CmoCh20G000650 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G000650
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionLipoxygenase
LocationCmo_Chr20: 358025 .. 364533 (+)
RNA-Seq ExpressionCmoCh20G000650
SyntenyCmoCh20G000650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACGTACCTCGTGGTCTTAAAAGTTGGGCACTCTTTTGCGAAGGATGGTCTCATCTTATGGGACGCCGTGTTGGAATGGATGACCAATTACGAGTGCCACTGTTACGCGGATGAGAGAGCGATGAAGAACGACCCGTATTGGAAGGTCCAGCATGGCGAGGGAGGACTATACGATGCTTCAAGCCTTCCCTTCAAGATCTCACAGGGTTCTATAGATAATATATTATGGGGATGAGGAGCATATAATAATACATAGGGGGAGATTATATTATGGGGATGAGGAGCATACAATAATATATAGGGGAGAAGATGGCACCACAAATATTAAATAGGGCCTTCAAAGCGTTTAAACAGAAAGTGGAGCATTTACACAAAACCAACTTCAAACTATGGGATTACAGGACAGGGAGTTCCATACAGCGTTTCCAGTAAACTTGGGGTTATTGAGCTCACCAACTGATGCCCATCCATGTTGGGATTGCCAAACCCCATGTGCTTCCCCATCACTGGTACGTTTTCTTTTCCTTTTTGAAAAACAAAATTTGTCACAACGTTACTTACCCTACTCTTTTTTTAATTTTAAACATTCTTATCACAACATTAACCTTTTTGAAGTCATCACCAATTTGAAATATTATAAGGTTTAGGGTTTTGTCGTTGTTGTTTTAGCATCCCTAACTCACCTCCGTGTGTTTCACGTGACAACCCATACCCATTCTTCTAATCTGTGTCTCGCGTGAGTACCCTTTAGGTCATTTCCCCCTGTGAATGTTTGCTGAATCACCACACCTCAATGGGGGTGAGAGTTCTCTTATTTATAATTATTTTCAGAATACAGAAATATGGTAAATTACAAATATTATGGAAATAGTAATAAAAGGAAAGAATAATAAATGAATGCAATATATTTGCCTTTAATAAGAGGGCAAATATGGTAACCCGTAATGTAAGGCAAATATCTAGATATTTGCCTTATAGTGACGGTCAACTATCCTTAACACCCCCCCGCAAGCTGAGCGTCGGATTTGAACGAACGTAAAGCTTGGATCTGAAAAATTCAAAGAGAGGTCGAGAAATACTCTTTGTGAAGATGTCAGCAACTTGGAGATGAGAGGGTACATATTGTGTGCGAAGTTTGCCAGCGATAACAAGTTCTCGAAGGAAATGATAATCTAGTTCAACATGTTTGGCCCGCTTGTGAGAAACGGGATTAGAGCTCAAAAAAATAGCACTTTTGTTGTCACATAAGAGTAAGGGCTGCTTTGAAATAGGGACCTTGAGGTCATGCAAAAGATGCGTAACCCAAAGAAGTTCAGCAGCGGTTGTGGCAAGAGCACGATACTCAGATTCACAGCTGGAGCGTGAGACAGTAGGTTGCTTTTTGGCACTCCAAGAAACCAGATTGTTACCAAGATAAATAGAATAGCCGGATGTAGAACGACGAGTATCGGGACAACCAGCCCAGTCAGCATCCGAATAAGCGACTAGCGTACTAGGAACATTGGATGGACGAAAGGTAAGACCAAAGTGGAGTGTTCCTTTGACATAGCGAAGAATACGTTTGACAGCAAGAAAGTGATCTGCAGTAGGGGCATGCAAGAATTGACTGACAGAATTGACAGCATAGGCAATATCTGGACGCGTAATAGTCAAGTACTGAAGGGCGCCAACAAGAGATCTGTAGAGAGTAGGATCAGAGAAAGGAGAACCATCAGCAGTCAAGTGTTGAGAAACAACCATAGGAGTGTGAACTGGTTTGCTATCGAGCAACTGAGCACGAGTAAGAATATCTCGAGCATATTTTAACTGACTAATAAAGAGACCATCAGGAGTGGGTGAAGCTTCAAGACCAAGAAAGTAACTGAGAGAACCCAAATCTTTGGTAGCAAACTCAGAATGAAGCTTGCGAGTAAAGCTGTCAATAAGAGATGAGTTGTTGCCGGTAACAATAATGTCATCAACATAAAGAAGCAAATAGATAATGTTAGATTGCTGATGAAAGACAAAAAGGGACGTGTCAGCGCGACTGCAAGAAAACCCAAGTGTGAGAAGAAATGAGCTAAAACGCTGAAACCAAGCACGAGGAGCTTGCTTTAAACCATAGAGGGCTTTCTTTAATAGACAAACATGAGTGGGAAATCGAGGATCAATATACCCAGGAGGTTGTTCCATATGAACACGTTCAATAAGAGTTCCATTGAGAAAAGCATTCTTGACATCAAGTTGTCGAAGAGGCCATTTATTTGTGACTGCAATAGAAAGCACAACACGGACAGTGGTAGCTTTGACAACCGGACTGAAAGTGTCAGTGTAGTCAAGACCAGGAACCTGAGTATAACCTTTGGCAACAAGACGAGCCTTGAAACGCTCGACAGATCCATCAGGCAAATATTTAATACGAAACACCCATTTAGAGCCCACGATGTTGGTGTTAGCAGGGCGAGGAACCAAAGTCCAAGTATCATTTTGTTGTAATGCTTGAATTTCTTCATCCATGGCAGCCACCCAAGCAGGATTCTTAGCCGCAGATTTGAATCCTTTTGGCTCAGTGGATGCAAGAAGAGCAGAAAGAAGTCCAGATGAGCCCAAAATACCAAGATTTGCTGGATGACGAGTCTTGAATATACCAGCTTTGGCTCGTGTGATCATAGGATGAGTGCCCAAAGAAGAGAAATCAACAGGAGGTTCAATAGAGGTCGAATTAGAAGTCGAAGGTGGCAAAGTGGAACCTGCAAGAGAAGTATCAACCTGCACAGACTCATCTACAAGGTCAGAACAAATATCACACGGGGATGAACTGGATCGAGGAGTTTGCGGTGATGAAGTGGTAGGGGGGGATGAATCAATATGATGAAAATGTGGTTCTAAGAAATTTGAAATAGGAATAGAGGAAAGAGGTTGGGTCTGGGAGCTAGGGATAGCAGGAAAGTGGGTTTCATCAAATTGAGCATGACAGGTGATATATAGCTTAGTGGTGGCCGGATCAAGACAGCGAAACCCTTTATGAGCAGGACTATAACCCAAAAAAATACAAGGAATGCTGCGGGGAGAAAGCTTGTTAGGCATATAATCACGCAAATAAGGATAAACACGACAACCAAAGGGATGAAAATTGTCATAATGTGGAGTGTAGCCATAAAGGAGTTCAAAGGGTGACTTACCTCCAAGAAGTGGAGTAGGCAACCGGTTGATAATATAAGCTGCAGTGCTGAAGGCGTCAACCCAAAAACGAGAAGAAAGATGAGAGTGAAAGAGAAGGGCCAAGCCAGTCTCAGTCACATGACGATGTTTTCTCTCAGCACGACCATTTTGAGCAGGTGTATATGGACAAGAGAGTTGATGGTGGATGCCAGAATTACGTAAATGAGTTTTGAAACAAGTATTAGTAAATTCGGTACCACCATCACTTTGAAATACCTTGATACGAGAAGAATATTGATTTTCCACAAATTTTTGAAATTGAAGAAAAATATCAAAAAAATCAGATTTAAATTTTAAAGGGTAAAACCAAGTGAATCGAGAATAATCATCAATAAAAATAACATAATAAAGGAAACCCGAATTTGATTTGACGGGAGAAGGACCCCAAAGATCACAATGAATAAGATCTAACACATGAGACGACCTACGTTCATTGCGGGAATAAGGCAATCGATGACTTTTTGCAAGCTGACAGGTATTACATAATGATGGAGAAGGCAATAAAGACGTAAGAGAAAGATGACCTTTTCTATTTAAAAAAGAAATAACAGAATGATTCACATGACCTAGACGAGCATGCCATAAATCATATGAAGCACGTAAAGATTTGTTTCTAAGGGCTGAAATAAAAGCAGAGTTGCCGCGCTCCAGCACATATAGCCCTCCATCTCTTTTACCGGTTGCCACCACCCTTCCTGTTTGACGATTCTGGATAGTAATAAGATTATTAGTAAATGTAACGGAGAGAGGAAAATCAGACGTTAATTTACTTATGGAAAGAAGATTTTTAGTGAGGTGAGGGACAACCAAGACATCTAACAAGTGAATATTTGGAACAGGTGAAAGAGTACCGGTGTGGGTAATGGGTAGGGAAGCACCGTTTCCTACAATCACAGAGTCCTTACCCGTGTAATTTTTAGACTGATCCAAAATAGATGGGTCGGCAGTCATATGGGCCGAAGCTCCAGTGTCCAGAAACCAATCAGCAGTATCGGGTCCAGCAATAGAACATGACGTGTTAAAGGCTTCAGCAAGGTGAGCATGAGAAGAATCAGGTCGAACATACCGTTGGTTGCAGCGGTCAGCATAATGGCCCTCTTTGCGGCATATTTGGCAGTGAGGTGGTCGACGACCTTGACTTGAGTGGGTTCGTCCTCGATTAGAAGAGTTATTTTTGTGAGAATAAGAACGACCTCGCTGGTTGGTAAAGGAAGCAGGGTGGCTTCCATGGGTGCGACCACGATTAGTGACTGTGAATGCTGTAGGAGTGGAGTTAGAGGACTCAAGGGAGAGCTGAAACAACTCAAAACTTTCAGCTTTAGAGACTAAATCTGCAAAACAGGGGATAGAGGTAAGAGCCATCTGAGCAGTAGAAAAAGCTGAAAATTCGGTGCCGAGTCCACGAAGGAACCAGTGCACTTTATCAATGTCCTCGACCGGTCTGCCAATGGCATGAAGTTGGTCACAAATTTTTTTGAAGGCACGGGCATACTCAGCAACAGGTTTGGTGCCACGTTTCATCAACTGCAAGTCATCCTTGAGTCTCAGTTCACGAGCTTTCGACTGATGGCTGAACGTAGTTTCCAACGCAAGCCAAACATCACGTGCAGTAGGGAGACCAACGACAACAGCCATGGCTTCCTCAGTGAGAGAGGAGAGCAGGAGACAGAGAAGTCGTTGATCGGCTGCTCTCCATGCCAAATATTTGGGGTTGAGTGTTGAAGAGGTTTCTGGTTCAAAGCGAGGTGGTGGAACCCTGGTTCCATCGACATAGCCCAGCATGTCTTGACTCTCAAGAAGAGGGAGAAGTTGGCTTTTCCAAAGAAGATAATTGGAGGAAGAAAGTTTGATGGTGATCATATGGATTAGAGTATTGAAAGGAAGAAGATGATAAGAAGATTCGGAAGCCATAGAGAAGAAAGGATCAGGGTTGTTAAACCGAAAGGGCTCTGATACCATGTGAATGTTTGCTGAATCACCACACCTCAATGGGGGTGAGAGTTCTCTTATTTATAATTATTTTCAGAATACAGAAATATGGTAAATTACAAATATTATGGAAATAGTAATAAAAGGAAAGAATAATAAATGAATGCAATATATTTGCCTTTAATAAGAGGGCAAATATGGTAACCCGTAATGTAAGGCAAATATCTAGATATTTGCCTTATAGTGACGGTCAACTATCCTTAACACCCCCAACACATGTTACTTCAGATTTAAGGATACACAGGATATTTTATACCTTAGCTGTAGATTTTGTTGTTTAACCAAAATTCCACACGCTTCCTCGTCCCTCACTCACAACCTCCCAAAGCTGAGCACACACTGCAAAGCTGGAGGTTGGAGTTATGTATATATCCATCATCACAACAAGGAAACCAAAAGTAAATTGAATGGAGGCGGTGGGATTGGTATGAAATATCCACAATGGTGTGGTTGCTTTGCACCCCGTCCCCACGACTCCAATAGATATTTCCTTCCAAAATTGACAATTACTTTTCACACGTTTTTTTCGTGCCTTCACTTCTCTTCTCTCTCTCTCTCATTCTAACATTTAACAACGTATCAAATACAAAATACAAACCACAAATCACATCAACTCCATTCATTCCTCTCTCTCTCTCTTACTCCCTTCATAAATTAAATATCCACGAATTGTTTTATAGAATAAAAAACAGCATTGAGCTTGGTATAATATGTTACTTACCAGGTTCATCTCCTTTGTTTCATGGTGTTTTTAAAATCATTTATATATATATATTGATGAGTATATTTCAGAATTTTAGGATGTAATTGCAATTCATCCTAAAAACGGAGGGTATCAATGTAATTTAACCTACTGTTTTATTTCTTGGTGATTGAATTTCGATTATACAGGTGGTACAAAAAAATATCTTGTAAATAGGGACAAAGACGTCCGATAGTGCCCATTCCGGAGAAAAGAAGATATTGCGAAACTCTCGAACAATTATTTTAAGCGTATTCCTTTGATTGGCCGGAATTCAGATATTTATACAAACGTCTTAATACATTTTTGGAAGTTTATAGTATATGTCACAACTTTCACTGCTCCTCTCTACACTTTTTGTTCGTTTTTATTTGGTAAACTTTTTCTTTTTTCTTTTTTTCTTTTTTATAGAAAATTTATAGGAGATATTTTTTTTTTTAAATATTTCGTAACTATTCTATTCATCTCTCATTTATTTAAATGGATTTTTTTTCAATAATATAAATGAGATGTTTATCACTCACATGGTAATTATACAGACAAATAATGTTGATTTGTTAAAGCATGCGTAA

mRNA sequence

ATGAAGACGTACCTCGTGGTCTTAAAAGTTGGGCACTCTTTTGCGAAGGATGGTCTCATCTTATGGGACGCCGTGTTGGAATGGATGACCAATTACGAGTGCCACTGTTACGCGGATGAGAGAGCGATGAAGAACGACCCGTATTGGAAGGTCCAGCATGGCGAGGGAGGACTATACGATGCTTCAAGCCTTCCCTTCAAGATCTCACAGGGGGAGAAGATGGCACCACAAATATTAAATAGGGCCTTCAAAGCGTTTAAACAGAAAGTGGAGCATTTACACAAAACCAACTTCAAACTATGGGATTACAGGACAGGGAGTTCCATACAGCGTTTCCAAATTTTAGGATGTGGTACAAAAAAATATCTTACAAATAATGTTGATTTGTTAAAGCATGCGTAA

Coding sequence (CDS)

ATGAAGACGTACCTCGTGGTCTTAAAAGTTGGGCACTCTTTTGCGAAGGATGGTCTCATCTTATGGGACGCCGTGTTGGAATGGATGACCAATTACGAGTGCCACTGTTACGCGGATGAGAGAGCGATGAAGAACGACCCGTATTGGAAGGTCCAGCATGGCGAGGGAGGACTATACGATGCTTCAAGCCTTCCCTTCAAGATCTCACAGGGGGAGAAGATGGCACCACAAATATTAAATAGGGCCTTCAAAGCGTTTAAACAGAAAGTGGAGCATTTACACAAAACCAACTTCAAACTATGGGATTACAGGACAGGGAGTTCCATACAGCGTTTCCAAATTTTAGGATGTGGTACAAAAAAATATCTTACAAATAATGTTGATTTGTTAAAGCATGCGTAA

Protein sequence

MKTYLVVLKVGHSFAKDGLILWDAVLEWMTNYECHCYADERAMKNDPYWKVQHGEGGLYDASSLPFKISQGEKMAPQILNRAFKAFKQKVEHLHKTNFKLWDYRTGSSIQRFQILGCGTKKYLTNNVDLLKHA
Homology
[Close]
BLAST of CmoCh20G000650 vs. ExPASy Swiss-Prot
Match: P38418 (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.9e-05
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND 47
           + FA DGLILWDA+ EW+T+Y  H Y DE  + +D
Sbjct: 664 YPFANDGLILWDAIKEWVTDYVKHYYPDEELITSD 698

[Close]
BLAST of CmoCh20G000650 vs. ExPASy TrEMBL
Match: A0A6J1J654 (Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111483812 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND----PYWK 51
           + FA DGL+LWDAVLEWMT Y  H Y DE+A+KND     +WK
Sbjct: 605 YPFANDGLMLWDAVLEWMTEYVHHYYPDEKAIKNDKELKAWWK 647

[Close]
BLAST of CmoCh20G000650 vs. ExPASy TrEMBL
Match: A0A6J1FUE7 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111448228 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND----PYWK 51
           + FA DGL+LWDA+LEWMT Y  H Y DE+A+KND     +WK
Sbjct: 609 YPFANDGLMLWDALLEWMTEYVHHYYPDEKAIKNDKELKAWWK 651

[Close]
BLAST of CmoCh20G000650 vs. ExPASy TrEMBL
Match: A0A5A7TDJ5 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00150 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND 47
           + FA DGLILW+A++EWMT Y  H Y D++A+KND
Sbjct: 667 YPFANDGLILWEALVEWMTEYVNHYYPDDKAIKND 701

[Close]
BLAST of CmoCh20G000650 vs. ExPASy TrEMBL
Match: A0A5A7TEK5 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00130 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND 47
           + FA DGLILW+A++EWMT Y  H Y D++A+KND
Sbjct: 668 YPFANDGLILWEALVEWMTEYVNHYYPDDKAIKND 702

[Close]
BLAST of CmoCh20G000650 vs. ExPASy TrEMBL
Match: A0A5D3DE91 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00110 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND 47
           + FA DGLILW+A++EWMT Y  H Y D++A+KND
Sbjct: 668 YPFANDGLILWEALVEWMTEYVNHYYPDDKAIKND 702

[Close]
BLAST of CmoCh20G000650 vs. NCBI nr
Match: KAG6570373.1 (hypothetical protein SDJN03_29288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MKTYLVVLKVGHSFAKDGLILWDAVLEWMTNYECHCYADERAMKNDPYWKVQHGEGGLYD 60
          MKTYLVVLKVGHSFAKDGLILWDAVLEWMTNYECHCYADERAMKNDPYWKVQHGEGGLYD
Sbjct: 1  MKTYLVVLKVGHSFAKDGLILWDAVLEWMTNYECHCYADERAMKNDPYWKVQHGEGGLYD 60

Query: 61 ASSLPFKISQGE 73
          ASSLPFKISQG+
Sbjct: 61 ASSLPFKISQGQ 72

[Close]
BLAST of CmoCh20G000650 vs. NCBI nr
Match: XP_022985897.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-05
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND----PYWK 51
           + FA DGL+LWDAVLEWMT Y  H Y DE+A+KND     +WK
Sbjct: 605 YPFANDGLMLWDAVLEWMTEYVHHYYPDEKAIKNDKELKAWWK 647

[Close]
BLAST of CmoCh20G000650 vs. NCBI nr
Match: KAG7010251.1 (Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-05
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND----PYWK 51
           + FA DGL+LWDA+LEWMT Y  H Y DE+A+KND     +WK
Sbjct: 112 YPFANDGLMLWDALLEWMTEYVHHYYPDEKAIKNDKELKAWWK 154

[Close]
BLAST of CmoCh20G000650 vs. NCBI nr
Match: XP_023513406.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-05
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND----PYWK 51
           + FA DGL+LWDA+LEWMT Y  H Y DE+A+KND     +WK
Sbjct: 609 YPFANDGLMLWDALLEWMTEYVHHYYPDEKAIKNDKELKAWWK 651

[Close]
BLAST of CmoCh20G000650 vs. NCBI nr
Match: XP_022943469.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-05
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND----PYWK 51
           + FA DGL+LWDA+LEWMT Y  H Y DE+A+KND     +WK
Sbjct: 609 YPFANDGLMLWDALLEWMTEYVHHYYPDEKAIKNDKELKAWWK 651

[Close]
BLAST of CmoCh20G000650 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 12  HSFAKDGLILWDAVLEWMTNYECHCYADERAMKND 47
           + FA DGLILWDA+ EW+T+Y  H Y DE  + +D
Sbjct: 664 YPFANDGLILWDAIKEWVTDYVKHYYPDEELITSD 698

The following BLAST results are available for this feature:
BLAST of CmoCh20G000650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P384183.9e-0554.29Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1[more]
BLAST of CmoCh20G000650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J6541.1e-0560.47Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111483812 PE=3 SV=1[more]
A0A6J1FUE72.4e-0558.14Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111448228 PE=3 SV=1[more]
A0A5A7TDJ52.6e-0460.00Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00150 P... [more]
A0A5A7TEK52.6e-0460.00Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00130 P... [more]
A0A5D3DE912.6e-0460.00Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00110 P... [more]
BLAST of CmoCh20G000650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570373.11.6e-3598.61hypothetical protein SDJN03_29288, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022985897.12.2e-0560.47linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita maxima][more]
KAG7010251.14.9e-0558.14Linoleate 13S-lipoxygenase 2-1, chloroplastic, partial [Cucurbita argyrosperma s... [more]
XP_023513406.14.9e-0558.14linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022943469.14.9e-0558.14linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X1 [Cucurbita moschat... [more]
BLAST of CmoCh20G000650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G45140.12.8e-0654.29lipoxygenase 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILY48484Lipoxigenasecoord: 12..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G000650.1CmoCh20G000650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0031408 oxylipin biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen