CmoCh20G000920 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G000920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Nuclear transcription factor Y subunit
Location	Cmo_Chr20: 465885 .. 471129 (+)
RNA-Seq Expression	CmoCh20G000920
Synteny	CmoCh20G000920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGACCCTCACCACCCACGTCAACTGGGAACCTGCTTTAGCCGGTTCACTCGGCTCACAGGCATCCACTTAGATAGCCTAGTTCGAAACTGGAAGAGGAGGTCGCCGGTGGAAGACCAGCTGGAACTGAAGTCGGGTCCCGCAGTGGGTAAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCACAAGGGCCTTCGCTTTGGCACTGTAGTTACAGTGCTCTCTCTTAAGTATGAGAATCGTTGAAGAACTGGATTGAGTCTTCGATTTCTCTTTCTGTTTCTCTCTTTTCCGAGATTCCGAGTGGTTGCGTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCCTCCAAGTGAGTTCTTCTCTTCGTCTGACTTGACTTTGCAAGATTTTGGTTCCTTTTTCTTCTCTTTCTCGTGTATCTAATGTTACTCCAGGGTTTTCTCAATTCAGTTCTTTATCTTCCTTTTTTTGGGTTCTGTTTATTCTCGTTGCATGAAAGCGCGCCGGTTTGAGTTTCTGGATTCATGCGACTAGGATTTGGGTTTTTGGATCACTAGAGTGGAAAATTTCAACTGGTGGTGTTCCTTTGTTTAGGGAAGGGAGTGGAATTGGGATCTTGATGGGATATTTAGAAGTCGTAAGTTCGGGGATTTTTGTTCTTATTTTTTAGGATTGAACTCGCACCGTCGTATTCAGTTTTGCTCCTTCATCTGTCCCATCTTTTGGCATTGGGTTCTGTTTGTTGTCTGCATGTGGGGATTATGGTTCGTACAGTCCTTATTGGCGGAATTTTGGTTGGAATATCAGTCGCCAAATATCGAAGTGAACGTTTTCTATAGAACGCTATTAGTTACCCCTGCCCTTGCGTGTGGATCATTAATGAGCTGAACTGAAATGCTAAAGAGAACTTATTTAGTACAAGATATTAACTATGATTTGATATTTGGGTGGAGCGTTTTAGGATGATTCGTCAATATAAGCATGCCACTTTTTCCCCTCTCGTTGTCATTTCTGAGTTGTGGTTGGAAGAGTGATAGAAAAAGGTCGCCTATGATAATTTATAGTCTAGCATGGAAATAAATCGAGCACCAAAATAGGATACGACGGTGGAAATAGATAACAGAAGTTGTTTTGAAACTAGTATGGAAATAAATAGAGCTCCGCTCAACATTACGGGAATTGGTTTATGATTTGAATTATAGATCGTGGATGATCTTGGCTTTCCGTTGAGTTTTTTGGATATGCTGCACTTCTGTCTCTTCAAAATTGAAAATTTACGAGTTCCAAGTTGTGTCCGAAATTATGCAGTTGCAAAATAAGAACTTTTTTGGTTTCTGTCTCTGTTATCATAGAACTCAATTGATGATAAATAAACAACTTAGCTTGGAAGATCTGAAGGAATTAATTAAAGGTGTAGAGCATTTTACTTCCAATTTGGTGATAAGCCTAGTCAAGCGGAAAAATGAGCAGTGCTCTGCACAAGGATTGGATATAGTTAAAGTATGCTCTGGGAAAGAGTTATGTAATCATAATTGGAAGGAAATAAAAAACGTAGTTGATCGATAAGGATGGCACTTGCTTGTGCTTGAGCTTAAGCTTTTCTTTGTGATTATCTCCTAGCCTTTCCCTCTATTTTCTCTCAGCTTCCTGACTATTAAACCGCCTCCAATTTGACAGAAAACTATTGCCTCCCTCATCTCAGACCATTTAATTTAAAACTGTAAGCAAAACTGCTTCAGCTGGCTGGTGAATATTCTTCTTTTTAATTTCCTTCTCTCACACGTGTTATTTTAAATCGAAGGAATCAAACAATTTCCCCTTATCTTGAGAAAAGAATAATGAGCATGGACGATTTCTAAGGTTTTCAAAATGAACGATGCTTCGTGGTTCCTCTTTTCCTTTTGATGTCTCCTTTCCGGTGCTTTTATCATAGGGTGACAGCTTGTTCTCTGTTTATCCAACATTTATTTTGCATGGCCTATGTATTCTAGTTGACTCCATCCTTTTATCTTATCTAACACATATATTTGCGAGGAAGATATGCAGTCAAAGCCTAGAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGATACAATCAGATTTCCCCGCCAGCAGCAGGAGGAAATTTGTCCAATTCAACATCACTGGAATGTCCTAATGGTGCCTCAGAATCTAATGACGGACCATCAATGTCAAATGATGATTTGAATGAAGATGATGATGATGACACCACAAAAGATTCACACGGTATGGGTCTCAACTTACCTGCTTACTAAATCATGTTATTGTTCAAAGTAAGGCACTTATTGTTTTTAGACTCCTTAGTTATGAGCTGGAATTAGTGTACATGATCTTGAAAACTGAGGACAATATAACCTTATTGGATTGTTAACAAACATGTTATTATCGATTCAGCTGTAAGTTATGGGCAAGTACAGAACAACAGTCAGCATGCTGTTTCTGCTGCACCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCATTTGCTAGTCTGGTTTTTTCTACTTTATAGATGTCCTTCTGACTCTCAGTGTCCAATTTTTTAATATTGAACAACATTCGTTTCTTGAAACATCATATTTAAGATGCTTTTAAATTATGTGGGATTACTAGTTTATGTTGATCTTTTTCAGGCATGTGCATCAAACCTATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGTATGTGGGTTAAGAAAATAAAAGATCAGATGATGATATGTACACGTATATATGTATATCTTACTGGTAATTTTTGCACCATGTTCACAATTTTTTTAATTATATTTTAGCCCTGGGTAAACTTGATGGTACTATACCTTTTGCATCACTTTTTTATTTTTATTTTTTTATTTTTTTTTTTATTTTTTATTTTGCTTTACCTTTTCAATTATTCAGGAACTTCATTGTTATTCCTTGTCCATATTTTCACTTTCTCAAACTATCTCAGGTACAATAGCATGTGAGTATCTAGTGAACTAACTGAAAATTTCCAGTTTCTTGGAAGAGGTTGTCGTATGATTATTATAGTATCTTGGCCTGGAATTAGTTATTTCTTTTTTCTTGGCCACAATGACAAGGTCATATGTCAAGGATGTTTGAGATCATTGTGGATGTAAACATTTTTTTGGGATACGTAAGAATTGAAGTTTGCCTCTGACAAGTCCTTATGGTAGGGTTATCCTCCTTTTCTTGGGATGCCGCATGCTAGAATGGCTTTACCTCTTGAGGTGACACAGGAACCTGTTTTTGTGAATGCCAAACAATATCAAGGGATCCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAATTAGAAAGGTATGACTGCTATTCAAATAATCGTGTTTCATGTACTACAGCTTGTCTATTATACATGTTTAAGTAGCTGGGAATCTAACAACGCCTTTTTAATTGTATTTTACTCTTAATGAAGTTCATTCTTTCCTATGCTGTAAATTTGATTTGGTACTTACAAAATTCTTTACCGAGTACTTTTTCATCTGTTTAATTACCATAAACATGACATGTGAGTGAAGGGAAACTAAAAAGTTATTTAGTTGTGCTGGACAGTGCAGTGGATGTACTCGCATTCGCTTTTTAAAATAGGTATAAGGTTATTTCCAACACCCATATGAATTACCAGGTCGTATCAAGACCTTACAAGACTGATAAAAAGATTTAAAGGAAAGATGTAATGTTGCATTGTGATTATTGTTTTGCAAGACCAGAGCATGTCAACTGAAGGTAAAGGTATAATAAACTGTCTCCCAGGGATCAAGACATTTAAGTTTTTAATTCGACTTCTGAGCCTTCATTTACATTTCACGTTGGGTGTTGAGCTGACCAGAGATGGTGGACTCACTAGTTCAGGTTGAGTTATACTGAGTCAAAGCTGGTCGTTCATGATTTCATGATTTCTTGTTGCTGTATGGCTTATAATAGATAATTCGTTGTCCTTTGAGACAAATATGGCTTGGCTGACTCAGACTCATTTCTGAGTATTGTTCTATGTGTGTGTGCTCGCATGAGCCACGGTCCGATTAGAAACATCAGATGTGATTGAGAGTTGGACGGGTCATTTGGCTGGTTGGTGGTTCTGTATGTTCGAAGAGTGATGATTGTTCACTCTCCGTTTTCTTTTTCTTCTTTCCTGTTTGAACAATTCTTTTAGTATAGCCTATATGCAGGTTTGTATGTTTCTGAAGTTCCTCCAATATTTAGCTTGTGTTTTATGCTACACAGCCGTATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGTTAATTCTTCGAGTTCTACTATGAAGAACAAGGACTCCGGTTCTGGTCAAGCTTTCTCGTCGCACTCTGCTGGTTCATCGGGTTCTGAAGCTGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCGAGGACGCAGTTGCATGAGGCGTACAAAGCTCGAAGTTATGTGAATGGCAGTGAACAATTTCATAATTACAGTAGCTTCCAAGCTTCCTCATATGCTTTACGGTCTGGTGAGAGAGGTGATGATGGAGACTGTTCAGGACAGCAACGAGGAAGCATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCGAAAATATGGGGTGCCCCTAGGCTATCTACGGGCTACATTCCCTGGCAGTTTTCTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTGCTTGATCGTAAAGGAGACGGGATGATATAAGTTGGCCATTTGAGCCCTTGTTCTGGTTCAGTCCTTGGATGCTTTATTCCAACCTCTCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACAGTTTTCCTTTTTAATTAACAAACACCTTGCTAGATCGAATGCATAACTGTTATGTACTTGTGAGTGTGTCAAGGCTTGAACTTTGATCCACGATTTGGTTGCAAATTTATGTCCAAGTTTTCCCGGTTTCAAATATGTTTCTTTGCTATTATATGAATCCGGATTTCAGCACCC

