CmoCh20G000600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G000600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GATA transcription factor 29-like
Location	Cmo_Chr20: 336166 .. 337471 (+)
RNA-Seq Expression	CmoCh20G000600
Synteny	CmoCh20G000600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTCACATATGGCGTCCGATGTCTCAAATGAAAACCCAAGAATATGATCATCCTCGGTTTCACTCAGAAAGTCAGGTCGATTTGACACTCCGACTTGGCTTCCCCAATGGCAATGACAACGGCAACGCCAATGCCAACGCCAATGCCAACGCCAATGCCAATGCCAATGCCAATGCCAATGCCGGTGAACGTCCTGATATTGATCATTCTAAACCATTTTTCTCCGCTCCTCTTCACAGTATCAACCATCATGCGCTTCAACCTCACCAGGTTTGCTTCTCTCCTGCCTTATTTTCAAAACAAACCCCAATCTCTTTTGCTTAATTGGATCAAATATCAGCTTTTGCAGATCTCAATCAAAATTTCAAACAACTTTTTCAAAACTGATTATTGTGCTGTCTCTGCCTAATCTTGATTAGGGGTTTTTCAATTGAGGCGTGATTTGACTAAATTTAATAATCACTAGTGTGTACACGATCTTAATATTAACTAGCCTTCCATCCTAGTGCTTCCAGATTTTTTTCTTCTTTCCATTTTAGAGTTAGGAATTTGAAGCTTTAATGTCAATGTGATATACATATACATATATGATGATTAAGGATGTATAGTTCTGATATGGAAATGCGTGGAAATTCAAATCGGATGTATCACTGATTAATCCAATGATATTAAACCAAAACTCAAACAGGTGATGGTGAACAATAATCATGGGTTGGCGTCTTCCGGTGGCAGAAGTGGTGAGATGATGAGTGAGGCGAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAACCTATGTTCTCAAGTCAAACAACTTTGGGCAGCTTCATCCAAGTTTATACTGCAACACTTATCCAGCGAAGACCATTGGCAGCACTGCAAATGGCATGCCCAATCTTCCTCTTCAAAATTACAATAATGACCAGTACACACTCCTCAACCCTGCTTGTAGAAAAACAGATGATCATGAAGCGGAAGCTTCCTCCGGGGGCGGCCGGCGGAGAGGTTTGCAACGGCGCCGAGTTTCTGCCTGCAACGAGGTCGAGAGGAGGTGCACCAACTACAATTGCAACACCAATTTCACGCCCATGTGGCGTAAAGGCCCTCTTGGTCCTAAGGTACGAGATTAATTAAGATGTTAAAATAGAAAGTAGTGAATTGAGAAGCATAATGGTTGTAATATAGTGGATGGTGGATTAATATTTCAGAGCCTTTGCAACGCCTGCGGCATAAGGTATAGAAAGGAAATAATGAATAAGGAAGCAATGGCAGCAGAGAACAACCACGGGTAG

mRNA sequence

ATGGAGCCTCACATATGGCGTCCGATGTCTCAAATGAAAACCCAAGAATATGATCATCCTCGGTTTCACTCAGAAAGTCAGGTCGATTTGACACTCCGACTTGGCTTCCCCAATGGCAATGACAACGGCAACGCCAATGCCAACGCCAATGCCAACGCCAATGCCAATGCCAATGCCAATGCCAATGCCGGTGAACGTCCTGATATTGATCATTCTAAACCATTTTTCTCCGCTCCTCTTCACAGTATCAACCATCATGCGCTTCAACCTCACCAGGTGATGGTGAACAATAATCATGGGTTGGCGTCTTCCGGTGGCAGAAGTGGTGAGATGATGAGTGAGGCGAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAACCTATGTTCTCAAGTCAAACAACTTTGGGCAGCTTCATCCAAGTTTATACTGCAACACTTATCCAGCGAAGACCATTGGCAGCACTGCAAATGGCATGCCCAATCTTCCTCTTCAAAATTACAATAATGACCAGTACACACTCCTCAACCCTGCTTGTAGAAAAACAGATGATCATGAAGCGGAAGCTTCCTCCGGGGGCGGCCGGCGGAGAGGTTTGCAACGGCGCCGAGTTTCTGCCTGCAACGAGGTCGAGAGGAGGTGCACCAACTACAATTGCAACACCAATTTCACGCCCATGTGGCGTAAAGGCCCTCTTGGTCCTAAGAGCCTTTGCAACGCCTGCGGCATAAGGTATAGAAAGGAAATAATGAATAAGGAAGCAATGGCAGCAGAGAACAACCACGGGTAG

Coding sequence (CDS)

ATGGAGCCTCACATATGGCGTCCGATGTCTCAAATGAAAACCCAAGAATATGATCATCCTCGGTTTCACTCAGAAAGTCAGGTCGATTTGACACTCCGACTTGGCTTCCCCAATGGCAATGACAACGGCAACGCCAATGCCAACGCCAATGCCAACGCCAATGCCAATGCCAATGCCAATGCCAATGCCGGTGAACGTCCTGATATTGATCATTCTAAACCATTTTTCTCCGCTCCTCTTCACAGTATCAACCATCATGCGCTTCAACCTCACCAGGTGATGGTGAACAATAATCATGGGTTGGCGTCTTCCGGTGGCAGAAGTGGTGAGATGATGAGTGAGGCGAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAACCTATGTTCTCAAGTCAAACAACTTTGGGCAGCTTCATCCAAGTTTATACTGCAACACTTATCCAGCGAAGACCATTGGCAGCACTGCAAATGGCATGCCCAATCTTCCTCTTCAAAATTACAATAATGACCAGTACACACTCCTCAACCCTGCTTGTAGAAAAACAGATGATCATGAAGCGGAAGCTTCCTCCGGGGGCGGCCGGCGGAGAGGTTTGCAACGGCGCCGAGTTTCTGCCTGCAACGAGGTCGAGAGGAGGTGCACCAACTACAATTGCAACACCAATTTCACGCCCATGTGGCGTAAAGGCCCTCTTGGTCCTAAGAGCCTTTGCAACGCCTGCGGCATAAGGTATAGAAAGGAAATAATGAATAAGGAAGCAATGGCAGCAGAGAACAACCACGGGTAG

Protein sequence

MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANANANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNHG

Homology

[Close]

BLAST of CmoCh20G000600 vs. ExPASy Swiss-Prot
Match: Q9LT45 (GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.9e-12
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 172 NDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACN-------EVERRCTNYNCNT 231
           +D+Y L++   R+   + +   +   +      +R+  C        E  ++CTN NCN 
Sbjct: 108 SDEYVLIDVPARRARRNNSTVMTNSWKENATP-KRIRGCGGFCGGRIEGMKKCTNMNCNA 167

Query: 232 NFTPMWRKGPLGPKSLCNACGIRYRKE 252
             TPMWR+GPLGPKSLCNACGI++RKE
Sbjct: 168 LNTPMWRRGPLGPKSLCNACGIKFRKE 193

[Close]

BLAST of CmoCh20G000600 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 211 NEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENN 264
           N + RRC   NC+T  TP+WR GP GPKSLCNACGIR++KE   + A  A N+
Sbjct: 71  NLLARRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNS 119

[Close]

BLAST of CmoCh20G000600 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 213 VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 252
           ++RRC   NC T  TP+WR GP GPKSLCNACGIRY+KE
Sbjct: 150 LDRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE 186

[Close]

BLAST of CmoCh20G000600 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 213 VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 252
           ++RRC   NC T  TP+WR GP GPKSLCNACGIRY+KE
Sbjct: 150 LDRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE 186

[Close]

BLAST of CmoCh20G000600 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 5.2e-09
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 176 TLLNPACRKTDDHEAEASSG----------GGRRRGLQRRRVSACNEVERRCTNYNCNTN 235
           +L  P+ R  D H   +++           GG  +    ++    + + RRC   +C+T 
Sbjct: 43  SLGTPSTRLDDHHRFSSANSNNISGDFYIHGGNAKTSSYKKGGVAHSLPRRCA--SCDTT 102

Query: 236 FTPMWRKGPLGPKSLCNACGIRYRKE 252
            TP+WR GP GPKSLCNACGIR++KE
Sbjct: 103 STPLWRNGPKGPKSLCNACGIRFKKE 126

[Close]

BLAST of CmoCh20G000600 vs. ExPASy TrEMBL
Match: A0A6J1FTP0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448354 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.1e-153
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL
Sbjct: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240

Query: 241 CNACGIRYRKEIMNKEAMAAENNHG 266
           CNACGIRYRKEIMNKEAMAAENNHG
Sbjct: 241 CNACGIRYRKEIMNKEAMAAENNHG 265

[Close]

BLAST of CmoCh20G000600 vs. ExPASy TrEMBL
Match: A0A6J1JEF0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111483776 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.2e-143
Identity = 252/265 (95.09%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWR MSQMKT EYDH RFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN
Sbjct: 1   MEPHIWRQMSQMKTHEYDHHRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHSKP FSAPLHSINHHALQPHQVMVNNNHGLASSGGR+GEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSKPLFSAPLHSINHHALQPHQVMVNNNHGLASSGGRNGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKT+GSTAN   NLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTVGSTANSTANLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRK DDHEAEASS G RRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL
Sbjct: 181 ACRKADDHEAEASS-GSRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240

Query: 241 CNACGIRYRKEIMNKEAMAAENNHG 266
           CNACGIRYRKEIMNKEA+AAENNHG
Sbjct: 241 CNACGIRYRKEIMNKEAVAAENNHG 264

[Close]

BLAST of CmoCh20G000600 vs. ExPASy TrEMBL
Match: A0A5A7TDI3 (GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00190 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.7e-83
Identity = 182/275 (66.18%), Postives = 199/275 (72.36%), Query Frame = 0


Query: 1   MEPH-IWRPMSQMKTQEYD-HPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANAN 60
           ME H IWR   QMK+ EYD H RF SESQVDLTLRLGFPNG                   
Sbjct: 1   MESHQIWR---QMKSHEYDHHRRFQSESQVDLTLRLGFPNG------------------- 60

Query: 61  ANANAGERPDIDH---SKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEA 120
              +AGERPDIDH   + PFFS P      HALQ HQ M  NN GLA    R+ EMMSE 
Sbjct: 61  ---SAGERPDIDHHHNNNPFFSTPF-----HALQTHQ-MTANNQGLA----RNNEMMSEP 120

Query: 121 NYNPHQIVWSKELKTYVLKSNNFGQLHPSLY-CNTYPAKTIGSTA--NGMPNLPL--QNY 180
           NYNPHQIVWSK+LKTYVLKSNN+GQLHPS Y   T+ AK I ++   N  PNLPL  + +
Sbjct: 121 NYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQAKPIATSTPNNSTPNLPLPKKGH 180

Query: 181 NNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMW 240
           NND YTLLNPA R +DDHEAEASS GGRR+G +RRR SA N+VERRCTNYNCNTNFTPMW
Sbjct: 181 NNDLYTLLNPASRISDDHEAEASS-GGRRKGSRRRRASATNDVERRCTNYNCNTNFTPMW 239

Query: 241 RKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNHG 266
           RKGPLGPKSLCNACGIRYRKE MNKEAMAAEN++G
Sbjct: 241 RKGPLGPKSLCNACGIRYRKETMNKEAMAAENSNG 239

[Close]

BLAST of CmoCh20G000600 vs. ExPASy TrEMBL
Match: A0A6J1DIM0 (GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 154/269 (57.25%), Postives = 169/269 (62.83%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           ME  +WR                SESQVDLTLRLGFPNGN                    
Sbjct: 1   MESQLWRRF------------LRSESQVDLTLRLGFPNGN-------------------- 60

Query: 61  ANAGERPD--IDHSKPFFSAPLHSINHHALQPHQV-MVNNNHGLASSGGRSGEMMSEANY 120
              G  PD   DH+KP FS PL    HH  Q HQV  VNNN GL S GG     MSEANY
Sbjct: 61  ---GGHPDDHTDHNKPLFSPPL----HHLRQTHQVAAVNNNVGLESCGG-----MSEANY 120

Query: 121 NPHQIVWSKELKTYVLKSNNFGQL--HPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQY 180
           NP+QI+WSKELKTYVLKSNN   L  H  +  N       GST N + N+PLQ  +ND Y
Sbjct: 121 NPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN--GSTTNNLANVPLQTNSNDLY 180

Query: 181 TLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPL 240
           TLLNPA R TDDHE E SS G RR+  + RRVS  +E E+RCTNYNCNTNFTPMWRKGPL
Sbjct: 181 TLLNPASRSTDDHEDETSS-GSRRKASRLRRVSH-DEPEKRCTNYNCNTNFTPMWRKGPL 221

Query: 241 GPKSLCNACGIRYRKEIMNKEAMAAENNH 265
           GPKSLCNACGIRYRKE+MN+EAM AEN+H
Sbjct: 241 GPKSLCNACGIRYRKELMNREAMTAENSH 221

[Close]

BLAST of CmoCh20G000600 vs. ExPASy TrEMBL
Match: A0A0A0L0J0 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-62
Identity = 136/181 (75.14%), Postives = 147/181 (81.22%), Query Frame = 0


Query: 91  HQVMVNNNHGLASSGGRSGEMMSEANY-NPHQIVWSKELKTYVLKS-NNFG-QLHPSLYC 150
           +QVM  NN GL     R+ EMMSE NY NPHQIVWSK+LKTYVLKS NNFG QLHPS Y 
Sbjct: 2   NQVMA-NNQGLT----RNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYP 61

Query: 151 NTYPAKTI-GSTANGMPNLPL--QNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQR 210
           NT+ AK I  ST N  PNLPL  + +NND YTLLNPA R  DDHEAEASS  GRR+G +R
Sbjct: 62  NTHQAKPIPTSTPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASS-AGRRKGSRR 121

Query: 211 RRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNH 266
           RRVSA N+VERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE MNKEAMAAEN++
Sbjct: 122 RRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSN 176

[Close]

BLAST of CmoCh20G000600 vs. NCBI nr
Match: XP_022943672.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita moschata])

HSP 1 Score: 550.8 bits (1418), Expect = 6.3e-153
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL
Sbjct: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240

Query: 241 CNACGIRYRKEIMNKEAMAAENNHG 266
           CNACGIRYRKEIMNKEAMAAENNHG
Sbjct: 241 CNACGIRYRKEIMNKEAMAAENNHG 265

[Close]

BLAST of CmoCh20G000600 vs. NCBI nr
Match: XP_023513295.1 (putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWRPMSQMKTQE+D PRFHSESQVDLTLRLGFPNGND+GNANA+ANANANANANAN
Sbjct: 1   MEPHIWRPMSQMKTQEHDLPRFHSESQVDLTLRLGFPNGNDSGNANASANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHSKPFFSAP+HSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSKPFFSAPIHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTAN M NLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANSMANLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL
Sbjct: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240

Query: 241 CNACGIRYRKEIMNKEAMAAENNHG 266
           CNACGIRYRKEIMNKEA+AAENNHG
Sbjct: 241 CNACGIRYRKEIMNKEAVAAENNHG 265

[Close]

BLAST of CmoCh20G000600 vs. NCBI nr
Match: KAG7010246.1 (GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 531.9 bits (1369), Expect = 3.0e-147
Identity = 258/265 (97.36%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNG  NANANANANANANAN
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNG--NANANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHS PFFSAPLHSINHH LQPHQVMVNNNHGLASSG R+GEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSIPFFSAPLHSINHHPLQPHQVMVNNNHGLASSGSRNGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTAN MPNLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANSMPNLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL
Sbjct: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240

Query: 241 CNACGIRYRKEIMNKEAMAAENNHG 266
           CNACGIRYRKEIMNKEAMAAENNHG
Sbjct: 241 CNACGIRYRKEIMNKEAMAAENNHG 263

[Close]

BLAST of CmoCh20G000600 vs. NCBI nr
Match: XP_022985849.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita maxima])

HSP 1 Score: 518.1 bits (1333), Expect = 4.5e-143
Identity = 252/265 (95.09%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWR MSQMKT EYDH RFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN
Sbjct: 1   MEPHIWRQMSQMKTHEYDHHRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHSKP FSAPLHSINHHALQPHQVMVNNNHGLASSGGR+GEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSKPLFSAPLHSINHHALQPHQVMVNNNHGLASSGGRNGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKT+GSTAN   NLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTVGSTANSTANLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRK DDHEAEASS G RRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL
Sbjct: 181 ACRKADDHEAEASS-GSRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240

Query: 241 CNACGIRYRKEIMNKEAMAAENNHG 266
           CNACGIRYRKEIMNKEA+AAENNHG
Sbjct: 241 CNACGIRYRKEIMNKEAVAAENNHG 264

[Close]

BLAST of CmoCh20G000600 vs. NCBI nr
Match: KAG6570370.1 (Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475.7 bits (1223), Expect = 2.6e-130
Identity = 231/240 (96.25%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPNGNDNGNANANANANANANANAN 60
           MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFP+GNDNG    NANANANANANAN
Sbjct: 1   MEPHIWRPMSQMKTQEYDHPRFHSESQVDLTLRLGFPSGNDNG----NANANANANANAN 60

Query: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGGRSGEMMSEANYNPH 120
           ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSG R+GEMMSEANYNPH
Sbjct: 61  ANAGERPDIDHSKPFFSAPLHSINHHALQPHQVMVNNNHGLASSGSRNGEMMSEANYNPH 120

Query: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANGMPNLPLQNYNNDQYTLLNP 180
           QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTAN MPNLPLQNYNNDQYTLLNP
Sbjct: 121 QIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTIGSTANSMPNLPLQNYNNDQYTLLNP 180

Query: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKSL 240
           ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPK L
Sbjct: 181 ACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTPMWRKGPLGPKLL 236

[Close]

BLAST of CmoCh20G000600 vs. TAIR 10
Match: AT3G20750.1 (GATA transcription factor 29 )

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-13
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 172 NDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACN-------EVERRCTNYNCNT 231
           +D+Y L++   R+   + +   +   +      +R+  C        E  ++CTN NCN 
Sbjct: 108 SDEYVLIDVPARRARRNNSTVMTNSWKENATP-KRIRGCGGFCGGRIEGMKKCTNMNCNA 167

Query: 232 NFTPMWRKGPLGPKSLCNACGIRYRKE 252
             TPMWR+GPLGPKSLCNACGI++RKE
Sbjct: 168 LNTPMWRRGPLGPKSLCNACGIKFRKE 193

[Close]

BLAST of CmoCh20G000600 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 211 NEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENN 264
           N + RRC   NC+T  TP+WR GP GPKSLCNACGIR++KE   + A  A N+
Sbjct: 71  NLLARRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNS 119

[Close]

BLAST of CmoCh20G000600 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-10
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 176 TLLNPACRKTDDHEAEASSG----------GGRRRGLQRRRVSACNEVERRCTNYNCNTN 235
           +L  P+ R  D H   +++           GG  +    ++    + + RRC   +C+T 
Sbjct: 43  SLGTPSTRLDDHHRFSSANSNNISGDFYIHGGNAKTSSYKKGGVAHSLPRRCA--SCDTT 102

Query: 236 FTPMWRKGPLGPKSLCNACGIRYRKE 252
            TP+WR GP GPKSLCNACGIR++KE
Sbjct: 103 STPLWRNGPKGPKSLCNACGIRFKKE 126

[Close]

BLAST of CmoCh20G000600 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.4e-10
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 215 RRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENN 264
           RRC   NC+T  TP+WR GP GPKSLCNACGIR++KE   +   AA  N
Sbjct: 152 RRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRTTAATGN 196

[Close]

BLAST of CmoCh20G000600 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-09
Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 169 NYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVERRCTNYNCNTNFTP 228
           N++ D +  LN   +     +  A++   R   +     S  N V R C+  +CNT  TP
Sbjct: 186 NFDEDHHEDLN--FKNVLTRKTTAATTENRYNTINENGYSNNNGVIRVCS--DCNTTKTP 245

Query: 229 MWRKGPLGPKSLCNACGIRYRKEIMNKEAMAA 261
           +WR GP GPKSLCNACGIR RK    + AMAA
Sbjct: 246 LWRSGPRGPKSLCNACGIRQRK--ARRAAMAA 271

The following BLAST results are available for this feature:

BLAST of CmoCh20G000600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT45	3.9e-12	40.23	GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1	[more]
Q6QPM2	1.8e-09	56.60	GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2	[more]
B8AX51	3.1e-09	69.23	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]
Q6L5E5	3.1e-09	69.23	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]
Q9ZPX0	5.2e-09	37.21	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]

BLAST of CmoCh20G000600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTP0	3.1e-153	100.00	GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JEF0	2.2e-143	95.09	GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5A7TDI3	5.7e-83	66.18	GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1DIM0	2.0e-64	57.25	GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4...	[more]
A0A0A0L0J0	9.5e-62	75.14	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 P...	[more]

BLAST of CmoCh20G000600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943672.1	6.3e-153	100.00	GATA zinc finger domain-containing protein 8-like [Cucurbita moschata]	[more]
XP_023513295.1	1.4e-147	96.98	putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo]	[more]
KAG7010246.1	3.0e-147	97.36	GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022985849.1	4.5e-143	95.09	GATA zinc finger domain-containing protein 8-like [Cucurbita maxima]	[more]
KAG6570370.1	2.6e-130	96.25	Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic, partial [Cucurbita...	[more]

BLAST of CmoCh20G000600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20750.1	2.8e-13	40.23	GATA transcription factor 29	[more]
AT4G36620.1	1.3e-10	56.60	GATA transcription factor 19	[more]
AT2G18380.1	3.7e-10	37.21	GATA transcription factor 20	[more]
AT3G50870.1	6.4e-10	59.18	GATA type zinc finger transcription factor family protein	[more]
AT5G56860.1	3.2e-09	41.30	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 211..263 e-value: 2.2E-11 score: 53.8
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 217..251 e-value: 8.1E-16 score: 57.3
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 221..265 score: 10.989174
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 221..250 e-value: 3.60504E-11 score: 55.4566
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 211..264 e-value: 2.9E-13 score: 51.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..77
None	No IPR available	PANTHER	PTHR45658:SF36	GATA TRANSCRIPTION FACTOR 17-RELATED	coord: 140..258
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 140..258
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 212..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G000600.1	CmoCh20G000600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding