDPYFRKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYWGPQE+AIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKR KTK
Sbjct: 181 WLKSYYWGPQEKAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRFKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
            AETLKVLIQLYSTFSSEFVSVLLG LLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI
Sbjct: 241 TAETLKVLIQLYSTFSSEFVSVLLGLLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360
           SNKEPELLLDLLQAVLEKI+TQEALEYE+QYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC
Sbjct: 301 SNKEPELLLDLLQAVLEKIRTQEALEYESQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360

Query: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420
           KEVFSGKHTPEGILMELLRKCLVVSAP NKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ
Sbjct: 361 KEVFSGKHTPEGILMELLRKCLVVSAPCNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420

Query: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVG-SSSR 480
           PV HLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPV+GNVG SSSR
Sbjct: 421 PVPHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVNGNVGSSSSR 480

Query: 481 WTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASS 540
           WTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCE+TNC HKRE SS
Sbjct: 481 WTVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEVTNCSHKREGSS 540

Query: 541 DIQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           DIQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ
Sbjct: 541 DIQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587

[Close]

BLAST of CmoCh20G001270 vs. NCBI nr
Match: XP_022985650.1 (pre-rRNA-processing protein las1-like [Cucurbita maxima] >XP_022985651.1 pre-rRNA-processing protein las1-like [Cucurbita maxima])

HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 564/586 (96.25%), Postives = 570/586 (97.27%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLELEGMPAE EEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELEGMPAEYEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYFIKN SVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNLSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALC 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELP+LQVV CASTKALC
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPALQVVWCASTKALC 180

Query: 181 WLKSYYWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK 240
           WLKSYYWGPQE+AI FQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESAL+KPKRLKTK
Sbjct: 181 WLKSYYWGPQEKAISFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALIKPKRLKTK 240

Query: 241 AAETLKVLIQLYSTFSSEFVSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300
            AETLKVLIQLYSTFSSEFVSVLLGFL KAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI
Sbjct: 241 TAETLKVLIQLYSTFSSEFVSVLLGFLFKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKI 300

Query: 301 SNKEPELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360
           SNKEPELLLDLLQAVLEKIKTQEALEYE+QYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC
Sbjct: 301 SNKEPELLLDLLQAVLEKIKTQEALEYESQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKC 360

Query: 361 KEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLNQ 420
           KEVFSGKHTPEGILMELLRKCLVVSAP NKRLMDSATDLAHLLDNSSLVKKLKKL FLNQ
Sbjct: 361 KEVFSGKHTPEGILMELLRKCLVVSAPCNKRLMDSATDLAHLLDNSSLVKKLKKLSFLNQ 420

Query: 421 PVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSSRW 480
           PVSHLLDEENPNQ TSEN FNQAESLREASRKLEIIKLHKRKNNLATNPV+GNV SSSRW
Sbjct: 421 PVSHLLDEENPNQITSENGFNQAESLREASRKLEIIKLHKRKNNLATNPVNGNVRSSSRW 480

Query: 481 TVVSSWTPCPIGMLPRSIGCSGRLPVLDLDSENKPGSEELRSKENCEITNCCHKREASSD 540
           TVVSSWTPCPIGMLPRSIGCSG+LPVLD DSENKPGSEELRSKENCE TNC HKREASSD
Sbjct: 481 TVVSSWTPCPIGMLPRSIGCSGQLPVLDTDSENKPGSEELRSKENCEATNCSHKREASSD 540

Query: 541 IQHLDSCTVKKMKETDDVESAEDVKGRLLIGGIWKKVGEQELSAIQ 587
           IQHLDSCTVKKMKETD VESAEDVKGRLLI GIWKKVGEQELSAIQ
Sbjct: 541 IQHLDSCTVKKMKETDGVESAEDVKGRLLIDGIWKKVGEQELSAIQ 586

[Close]

BLAST of CmoCh20G001270 vs. NCBI nr
Match: KAG7010302.1 (Ribosomal biogenesis protein LAS1L, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1068.5 bits (2762), Expect = 2.3e-308
Identity = 579/711 (81.43%), Postives = 583/711 (82.00%), Query Frame = 0


Query: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60
           MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW
Sbjct: 1   MESLLELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTW 60

Query: 61  RSRGCLPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120
           RSRGCLPVVVEVTASIIEIQQKDPYF+KNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA
Sbjct: 61  RSRGCLPVVVEVTASIIEIQQKDPYFLKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMA 120

Query: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCAST---- 180
           IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCAST    
Sbjct: 121 IMRLVNGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKDSA 180

Query: 181 -------------------------------------KALCWLKSYYWGPQERAIPFQGD 240
                                                KALCWLKSYYWGPQE+AIPFQGD
Sbjct: 181 SSLAHCPVPSSDTICKQSKLTANIYCPLWVFPFGLSLKALCWLKSYYWGPQEKAIPFQGD 240

Query: 241 ISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTKAAETLKVLIQLYSTFSSEF 300
           ISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTK AETLKVLIQLYSTFSSEF
Sbjct: 241 ISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTKTAETLKVLIQLYSTFSSEF 300

Query: 301 VSVLLGFLLKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKISNKEPELLLDLLQAVLEKI 360
           VSVLLGFL KAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKISNKEPELLLDLLQAVLEKI
Sbjct: 301 VSVLLGFLSKAMTSSDLAFPKKSKKSSSPVLDGWKLTIAKISNKEPELLLDLLQAVLEKI 360

Query: 361 KTQEALEY---------------------------------------------------- 420
           KTQEALEY                                                    
Sbjct: 361 KTQEALEYGRIKYQPSNPFRFSELYDEAVAFTWLVTVLPLPLGVSFWAIIEPHWTISTSG 420

Query: 421 --------------------------------ENQYSMSSAHKMDSCQVAHLSSMFAWLV 480
                                           ++QYSMSSAHKMDSCQVAHLSSMFAWLV
Sbjct: 421 GLELLQMVSKPDTGQCDSEDAGPPRRVDCEIPQSQYSMSSAHKMDSCQVAHLSSMFAWLV 480

Query: 481 DKLKCKEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKL 540
           DKLKCKEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKL
Sbjct: 481 DKLKCKEVFSGKHTPEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKL 540

Query: 541 PFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVG 587
           PFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVG
Sbjct: 541 PFLNQPVSHLLDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVG 600

[Close]

BLAST of CmoCh20G001270 vs. TAIR 10
Match: AT5G12220.1 (las1-like family protein )

HSP 1 Score: 375.9 bits (964), Expect = 6.8e-104
Identity = 245/615 (39.84%), Postives = 350/615 (56.91%), Query Frame = 0


Query: 6   ELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTWRSRGC 65
           ++E    E +++ SS    K VPW +W EW  V  SLFS S D +A+AL R++TWRSRG 
Sbjct: 10  DIESYFGEQDQQKSSPDGCKQVPWLSWEEWDSVRESLFSSSPDRIASALERVATWRSRGS 69

Query: 66  LPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLV 125
           LP  V+VT S+IEIQ KD +  +           E+Q  +   SE  L MLYCM I+RLV
Sbjct: 70  LPAPVDVTCSLIEIQLKDGFIPR-----------EKQSADALYSEHLLQMLYCMGILRLV 129

Query: 126 NGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALCWLKSY 185
           N V+EKTR++ +VSIA AA AIG+PR LID+RHEGSHRELP+L V+R A+ +AL WLKSY
Sbjct: 130 NCVIEKTRRREDVSIADAARAIGIPRKLIDLRHEGSHRELPALSVLRDAADEALEWLKSY 189

Query: 186 YWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTKAAETL 245
           YW  Q+  IP + D + +IR+E+KSKLR LAF+L++K+NPQ +S LVK K    +  + +
Sbjct: 190 YWEQQKYQIPLKRDGTASIRREVKSKLRKLAFSLQLKRNPQFDSPLVKEKCSNKRIRKIV 249

Query: 246 KVLIQLYSTFSSEFVSVLLGFLLKAMTSS-DLAFPKKSKKSSSPVLDGWKLTIAKISNKE 305
             L++LY +FS+E  SVLL FLLKA+ SS       K+ +     LD WK  I ++SN+E
Sbjct: 250 SSLVELYPSFSAEISSVLLEFLLKALDSSKSTDLQNKAGQDFRVFLDEWKPVIMELSNRE 309

Query: 306 PELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKCKEVF 365
           PELLL LL+ VL+ I+  E   +E +  +      +  QV  +  +FAWLV  L   + F
Sbjct: 310 PELLLTLLKEVLDMIQNNERRRHETEKPVE-----EVSQVEQVPFLFAWLVSLLNGSKHF 369

Query: 366 SGKHT-----PEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLN 425
               +     P   LMEL+R+CLV+ A   + ++ SA  LA ++    L +KL KLP ++
Sbjct: 370 QRNSSLEVKPPSIFLMELIRRCLVLGALGYELVLKSAFLLAEIVGGRVLKEKLIKLPLMH 429

Query: 426 QPVSHL-LDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSS 485
           +  + + L + +   T S     Q ++L  A ++LE +KL   K         GN     
Sbjct: 430 KSSAIVPLKQSSTLVTASTTLLEQEKNLGNAGKRLEFVKLQLSKKKGIDTDKTGN----- 489

Query: 486 RWTVVSSWTPCPIGMLPRSIGCSGRLPVLDL------------DSENKPGSEELRSK--- 545
           RW    +W+PCPIGMLPR IG SGRLP+LD             ++  K G+E  R++   
Sbjct: 490 RWRKAKTWSPCPIGMLPRIIGSSGRLPLLDNQNAKSISKQAQGNNNAKRGAECNRNQLEK 549

Query: 546 -------------ENCEITNCCHKREASSDIQHLDSCTVKKMKETDDVESAEDVKGRLLI 586
                        E+ ++T   ++ EA  +I+H    T    +E       E+ +  L+I
Sbjct: 550 SPCKRARKSAGDSESNDVTLESYEEEAEMEIEHAYEETETVAEENLMWNDEEESRSCLMI 603

[Close]

BLAST of CmoCh20G001270 vs. TAIR 10
Match: AT5G12220.2 (las1-like family protein )

HSP 1 Score: 349.0 bits (894), Expect = 8.8e-96
Identity = 237/615 (38.54%), Postives = 340/615 (55.28%), Query Frame = 0


Query: 6   ELEGMPAENEEENSSSYSRKLVPWSTWSEWLFVSHSLFSDSVDSVAAALSRISTWRSRGC 65
           ++E    E +++ SS    K VPW +W EW  V  SLFS S D +A+AL R++TWRSRG 
Sbjct: 10  DIESYFGEQDQQKSSPDGCKQVPWLSWEEWDSVRESLFSSSPDRIASALERVATWRSRGS 69

Query: 66  LPVVVEVTASIIEIQQKDPYFIKNQSVDASVRGTEEQLNNVSLSEEALAMLYCMAIMRLV 125
           LP  V+VT S+IEIQ KD +  +           E+Q  +   SE  L MLYCM I+RLV
Sbjct: 70  LPAPVDVTCSLIEIQLKDGFIPR-----------EKQSADALYSEHLLQMLYCMGILRLV 129

Query: 126 NGVVEKTRKKTEVSIAVAADAIGLPRMLIDIRHEGSHRELPSLQVVRCASTKALCWLKSY 185
           N V+EKTR++ +VSIA AA AI           EGSHRELP+L V+R A+ +AL WLKSY
Sbjct: 130 NCVIEKTRRREDVSIADAARAI-----------EGSHRELPALSVLRDAADEALEWLKSY 189

Query: 186 YWGPQERAIPFQGDISTTIRKEIKSKLRHLAFNLKVKQNPQLESALVKPKRLKTKAAETL 245
           YW  Q+  IP + D + +IR+E+KSKLR LAF+L++K+NPQ +S LVK K    +  + +
Sbjct: 190 YWEQQKYQIPLKRDGTASIRREVKSKLRKLAFSLQLKRNPQFDSPLVKEKCSNKRIRKIV 249

Query: 246 KVLIQLYSTFSSEFVSVLLGFLLKAMTSS-DLAFPKKSKKSSSPVLDGWKLTIAKISNKE 305
             L++LY +FS+E  SVLL FLLKA+ SS       K+ +     LD WK  I ++SN+E
Sbjct: 250 SSLVELYPSFSAEISSVLLEFLLKALDSSKSTDLQNKAGQDFRVFLDEWKPVIMELSNRE 309

Query: 306 PELLLDLLQAVLEKIKTQEALEYENQYSMSSAHKMDSCQVAHLSSMFAWLVDKLKCKEVF 365
           PELLL LL+ VL+ I+  E   +E +  +      +  QV  +  +FAWLV  L   + F
Sbjct: 310 PELLLTLLKEVLDMIQNNERRRHETEKPVE-----EVSQVEQVPFLFAWLVSLLNGSKHF 369

Query: 366 SGKHT-----PEGILMELLRKCLVVSAPYNKRLMDSATDLAHLLDNSSLVKKLKKLPFLN 425
               +     P   LMEL+R+CLV+ A   + ++ SA  LA ++    L +KL KLP ++
Sbjct: 370 QRNSSLEVKPPSIFLMELIRRCLVLGALGYELVLKSAFLLAEIVGGRVLKEKLIKLPLMH 429

Query: 426 QPVSHL-LDEENPNQTTSENSFNQAESLREASRKLEIIKLHKRKNNLATNPVDGNVGSSS 485
           +  + + L + +   T S     Q ++L  A ++LE +KL   K         GN     
Sbjct: 430 KSSAIVPLKQSSTLVTASTTLLEQEKNLGNAGKRLEFVKLQLSKKKGIDTDKTGN----- 489

Query: 486 RWTVVSSWTPCPIGMLPRSIGCSGRLPVLDL------------DSENKPGSEELRSK--- 545
           RW    +W+PCPIGMLPR IG SGRLP+LD             ++  K G+E  R++   
Sbjct: 490 RWRKAKTWSPCPIGMLPRIIGSSGRLPLLDNQNAKSISKQAQGNNNAKRGAECNRNQLEK 549

Query: 546 -------------ENCEITNCCHKREASSDIQHLDSCTVKKMKETDDVESAEDVKGRLLI 586
                        E+ ++T   ++ EA  +I+H    T    +E       E+ +  L+I
Sbjct: 550 SPCKRARKSAGDSESNDVTLESYEEEAEMEIEHAYEETETVAEENLMWNDEEESRSCLMI 592

The following BLAST results are available for this feature:

BLAST of CmoCh20G001270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y4W2	2.0e-12	31.10	Ribosomal biogenesis protein LAS1L OS=Homo sapiens OX=9606 GN=LAS1L PE=1 SV=2	[more]
A2BE28	2.0e-12	28.11	Ribosomal biogenesis protein LAS1L OS=Mus musculus OX=10090 GN=Las1l PE=1 SV=1	[more]
P36146	1.0e-11	28.81	Protein LAS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
O42936	9.4e-10	20.82	Pre-rRNA-processing protein las1 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of CmoCh20G001270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXW7	0.0e+00	100.00	pre-rRNA-processing protein las1-like OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1J8U9	0.0e+00	96.25	pre-rRNA-processing protein las1-like OS=Cucurbita maxima OX=3661 GN=LOC11148364...	[more]
A0A1S3BNF1	3.7e-267	82.67	pre-rRNA-processing protein las1 OS=Cucumis melo OX=3656 GN=LOC103491463 PE=4 SV...	[more]
A0A0A0KI89	1.4e-266	81.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430640 PE=4 SV=1	[more]
A0A5A7V7Q2	2.9e-264	79.94	Pre-rRNA-processing protein las1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of CmoCh20G001270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943515.1	0.0e+00	100.00	pre-rRNA-processing protein las1-like [Cucurbita moschata] >XP_022943516.1 pre-r...	[more]
KAG6570427.1	0.0e+00	98.98	Ribosomal biogenesis protein LAS1L, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023512836.1	0.0e+00	97.27	pre-rRNA-processing protein las1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985650.1	0.0e+00	96.25	pre-rRNA-processing protein las1-like [Cucurbita maxima] >XP_022985651.1 pre-rRN...	[more]
KAG7010302.1	2.3e-308	81.43	Ribosomal biogenesis protein LAS1L, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of CmoCh20G001270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12220.1	6.8e-104	39.84	las1-like family protein	[more]
AT5G12220.2	8.8e-96	38.54	las1-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007174	Las1	PFAM	PF04031	Las1	coord: 27..187 e-value: 5.3E-40 score: 137.0
IPR007174	Las1	PANTHER	PTHR15002	UNCHARACTERIZED	coord: 18..586

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G001270.1	CmoCh20G001270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0090730	Las1 complex
molecular_function	GO:0004519	endonuclease activity