CmoCh19G011160 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G011160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	KRR1 small subunit processome component
Location	Cmo_Chr19: 9490033 .. 9494978 (+)
RNA-Seq Expression	CmoCh19G011160
Synteny	CmoCh19G011160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTCCGTCCGCATGTAATTTCTTTTTCCCGCTATCTTTCTTATTTTTCTAAACCCTATATTACCACCAAAATTCCCCTCCGCCGCTCGCCACTCCTGCCCGACGTAGTCTCAGCGGCTTCCGCGCCTCCTGCACTCTCAACTGCTGCAGTCCACCCTCCTGTCCCTCCCTTTAACGCTCTCTCGCCTCTTGAAGCAATTAGAGTGACTTATCTCTGTTTGCCATTTGTGATATCGCGCCGCCGCTCAGATTCAGCCTAAGGTTTTCTTTTGTTGTTTTATTTTTAAATTTGTTTACCTCGAAGAGGAAAATCAAAAGTAGCAGCTTTGTTGTCGATTTGTTTCTCCAACAACGTTTAATCAGTCTAAATTAGAACATAAAGCTAAATATGCATCGGAGTTTGTATGAAGGTGTTGTTGTTGTTGTTGTTTTTTTTTTTTTTTTTTTAACGTGGAAGAAACTATGATGCATACGGGGGCAAATATGAATTATACCAATAGTTGTTGTATCAGTTTAAATCCGTAACTGTAGAATCAATTTAGACCCCTAGGGGTTAGTCTTTTTCAAAGCGGTCATTGTATAAACTTCTCTAAATGCAGAGTTTAAACTAAGTTATAGAGAAAAAAAAAAAAAAAAAAACGAGCATCAAATAGATAGTGGAAGGTTTTCATTAATTTTGAGCAATTTTTCATTAACCTTGTCTTTCTTTAGTTTTCTCTACTTATTAAAAAATTATTCTTTCTGCCATCGTTGGTTTTCCAGGATAATCCAACATGGCGACGGAGGAGATAGAGCAACAGCAAAATAAGACCAAACATAAGGGGAAGCATGACAAACCGAAGCCATGGGACGAAGATCCTAACATTGATCGATGGAAAGTTGAGAAGTTTGATGCCTCTTGGAATGAAGGCGGAATGCTTGAAGTCAGCTCTTTCTCTACTCTGTTTCCTGTGTACCGAGGTAAGGAGTTTTATGTTTTTTCTTTTCAATTGTACTCTCTTGTTTTTTCGGGAGGATTAGTTTGGAATGAATGAATGAATTAGAGTGTGTGGTTTGTTTACCTCGAATTTTGAGGTCCTGATTGTCTTAGATTGTTAAAGTTGCACCTTATTTAATATAAGTCTAGGTTGCGTACAACATTATGAAACAGTTCGTTGTAGTCCTACTGAAATTATTTGGAGTTACCGTGAACATTGATTTGTTTCAATCGCTCTGTTCGCCAAGTAGTTTGGCTACGAAAGAATTATTATTTTATGTTAATTGCTCATAGGCCTATATTCTTCAATCACTCTGTTTGCCAAGTAGTTTGGCTACGAAAGAATTATTATTTTATGTTAATTGCTCATAGGCCTATATTCTTCAATCGCTCTGTTCGCCAATTTGTTTGGCTACGAAAGAATTATTATTTTATGTTAATTGCTCATAGGCCTATATTCTTCAATCGCTCTGTTCGCCAAGTAGTTTGGCTACAAAAGAATTATTATTTTATGTTAATTGCTCATAGGCCTGTATTCTTTATTTAGCGTTTTGTCTATTAGTTCTTTTTCTACCCGGAGGGTAACATCGTGGCCGGATGATCCGGTTTTGAAAAGGTTTTGAGGAAGGCAAGAAAACTTTCCTATCTAGTGCCACAACCTATTTTTTCTATGCTTTTCCTGAAAAATAGTTAGGTGGCAACAGAATAACAAGGTTCTGTTTTCTAACTCTATGATTTTGGTAAGCTTTGTCCGTGGAGAATATCCAGTTCATTTTCTTTTTTCAATATGCTTGTTTTGTCTCACTTAAAGATATTTCTGCTGTACAATTGGATTGACTGTGCACAAAAATCTGATTCCGATTTTTCCATGTTGCAGAAAAGTATTTGCAAGATGCATGGCCAGTTGTGAAGTCTGCATTGAAAGAATTTGGCATTGCTTGTGATCTGAATCTGGTAAGAGTCCATAAACTCCTAATAGAGAAATGAAAGAGTTTATTACCCTAATGAAGGATGGTTTTGATTCTGTTGTTTGAAATGTTTTGAGTCCAGTTGTTATTCTCACTGCATGCATTTTAATCTACTACGTTTGGTCAGGTTGAAGGATCAATGACAGTGTCAACAACTAGAAAGACCAAGGATCCGTACATTATTGTCAAGGCTAGGGATCTTATCAAGCTTTTGTCTAGAAGTGTTCCTGCTCCTCAGGTTAAACAATCATTTGATTTATTATATTTTATTTCTCTTTTGAGGTGGCAGTTTGAGTCTTTCTTTCGCTGATCCCATTAATTGGTACCTTGTATTGAATTTTTTGATCATGGGTTGTGTGTCAGGCAATAAAAATACTGGACGATGAAATGCAATGTGATATTATTAAGATTGGGAACTTGGTACGCAAGAAGGTAAGTGTCATTTACTTTATTTGATGTTCTTATTCTGTTGTTGCATTTGGCGAAGAAATTTGTGTAGCTGTCAGCCTTTAATCTCATTGCACATGGCTTAAGGTCTGAGGTTCACATCCTAAGTTCAAGCAGTTTATATATATGGAAACCTACAACAAAAAGTCTACATAGTATACAAATTGCTGGAAATTGAAAACCATCGGATATAGATTGAAATGTAGTTTCTGTTCTTTTGTGCCCGAACATACAACTTGAAGTTGGAATTAGCCTCTTATGTTAGAGAATAAGTTTCAGGGTTTTTGTGCATGTATCCATAATGTTGGTAATAGAGCATTATGGTATACAACAGTCTCTTAAATGAAGGACAACCATTTTCCATGTCAATTAGCATCTTTTGTCATCCTTCCCTTTACGATTACCTGCTCTACCTCTACCTTAAAATTTGATTTTGGCCTGACCTTTATTATATTGCAGGAACGATTTGTTAAACGAAGACGATTTCTTGTGGGCCCAAATTCATCAACTTTAAAGGTTCGTATAGCTTAGTTAAATGATTTCCAAGCTTACTAAGTTTCTTCATCTTGATTCATAATTCTTAGAGAGGAGCAATTGTGTTTATCTAAGTCTACGCTCTATTCATTCTCTCTTGTTTTTTAACTGTTATTCTAGCACAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAAGTACGTATATTTTCTTTTGCTGCTTGTCTTCTTTTTTTTTTTTTTTCATCTCTTCAGCTTTTCATATTCTGTAGCGTCAAATTTGTTACTGACAGGGCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTTAGGAGGATCGTGGAAGAGTGCATGATGAATAAAATGCATCCCGTATATAATATTAAGGTTTCTGGGTTTTCTTTCTGTTTATCATTTTATGTTACTCCTCGATAGCTCTCTGCATAACCTCTGCTATCTCTGCAGATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATAGGTTTCTTCCTAAGTTCAAAAAGTATGCTAGTTTGGCGTGTACTTGTTTGCTGACTTTCTCTTGTTAGAATCATGAATTTATGTTTTACATAACCATCCTTTTTCTCAGGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAGCAGAAGAAGCCGTATACACCTTTCCCTCCTCCTCAGCCACCTAGCCAGGTTCAGTAGCTGCCTTTCATTTCCTGGGGGGGTGCAATTCATCCATAACAATATTTCAAAAAGGAATTATAACGATAGCATGATAAAATAGTAGTACATAATAGTCATGGTAATCTATTCTCAATCACAAAAATAAAAATTGTAGATAAGAAACAGTCCACAGCATATTATATGCTATATTGGGAAAAAAAAAAAAACTGTCATATTCAATAAGTGCTGAAATGCCTTAAAATATATTATTTTATTGTCATAATGGAACTTTTATGGGGATTAAACGTATGCATGTTTTGCATTCTTTTTTCTCAGTGCATTCATTTCAATAAGATCTTTTGTTACGATGCATTTGCAGATTGATATACAATTGGAAACTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGCAAAGAAATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGTGAAATACATTGCAGCTCCTTGATTCAGCTTATCCAATTATTTGAACAGTTTTCATTCTTTCTACTACTACACGTGCTGTAATGCTTTTATTGATATTGGTTTTACCTTACCTCTATTCAGGAGCCCCCAAAGCAGGATACGAACATTGATGGAGATAACAATGATATAGCCACGATGGCAAAGGCCCTGAAGGTATATGGAGGGGTGTGCGTATATATACACATTAGCCATGGATACATGTATACATATACACATTAGCCATGGATACATGTATACATATACACATTAGCCATGGATACATGTATACATATGGAGGGGTGTGCGTATATATACACATTAGCCATGGATACATGTATACATATACATGCATATACATATATACATATAAACACATAGGCCGTAGATACTCCCAAGAATATTTTTAAACTGGAAATTGTTGCAACTGGTGAACTTGTTTTGTTGCTCTGCAGGAAAAGGCCAAGGCATTAGGGAAACGAAAAGCCGCAGAGAGTATCAATCCGGAAGCTTATATTGCTTCATCTAGCGATCAGAAGCATTTCAAGAAGAGATCCAAGGCATCATCGTAGAACTGTATGTCCTCGTGCATGAAATTATCAAAGCCTCTAGTTTTTTTGTAGGACTAAAATTTTTGTTACATCTCGCGGATCAGATTAGTTAATCTTGGTTTTTTAATGAGAAAAGCACGAGTCATTATTATTATTCACACTGGCTGTGGTTTTCCGTTGTTATGCACTTCACTTATCCTTTCTACATTTTTGAGTTCGTTGCTCCCTTACAACGATGAGCTCGATCGATTATTCTTCATGCC

mRNA sequence

CCCTTCTCCGTCCGCATGTAATTTCTTTTTCCCGCTATCTTTCTTATTTTTCTAAACCCTATATTACCACCAAAATTCCCCTCCGCCGCTCGCCACTCCTGCCCGACGTAGTCTCAGCGGCTTCCGCGCCTCCTGCACTCTCAACTGCTGCAGTCCACCCTCCTGTCCCTCCCTTTAACGCTCTCTCGCCTCTTGAAGCAATTAGAGTGACTTATCTCTGTTTGCCATTTGTGATATCGCGCCGCCGCTCAGATTCAGCCTAAGGATAATCCAACATGGCGACGGAGGAGATAGAGCAACAGCAAAATAAGACCAAACATAAGGGGAAGCATGACAAACCGAAGCCATGGGACGAAGATCCTAACATTGATCGATGGAAAGTTGAGAAGTTTGATGCCTCTTGGAATGAAGGCGGAATGCTTGAAGTCAGCTCTTTCTCTACTCTGTTTCCTGTGTACCGAGAAAAGTATTTGCAAGATGCATGGCCAGTTGTGAAGTCTGCATTGAAAGAATTTGGCATTGCTTGTGATCTGAATCTGGTTGAAGGATCAATGACAGTGTCAACAACTAGAAAGACCAAGGATCCGTACATTATTGTCAAGGCTAGGGATCTTATCAAGCTTTTGTCTAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGACGATGAAATGCAATGTGATATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAACGAAGACGATTTCTTGTGGGCCCAAATTCATCAACTTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAAGGCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTTAGGAGGATCGTGGAAGAGTGCATGATGAATAAAATGCATCCCGTATATAATATTAAGATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATAGGTTTCTTCCTAAGTTCAAAAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAGCAGAAGAAGCCGTATACACCTTTCCCTCCTCCTCAGCCACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGCAAAGAAATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGCCCCCAAAGCAGGATACGAACATTGATGGAGATAACAATGATATAGCCACGATGGCAAAGGCCCTGAAGGAAAAGGCCAAGGCATTAGGGAAACGAAAAGCCGCAGAGAGTATCAATCCGGAAGCTTATATTGCTTCATCTAGCGATCAGAAGCATTTCAAGAAGAGATCCAAGGCATCATCGTAGAACTGTATGTCCTCGTGCATGAAATTATCAAAGCCTCTAGTTTTTTTGTAGGACTAAAATTTTTGTTACATCTCGCGGATCAGATTAGTTAATCTTGGTTTTTTAATGAGAAAAGCACGAGTCATTATTATTATTCACACTGGCTGTGGTTTTCCGTTGTTATGCACTTCACTTATCCTTTCTACATTTTTGAGTTCGTTGCTCCCTTACAACGATGAGCTCGATCGATTATTCTTCATGCC

Coding sequence (CDS)

ATGGCGACGGAGGAGATAGAGCAACAGCAAAATAAGACCAAACATAAGGGGAAGCATGACAAACCGAAGCCATGGGACGAAGATCCTAACATTGATCGATGGAAAGTTGAGAAGTTTGATGCCTCTTGGAATGAAGGCGGAATGCTTGAAGTCAGCTCTTTCTCTACTCTGTTTCCTGTGTACCGAGAAAAGTATTTGCAAGATGCATGGCCAGTTGTGAAGTCTGCATTGAAAGAATTTGGCATTGCTTGTGATCTGAATCTGGTTGAAGGATCAATGACAGTGTCAACAACTAGAAAGACCAAGGATCCGTACATTATTGTCAAGGCTAGGGATCTTATCAAGCTTTTGTCTAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGACGATGAAATGCAATGTGATATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAACGAAGACGATTTCTTGTGGGCCCAAATTCATCAACTTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAAGGCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTTAGGAGGATCGTGGAAGAGTGCATGATGAATAAAATGCATCCCGTATATAATATTAAGATTCTCATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATAGGTTTCTTCCTAAGTTCAAAAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAGCAGAAGAAGCCGTATACACCTTTCCCTCCTCCTCAGCCACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGCAAAGAAATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGCCCCCAAAGCAGGATACGAACATTGATGGAGATAACAATGATATAGCCACGATGGCAAAGGCCCTGAAGGAAAAGGCCAAGGCATTAGGGAAACGAAAAGCCGCAGAGAGTATCAATCCGGAAGCTTATATTGCTTCATCTAGCGATCAGAAGCATTTCAAGAAGAGATCCAAGGCATCATCGTAG

Protein sequence

MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAYIASSSDQKHFKKRSKASS

Homology

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BLAST of CmoCh19G011160 vs. ExPASy Swiss-Prot
Match: O74777 (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mis3 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 9.3e-100
Identity = 193/325 (59.38%), Postives = 247/325 (76.00%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGK-HDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFP 60
           M   E   + N   +K K + + KPWD D +ID WK+E F    ++   LE SSF+TLFP
Sbjct: 1   MTEVESSTENNVIVNKNKRYRRDKPWDTD-DIDHWKIEPFTKDDSKESFLEESSFATLFP 60

Query: 61  VYREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSR 120
            YREKYL++ WP V  AL +FGI C L+LVEGSMTV TTRKT DPY I+ ARDLIKLL+R
Sbjct: 61  KYREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLAR 120

Query: 121 SVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILV 180
           SVP PQA+KI+ D + CDIIKIGN++R KERFVKRR+ L+G N  TLKALE+LT CYILV
Sbjct: 121 SVPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILV 180

Query: 181 QGNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLP 240
           QG TVA MG +KGLK+VRRIVE+CM N +HP+Y+IK LM+K+ELA DP LANE+WDRFLP
Sbjct: 181 QGTTVAVMGGYKGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLP 240

Query: 241 KFKKKTV-KQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEK 300
           +FKK+ V ++K  K ++ K YTPFPP QPPS++D+++E+GEYFL  ++K  KK  EK+E+
Sbjct: 241 QFKKRNVARRKPAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQ 300

Query: 301 QAEKTAENKRKREAAFVPPKEPPKQ 324
           Q EK  E +++R  AF+PP+E  K+
Sbjct: 301 QKEKKKEKEKERMKAFIPPEESSKK 323

[Close]

BLAST of CmoCh19G011160 vs. ExPASy Swiss-Prot
Match: B3LU25 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-96
Identity = 187/306 (61.11%), Postives = 234/306 (76.47%), Query Frame = 0


Query: 19  HDKPKPWDEDPNIDRWKVEKFDASWNEGG--MLEVSSFSTLFPVYREKYLQDAWPVVKSA 78
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 79  LKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 138
           L +  IAC L+LVEGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 139 DIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 198
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 199 RRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 258
           RR+VE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 259 KQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA 318
            +KK YTPFPP Q P ++D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 319 FVPPKE 320
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of CmoCh19G011160 vs. ExPASy Swiss-Prot
Match: B5VEQ2 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-96
Identity = 187/306 (61.11%), Postives = 234/306 (76.47%), Query Frame = 0


Query: 19  HDKPKPWDEDPNIDRWKVEKFDASWNEGG--MLEVSSFSTLFPVYREKYLQDAWPVVKSA 78
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 79  LKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 138
           L +  IAC L+LVEGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 139 DIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 198
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 199 RRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 258
           RR+VE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 259 KQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA 318
            +KK YTPFPP Q P ++D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 319 FVPPKE 320
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of CmoCh19G011160 vs. ExPASy Swiss-Prot
Match: C8Z430 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) OX=643680 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-96
Identity = 187/306 (61.11%), Postives = 234/306 (76.47%), Query Frame = 0


Query: 19  HDKPKPWDEDPNIDRWKVEKFDASWNEGG--MLEVSSFSTLFPVYREKYLQDAWPVVKSA 78
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 79  LKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 138
           L +  IAC L+LVEGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 139 DIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 198
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 199 RRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 258
           RR+VE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 259 KQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA 318
            +KK YTPFPP Q P ++D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 319 FVPPKE 320
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of CmoCh19G011160 vs. ExPASy Swiss-Prot
Match: P25586 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRR1 PE=1 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-96
Identity = 187/306 (61.11%), Postives = 234/306 (76.47%), Query Frame = 0


Query: 19  HDKPKPWDEDPNIDRWKVEKFDASWNEGG--MLEVSSFSTLFPVYREKYLQDAWPVVKSA 78
           H++ KPWD D +ID+WK+E+F    N  G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 79  LKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 138
           L +  IAC L+LVEGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 139 DIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 198
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 199 RRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 258
           RR+VE+CM N +HP+Y+IK LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 259 KQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA 318
            +KK YTPFPP Q P ++D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 319 FVPPKE 320
           F+ P+E
Sbjct: 305 FIAPEE 308

[Close]

BLAST of CmoCh19G011160 vs. ExPASy TrEMBL
Match: A0A6J1GLG6 (KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC111455438 PE=3 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.3e-209
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60
           MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV
Sbjct: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60

Query: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120
           YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS
Sbjct: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120

Query: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180
           VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ
Sbjct: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180

Query: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240
           GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK
Sbjct: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240

Query: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300
           FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA
Sbjct: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300

Query: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360
           EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE
Sbjct: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360

Query: 361 AYIASSSDQKHFKKRSKASS 381
           AYIASSSDQKHFKKRSKASS
Sbjct: 361 AYIASSSDQKHFKKRSKASS 380

[Close]

BLAST of CmoCh19G011160 vs. ExPASy TrEMBL
Match: A0A6J1HWB5 (KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468435 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.5e-205
Identity = 373/380 (98.16%), Postives = 376/380 (98.95%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60
           MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNEGGMLEVSSFSTLFPV
Sbjct: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPV 60

Query: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120
           YREKYLQDAWPVVKSALKEFGIAC+LNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS
Sbjct: 61  YREKYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120

Query: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180
           VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ
Sbjct: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180

Query: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240
           GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALA+ENWDRFLPK
Sbjct: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALASENWDRFLPK 240

Query: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300
           FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA
Sbjct: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300

Query: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360
           EKTAENKRKREA+FVPPKE PKQDT IDGDNNDIATMAKALKEKAKALGKRKAAESINPE
Sbjct: 301 EKTAENKRKREASFVPPKETPKQDTKIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360

Query: 361 AYIASSSDQKHFKKRSKASS 381
           AYIA SSDQKHFKKRSKASS
Sbjct: 361 AYIALSSDQKHFKKRSKASS 380

[Close]

BLAST of CmoCh19G011160 vs. ExPASy TrEMBL
Match: A0A5D3CP78 (KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00300 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 5.0e-189
Identity = 349/378 (92.33%), Postives = 359/378 (94.97%), Query Frame = 0


Query: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYRE 63
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNE GMLEVSSFSTLFPVYRE
Sbjct: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61

Query: 64  KYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123
           KYL+D WPVVKSALKEFGI  +LNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121

Query: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181

Query: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241

Query: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301

Query: 304 AENKRKREAAFVPPKEPPK-QDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363
           AENKRKREAAFVPPKE PK QDT  DGD NDIA MAKALKEKAKA GKRKAAE+INPEAY
Sbjct: 302 AENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEAY 361

Query: 364 IASSSDQKHFKKRSKASS 381
           IASSSDQ  FKKRSK SS
Sbjct: 362 IASSSDQPLFKKRSKTSS 379

[Close]

BLAST of CmoCh19G011160 vs. ExPASy TrEMBL
Match: A0A6J1D441 (KRR1 small subunit processome component OS=Momordica charantia OX=3673 GN=LOC111016809 PE=3 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 6.5e-189
Identity = 340/373 (91.15%), Postives = 359/373 (96.25%), Query Frame = 0


Query: 5   EIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYREK 64
           ++EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFD SWNEGGMLEVSSFSTLFP YREK
Sbjct: 8   DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREK 67

Query: 65  YLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAP 124
           YLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPAP
Sbjct: 68  YLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAP 127

Query: 125 QAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTV 184
           QAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTV
Sbjct: 128 QAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV 187

Query: 185 AAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKK 244
           AAMGSFKGLKQVRRIVE+CM+NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK+K
Sbjct: 188 AAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRK 247

Query: 245 TVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA 304
           TVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
Sbjct: 248 TVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA 307

Query: 305 ENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAYIA 364
           ENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIA
Sbjct: 308 ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIA 367

Query: 365 SSSDQKHFKKRSK 378
           SSS+Q HFKK+SK
Sbjct: 368 SSSNQPHFKKKSK 380

[Close]

BLAST of CmoCh19G011160 vs. ExPASy TrEMBL
Match: A0A1S3BGN7 (KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 PE=3 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 7.2e-188
Identity = 347/378 (91.80%), Postives = 357/378 (94.44%), Query Frame = 0


Query: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYRE 63
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNE GMLEVSSFSTLFPVYRE
Sbjct: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61

Query: 64  KYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123
           KYL+D WPVVKSALKEFGI  +LNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121

Query: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181

Query: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241

Query: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301

Query: 304 AENKRKREAAFVPPKEPPK-QDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363
           AENKRKREAAFVPP E PK QDT  DGD NDIA MAK LKEKAKA GKRKAAE+INPEAY
Sbjct: 302 AENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEAY 361

Query: 364 IASSSDQKHFKKRSKASS 381
           IASSSDQ  FKKRSK SS
Sbjct: 362 IASSSDQPLFKKRSKTSS 379

[Close]

BLAST of CmoCh19G011160 vs. NCBI nr
Match: XP_022952886.1 (KRR1 small subunit processome component homolog [Cucurbita moschata] >XP_022952887.1 KRR1 small subunit processome component homolog [Cucurbita moschata])

HSP 1 Score: 737.3 bits (1902), Expect = 6.8e-209
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60
           MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV
Sbjct: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60

Query: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120
           YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS
Sbjct: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120

Query: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180
           VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ
Sbjct: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180

Query: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240
           GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK
Sbjct: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240

Query: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300
           FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA
Sbjct: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300

Query: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360
           EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE
Sbjct: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360

Query: 361 AYIASSSDQKHFKKRSKASS 381
           AYIASSSDQKHFKKRSKASS
Sbjct: 361 AYIASSSDQKHFKKRSKASS 380

[Close]

BLAST of CmoCh19G011160 vs. NCBI nr
Match: KAG7012057.1 (mis3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 730.3 bits (1884), Expect = 8.4e-207
Identity = 377/380 (99.21%), Postives = 377/380 (99.21%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60
           MATE IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNEGGMLEVSSFSTLFPV
Sbjct: 1   MATEVIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPV 60

Query: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120
           YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS
Sbjct: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120

Query: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180
           VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ
Sbjct: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180

Query: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240
           GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK
Sbjct: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240

Query: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300
           FKKK VKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA
Sbjct: 241 FKKKIVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300

Query: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360
           EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE
Sbjct: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360

Query: 361 AYIASSSDQKHFKKRSKASS 381
           AYIASSSDQKHFKKRSKASS
Sbjct: 361 AYIASSSDQKHFKKRSKASS 380

[Close]

BLAST of CmoCh19G011160 vs. NCBI nr
Match: XP_023511730.1 (KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 728.4 bits (1879), Expect = 3.2e-206
Identity = 375/380 (98.68%), Postives = 377/380 (99.21%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60
           MATEE+EQQQNKTKHKGKHDKPKPWDEDPNIDRW VEKFD SWNEGGMLEVSSFSTLFPV
Sbjct: 1   MATEELEQQQNKTKHKGKHDKPKPWDEDPNIDRWTVEKFDPSWNEGGMLEVSSFSTLFPV 60

Query: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120
           YREKYLQDAWPVVKSALKEFGIAC+LNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS
Sbjct: 61  YREKYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120

Query: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180
           VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ
Sbjct: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180

Query: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240
           GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK
Sbjct: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240

Query: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300
           FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA
Sbjct: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300

Query: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360
           EKTAENKRKREAAFVPPKEPPKQDT IDGDNNDIATMAKALKEKAKALGKRKAAESINPE
Sbjct: 301 EKTAENKRKREAAFVPPKEPPKQDTTIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360

Query: 361 AYIASSSDQKHFKKRSKASS 381
           AYIASSSDQKHFKKRSKASS
Sbjct: 361 AYIASSSDQKHFKKRSKASS 380

[Close]

BLAST of CmoCh19G011160 vs. NCBI nr
Match: XP_022969421.1 (KRR1 small subunit processome component homolog [Cucurbita maxima] >XP_022969422.1 KRR1 small subunit processome component homolog [Cucurbita maxima])

HSP 1 Score: 723.0 bits (1865), Expect = 1.3e-204
Identity = 373/380 (98.16%), Postives = 376/380 (98.95%), Query Frame = 0


Query: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPV 60
           MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNEGGMLEVSSFSTLFPV
Sbjct: 1   MATEEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPV 60

Query: 61  YREKYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120
           YREKYLQDAWPVVKSALKEFGIAC+LNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS
Sbjct: 61  YREKYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRS 120

Query: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180
           VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ
Sbjct: 121 VPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQ 180

Query: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPK 240
           GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALA+ENWDRFLPK
Sbjct: 181 GNTVAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALASENWDRFLPK 240

Query: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300
           FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA
Sbjct: 241 FKKKTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQA 300

Query: 301 EKTAENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360
           EKTAENKRKREA+FVPPKE PKQDT IDGDNNDIATMAKALKEKAKALGKRKAAESINPE
Sbjct: 301 EKTAENKRKREASFVPPKETPKQDTKIDGDNNDIATMAKALKEKAKALGKRKAAESINPE 360

Query: 361 AYIASSSDQKHFKKRSKASS 381
           AYIA SSDQKHFKKRSKASS
Sbjct: 361 AYIALSSDQKHFKKRSKASS 380

[Close]

BLAST of CmoCh19G011160 vs. NCBI nr
Match: XP_038888683.1 (KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888684.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888685.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888686.1 KRR1 small subunit processome component homolog [Benincasa hispida])

HSP 1 Score: 688.0 bits (1774), Expect = 4.8e-194
Identity = 352/377 (93.37%), Postives = 363/377 (96.29%), Query Frame = 0


Query: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYRE 63
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNEGGMLEVSSFSTLFPVYRE
Sbjct: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYRE 61

Query: 64  KYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123
           KYL++ WPVVKSALKEFGI C+LNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 62  KYLRETWPVVKSALKEFGIVCELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121

Query: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181

Query: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243
           VAAMGSFKGLKQVRR+VEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 182 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 241

Query: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303
           KTVKQKKVKSKQKKPYTPFPPPQ PSQIDIQLETGEYFLSDKKKSAKKWQ+KQEKQAEKT
Sbjct: 242 KTVKQKKVKSKQKKPYTPFPPPQQPSQIDIQLETGEYFLSDKKKSAKKWQDKQEKQAEKT 301

Query: 304 AENKRKREAAFVPPKEPPKQDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAYI 363
           AENKRKREAAFVPPKEPP QDT  D DNNDI+ MAKALKEKAKA GKRKA E+INPEAYI
Sbjct: 302 AENKRKREAAFVPPKEPPMQDTEPDQDNNDISEMAKALKEKAKAFGKRKAMEAINPEAYI 361

Query: 364 ASSSDQKHFKKRSKASS 381
           ASSSD+ HFKKRSK SS
Sbjct: 362 ASSSDRPHFKKRSKTSS 378

[Close]

BLAST of CmoCh19G011160 vs. TAIR 10
Match: AT5G08420.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 530.4 bits (1365), Expect = 1.2e-150
Identity = 276/379 (72.82%), Postives = 317/379 (83.64%), Query Frame = 0


Query: 5   EIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYREK 64
           E +  + + K KGKH+KPKPWD+DPNIDRW +EKFD +WN  GM E S+FSTLFP YREK
Sbjct: 10  EEQNIEKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREK 69

Query: 65  YLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPAP 124
           YLQ+ WP V+SALKE+G+AC LNLVEGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPAP
Sbjct: 70  YLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAP 129

Query: 125 QAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNTV 184
           QAIKIL+DE+QCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILT CYILVQG+TV
Sbjct: 130 QAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYILVQGSTV 189

Query: 185 AAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKKK 244
           AAMG FKGLKQ+RRIVE+C+ N MHPVY+IK LMMKKEL  DPALANE+WDRFLP F+KK
Sbjct: 190 AAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRKK 249

Query: 245 TVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA 304
            VKQKK KSK+KKPYTPFPPPQPPS+ID+QLE+GEYF+SDKKKS KKWQEKQEKQ+EK+ 
Sbjct: 250 NVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEKST 309

Query: 305 ENKRKREAAFVPPKEPPKQDTNI---DGDNNDIATMAKALKEKAKALGK-RKAAESINPE 364
           ENKRKR+A+F+PP+EP   ++N    +   NDI  +  +LK K K L K +K  E +N E
Sbjct: 310 ENKRKRDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTHERVNAE 369

Query: 365 AYIA--SSSDQKHFKKRSK 378
            YIA  SSS  K  KK  K
Sbjct: 370 EYIAGPSSSADKSSKKSKK 388

The following BLAST results are available for this feature:

BLAST of CmoCh19G011160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74777	9.3e-100	59.38	KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (st...	[more]
B3LU25	2.1e-96	61.11	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11...	[more]
B5VEQ2	2.1e-96	61.11	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI...	[more]
C8Z430	2.1e-96	61.11	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalv...	[more]
P25586	2.1e-96	61.11	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC...	[more]

BLAST of CmoCh19G011160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLG6	3.3e-209	100.00	KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HWB5	6.5e-205	98.16	KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A5D3CP78	5.0e-189	92.33	KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1D441	6.5e-189	91.15	KRR1 small subunit processome component OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3BGN7	7.2e-188	91.80	KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 ...	[more]

BLAST of CmoCh19G011160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952886.1	6.8e-209	100.00	KRR1 small subunit processome component homolog [Cucurbita moschata] >XP_0229528...	[more]
KAG7012057.1	8.4e-207	99.21	mis3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023511730.1	3.2e-206	98.68	KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022969421.1	1.3e-204	98.16	KRR1 small subunit processome component homolog [Cucurbita maxima] >XP_022969422...	[more]
XP_038888683.1	4.8e-194	93.37	KRR1 small subunit processome component homolog [Benincasa hispida] >XP_03888868...	[more]

BLAST of CmoCh19G011160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08420.1	1.2e-150	72.82	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 133..236 e-value: 5.6E-49 score: 166.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 46..132 e-value: 2.5E-44 score: 151.1
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 133..237
IPR024166	Ribosomal RNA assembly KRR1	PIRSF	PIRSF006515	KRR1	coord: 1..376 e-value: 1.4E-153 score: 508.8
IPR024166	Ribosomal RNA assembly KRR1	PANTHER	PTHR12581	HIV-1 REV BINDING PROTEIN 2, 3	coord: 3..359
IPR041174	Krr1, KH1 domain	PFAM	PF17903	KH_8	coord: 52..132 e-value: 1.6E-30 score: 105.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G011160.1	CmoCh19G011160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003723	RNA binding