mRNA sequence

TCAGACCCTCACCACCCACGTCAACTGGGAACCTGCTTTAGCCGGTTCACTCGGCTCACAGGCATCCACTTAGATAGCCTAGTTCGAAACTGGAAGAGGAGGTCGCCGGTGGAAGACCAGCTGGAACTGAAGTCGGGTCCCGCAGTGGGTAAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCACAAGGGCCTTCGCTTTGGCACTGTAGTTACAGTGCTCTCTCTTAAGTATGAGAATCGTTGAAGAACTGGATTGAGTCTTCGATTTCTCTTTCTGTTTCTCTCTTTTCCGAGATTCCGAGTGGTTGCGTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCCTCCAAATATGCAGTCAAAGCCTAGAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGATACAATCAGATTTCCCCGCCAGCAGCAGGAGGAAATTTGTCCAATTCAACATCACTGGAATGTCCTAATGGTGCCTCAGAATCTAATGACGGACCATCAATGTCAAATGATGATTTGAATGAAGATGATGATGATGACACCACAAAAGATTCACACGCTGTAAGTTATGGGCAAGTACAGAACAACAGTCAGCATGCTGTTTCTGCTGCACCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCTATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCGCATGCTAGAATGGCTTTACCTCTTGAGGTGACACAGGAACCTGTTTTTGTGAATGCCAAACAATATCAAGGGATCCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAATTAGAAAGCCGTATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGTTAATTCTTCGAGTTCTACTATGAAGAACAAGGACTCCGGTTCTGGTCAAGCTTTCTCGTCGCACTCTGCTGGTTCATCGGGTTCTGAAGCTGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCGAGGACGCAGTTGCATGAGGCGTACAAAGCTCGAAGTTATGTGAATGGCAGTGAACAATTTCATAATTACAGTAGCTTCCAAGCTTCCTCATATGCTTTACGGTCTGGTGAGAGAGGTGATGATGGAGACTGTTCAGGACAGCAACGAGGAAGCATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCGAAAATATGGGGTGCCCCTAGGCTATCTACGGGCTACATTCCCTGGCAGTTTTCTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTGCTTGATCGTAAAGGAGACGGGATGATATAAGTTGGCCATTTGAGCCCTTGTTCTGGTTCAGTCCTTGGATGCTTTATTCCAACCTCTCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACAGTTTTCCTTTTTAATTAACAAACACCTTGCTAGATCGAATGCATAACTGTTATGTACTTGTGAGTGTGTCAAGGCTTGAACTTTGATCCACGATTTGGTTGCAAATTTATGTCCAAGTTTTCCCGGTTTCAAATATGTTTCTTTGCTATTATATGAATCCGGATTTCAGCACCC

Coding sequence (CDS)

ATGCAGTCAAAGCCTAGAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGATACAATCAGATTTCCCCGCCAGCAGCAGGAGGAAATTTGTCCAATTCAACATCACTGGAATGTCCTAATGGTGCCTCAGAATCTAATGACGGACCATCAATGTCAAATGATGATTTGAATGAAGATGATGATGATGACACCACAAAAGATTCACACGCTGTAAGTTATGGGCAAGTACAGAACAACAGTCAGCATGCTGTTTCTGCTGCACCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCTATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCGCATGCTAGAATGGCTTTACCTCTTGAGGTGACACAGGAACCTGTTTTTGTGAATGCCAAACAATATCAAGGGATCCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAATTAGAAAGCCGTATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGTTAATTCTTCGAGTTCTACTATGAAGAACAAGGACTCCGGTTCTGGTCAAGCTTTCTCGTCGCACTCTGCTGGTTCATCGGGTTCTGAAGCTGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCGAGGACGCAGTTGCATGAGGCGTACAAAGCTCGAAGTTATGTGAATGGCAGTGAACAATTTCATAATTACAGTAGCTTCCAAGCTTCCTCATATGCTTTACGGTCTGGTGAGAGAGGTGATGATGGAGACTGTTCAGGACAGCAACGAGGAAGCATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK

Homology

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BLAST of CmoCh20G000920 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.7e-55
Identity = 143/278 (51.44%), Postives = 176/278 (63.31%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSH-AVSYGQVQNNSQHAVSAAPTV---HGGCITQPP 120
           ESND  S S D     ++D T KDS  A S   V N+       A ++   H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

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BLAST of CmoCh20G000920 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-47
Identity = 147/339 (43.36%), Postives = 181/339 (53.39%), Query Frame = 0


Query: 9   NQLESEPPNMQQTSSYS-EPWWR-SIGYNQISPPAAGGNLSNSTSLECPNGASESNDGPS 68
           N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN   S
Sbjct: 15  NKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL-----ALESNGSKS 74

Query: 69  MSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGHSIAC 128
            SN D   + +   T      S G   + +Q       ++H G    PP  +LVGH++  
Sbjct: 75  PSNRDNTVNKESQVTTSPQ--SAGDYSDKNQE------SLHHGITQPPPHPQLVGHTVGW 134

Query: 129 A-SNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 188
           A SN YQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRR
Sbjct: 135 ASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRR 194

Query: 189 RQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDSGS 248
           RQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  K ++  +
Sbjct: 195 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEASKRKAEEKSN 254

Query: 249 GQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYSSF 308
           G    S S+ +S          E WN      +       AYK R               
Sbjct: 255 GHVTQSPSSSNSDQ-------GEAWNGDYRTPQGDEMQSSAYKRR--------------- 303

Query: 309 QASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
                        ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 315 -------------EEGECSGQQWNSLSSNHPSQARLAIK 303

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BLAST of CmoCh20G000920 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 63/140 (45.00%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 122 HSIACASNLYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 181
           +S+A     Y DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 182 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRF---AKKNEVNSSSST 241
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF    K++E +  SS 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 242 MKNKDSGSGQAFSSHSAGSS 257
            +  +  +G++  + S+G+S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

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BLAST of CmoCh20G000920 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.3e-20
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 131 YQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRR 190
           Y DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRR
Sbjct: 55  YPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRR 114

Query: 191 QARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRF--AKKNEVNSSSSTMKNKDSG 250
           Q+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF  AKK   +         D  
Sbjct: 115 QSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDEN 174

[Close]

BLAST of CmoCh20G000920 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 4.2e-19
Identity = 76/196 (38.78%), Postives = 104/196 (53.06%), Query Frame = 0


Query: 60  ESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQV----QNNSQHAVSAAP------TVHGG 119
           +S  G   +   ++  D D ++  S   SY +V     +N    +S +       T   G
Sbjct: 49  DSRPGHIQTTKQISFQDQDSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKG 108

Query: 120 CITQPPQLELVG----HSIACASNL---YQDPYYAGVMAA-YGHQPG--YPPFLGMPHAR 179
             + P Q  + G    H     +N    Y DP+Y G++AA Y  Q     P  + M   R
Sbjct: 109 FASNPKQGSMTGFPNIHFAPAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGR 168

Query: 180 MALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRAR 235
           + LP E+T+ +PVFVNAKQY  I+RRRQ RAK E +NKLI+ RKPYLHESRH HA++R R
Sbjct: 169 VPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPR 228

[Close]

BLAST of CmoCh20G000920 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.0e-185
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CmoCh20G000920 vs. ExPASy TrEMBL
Match: A0A6J1FW74 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.1e-184
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 3   SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 62
           SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN
Sbjct: 21  SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 80

Query: 63  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 122
           DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH
Sbjct: 81  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 140

Query: 123 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 182
           SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL
Sbjct: 141 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 200

Query: 183 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 242
           RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS
Sbjct: 201 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 260

Query: 243 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 302
           GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS
Sbjct: 261 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 320

Query: 303 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 321 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of CmoCh20G000920 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 6.9e-182
Identity = 337/343 (98.25%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN IS PAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNN QHAVSAAPTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSYVNGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CmoCh20G000920 vs. ExPASy TrEMBL
Match: A0A6J1FYI1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.5e-180
Identity = 336/341 (98.53%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 3   SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 62
           SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN
Sbjct: 21  SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 80

Query: 63  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 122
           DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLEL   
Sbjct: 81  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLEL--- 140

Query: 123 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 182
             ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL
Sbjct: 141 --ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 200

Query: 183 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 242
           RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS
Sbjct: 201 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 260

Query: 243 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 302
           GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS
Sbjct: 261 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 320

Query: 303 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 321 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 356

[Close]

BLAST of CmoCh20G000920 vs. ExPASy TrEMBL
Match: A0A6J1JES9 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.7e-177
Identity = 332/343 (96.79%), Postives = 334/343 (97.38%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN IS PAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNN QHAVSAAPTVHGGCITQPPQLEL 
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLEL- 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
               ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 ----ACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSYVNGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 338

[Close]

BLAST of CmoCh20G000920 vs. NCBI nr
Match: XP_022944166.1 (nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] >XP_022944167.1 nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 659.1 bits (1699), Expect = 2.1e-185
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CmoCh20G000920 vs. NCBI nr
Match: XP_022944164.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 3   SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 62
           SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN
Sbjct: 21  SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 80

Query: 63  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 122
           DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH
Sbjct: 81  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 140

Query: 123 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 182
           SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL
Sbjct: 141 SIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL 200

Query: 183 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 242
           RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS
Sbjct: 201 RRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDS 260

Query: 243 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 302
           GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS
Sbjct: 261 GSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYS 320

Query: 303 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 321 SFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of CmoCh20G000920 vs. NCBI nr
Match: KAG7010273.1 (Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 652.9 bits (1683), Expect = 1.5e-183
Identity = 340/343 (99.13%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN ISPPAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSYVNGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CmoCh20G000920 vs. NCBI nr
Match: KAG6570399.1 (Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 338/343 (98.54%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN IS PAAGGNLSNSTSLECPNGASE
Sbjct: 76  MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 135

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDS AVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV
Sbjct: 136 SNDGPSMSNDDLNEDDDDDTTKDSRAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 195

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 196 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 255

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK
Sbjct: 256 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 315

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSYVNGS QFHN
Sbjct: 316 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 375

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 376 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 418

[Close]

BLAST of CmoCh20G000920 vs. NCBI nr
Match: XP_022986703.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >XP_022986704.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181
Identity = 337/343 (98.25%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60
           MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYN IS PAAGGNLSNSTSLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120
           SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNN QHAVSAAPTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240
           ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KNK
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300
           DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSYVNGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
           YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CmoCh20G000920 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 219.2 bits (557), Expect = 5.3e-57
Identity = 141/277 (50.90%), Postives = 176/277 (63.54%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTV---HGGCITQPPQ 120
           ESND  S S D     ++D T KDS A +  +  N+       A ++   H   + QPP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA--- 240

Query: 241 TMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
               +D+G        +  SSGSE       ET NSS
Sbjct: 241 ---GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of CmoCh20G000920 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 219.2 bits (557), Expect = 5.3e-57
Identity = 141/277 (50.90%), Postives = 176/277 (63.54%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTV---HGGCITQPPQ 120
           ESND  S S D     ++D T KDS A +  +  N+       A ++   H   + QPP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA--- 240

Query: 241 TMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
               +D+G        +  SSGSE       ET NSS
Sbjct: 241 ---GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of CmoCh20G000920 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-56
Identity = 143/278 (51.44%), Postives = 176/278 (63.31%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSH-AVSYGQVQNNSQHAVSAAPTV---HGGCITQPP 120
           ESND  S S D     ++D T KDS  A S   V N+       A ++   H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of CmoCh20G000920 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-56
Identity = 143/278 (51.44%), Postives = 176/278 (63.31%), Query Frame = 0


Query: 1   MQSKPRSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGAS 60
           MQSKP   N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGPSMSNDDLNEDDDDDTTKDSH-AVSYGQVQNNSQHAVSAAPTV---HGGCITQPP 120
           ESND  S S D     ++D T KDS  A S   V N+       A ++   H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  N YQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSS 273
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of CmoCh20G000920 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-48
Identity = 147/339 (43.36%), Postives = 181/339 (53.39%), Query Frame = 0


Query: 9   NQLESEPPNMQQTSSYS-EPWWR-SIGYNQISPPAAGGNLSNSTSLECPNGASESNDGPS 68
           N+++SE      +S  S  PW R +   N  S   AG   S S +L     A ESN   S
Sbjct: 15  NKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL-----ALESNGSKS 74

Query: 69  MSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGHSIAC 128
            SN D   + +   T      S G   + +Q       ++H G    PP  +LVGH++  
Sbjct: 75  PSNRDNTVNKESQVTTSPQ--SAGDYSDKNQE------SLHHGITQPPPHPQLVGHTVGW 134

Query: 129 A-SNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 188
           A SN YQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRR
Sbjct: 135 ASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRR 194

Query: 189 RQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKDSGS 248
           RQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  K ++  +
Sbjct: 195 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEASKRKAEEKSN 254

Query: 249 GQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNYSSF 308
           G    S S+ +S          E WN      +       AYK R               
Sbjct: 255 GHVTQSPSSSNSDQ-------GEAWNGDYRTPQGDEMQSSAYKRR--------------- 303

Query: 309 QASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 344
                        ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 315 -------------EEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of CmoCh20G000920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	3.7e-55	51.44	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	4.8e-47	43.36	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.7e-20	45.00	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	2.3e-20	48.82	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	4.2e-19	38.78	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CmoCh20G000920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTP1	1.0e-185	100.00	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1FW74	1.1e-184	100.00	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JHB5	6.9e-182	98.25	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FYI1	8.5e-180	98.53	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JES9	6.7e-177	96.79	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]

BLAST of CmoCh20G000920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944166.1	2.1e-185	100.00	nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] ...	[more]
XP_022944164.1	2.4e-184	100.00	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]	[more]
KAG7010273.1	1.5e-183	99.13	Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570399.1	1.1e-181	98.54	Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subs...	[more]
XP_022986703.1	1.4e-181	98.25	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >X...	[more]

BLAST of CmoCh20G000920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	5.3e-57	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.4	5.3e-57	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.1	2.6e-56	51.44	nuclear factor Y, subunit A1	[more]
AT5G12840.3	2.6e-56	51.44	nuclear factor Y, subunit A1	[more]
AT3G20910.1	3.4e-48	43.36	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 170..192 score: 74.15 coord: 201..224 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 166..227 e-value: 3.3E-35 score: 132.9
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 169..224 e-value: 4.4E-26 score: 91.2
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 31..334
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 167..227 score: 36.393036
None	No IPR available	GENE3D	6.10.250.2430		coord: 167..229 e-value: 4.0E-30 score: 106.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..259
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 31..334
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 172..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G000920.1	CmoCh20G000920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity