CmoCh20G000890 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G000890
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr20: 454177 .. 456712 (+)
RNA-Seq ExpressionCmoCh20G000890
SyntenyCmoCh20G000890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAGGTTCACGCCTTACATTATGCTCATGGTTTGCTCTGCTAATCCTAAAAGGAAGATATCTACTCGGCTAGCTCCAGGAGAGTATTCCCATGTAACAGAGCCATTACTATCCAAATATCCTTTAACTGTTAGTACTTGTAAGCACATTTACTTTATCTTACAAAGATTCTGTTTTTTCAGGAATCCAGTCAACTGAAATTAGTTTCCCTTTGTGAGAGAATTGTTGGCGCAGATCGATATTCTCTGATCTTTCCCGAGGTGTCTTACAAGAGCACCTGGTAGTGCATAAGGGCTGTACACTGTGGACTGTTCTTGCTGCATTCTTCGTTGCAATCTCCAACTGTCTGATTTAGTCACTTGCCTGGTTCCACCAACAACAAGATCTAGATTCCTCCAAGAACCGAACCGGTATGTATACTTTGTTTTCTTCGTCTCATTATCCTACCTTATTTATGGGCGTGTTGGTTTATCGTGTATAAACTAGCCATTCTACTTGCTGGTACAAATTATGATCTGATATATGACCGTCCATGTGAAATATGTATTCCTTAAGTTATTTCACTGAAAGAGTTCTAAATCAACAACCATGAACCAACACCCTTTACTAAAGATTACCACCTTTAACACCTTAACGATGGTGTTGGATCCACAAAATTTCTCTTGAAGATAGTCAATGTAATGGCTGCATAATTTTGCTTTAGAAATTGAGAAAAGACTGTCTTTCAAATGGAAGGGTGTTGACATGGAACATGAACTTTTTTACAGTATATGCCTAAACTTGTTGAGTTATCTGTGAGTGGCGCAAAATGTGAAACCTTGTAAGTTATAGAAACATATTCAATAAGATCGATACTTTTAACATGTATAAGATGTTGAAAGTATTTACAGTGACAATCTATTAAACATTGGATATAAGAATTCTTATTAGTTGGTGAAAAATAATATGAATGAGAATTGACTACTAAGGACATGGCCAGATTGGTCGAGGTTAACTAAAGGAAAAGAAATTAGGAAAAAGAAATAATCTAGTAGCTCCTAGTCAGCCAATCTTCTAAAAGCTCTTGTCGTCTGAAGGCCATATTACAGTCTCCATTAGTCGCTCTCGCATCAACTCCAAGTTTTCGTCTGATATCTCTTTGTATATTTCAGCGTGATCACATTTCTATGCAATAACACCAAATCACAATGAATATGTGTTCTTATAATGGCTCCAACAAAGAAATTGTCTTCAAAATACTAAATTTGCTCTTACCTTGACCCATTTGTTATAGAGATGAAGCCTTGTTATCATCACTCTCTCAGCCAAATCCTGTTTCTCCTGTTAATCAAACACATACACATCAAATATCTTATTGTTCAATACTCAATTATTTCATATCCTTGAAGATATGATGTGTTAATCAAGTGAGCTAGGTTCAAGTTGGATGTACAAAAAACTAGAGATTTCTTTACTTCTACCTTTACAAGGGTTCGGATGAAACGCTTCCCATCCCTGGGCTTGTGATTTACAACAAAGCTGTTGATGTAGAAAAAATGAAATTCAAGATTAGGTTGGGAAATAGAATATGTTCTGAACACTGTTGAGGATAATCTAAGCATTTATATTGGCAGTGTTGATGAATTAAGTTCGTAAAAACTCAAGCGAAAGGCTTCACTTACTCATAAAACCATCTGTATTGGGTAGGGTTCATCTCATAAAGCTGATTTAGAACTGTCTTCACAGCTTTGTATGTGAAATAGTTAAGTATTTGCTGCAAGTAGAAAGCCCCTGTTAAGCTTATAATAATGTTACTCTACCGAAGAAACAGAGGAGAAGAAAGAACGATCATAAAATTTGAGCTAGAGAAAGAAGAAGACATCATAGGAAGCTGAATCAAGTAAGCTGTCTTGTCTCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCTAAATGCAGAATGCAAGTTCCAAGAACACTCAACATTAAGGAAACAGAAGAGAACTGGAATTCATAAGATGAAGAAATTTTGCATTGAAGAAGAGAGTCATATCATGTCCATACCATTTTCACATCATCAAAACTCTCCTCGTACTGCCCTGCAAATTCATTGACAACAACAAGCCTCCGATTCCTCCGTTGGTTCCTCCGACGCCGGTGGCCACCACTGGCCGAGAGCTGCCACTCGCTGCCGGAGTTGACAAACGAACTTCTCAAATCCACCAACCGAGACACGGCCAAATGACTCTTAGCCTTAGATCTCCTAGGCAAAACCAAATCCCCACGACTTCTGAGACTCATATTGGTAACCGGCGATGA

mRNA sequence

ATGTCGAGGTTCACGCCTTACATTATGCTCATGGTTTGCTCTGCTAATCCTAAAAGGAAGATATCTACTCGGCTAGCTCCAGGAGAGTATTCCCATGAATCCAGTCAACTGAAATTAGTTTCCCTTTGTGAGAGAATTGTTGGCGCAGATCGATATTCTCTGATCTTTCCCGAGAAGAGAGTCATATCATGTCCATACCATTTTCACATCATCAAAACTCTCCTCGTACTGCCCTGCAAATTCATTGACAACAACAAGCCTCCGATTCCTCCGTTGGTTCCTCCGACGCCGGTGGCCACCACTGGCCGAGAGCTGCCACTCGCTGCCGGAGTTGACAAACGAACTTCTCAAATCCACCAACCGAGACACGGCCAAATGACTCTTAGCCTTAGATCTCCTAGGCAAAACCAAATCCCCACGACTTCTGAGACTCATATTGGTAACCGGCGATGA

Coding sequence (CDS)

ATGTCGAGGTTCACGCCTTACATTATGCTCATGGTTTGCTCTGCTAATCCTAAAAGGAAGATATCTACTCGGCTAGCTCCAGGAGAGTATTCCCATGAATCCAGTCAACTGAAATTAGTTTCCCTTTGTGAGAGAATTGTTGGCGCAGATCGATATTCTCTGATCTTTCCCGAGAAGAGAGTCATATCATGTCCATACCATTTTCACATCATCAAAACTCTCCTCGTACTGCCCTGCAAATTCATTGACAACAACAAGCCTCCGATTCCTCCGTTGGTTCCTCCGACGCCGGTGGCCACCACTGGCCGAGAGCTGCCACTCGCTGCCGGAGTTGACAAACGAACTTCTCAAATCCACCAACCGAGACACGGCCAAATGACTCTTAGCCTTAGATCTCCTAGGCAAAACCAAATCCCCACGACTTCTGAGACTCATATTGGTAACCGGCGATGA

Protein sequence

MSRFTPYIMLMVCSANPKRKISTRLAPGEYSHESSQLKLVSLCERIVGADRYSLIFPEKRVISCPYHFHIIKTLLVLPCKFIDNNKPPIPPLVPPTPVATTGRELPLAAGVDKRTSQIHQPRHGQMTLSLRSPRQNQIPTTSETHIGNRR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G000890.1CmoCh20G000890.1mRNA