CmoCh19G010790 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G010790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor 3-like
Location	Cmo_Chr19: 9303892 .. 9304533 (+)
RNA-Seq Expression	CmoCh19G010790
Synteny	CmoCh19G010790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCGAGGTAGAGATATGGATCCGTTGATGGCGGCAGAGACGGTCCAAGAACCTGATAAAGAAGTGCGATTCAGAGGCGTCCGGAAGCGTCCATGGGGACGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACTCGAGTTTGGCTTGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGATGAGGCTGCTCTCTCTCTCCGGGGACCGAAGGCGAAAACGAACTTCCCGTTGCATCCATCTACTATCTCTGTTCATCAGAAAATTCCGTTCTCGCAGGAGTTTCATGATTCCGCAGGACTCTGCAAGATTAGTGACATTCCAGTCAATAGACCTACATCGAGTAGCCTGAGCTCCACCGTGGAGTCTTTTAGCGGGCCGCGGGTTTCGATTCCAGCTCCATTGGTTCCGAAAATCTGCCGGCAGTCCCTGCCGCTGGTCTCGCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCCTCGGTTGTTGATGATAGTGAGGAATATGCTCACACGTCGTCAATTCGCAGAGTTTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCTGCACGACGTCGATTTATCCGGTGATGATCTTCATGCTACTGCCCTGTGCTTTTGA

mRNA sequence

ATGCGGCGAGGTAGAGATATGGATCCGTTGATGGCGGCAGAGACGGTCCAAGAACCTGATAAAGAAGTGCGATTCAGAGGCGTCCGGAAGCGTCCATGGGGACGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACTCGAGTTTGGCTTGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGATGAGGCTGCTCTCTCTCTCCGGGGACCGAAGGCGAAAACGAACTTCCCGTTGCATCCATCTACTATCTCTGTTCATCAGAAAATTCCGTTCTCGCAGGAGTTTCATGATTCCGCAGGACTCTGCAAGATTAGTGACATTCCAGTCAATAGACCTACATCGAGTAGCCTGAGCTCCACCGTGGAGTCTTTTAGCGGGCCGCGGGTTTCGATTCCAGCTCCATTGGTTCCGAAAATCTGCCGGCAGTCCCTGCCGCTGGTCTCGCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCCTCGGTTGTTGATGATAGTGAGGAATATGCTCACACGTCGTCAATTCGCAGAGTTTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCTGCACGACGTCGATTTATCCGGTGATGATCTTCATGCTACTGCCCTGTGCTTTTGA

Coding sequence (CDS)

ATGCGGCGAGGTAGAGATATGGATCCGTTGATGGCGGCAGAGACGGTCCAAGAACCTGATAAAGAAGTGCGATTCAGAGGCGTCCGGAAGCGTCCATGGGGACGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACTCGAGTTTGGCTTGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGATGAGGCTGCTCTCTCTCTCCGGGGACCGAAGGCGAAAACGAACTTCCCGTTGCATCCATCTACTATCTCTGTTCATCAGAAAATTCCGTTCTCGCAGGAGTTTCATGATTCCGCAGGACTCTGCAAGATTAGTGACATTCCAGTCAATAGACCTACATCGAGTAGCCTGAGCTCCACCGTGGAGTCTTTTAGCGGGCCGCGGGTTTCGATTCCAGCTCCATTGGTTCCGAAAATCTGCCGGCAGTCCCTGCCGCTGGTCTCGCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCCTCGGTTGTTGATGATAGTGAGGAATATGCTCACACGTCGTCAATTCGCAGAGTTTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCTGCACGACGTCGATTTATCCGGTGATGATCTTCATGCTACTGCCCTGTGCTTTTGA

Protein sequence

MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSSLSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF

Homology

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BLAST of CmoCh19G010790 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-52
Identity = 130/233 (55.79%), Postives = 144/233 (61.80%), Query Frame = 0


Query: 1   MRRGRDM---DPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MRRGR      P+          KE+RFRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+A
Sbjct: 1   MRRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDEAALSLRGPKAKTNFPL----HPSTISVHQKIPFSQEFHDSAGLCKISDIPV 120
           EDAARAYD AA +LRGPKAKTNFPL    H      H   P +  F DS    + + I  
Sbjct: 61  EDAARAYDAAARALRGPKAKTNFPLPYAHHHQFNQGHN--PNNDPFVDSRFYPQDNPIIS 120

Query: 121 NRPTSSSLSSTVESFSGPRVSIPAPLVPKICRQ----SLPLVSPDDCHSDCDSSSSVVD- 180
            RPTSSS+SSTVESFSGPR   PAP              P V PDDCHSDCDSSSSVVD 
Sbjct: 121 QRPTSSSMSSTVESFSGPRPP-PAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDH 180

Query: 181 ---------DSEEYAHTSSIRRVLPFDLNLPPPLPPLHDVDLSGDDLHATALC 213
                    D++  A +SS R+ L FDLNLPPP+      D   DDLH TALC
Sbjct: 181 GDCEKENDNDNDNIA-SSSFRKPLLFDLNLPPPMD-----DAGADDLHCTALC 224

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BLAST of CmoCh19G010790 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-49
Identity = 124/231 (53.68%), Postives = 146/231 (63.20%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPD---KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MRRGR    +     V   +   KE+RFRGVRKRPWGR+AAEIRDPWKK RVWLGTFD+A
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDEAALSLRGPKAKTNFPLHPST-------------ISVHQKIPFSQE--FHDS 120
           E+AARAYD AA +LRGPKAKTNFP+  S+              + +Q  PF     F D 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 AGLCKISDIPVNRPTSSSLSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDS 180
                I    VNRPTSSS+SSTVESFSGPR +   P   K   ++ P+V P+DCHSDCDS
Sbjct: 121 QQQFPI----VNRPTSSSMSSTVESFSGPRPTTMKPATTKRYPRTPPVV-PEDCHSDCDS 180

Query: 181 SSSVVDDSEEYAHTSSIRRVLPFDLNLPPPLPPLHDVDL--SGDDLHATAL 212
           SSSV+DD ++ A +SS RR  PF  +L    PPL  VDL    DDLH T L
Sbjct: 181 SSSVIDDDDDIA-SSSRRRNPPFQFDL--NFPPLDCVDLFNGADDLHCTDL 223

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BLAST of CmoCh19G010790 vs. ExPASy Swiss-Prot
Match: Q9LDE4 (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.6e-43
Identity = 118/253 (46.64%), Postives = 143/253 (56.52%), Query Frame = 0


Query: 1   MRRGRDMD------PLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MR+GR         P+ A  +V+EP    R+RGVRKRPWGR+AAEIRDP KK+RVWLGTF
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEP----RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTF 60

Query: 61  DTAEDAARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIP-- 120
           D+A DAARAYD AA +LRGPKAKTNFP+  S  S  Q + +      +  LC    I   
Sbjct: 61  DSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLH----NQNLCSPPVIQNQ 120

Query: 121 -----------------------VNRPTSSSLSSTVESFSGPR--------VSIPAPLVP 180
                                  ++RP SSS+SSTV+S SGPR         S+  PL  
Sbjct: 121 IDPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHA 180

Query: 181 KICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPPLPPLHDVDL 212
                  P V+P+DCHSDCDSSSSV+DD ++ A +SS RR  PF  +L    PPL  VDL
Sbjct: 181 IKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSSS-RRKTPFQFDL--NFPPLDGVDL 240

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BLAST of CmoCh19G010790 vs. ExPASy Swiss-Prot
Match: Q9C5I3 (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 84/176 (47.73%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 23  VRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNFPL 82
           VR+RGVRKRPWGRYAAEIRDP+KK+RVWLGTFDT E+AARAYD+ A+  RG KAKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 83  HPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSSLSSTVESFSGPRVSIPAPLV-- 142
           +   I+ H               C      ++   S S SSTVES S P +++ +  V  
Sbjct: 78  Y--NINAH---------------C------LSLTQSLSQSSTVES-SFPNLNLGSDSVSS 137

Query: 143 ----PKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPP 193
               PKI  ++  +V  +   SD   SSSVV D   Y      R VL  DLN PPP
Sbjct: 138 RFPFPKIQVKAGMMVFDERSESD---SSSVVMDVVRY---EGRRVVLDLDLNFPPP 163

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BLAST of CmoCh19G010790 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 21 KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNF 80
          KEV FRGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AARAYD AA   RG KAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 81 PLHPSTISVH 91
          PL   + +V+
Sbjct: 89 PLPGESTTVN 98

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BLAST of CmoCh19G010790 vs. ExPASy TrEMBL
Match: A0A6J1GLX1 (ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111455566 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.2e-119
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF
Sbjct: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh19G010790 vs. ExPASy TrEMBL
Match: A0A6J1HWB0 (ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111468432 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 207/213 (97.18%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRDMDPLMAAETVQ P KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQGPGKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDS GLCKISD PVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSTGLCKISDFPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIPAP VPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPAPSVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLP LHDVDLSGDDLHATALCF
Sbjct: 181 RVLPFDLNLPPPLPLLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh19G010790 vs. ExPASy TrEMBL
Match: A0A5D3C642 (Ethylene-responsive transcription factor 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00030 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 189/214 (88.32%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGR  DPL A E+VQEP KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAPESVQEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISD-IPVNRPTSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQ+IPFSQ+FHDS G C+IS+ IPVNRPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSI 180
           SLSSTVESFSGPR+SIP P VPK+ R+S P V+PDDCHSDCDSSSSVVDDSEEYA +SSI
Sbjct: 121 SLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSEEYAQSSSI 180

Query: 181 RRVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RRVLPFDLNLPPPLPP HDVDLSGDDLHATALCF
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

[Close]

BLAST of CmoCh19G010790 vs. ExPASy TrEMBL
Match: A0A1S3BLI0 (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103491361 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 189/214 (88.32%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGR  DPL A E+VQEP KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAPESVQEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISD-IPVNRPTSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQ+IPFSQ+FHDS G C+IS+ IPVNRPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSI 180
           SLSSTVESFSGPR+SIP P VPK+ R+S P V+PDDCHSDCDSSSSVVDDSEEYA +SSI
Sbjct: 121 SLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSEEYAQSSSI 180

Query: 181 RRVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RRVLPFDLNLPPPLPP HDVDLSGDDLHATALCF
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

[Close]

BLAST of CmoCh19G010790 vs. ExPASy TrEMBL
Match: A0A0A0KHW7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421660 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.9e-103
Identity = 189/214 (88.32%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGR  DPL   E+VQ+P KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTVPESVQKPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISD-IPVNRPTSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQ+IPFSQ+FHDS G C+IS+ IPVNRPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSI 180
           SLSSTVESFSGPR+SIPAP VPK+ R+SLP V+PDDCHSDCDSSSSVVDDSEEYAH+SSI
Sbjct: 121 SLSSTVESFSGPRLSIPAPSVPKLRRKSLPQVAPDDCHSDCDSSSSVVDDSEEYAHSSSI 180

Query: 181 RRVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RRVLPFDLNLPPPLPP HDVDLSGDDLHATAL F
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF 214

[Close]

BLAST of CmoCh19G010790 vs. NCBI nr
Match: XP_022953046.1 (ethylene-responsive transcription factor 3-like [Cucurbita moschata])

HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF
Sbjct: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh19G010790 vs. NCBI nr
Match: XP_023511720.1 (ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.5 bits (1116), Expect = 5.3e-118
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIPAP VPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPAPSVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF
Sbjct: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh19G010790 vs. NCBI nr
Match: KAG6572422.1 (Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012022.1 Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-116
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRDMDPLMAAETVQE DKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQETDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRG KAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGLKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF
Sbjct: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh19G010790 vs. NCBI nr
Match: XP_022969417.1 (ethylene-responsive transcription factor 3-like [Cucurbita maxima])

HSP 1 Score: 422.2 bits (1084), Expect = 2.7e-114
Identity = 207/213 (97.18%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRDMDPLMAAETVQ P KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQGPGKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDS GLCKISD PVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSTGLCKISDFPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIPAP VPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPAPSVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLP LHDVDLSGDDLHATALCF
Sbjct: 181 RVLPFDLNLPPPLPLLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh19G010790 vs. NCBI nr
Match: XP_038888524.1 (ethylene-responsive transcription factor 3-like [Benincasa hispida])

HSP 1 Score: 397.5 bits (1020), Expect = 7.2e-107
Identity = 196/213 (92.02%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGR  DPL AAETV+EP KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAAETVREPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120
           ARAYDEAALSLRGPKAKTNFPLHPSTISVHQ+IPFSQEFHDS G CKIS+IPVNRPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQEFHDSGGFCKISNIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180
           LSSTVESFSGPRVSIP P VPK+ R+SLP VSPDDCHSDCDSSSSVVDDSEEYAHTSSIR
Sbjct: 121 LSSTVESFSGPRVSIPVPSVPKLRRKSLPQVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 214
           RVLPFDLNLPPPLPP HDVDLSGDDLHATAL F
Sbjct: 181 RVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF 213

[Close]

BLAST of CmoCh19G010790 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 198.0 bits (502), Expect = 7.8e-51
Identity = 124/231 (53.68%), Postives = 146/231 (63.20%), Query Frame = 0


Query: 1   MRRGRDMDPLMAAETVQEPD---KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MRRGR    +     V   +   KE+RFRGVRKRPWGR+AAEIRDPWKK RVWLGTFD+A
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDEAALSLRGPKAKTNFPLHPST-------------ISVHQKIPFSQE--FHDS 120
           E+AARAYD AA +LRGPKAKTNFP+  S+              + +Q  PF     F D 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 AGLCKISDIPVNRPTSSSLSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDS 180
                I    VNRPTSSS+SSTVESFSGPR +   P   K   ++ P+V P+DCHSDCDS
Sbjct: 121 QQQFPI----VNRPTSSSMSSTVESFSGPRPTTMKPATTKRYPRTPPVV-PEDCHSDCDS 180

Query: 181 SSSVVDDSEEYAHTSSIRRVLPFDLNLPPPLPPLHDVDL--SGDDLHATAL 212
           SSSV+DD ++ A +SS RR  PF  +L    PPL  VDL    DDLH T L
Sbjct: 181 SSSVIDDDDDIA-SSSRRRNPPFQFDL--NFPPLDCVDLFNGADDLHCTDL 223

[Close]

BLAST of CmoCh19G010790 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-44
Identity = 118/253 (46.64%), Postives = 143/253 (56.52%), Query Frame = 0


Query: 1   MRRGRDMD------PLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MR+GR         P+ A  +V+EP    R+RGVRKRPWGR+AAEIRDP KK+RVWLGTF
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEP----RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTF 60

Query: 61  DTAEDAARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIP-- 120
           D+A DAARAYD AA +LRGPKAKTNFP+  S  S  Q + +      +  LC    I   
Sbjct: 61  DSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLH----NQNLCSPPVIQNQ 120

Query: 121 -----------------------VNRPTSSSLSSTVESFSGPR--------VSIPAPLVP 180
                                  ++RP SSS+SSTV+S SGPR         S+  PL  
Sbjct: 121 IDPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHA 180

Query: 181 KICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPPLPPLHDVDL 212
                  P V+P+DCHSDCDSSSSV+DD ++ A +SS RR  PF  +L    PPL  VDL
Sbjct: 181 IKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSSS-RRKTPFQFDL--NFPPLDGVDL 240

[Close]

BLAST of CmoCh19G010790 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 84/176 (47.73%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 23  VRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNFPL 82
           VR+RGVRKRPWGRYAAEIRDP+KK+RVWLGTFDT E+AARAYD+ A+  RG KAKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 83  HPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSSLSSTVESFSGPRVSIPAPLV-- 142
           +   I+ H               C      ++   S S SSTVES S P +++ +  V  
Sbjct: 78  Y--NINAH---------------C------LSLTQSLSQSSTVES-SFPNLNLGSDSVSS 137

Query: 143 ----PKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPP 193
               PKI  ++  +V  +   SD   SSSVV D   Y      R VL  DLN PPP
Sbjct: 138 RFPFPKIQVKAGMMVFDERSESD---SSSVVMDVVRY---EGRRVVLDLDLNFPPP 163

[Close]

BLAST of CmoCh19G010790 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-26
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 21 KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNF 80
          KEV FRGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AARAYD AA   RG KAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 81 PLHPSTISVH 91
          PL   + +V+
Sbjct: 89 PLPGESTTVN 98

[Close]

BLAST of CmoCh19G010790 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 111.3 bits (277), Expect = 9.6e-25
Identity = 87/221 (39.37%), Postives = 109/221 (49.32%), Query Frame = 0


Query: 2   RRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAA 61
           + G   DP    +T     KE+R+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AA
Sbjct: 3   KMGLKPDPATTNQT-HNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 62

Query: 62  RAYDEAALSLRGPKAKTNFPLHPSTISVHQKIP--FSQEFHDSAGLCKIS--DIPVNRPT 121
           RAYD AA   RG KAKTNFP         QK+P  F++    S+ L   S   + V   T
Sbjct: 63  RAYDTAARDFRGAKAKTNFPTFLELSD--QKVPTGFARSPSQSSTLDCASPPTLVVPSAT 122

Query: 122 SSSLSSTVE--------------SFSGPRVSI------------PAPLVPKICRQSLPLV 181
           + ++   +E                S P   +            P P+        + + 
Sbjct: 123 AGNVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVA 182

Query: 182 SPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPP 193
           +   C +  DS SS V D E      S  ++L  DLNLPPP
Sbjct: 183 TKMACGAQSDSDSSSVVDFEGGMEKRS--QLLDLDLNLPPP 218

The following BLAST results are available for this feature:

BLAST of CmoCh19G010790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXS8	2.4e-52	55.79	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
O80339	1.1e-49	53.68	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LDE4	7.6e-43	46.64	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9C5I3	1.9e-25	47.73	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9FE67	1.2e-24	78.57	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of CmoCh19G010790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLX1	5.2e-119	100.00	ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HWB0	1.3e-114	97.18	ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3C642	6.8e-103	88.32	Ethylene-responsive transcription factor 3-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BLI0	6.8e-103	88.32	ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KHW7	8.9e-103	88.32	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421660 PE=...	[more]

BLAST of CmoCh19G010790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953046.1	1.1e-118	100.00	ethylene-responsive transcription factor 3-like [Cucurbita moschata]	[more]
XP_023511720.1	5.3e-118	99.53	ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo]	[more]
KAG6572422.1	1.3e-116	99.06	Ethylene-responsive transcription factor 3, partial [Cucurbita argyrosperma subs...	[more]
XP_022969417.1	2.7e-114	97.18	ethylene-responsive transcription factor 3-like [Cucurbita maxima]	[more]
XP_038888524.1	7.2e-107	92.02	ethylene-responsive transcription factor 3-like [Benincasa hispida]	[more]

BLAST of CmoCh19G010790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50640.1	7.8e-51	53.68	ethylene responsive element binding factor 3	[more]
AT3G20310.1	5.4e-44	46.64	ethylene response factor 7	[more]
AT1G28370.1	1.3e-26	47.73	ERF domain protein 11	[more]
AT5G44210.1	8.7e-26	78.57	erf domain protein 9	[more]
AT3G15210.1	9.6e-25	39.37	ethylene responsive element binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 25..36 score: 60.91 coord: 47..63 score: 73.9
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 e-value: 1.2E-37 score: 141.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 24..73 e-value: 6.0E-15 score: 55.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 24..81 score: 23.669914
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..81 e-value: 3.18228E-33 score: 111.98
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 23..83 e-value: 5.9E-29 score: 102.0
None	No IPR available	PANTHER	PTHR31677:SF157	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3	coord: 19..186
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 19..186
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 25..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G010790.1	CmoCh19G010790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity