CmoCh20G000320 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G000320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr20: 221423 .. 221742 (+)
RNA-Seq ExpressionCmoCh20G000320
SyntenyCmoCh20G000320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATGGATGGTTCAGAGGGTGAAGATGGAGTGTAAAGAGTGTAAATAAACGTAGATGAAGCTGTGAAATTGAACATGGCCCAAACATCAGACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACAGCGTTGAAACCGACACAGTATGTTATCTTAATTGCAGCAGCTGAGGATAGAGTGAATGGGAAGTCTGGGTGGAAATGGAGCGCATATGCGACCATGTGGATGAGACCATATTACTGCAAATGCCAGCCACTCGGTAGCTGTTTGGAATTTTTCATGTACATAGTCGGTGGCTGTCAAACTTAA

mRNA sequence

ATGAACATGGATGGTTCAGAGGGTGAAGATGGAGTACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACAGCGTTGAAACCGACACAGTATGTTATCTTAATTGCAGCAGCTGAGGATAGAGTGAATGGGAAGTCTGGGTGGAAATGGAGCGCATATGCGACCATGTGGATGAGACCATATTACTGCAAATGCCAGCCACTCGGTAGCTGTTTGGAATTTTTCATGTACATAGTCGGTGGCTGTCAAACTTAA

Coding sequence (CDS)

ATGAACATGGATGGTTCAGAGGGTGAAGATGGAGTACCCTGCAGAGGGGTTTGGCGTGAGCTCATGGCGGCTGGAACAGCGTTGAAACCGACACAGTATGTTATCTTAATTGCAGCAGCTGAGGATAGAGTGAATGGGAAGTCTGGGTGGAAATGGAGCGCATATGCGACCATGTGGATGAGACCATATTACTGCAAATGCCAGCCACTCGGTAGCTGTTTGGAATTTTTCATGTACATAGTCGGTGGCTGTCAAACTTAA

Protein sequence

MNMDGSEGEDGVPCRGVWRELMAAGTALKPTQYVILIAAAEDRVNGKSGWKWSAYATMWMRPYYCKCQPLGSCLEFFMYIVGGCQT
Homology
[Close]
BLAST of CmoCh20G000320 vs. NCBI nr
Match: KAG6570340.1 (Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.5 bits (171), Expect = 8.1e-09
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 13 PCRGVWRELMAAGTALKPTQYVILIAAAEDRVN 46
          PCRGVWRELMAAGTALKPTQY ILIAAAEDRVN
Sbjct: 49 PCRGVWRELMAAGTALKPTQYAILIAAAEDRVN 81

[Close]
BLAST of CmoCh20G000320 vs. NCBI nr
Match: KAG6570333.1 (Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.5 bits (171), Expect = 8.1e-09
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 13  PCRGVWRELMAAGTALKPTQYVILIAAAEDRVN 46
           PCRGVWRELMAAGTALKPTQY ILIAAAEDRVN
Sbjct: 186 PCRGVWRELMAAGTALKPTQYAILIAAAEDRVN 218

The following BLAST results are available for this feature:
BLAST of CmoCh20G000320 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G000320 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G000320 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570340.18.1e-0996.97Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subs... [more]
KAG6570333.18.1e-0996.97Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subs... [more]
BLAST of CmoCh20G000320 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G000320.1CmoCh20G000320.1mRNA