CmoCh20G000270 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATACCTCTCCTAACCTCACGTATATCAACTCCAAGAGAAGACTACTTATATAATTAGGGATATTTGAGTAAACTCTTCATCGATAAAGTGATACCGAAGCAGTAAAATTCAGTGTCTAGTTCAACCATGCGTGAGGGTTTTTTTAATTAATTGAAGGTGAGATTTCTAACATTTGATCTTTTGGATTAGATCATAACGCTTTAATTATTGAACTATGTTTCGATCAACAACATTCAACACGACGGGCTCATTGATCCAGCTCTAATGGTCTAAAATACCTTCCATCTATGAGGTAAGTCCCAACTTTAAGCCGCACGCCCCACACGTCCTTCGGTTTTCTTGACACGATTCTGTTCAATTACGCACGCAGCAGGCAGGCATTAGTTACAAGCGTTGCACATAAGGTGTTCGAAGCAATGCCAAAGACAGAGGACGAAGATCGATCGACCGCTCACCTGCCAACGTCGCCGGGGTTGATTATGCCGGAATTGACCCTGAGGCATGGAACCGAGGCTGCGGTCTTTATCATTTTGGGAGCCTCGACTACGATAACGGGGGAGCCGATCTCGAGTTTCCAACTCTTTGCCGGCGGCGTGGGGTCTGCTGCCGATGCACTTGATTCGCACTTCACGAGGCTTCGCGGTTGAGACCGAGTGCTTAAGCTGTTGGAGACGTTGAAGGAAGAGATGGAACTGACGATGCCGATGCCGATGCTTGGGCGTGGAATTGCTGTAGCAGAAGAAAGAGAAGTGGCCATTGGAACCGTATCTTATCACCAACGTTTCAATTCGAGGATATGTTTGGGAGTGGATATTGAGGTTAAAGCTTTTGTTTTGTCTTTTTTTTAAGCTCGAG CCATACCTCTCCTAACCTCACGTATATCAACTCCAAGAGAAGACTACTTATATAATTAGGGATATTTGAGTAAACTCTTCATCGATAAAGTGATACCGAAGCAGTAAAATTCAGTGTCTAGTTCAACCATGCGTGAGGGTTTTTTTAATTAATTGAAGGTGAGATTTCTAACATTTGATCTTTTGGATTAGATCATAACGCTTTAATTATTGAACTATGTTTCGATCAACAACATTCAACACGACGGGCTCATTGATCCAGCTCTAATGGTCTAAAATACCTTCCATCTATGAGCAGGCAGGCATTAGTTACAAGCGTTGCACATAAGGTGTTCGAAGCAATGCCAAAGACAGAGGACGAAGATCGATCGACCGCTCACCTGCCAACGTCGCCGGGGTTGATTATGCCGGAATTGACCCTGAGGCATGGAACCGAGGCTGCGGTCTTTATCATTTTGGGAGCCTCGACTACGATAACGGGGGAGCCGATCTCGAGTTTCCAACTCTTTGCCGGCGGCGTGGGGTCTGCTGCCGATGCACTTGATTCGCACTTCACGAGGCTTCGCGGTTGAGACCGAGTGCTTAAGCTGTTGGAGACGTTGAAGGAAGAGATGGAACTGACGATGCCGATGCCGATGCTTGGGCGTGGAATTGCTGTAGCAGAAGAAAGAGAAGTGGCCATTGGAACCGTATCTTATCACCAACGTTTCAATTCGAGGATATGTTTGGGAGTGGATATTGAGGTTAAAGCTTTTGTTTTGTCTTTTTTTTAAGCTCGAG ATGAGCAGGCAGGCATTAGTTACAAGCGTTGCACATAAGGTGTTCGAAGCAATGCCAAAGACAGAGGACGAAGATCGATCGACCGCTCACCTGCCAACGTCGCCGGGGTTGATTATGCCGGAATTGACCCTGAGGCATGGAACCGAGGCTGCGGTCTTTATCATTTTGGGAGCCTCGACTACGATAACGGGGGAGCCGATCTCGAGTTTCCAACTCTTTGCCGGCGGCGTGGGGTCTGCTGCCGATGCACTTGATTCGCACTTCACGAGGCTTCGCGGTTGA MSRQALVTSVAHKVFEAMPKTEDEDRSTAHLPTSPGLIMPELTLRHGTEAAVFIILGASTTITGEPISSFQLFAGGVGSAADALDSHFTRLRG Homology
BLAST of CmoCh20G000270 vs. ExPASy TrEMBL
Match: A0A7J9BXC5 (Yippee domain-containing protein (Fragment) OS=Gossypium gossypioides OX=34282 GN=Gogos_014045 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.3e-09 Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CmoCh20G000270 vs. ExPASy TrEMBL
Match: A0A7J9GW06 (Yippee domain-containing protein (Fragment) OS=Gossypium harknessii OX=34285 GN=Gohar_012030 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.3e-09 Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CmoCh20G000270 vs. ExPASy TrEMBL
Match: A0A7J9JCD5 (Yippee domain-containing protein (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_015603 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.8e-08 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CmoCh20G000270 vs. ExPASy TrEMBL
Match: M4CQU4 (RING-type domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 9.8e-06 Identity = 34/63 (53.97%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of CmoCh20G000270 vs. ExPASy TrEMBL
Match: A0A1J3G603 (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR10299_c0_g1_i1_g.33837 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 8.3e-05 Identity = 32/59 (54.24%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of CmoCh20G000270 vs. NCBI nr
Match: MBA0801680.1 (hypothetical protein [Gossypium harknessii]) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-08 Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CmoCh20G000270 vs. NCBI nr
Match: MBA0740860.1 (hypothetical protein [Gossypium gossypioides]) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-08 Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CmoCh20G000270 vs. NCBI nr
Match: MBA0831115.1 (hypothetical protein [Gossypium armourianum]) HSP 1 Score: 67.8 bits (164), Expect = 5.7e-08 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of CmoCh20G000270 vs. NCBI nr
Match: KAG6761835.1 (hypothetical protein POTOM_035072 [Populus tomentosa]) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06 Identity = 39/69 (56.52%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of CmoCh20G000270 vs. NCBI nr
Match: KAF2580504.1 (hypothetical protein F2Q68_00000730 [Brassica cretica]) HSP 1 Score: 60.8 bits (146), Expect = 7.0e-06 Identity = 39/77 (50.65%), Postives = 43/77 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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