CmoCh20G000400 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G000400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	splicing factor 1-like isoform X1
Location	Cmo_Chr20: 250971 .. 256541 (+)
RNA-Seq Expression	CmoCh20G000400
Synteny	CmoCh20G000400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGGCCCAATGAGCTGAAAACAAGGGAACCGCATACCGGACGCCGGACGGGAGACACCGTGTCTGTCTGAAGCCATTCCCAGAGAACTTGGTTATGTGCGGCAATTCTTCATCGTGCGTTCAGTTCTGAAGAAGATAGTGGTTCAGGTAATTTCATTTCTCTTTCGCATGGTTTTCGTTTCGTTGTTGAGATGATTTTGGGTATGGAAAGCAAAATGGAGTTTACTGTTAGCCCCATTCTTCCCAGTGCAACTCCAAAATAAGCAACAAAGTTGTATTTTGCACCAGCATTTCTTGTTAAGCTATGTAATTCCATTGGGTGCAAGAAAATTTGAAGCAATTTCTAATTTCTAATTTCGTTGTCTTTGAGACCAGCAGCTAAGATTTGCAATCTGAGAGGTGGAGGTGTTTTCTTGTAAATATAACATTTGCTAACTTCATGAATCACGATCACAAAGATTATGGCGTTCTAGAGAAATGTGTCAAATGTGATTATAATTTTATTTGTGCTATGTGTATAAGAACAGTCTTTTTCTGTTAATCAAAGCACAGTTGAGTGTTGTTCCAGTCTTGTTAACGTGTTCTAGTTAGACAAAAGAGTTTGAGATCATGTTTTATGTAATAGCTAAGTAATTGTTTTTTTAATATCCGTGAATGTTGGATATTGCTATATAGAATTTGGTTCCAAGAGGTCCCTTTTACTGACCGATTGTCAAATGAATAGAACATTTCTTCTGTAAAAGATTGTGGTTAAGTTACCTCAGTTAATTAAAAACTTACCAGGCGCCATGTCTGATCTTTCCACGAACTGATATCCCCTTGCTATTTACCACATGTCATTCTATGAACTGTTATAAAATATTATTATACACAGGGTCATACGAATTTCTTGTTCATTTGATCTATGTTGTTCGGGAATTCTTTACACAAAAGAGTGTAAATGACAATTTCAAGGTTATATGTACTCGTTGATTTCTCATATATGTTTTATATCATATGTTCTTAAGGTGATTGGGGAAGAATATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGAAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAAGGGGAGGCTCATAGCTTATCAGGTATTTGTGGATTTCTACTCTTTGTCTTCACCCCGCCGCACTTTTTCGTGTATGAATGGCATGTGTTGAAGTCACATTTCACAATCAATAGAAAACGTGTATTCCCCTCCTTCATCTTGTTTATTCTGTGAGCTTTTGAAGTGCAACGAATCACTACCAATTTGGGGGTTGGTTTATTTGATGTATTATCTGGGATAATTTCCTGCTCAGTCTTCTGTGTGACTGTTTCGCATGGAAGATTCCCATTCCAAGTGCTACTTAGTGACATAACTGCCTCTATGGTTATACATATTTTGAGCAGACTCGATTGGAACAAATCAGGGTACTCCTTAAATCTGGAACTTTGGAGGTTCCAAAGACACAAGTTTCTGAAGCTGAGAATGTGGATGATAATTCCCCTGGACCTCAAGGGAATAATAAGGTAAGTTCAGAGCTCCTATTATTTCCTCAACCAGTATTTTTCGTAGGCTATGGAACTGTTTTTTTTTTTTTTTTTGGATAATGGAACTGTTGTTTTAAGAAAATAAGAACAAATAAATGTATAACTGTCATTATTTTGTATGATTTTGATGTATGCCTTCTTCAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTATACTTAGTTAGCGACTTGTTTTTATTATGTCCTCGAATTGAATTATTTTTGTTATCTGTAGAAATTTTATTGCTGATACAGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACCTCTCCCGGTAAGATTGGTCTTGGATTACTTTTCTTCTGTGGTTAGTGAATATATTAACCTTTTATTTTATTCACTCTGTTCCTCAAGGAAACTAGAAACATATGAACTTAATCATTCTGTCACTCAAAGATAACCATGTTTTATGTCTCGATCATAACTTTTCCTGTTTAACATATGATGGGACTTGGAATGATTTTTTTTTTTTTCTTTGAAGGAAAAAGAAAATTTTCGTTGATGAAATGGAAAATTGCAAGAAAGTAGCAGCAAGGGTATCTAATTATAGCACTGTATTTCTCGTTTTCACAAGTCAATCATGATCTTTTTTAATGTCCCCCTACTACATGAGGATCATTCACTTCATTTATAAAATCCCATCATGCTAGGAAATATTTTCCTTCGCCAAATGGAATCTATATATTGCGAATTTAGTGAACTTATTTCATGTTAAAGTTGAGAATTTTACCTTCTGAGGAGGTGCCGAAGTAACGGAGAGATCTCATAATCATCTTCTCTAATGTGATGTTTAAAATGCTCCAGTGCATTGGAGATTTTTGCTCATTCGTTCTGAGTTCCCTCCGTTTATGTAGTTTTTGTAGACCAGTTTAAGCTATTGTTTCCCTGATCATATGGAATTTACCTCGTAGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGTAAAAAAAAAAATCATTTTAGATTATGAGATGTTGTACTAAAGATTATCTCTGTTTCATAAACTTTTAATAGATATTTCCTTCACTAAATATGTCAGGAGACTGGAGCCAAAATACGAATTTGCGGCATTAAAGCAGGGACAGGTGAAAAGGTGAACCCTTAGATCATGAAAGTCAAAAATATTTTTCTGATGAAATGAAAGTCATAGTATGTTCTATACTGCAAAGAAAAGCCGAAGGACCATATTTTTAGAATCTGGGGCATGACAATATTTTTACTCTTTTTGCTTCCCCCCACCTTCCCTTATTCTTACAGGATGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTACGTTTGCATGTCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGTTAGTCATTTGCGTCAAGAAAAAGAACTGATCTCCACGGTTTTCATCTTATTTTAGACAATTTTTTCTCATTATTTATAACTCATTGCCTTCGTCTCACAGGGAAATCTGGCCACTGGCTCCACATTGTCTGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCGCCAACTCCGATGCAAGGCCAGTTTCGTTATCCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTGCACAGGACTTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAGTTCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGCCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCCTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCATCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCATGGTGTTAATTCTTCTGGCACAGCATCTGCAAATGCAGCAGTAGCCAATGTAGATGGATATGCATCTTTTACTTCTGGGCCGCCCACCCCCCAAGCTATGAGTATACATAAAAATCACCCTATTACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACTATTTGCAGCACATAATCCTGCTGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCAACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCATACAATTCTGAATTTGAACATTCAAAACACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCGCCATCTTTCCATCCAGCAGCCCCAAATTTTATGAGAGCTGCCAATCAACCCTTTCCCGGACCTCAAGCTGGCAGCCAGATAGGTAATCATCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCGGCTAGGATTCCTGCTTTCCTCGATCAAGGTCCTCGAACACAACTGCATCAAGGAAACTTTAGTCCAGCCATGCAAATGCAAATGCAAATGCCGAACTTGCCACGCAATTTTACTCACAGACCCGGGAATGCCATGCAACTTGAACAATGTTTCCCCATGCGAGCTCCTCGACCTGAAGTCCGCTTTACTCCCCCACGGTACAGTAGCAATCTGGCGTTTGTTTCTGGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTCTCGCCTACATCTGTAGCTGGTACACAACAGCAGGGGAGCAATCCGCCAAGGTGAAAACTGCTGAAGTGCATTGGGTGTTTGTAGTTCTGAATTTGTCAAGTGCTGCACTTCTACGACAGAGGGAAAAGCTCAGATAGCCTGCTAAGGTCCGAATGAGCACTCTTTGCTGATATAGAAAAGTTGACTTTTGTATTCATGTTTCGCTAAAAAATATGATAGATTTCTTGGAATGGATGTGAGTTGATGCTTTGCTGGTGAATGATAGTCGTACCCTTTCAATGGATCCTATGAGGGGCGGGGTTCGATTTTGATAATTTCCTCAGTCATCTTTAAGGCCTCCAGTTTCATCCATTATACGACGGTAGTCCTCACTATTCTCTCTCCCAGTTAGCCTCCCTGATCTCCGAAAGAATCTTCTCTTGATCCCTCGCTACCTCTGACTGTCCTCCCCAGTCGTAGTGTGGGACATTGTTGCATGGGTGGCCGAAAACGACCAATTTTCACTGGTTGCCCGTTAGATTTAGCAGGTTCAGACATTAATCTTTCTAGTTGATACCCTTTTTAGATTAAGGTTAAGAATTTAGAAGGCCAATAAATTACAAAAATTTCCCCTGGAAACCATCCGTTTAAAGAATGCTCTTTTTATCTTTTCAATACTGTGATATTGTCCCTTACATTTATCACATTACCTAG

mRNA sequence

GTCGGCCCAATGAGCTGAAAACAAGGGAACCGCATACCGGACGCCGGACGGGAGACACCGTGTCTGTCTGAAGCCATTCCCAGAGAACTTGGTTATGTGCGGCAATTCTTCATCGTGCGTTCAGTTCTGAAGAAGATAGTGGTTCAGGTGATTGGGGAAGAATATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGAAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAAGGGGAGGCTCATAGCTTATCAGACTCGATTGGAACAAATCAGGGTACTCCTTAAATCTGGAACTTTGGAGGTTCCAAAGACACAAGTTTCTGAAGCTGAGAATGTGGATGATAATTCCCCTGGACCTCAAGGGAATAATAAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACCTCTCCCGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGAGACTGGAGCCAAAATACGAATTTGCGGCATTAAAGCAGGGACAGGTGAAAAGGATGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTACGTTTGCATGTCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGCTCCACATTGTCTGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCGCCAACTCCGATGCAAGGCCAGTTTCGTTATCCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTGCACAGGACTTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAGTTCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGCCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCCTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCATCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCATGGTGTTAATTCTTCTGGCACAGCATCTGCAAATGCAGCAGTAGCCAATGTAGATGGATATGCATCTTTTACTTCTGGGCCGCCCACCCCCCAAGCTATGAGTATACATAAAAATCACCCTATTACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACTATTTGCAGCACATAATCCTGCTGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCAACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCATACAATTCTGAATTTGAACATTCAAAACACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCGCCATCTTTCCATCCAGCAGCCCCAAATTTTATGAGAGCTGCCAATCAACCCTTTCCCGGACCTCAAGCTGGCAGCCAGATAGGTAATCATCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCGGCTAGGATTCCTGCTTTCCTCGATCAAGGTCCTCGAACACAACTGCATCAAGGAAACTTTAGTCCAGCCATGCAAATGCAAATGCAAATGCCGAACTTGCCACGCAATTTTACTCACAGACCCGGGAATGCCATGCAACTTGAACAATGTTTCCCCATGCGAGCTCCTCGACCTGAAGTCCGCTTTACTCCCCCACGGTACAGTAGCAATCTGGCGTTTGTTTCTGGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTCTCGCCTACATCTGTAGCTGGTACACAACAGCAGGGGAGCAATCCGCCAAGGTGAAAACTGCTGAAGTGCATTGGGTGTTTGTAGTTCTGAATTTGTCAAGTGCTGCACTTCTACGACAGAGGGAAAAGCTCAGATAGCCTGCTAAGGTCCGAATGAGCACTCTTTGCTGATATAGAAAAGTTGACTTTTGTATTCATGTTTCGCTAAAAAATATGATAGATTTCTTGGAATGGATGTGAGTTGATGCTTTGCTGGTGAATGATAGTCGTACCCTTTCAATGGATCCTATGAGGGGCGGGGTTCGATTTTGATAATTTCCTCAGTCATCTTTAAGGCCTCCAGTTTCATCCATTATACGACGGTAGTCCTCACTATTCTCTCTCCCAGTTAGCCTCCCTGATCTCCGAAAGAATCTTCTCTTGATCCCTCGCTACCTCTGACTGTCCTCCCCAGTCGTAGTGTGGGACATTGTTGCATGGGTGGCCGAAAACGACCAATTTTCACTGGTTGCCCGTTAGATTTAGCAGGTTCAGACATTAATCTTTCTAGTTGATACCCTTTTTAGATTAAGGTTAAGAATTTAGAAGGCCAATAAATTACAAAAATTTCCCCTGGAAACCATCCGTTTAAAGAATGCTCTTTTTATCTTTTCAATACTGTGATATTGTCCCTTACATTTATCACATTACCTAG

Coding sequence (CDS)

ATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGAAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAAGGGGAGGCTCATAGCTTATCAGACTCGATTGGAACAAATCAGGGTACTCCTTAAATCTGGAACTTTGGAGGTTCCAAAGACACAAGTTTCTGAAGCTGAGAATGTGGATGATAATTCCCCTGGACCTCAAGGGAATAATAAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACCTCTCCCGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGAGACTGGAGCCAAAATACGAATTTGCGGCATTAAAGCAGGGACAGGTGAAAAGGATGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTACGTTTGCATGTCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGCTCCACATTGTCTGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCGCCAACTCCGATGCAAGGCCAGTTTCGTTATCCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTGCACAGGACTTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAGTTCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGCCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCCTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCATCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCATGGTGTTAATTCTTCTGGCACAGCATCTGCAAATGCAGCAGTAGCCAATGTAGATGGATATGCATCTTTTACTTCTGGGCCGCCCACCCCCCAAGCTATGAGTATACATAAAAATCACCCTATTACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACTATTTGCAGCACATAATCCTGCTGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCAACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCATACAATTCTGAATTTGAACATTCAAAACACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCGCCATCTTTCCATCCAGCAGCCCCAAATTTTATGAGAGCTGCCAATCAACCCTTTCCCGGACCTCAAGCTGGCAGCCAGATAGGTAATCATCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCGGCTAGGATTCCTGCTTTCCTCGATCAAGGTCCTCGAACACAACTGCATCAAGGAAACTTTAGTCCAGCCATGCAAATGCAAATGCAAATGCCGAACTTGCCACGCAATTTTACTCACAGACCCGGGAATGCCATGCAACTTGAACAATGTTTCCCCATGCGAGCTCCTCGACCTGAAGTCCGCTTTACTCCCCCACGGTACAGTAGCAATCTGGCGTTTGTTTCTGGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTCTCGCCTACATCTGTAGCTGGTACACAACAGCAGGGGAGCAATCCGCCAAGGTGA

Protein sequence

MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIGNHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR

Homology

[Close]

BLAST of CmoCh20G000400 vs. ExPASy Swiss-Prot
Match: Q9LU44 (Splicing factor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SF1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-21
Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 65  GGNESANGENVKQTQRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIRV 124
           GG +S  G      +R ++W           PD  +D          + A  +RL +I  
Sbjct: 115 GGTDSGTGTR----KRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISR 174

Query: 125 LLKSGTL--EVPKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNP 184
           +L+SG    + P+ Q S +     ++ G + N +  +A   E L  E++E+I +I+K NP
Sbjct: 175 MLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQEIIAQIIKKNP 234

Query: 185 SYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAG 244
           ++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETGAKI I G K  
Sbjct: 235 AFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRG-KGS 294

Query: 245 TGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSI 278
             E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  +
Sbjct: 295 VKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPV 335

[Close]

BLAST of CmoCh20G000400 vs. ExPASy Swiss-Prot
Match: Q54BM5 (Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-16
Identity = 74/219 (33.79%), Postives = 113/219 (51.60%), Query Frame = 0


Query: 105 RLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPGPQGNNKNIQALN-----NELLELEKRE 164
           R+++I   +  G +E      +E +     SP P  +N   ++        E L+ E+ +
Sbjct: 100 RVDEITKKITIGPIE-----FTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQKERHQ 159

Query: 165 VIGEILKLNPSYKAPPDYRP--LLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKET 224
           ++    ++NP+YK P DY+P    K   + +P+K +P YNFIGLI GP G  QKR+EKE+
Sbjct: 160 LVVTAQQINPTYKPPSDYQPPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKES 219

Query: 225 GAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKID-AAISVIELLITS 284
           GAKI I     G G   + KPT +   +N  +EL+V ++ADT D++D A + V E LI  
Sbjct: 220 GAKIAI----RGKGSSRDGKPTKLQFQEN--DELHVLLTADTVDQLDKAEVLVREFLIPV 279

Query: 285 ISG-NLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPV 315
             G N      L +L   E + + R     + N   TPV
Sbjct: 280 EEGKNEHKRQQLREL--AEMNGTLRERPAYMGNRSWTPV 305

[Close]

BLAST of CmoCh20G000400 vs. ExPASy Swiss-Prot
Match: O74555 (Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bpb1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-07
Identity = 133/509 (26.13%), Postives = 211/509 (41.45%), Query Frame = 0


Query: 99  LIAYQTRLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKR 158
           L +   RLE+I   L++G +     + S +     ++ G + N + I+    + LE E+ 
Sbjct: 104 LYSLNVRLEEITQKLRTGDVVPHHRERSPSPPPQYDNHGRRLNTREIR--YKKKLEDERH 163

Query: 159 EVIGEILKLNPSYKAPPDY-RPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKET 218
            +I   +K+ P ++AP DY RP   ++ + +PVK+YP  NFIGL+ GP G   K +E ++
Sbjct: 164 RIIERAMKMVPGFRAPSDYRRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKS 223

Query: 219 GAKIRICG---IKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLI 278
           GAKI I G   +K G G       +D     N  E+L+  ++AD+ DKI+ AI +I+ +I
Sbjct: 224 GAKIAIRGKGSVKEGKGR------SDPSVRGNMEEDLHCLVTADSEDKINHAIKLIDNVI 283

Query: 279 TSIS-----------GNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQL 338
            + +             L   +TL+  +  +E+   +  G         P      M+ +
Sbjct: 284 QTAASVPEGQNDLKRNQLRQLATLNGTLRDDENQVCQNCGNVGHRRFDCPERINHTMNIV 343

Query: 339 --------QVYAPTPMQGQ-------------------FRYPSAWPSHNLPPAPAF---- 398
                    +    P++ Q                       SA  + N  P  +     
Sbjct: 344 CRHCGSIGHIARDCPVRDQQPPMADSTADREYQSLMQELGGGSAISNGNGEPQKSIEFSE 403

Query: 399 ---ISPQ---DPP--------SSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMT 458
               SPQ    PP        SS +  PAP A   +   P  P P QQ PA     P ++
Sbjct: 404 SGAASPQAGHPPPWAAASTSVSSSTSSPAPWAKPASSAAPSNPAPWQQ-PAAPQSAPALS 463

Query: 459 QTSHVGQPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGS 518
                  P       Q+ ++ PSN+          +PS   P +PG+S P  LP      
Sbjct: 464 MNPSSLPPWQQ--PTQQSAVQPSNL----------VPSQNAPFIPGTSAP--LPPTT--F 523

Query: 519 IPPG-PRPDRPLAPSIVSTGFSGPAVGSSASMGPNNM-----GQMALSIAPPFLPRAAPP 536
            PPG P P  P AP + +   S P +       P  M     G  A+  A P +P A  P
Sbjct: 524 APPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVP-AMPGIPGATAP 583

[Close]

BLAST of CmoCh20G000400 vs. ExPASy Swiss-Prot
Match: Q15637 (Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-06
Identity = 139/574 (24.22%), Postives = 211/574 (36.76%), Query Frame = 0


Query: 86  PDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPGP------Q 145
           P LT++    + R    Q ++E +   L++G L +P        N +D SP P      +
Sbjct: 42  PGLTRE----QERAYIVQLQIEDLTRKLRTGDLGIP-------PNPEDRSPSPEPIYNSE 101

Query: 146 GNNKNIQAL-NNELLELEKREVIGEILKLNPSYKAPPDYRP--LLKEDSLPLPVKEYPGY 205
           G   N +     + LE E+  +I E++ LNP +K P DY+P      D + +P  EYP  
Sbjct: 102 GKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEI 161

Query: 206 NFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMS 265
           NF+GL+ GP G   K +EKE  AKI I G   G+ ++ ++   D        E L+  ++
Sbjct: 162 NFVGLLIGPRGNTLKNIEKECNAKIMIRG--KGSVKEGKVGRKDGQMLPGEDEPLHALVT 221

Query: 266 ADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPN 325
           A+T + +  A+  I  ++      + T    +DL   +    +R  GT   +       +
Sbjct: 222 ANTMENVKKAVEQIRNILKQ---GIETPEDQNDLRKMQLRELARLNGTLRED-------D 281

Query: 326 QGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAP---VAFNP 385
             ++   Q      +           + ++     F  P DP S+  +       ++   
Sbjct: 282 NRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMA 341

Query: 386 AFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVPSNVSNPNFTGSGQ 445
                PVP             P  T  +   +P   A     PSL+ +  S P +  SG 
Sbjct: 342 ELGEAPVPA-----SVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGP 401

Query: 446 LPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNN 505
             S P   M G           PG    GP       PS+  TG  G   G      PN 
Sbjct: 402 SESRPYHGMHGGG---------PGGPGGGPHSFPHPLPSL--TGGHG---GHPMQHNPN- 461

Query: 506 MGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANV---DGYASFTSG----PPTPQAM 565
            G     + PP  P    PH     G    +  + +     G      G    PP P  M
Sbjct: 462 -GPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGM 521

Query: 566 SIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNP 625
                    PP P P  G  P      P   +       PP PP ++S  +  P   Q  
Sbjct: 522 --------MPPPPPPPSGQPPP-PPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQN 558

Query: 626 SPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAP 641
           +  T  +    + P  P  QQ A+ A S  P AP
Sbjct: 582 TTTTTTSAGTGSIP--PWQQQQAAAAAS--PGAP 558

[Close]

BLAST of CmoCh20G000400 vs. ExPASy Swiss-Prot
Match: Q64213 (Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6)

HSP 1 Score: 53.9 bits (128), Expect = 9.4e-06
Identity = 137/574 (23.87%), Postives = 210/574 (36.59%), Query Frame = 0


Query: 86  PDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPGP------Q 145
           P LT++    + R    Q ++E +   L++G L +P        N +D SP P      +
Sbjct: 42  PGLTRE----QERAYIVQLQIEDLTRKLRTGDLGIP-------PNPEDRSPSPEPIYNSE 101

Query: 146 GNNKNIQAL-NNELLELEKREVIGEILKLNPSYKAPPDYRP--LLKEDSLPLPVKEYPGY 205
           G   N +     + LE E+  +I E++ LNP +K P DY+P      D + +P  EYP  
Sbjct: 102 GKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEI 161

Query: 206 NFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMS 265
           NF+GL+ GP G   K +EKE  AKI I G   G+ ++ ++   D        E L+  ++
Sbjct: 162 NFVGLLIGPRGNTLKNIEKECNAKIMIRG--KGSVKEGKVGRKDGQMLPGEDEPLHALVT 221

Query: 266 ADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPN 325
           A+T + +  A+  I  ++      + T    +DL   +    +R  GT   +       +
Sbjct: 222 ANTMENVKKAVEQIRNILKQ---GIETPEDQNDLRKMQLRELARLNGTLRED-------D 281

Query: 326 QGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAP---VAFNP 385
             ++   Q      +           + ++     F  P DP S+  +       ++   
Sbjct: 282 NRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMA 341

Query: 386 AFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVPSNVSNPNFTGSGQ 445
                PVP             P  T  +   +P   A     PSL+ +  S P +  SG 
Sbjct: 342 ELGEAPVPA-----SVGSTSGPATTPLASAPRPAAPASNPPPPSLMSTTQSRPPWMNSGP 401

Query: 446 LPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNN 505
             + P   M G           PG    GP       PS+  TG  G   G      PN 
Sbjct: 402 SENRPYHGMHGGG---------PGGPGGGPHSFPHPLPSL--TGGHG---GHPMQHNPN- 461

Query: 506 MGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANV---DGYASFTSG----PPTPQAM 565
            G     + PP  P    PH     G    +  + +     G      G    PP P  M
Sbjct: 462 -GPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGM 521

Query: 566 SIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNP 625
                    PP P P  G  P      P   +       PP PP ++S  +  P   Q  
Sbjct: 522 --------MPPPPPPPSGQPPP-PPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQN 558

Query: 626 SPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAP 641
           +  T  +    + P  P  QQ A+ A S  P  P
Sbjct: 582 TTTTTTSAGTGSIP--PWQQQQAAAAAS--PGTP 558

[Close]

BLAST of CmoCh20G000400 vs. ExPASy TrEMBL
Match: A0A6J1FUX8 (splicing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448345 PE=4 SV=1)

HSP 1 Score: 1532.7 bits (3967), Expect = 0.0e+00
Identity = 785/785 (100.00%), Postives = 785/785 (100.00%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmoCh20G000400 vs. ExPASy TrEMBL
Match: A0A6J1FY22 (splicing factor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448345 PE=4 SV=1)

HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 782/785 (99.62%), Postives = 782/785 (99.62%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAENVDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmoCh20G000400 vs. ExPASy TrEMBL
Match: A0A6J1JBW8 (splicing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE=4 SV=1)

HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 758/785 (96.56%), Postives = 766/785 (97.58%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmoCh20G000400 vs. ExPASy TrEMBL
Match: A0A6J1J889 (splicing factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE=4 SV=1)

HSP 1 Score: 1462.6 bits (3785), Expect = 0.0e+00
Identity = 755/785 (96.18%), Postives = 763/785 (97.20%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmoCh20G000400 vs. ExPASy TrEMBL
Match: A0A6J1DJY7 (branchpoint-bridging protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021231 PE=4 SV=1)

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 624/815 (76.56%), Postives = 664/815 (81.47%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEK S IE  + KMSGAT++S APMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIEPGNMKMSGATISSPAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKK GGNES NGEN KQ QR TKWGPDLTQDTAVRKGRLIAYQTRLEQI  LLKSGTLEV
Sbjct: 61  NKKSGGNESVNGENDKQAQRKTKWGPDLTQDTAVRKGRLIAYQTRLEQITELLKSGTLEV 120

Query: 121 PKTQVSE--AENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYR 180
           P+TQ S   AENV+D SPG Q ++KNIQ  N ELLELEKREVIGEILKLNPSYKAPPDYR
Sbjct: 121 PETQDSALGAENVEDKSPGSQASDKNIQVQNTELLELEKREVIGEILKLNPSYKAPPDYR 180

Query: 181 PLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKP 240
           PLLKED  PLPVKEYPGYNFIGLIYGPSGENQKRLEKETG K+RICGIKA TGEKDEIKP
Sbjct: 181 PLLKEDRFPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGVKMRICGIKAETGEKDEIKP 240

Query: 241 TDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSS 300
           TD HETQNAYEELYV MSADTFDKIDAAISVIELLITSISGNL TGST SDLVSTE SSS
Sbjct: 241 TDGHETQNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLTTGSTFSDLVSTEVSSS 300

Query: 301 SRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAW----PSHNLPPAPAFIS 360
           S+AEGTT+SN+GQTPVPNQGVM Q+QVYAPT +QGQF YPS W    PSHNL PAP FIS
Sbjct: 301 SQAEGTTISNIGQTPVPNQGVMQQVQVYAPTSVQGQFHYPSTWFPAGPSHNLTPAPGFIS 360

Query: 361 PQDP--------------------PSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQ 420
           PQ+P                    PSSF+RPP  + FNPAF GPPV PPRQQ P QDLQQ
Sbjct: 361 PQNPPSVRNNPIHLSTPTSNISNVPSSFARPPTQIPFNPAFHGPPVHPPRQQLPVQDLQQ 420

Query: 421 PFMTQTSHVGQPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQL 480
           PFMTQTSHVGQ RV+ LT+QRP LV SNVSNPNFTGSG LPSG LPNMPGS++PS     
Sbjct: 421 PFMTQTSHVGQSRVHGLTIQRPPLVQSNVSNPNFTGSGPLPSGLLPNMPGSAVPS----- 480

Query: 481 VPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHG 540
              SIPP   PDRPLAP +VSTGFSGP VG SAS+GPNNMGQ ALS+APP  P  A PHG
Sbjct: 481 ---SIPPASLPDRPLAPIMVSTGFSGPTVGGSASVGPNNMGQTALSLAPPLGPHTALPHG 540

Query: 541 VNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLF---AA 600
           VNSSG     AA AN+D Y+SF SGP  PQA  +H N PI  P+PSPQMGHRP F   +A
Sbjct: 541 VNSSG-----AAPANMDVYSSFPSGPSNPQATGVHTNRPIAAPVPSPQMGHRPPFSVPSA 600

Query: 601 HNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQNTPTVPTLQQPASG 660
           HNPAGNFIAGSAS  PTPPTNTSNFTFQPRGPQNP   TILNLNIQN  TVPTLQ PASG
Sbjct: 601 HNPAGNFIAGSASNLPTPPTNTSNFTFQPRGPQNPPTQTILNLNIQNPSTVPTLQHPASG 660

Query: 661 APSFHPAAPNFMRAANQPFPGPQAGSQIGNHQIQEV-ASNPIGMQVSARIPAFLDQGPRT 720
           APS+HPA PNF R  NQPFPGPQAGSQIGN+QIQE+ AS+PIGMQ S R+PAFLD GPRT
Sbjct: 661 APSYHPAGPNFPRVGNQPFPGPQAGSQIGNNQIQEIAASHPIGMQASPRLPAFLDPGPRT 720

Query: 721 QLHQGNFSPAMQMQMQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPRYSSNLAF 780
            LHQ NFSPA    MQMPNLP NF HRPGN MQLEQ FP+RA RPEVRF PP++  NL F
Sbjct: 721 PLHQRNFSPA----MQMPNLPGNFPHRPGNPMQLEQGFPIRATRPEVRFAPPQFGGNLTF 780

Query: 781 VSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR 786
            SG+PPP SGGQQ+YDPFSPTSV+G QQQG NP +
Sbjct: 781 CSGKPPPSSGGQQIYDPFSPTSVSGAQQQGRNPAK 798

[Close]

BLAST of CmoCh20G000400 vs. NCBI nr
Match: XP_022943634.1 (splicing factor 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1532.7 bits (3967), Expect = 0.0e+00
Identity = 785/785 (100.00%), Postives = 785/785 (100.00%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmoCh20G000400 vs. NCBI nr
Match: XP_022943635.1 (splicing factor 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 782/785 (99.62%), Postives = 782/785 (99.62%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAENVDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmoCh20G000400 vs. NCBI nr
Match: KAG7010232.1 (bpb1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1513.8 bits (3918), Expect = 0.0e+00
Identity = 776/785 (98.85%), Postives = 780/785 (99.36%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE+VDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEDVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALS+APPFLPRAAPP GVNSSGTASANAAVANVDGYASFTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSLAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQ NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRAPRPEVRFTPP+YSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPQYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmoCh20G000400 vs. NCBI nr
Match: KAG6570350.1 (Splicing factor-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1485.7 bits (3845), Expect = 0.0e+00
Identity = 759/768 (98.83%), Postives = 763/768 (99.35%), Query Frame = 0


Query: 18  MSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENVKQ 77
           MSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENVKQ
Sbjct: 1   MSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENVKQ 60

Query: 78  TQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPG 137
           TQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIR LLKSGTLEVPKTQVSEAE+VDDNSPG
Sbjct: 61  TQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRELLKSGTLEVPKTQVSEAEDVDDNSPG 120

Query: 138 PQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYN 197
           PQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYN
Sbjct: 121 PQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYN 180

Query: 198 FIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSA 257
           FIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSA
Sbjct: 181 FIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSA 240

Query: 258 DTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQ 317
           DTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQ
Sbjct: 241 DTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQ 300

Query: 318 GVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRG 377
           GVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRG
Sbjct: 301 GVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRG 360

Query: 378 PPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSG 437
           PPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSG
Sbjct: 361 PPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSG 420

Query: 438 PLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQM 497
           PLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQM
Sbjct: 421 PLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQM 480

Query: 498 ALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPP 557
           ALS+APPFLPRAAPP GVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPP
Sbjct: 481 ALSLAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPP 540

Query: 558 IPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQ 617
           IPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSP TILNLNIQ
Sbjct: 541 IPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQ 600

Query: 618 NTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIGNHQIQEVASNPIGMQVS 677
           NTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIGNHQIQEVASNPIGMQVS
Sbjct: 601 NTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIGNHQIQEVASNPIGMQVS 660

Query: 678 ARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEV 737
           ARIPAFLDQGPRTQLHQ NFSPAMQMQMQMPNLP NFTHRPGNAMQLEQCFPMRAPRPEV
Sbjct: 661 ARIPAFLDQGPRTQLHQRNFSPAMQMQMQMPNLPGNFTHRPGNAMQLEQCFPMRAPRPEV 720

Query: 738 RFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR 786
           RFTPP+YSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR
Sbjct: 721 RFTPPQYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR 768

[Close]

BLAST of CmoCh20G000400 vs. NCBI nr
Match: XP_022986681.1 (splicing factor 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 758/785 (96.56%), Postives = 766/785 (97.58%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmoCh20G000400 vs. TAIR 10
Match: AT3G32940.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 233.4 bits (594), Expect = 6.2e-61
Identity = 188/467 (40.26%), Postives = 253/467 (54.18%), Query Frame = 0


Query: 22  TVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIF-RVNKKLGGNESANGENVK-QTQ 81
           T TSAA     K+SMF AK+GFVIPKNKLSGSL+PIF R NK LG  +S  G   K   +
Sbjct: 2   TSTSAA-----KISMFGAKSGFVIPKNKLSGSLIPIFQRGNKTLGSADSDTGPPSKLGKK 61

Query: 82  RNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEVPKTQVSEAENVDDNSPGPQ 141
           R TKW PDL+QD AV+K R +AYQ R++QI   L+SGTLEV      E    D       
Sbjct: 62  RKTKWAPDLSQDIAVKKCRFLAYQKRVDQITQRLESGTLEV------ETNRTD------- 121

Query: 142 GNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFI 201
                        LE EKRE IGEIL+LNP YKAPPDY+PLLKE  LP+ VKE+  ++F+
Sbjct: 122 -------------LEFEKREAIGEILELNPRYKAPPDYKPLLKEARLPIDVKEHSDFSFL 181

Query: 202 GLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADT 261
            LI+G  G+ QKRLEKETGAK++I G K G GEK E+ P+D +E Q +++ELY  +S+DT
Sbjct: 182 SLIFGSQGDTQKRLEKETGAKVQIFGTKTG-GEKVELSPSDENEIQKSWQELYFQISSDT 241

Query: 262 FDKIDAAISVIELLITSISGNLATG----STLSDLVSTEESSSSRAEGTTVSNMGQTPVP 321
           ++K+DAAI+V+ELL++S+SGN   G    S++S+++ST   +S      T     +T   
Sbjct: 242 YEKVDAAIAVVELLMSSVSGNTGAGAAPPSSISEIISTIPGNSIAT--ATAPTSERTTDH 301

Query: 322 NQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQD-PPSSFSRPPAPVAFNPA 381
           +Q + H    +  +         +  P H  PP   F+S           P   +  NP 
Sbjct: 302 SQVLQHGSSFHLSS---------NQAPLH--PPLEHFVSGLGYNIQEQELPKNSMNLNPL 361

Query: 382 FRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVPSNVSN--------- 441
           F    +P P       D   P     SHV +P         P   P ++SN         
Sbjct: 362 FAQQLLPVP------HDTSLP---PGSHVPRP---------PDSFPFSLSNTPRTYSVTL 405

Query: 442 PNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPS 473
           P ++GS   P GP   +  S++ +  P   P  +P   +  RPLAP+
Sbjct: 422 PPYSGSQIQPIGPRSTVRPSTLFTFHPVHRPTLLPDIDQSVRPLAPN 405

[Close]

BLAST of CmoCh20G000400 vs. TAIR 10
Match: AT5G51300.1 (splicing factor-related )

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-22
Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 65  GGNESANGENVKQTQRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIRV 124
           GG +S  G      +R ++W           PD  +D          + A  +RL +I  
Sbjct: 115 GGTDSGTGTR----KRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISR 174

Query: 125 LLKSGTL--EVPKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNP 184
           +L+SG    + P+ Q S +     ++ G + N +  +A   E L  E++E+I +I+K NP
Sbjct: 175 MLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQEIIAQIIKKNP 234

Query: 185 SYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAG 244
           ++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETGAKI I G K  
Sbjct: 235 AFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRG-KGS 294

Query: 245 TGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSI 278
             E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  +
Sbjct: 295 VKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPV 335

[Close]

BLAST of CmoCh20G000400 vs. TAIR 10
Match: AT5G51300.2 (splicing factor-related )

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-22
Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 65  GGNESANGENVKQTQRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIRV 124
           GG +S  G      +R ++W           PD  +D          + A  +RL +I  
Sbjct: 115 GGTDSGTGTR----KRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISR 174

Query: 125 LLKSGTL--EVPKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNP 184
           +L+SG    + P+ Q S +     ++ G + N +  +A   E L  E++E+I +I+K NP
Sbjct: 175 MLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQEIIAQIIKKNP 234

Query: 185 SYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAG 244
           ++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETGAKI I G K  
Sbjct: 235 AFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRG-KGS 294

Query: 245 TGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSI 278
             E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  +
Sbjct: 295 VKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPV 335

[Close]

BLAST of CmoCh20G000400 vs. TAIR 10
Match: AT5G51300.3 (splicing factor-related )

HSP 1 Score: 105.1 bits (261), Expect = 2.5e-22
Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 65  GGNESANGENVKQTQRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIRV 124
           GG +S  G      +R ++W           PD  +D          + A  +RL +I  
Sbjct: 115 GGTDSGTGTR----KRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISR 174

Query: 125 LLKSGTL--EVPKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNP 184
           +L+SG    + P+ Q S +     ++ G + N +  +A   E L  E++E+I +I+K NP
Sbjct: 175 MLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQEIIAQIIKKNP 234

Query: 185 SYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAG 244
           ++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETGAKI I G K  
Sbjct: 235 AFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRG-KGS 294

Query: 245 TGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSI 278
             E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  +
Sbjct: 295 VKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPV 335

[Close]

BLAST of CmoCh20G000400 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 5.7e-06
Identity = 31/106 (29.25%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 173 APPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGE 232
           A P   P+ +   L LPV  YP +NF+G + GP G + KR+E  TG ++ I G  +    
Sbjct: 126 ASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 185

Query: 233 KDEIKPTDVHETQNAYEELYVCMSAD-TFDKIDAAISVIELLITSI 278
           + E K       ++  E+L++ + AD   D +D  +   + +I  +
Sbjct: 186 EKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 231

The following BLAST results are available for this feature:

BLAST of CmoCh20G000400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU44	3.6e-21	33.77	Splicing factor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SF1 PE=1 SV=1	[more]
Q54BM5	3.5e-16	33.79	Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV...	[more]
O74555	2.2e-07	26.13	Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
Q15637	1.5e-06	24.22	Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4	[more]
Q64213	9.4e-06	23.87	Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6	[more]

BLAST of CmoCh20G000400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUX8	0.0e+00	100.00	splicing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448345 ...	[more]
A0A6J1FY22	0.0e+00	99.62	splicing factor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448345 ...	[more]
A0A6J1JBW8	0.0e+00	96.56	splicing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE...	[more]
A0A6J1J889	0.0e+00	96.18	splicing factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE...	[more]
A0A6J1DJY7	0.0e+00	76.56	branchpoint-bridging protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmoCh20G000400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943634.1	0.0e+00	100.00	splicing factor 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022943635.1	0.0e+00	99.62	splicing factor 1-like isoform X2 [Cucurbita moschata]	[more]
KAG7010232.1	0.0e+00	98.85	bpb1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570350.1	0.0e+00	98.83	Splicing factor-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022986681.1	0.0e+00	96.56	splicing factor 1-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh20G000400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G32940.1	6.2e-61	40.26	RNA-binding KH domain-containing protein	[more]
AT5G51300.1	2.5e-22	33.77	splicing factor-related	[more]
AT5G51300.2	2.5e-22	33.77	splicing factor-related	[more]
AT5G51300.3	2.5e-22	33.77	splicing factor-related	[more]
AT3G08620.1	5.7e-06	29.25	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 197..228 e-value: 1.2E-4 score: 21.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 177..299 e-value: 4.1E-23 score: 83.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 184..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 568..594
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 753..785
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 764..785
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 578..594
None	No IPR available	PANTHER	PTHR11208:SF98	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 26..776
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 197..223 score: 8.554656
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 26..776

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G000400.1	CmoCh20G000400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding