CmoCh19G009300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G009300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Coiled-coil domain-containing protein 21, putative isoform 2
Location	Cmo_Chr19: 8603339 .. 8604749 (-)
RNA-Seq Expression	CmoCh19G009300
Synteny	CmoCh19G009300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGTTTTCTTAGATTTTTATAAGAAAACCCAAGAAGGAATGCGAAATTTGTAAAACTATAAATAGTTCTTGTTGTAAGATCTTCAGCCACTCATAAGCGCAACCGAATTCTGGCAAATTGGAGTAGGCAGGAGAACGATGAGCTTTTTGGCCGGAAGATTAGCCGCCAAAGAGGCGGCATACTTCATTCAGGAATCCAAACACGCCGTCGGCCGCCTTGCCCAGAAATTTCCGGCGCAGCCACCGCCTTCTTCCCATTCCACGACGGAGGGCGAGTCGCAAGCCGACATTCTCCCTGAGGTCTTAAGGCACTCTCTGCCCTCTACATTCTACAGGGAGCAATCTGCAGACTCTCATGGATCGCTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTGTCTTCAGATTCTCTCAACCCTCTTAGGGCTTTCGTCTCCCTTCCCCAGGTTTCACTCGGCCCCAAAAGGTTCATTTCTCTCCTAATTTTATTCTGTTTCTCCCAATTTGATTTGTTTTGGCTTGGATCATAAATGTCATGTTGAATTCAGGTGGGAATTGCCTCAATCTGGAAACTCAGTATTGGCCTCAACCGCTAATGACTTGCGGACCGACAAGCATACTCCGATCAATCCTGAGAAGTTGAAGGCTGCTGCCGAAGGCCTTGCACATAGTGACCTCCTAAAACAGAACACTTCTCTGTTTCTCTCCCTGTTTCTCATCCTAACTCATTAGACCTTTCGTATCCGTGTAGTTGGAAAGGCATTTGCTGTAGCTACTGCGCTCGTCTTTGGTGGTGCCACCCTAATCTTTGGAATCACCATGTCCAAGCTAGATCTAAACAATGTAAACATGGACAACTCTTGGTGATCTTTGTATATGCACATACATTTCTATTTAACTATGATTTTGACAGGCCAATGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAGGATGAAGATGATCAGAGAGCAACTGGTTCCCTTCAAAGTCTGGGTATGTTGTTATATCATTTATGATTCTCACAGCATTCACCTGTTGCTGGATCTAACCGGATTTTGTTCGAGTTTTAGGCTGATGGCATGTCAAAGAAATGGCATGTGGAAAGAGAGAAAGATATCAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGACTTTGGGTGCCAGAACTCCCAACTGAACTGTACAATTCTTTTCACCTTCTGTGTTCATCTTATATATCTGTAAATAATAGTGTGATATTCAGATCTTCACATATGGAGTGTAGAATGTTACTGCTAGCTAGCTAAGTTATACATAACACCAATGTTGCTATTTATGTCTGAGGTTGAAAATATAGAACAGACTTGTTCTTCATAGTTCGTAATCTAAACCAGCTCCATACTTCCAG

mRNA sequence

ACAGTTTTCTTAGATTTTTATAAGAAAACCCAAGAAGGAATGCGAAATTTGTAAAACTATAAATAGTTCTTGTTGTAAGATCTTCAGCCACTCATAAGCGCAACCGAATTCTGGCAAATTGGAGTAGGCAGGAGAACGATGAGCTTTTTGGCCGGAAGATTAGCCGCCAAAGAGGCGGCATACTTCATTCAGGAATCCAAACACGCCGTCGGCCGCCTTGCCCAGAAATTTCCGGCGCAGCCACCGCCTTCTTCCCATTCCACGACGGAGGGCGAGTCGCAAGCCGACATTCTCCCTGAGGTCTTAAGGCACTCTCTGCCCTCTACATTCTACAGGGAGCAATCTGCAGACTCTCATGGATCGCTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTGTCTTCAGATTCTCTCAACCCTCTTAGGGCTTTCGTCTCCCTTCCCCAGGTTTCACTCGGCCCCAAAAGGTGGGAATTGCCTCAATCTGGAAACTCAGTATTGGCCTCAACCGCTAATGACTTGCGGACCGACAAGCATACTCCGATCAATCCTGAGAAGTTGAAGGCTGCTGCCGAAGGCCTTGCACATATTGGAAAGGCATTTGCTGTAGCTACTGCGCTCGTCTTTGGTGGTGCCACCCTAATCTTTGGAATCACCATGTCCAAGCTAGATCTAAACAATGCCAATGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAGGATGAAGATGATCAGAGAGCAACTGGTTCCCTTCAAAGTCTGGGCTGATGGCATGTCAAAGAAATGGCATGTGGAAAGAGAGAAAGATATCAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGACTTTGGGTGCCAGAACTCCCAACTGAACTGTACAATTCTTTTCACCTTCTGTGTTCATCTTATATATCTGTAAATAATAGTGTGATATTCAGATCTTCACATATGGAGTGTAGAATGTTACTGCTAGCTAGCTAAGTTATACATAACACCAATGTTGCTATTTATGTCTGAGGTTGAAAATATAGAACAGACTTGTTCTTCATAGTTCGTAATCTAAACCAGCTCCATACTTCCAG

Coding sequence (CDS)

ATGAGCTTTTTGGCCGGAAGATTAGCCGCCAAAGAGGCGGCATACTTCATTCAGGAATCCAAACACGCCGTCGGCCGCCTTGCCCAGAAATTTCCGGCGCAGCCACCGCCTTCTTCCCATTCCACGACGGAGGGCGAGTCGCAAGCCGACATTCTCCCTGAGGTCTTAAGGCACTCTCTGCCCTCTACATTCTACAGGGAGCAATCTGCAGACTCTCATGGATCGCTCTCTACTTCGAAATGGGTTCTTCCTTCGAACCCTAATTACCGCTCTGTGTCTTCAGATTCTCTCAACCCTCTTAGGGCTTTCGTCTCCCTTCCCCAGGTTTCACTCGGCCCCAAAAGGTGGGAATTGCCTCAATCTGGAAACTCAGTATTGGCCTCAACCGCTAATGACTTGCGGACCGACAAGCATACTCCGATCAATCCTGAGAAGTTGAAGGCTGCTGCCGAAGGCCTTGCACATATTGGAAAGGCATTTGCTGTAGCTACTGCGCTCGTCTTTGGTGGTGCCACCCTAATCTTTGGAATCACCATGTCCAAGCTAGATCTAAACAATGCCAATGAGATTCAAACAAAAGGAAAAAGCATGATTGAACCAAGGATGAAGATGATCAGAGAGCAACTGGTTCCCTTCAAAGTCTGGGCTGATGGCATGTCAAAGAAATGGCATGTGGAAAGAGAGAAAGATATCAAAGAGAAGCCTCTCATAAAGGAACTATCAAAGACTTTGGGTGCCAGAACTCCCAACTGA

Protein sequence

MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSLPSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKELSKTLGARTPN

Homology

[Close]

BLAST of CmoCh19G009300 vs. ExPASy TrEMBL
Match: A0A6J1GLK0 (uncharacterized protein LOC111455089 OS=Cucurbita moschata OX=3662 GN=LOC111455089 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.1e-135
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ
Sbjct: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL
Sbjct: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240

Query: 241 SKTLGARTPN 251
           SKTLGARTPN
Sbjct: 241 SKTLGARTPN 250

[Close]

BLAST of CmoCh19G009300 vs. ExPASy TrEMBL
Match: A0A6J1I0D6 (uncharacterized protein LOC111468292 OS=Cucurbita maxima OX=3661 GN=LOC111468292 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.3e-131
Identity = 243/250 (97.20%), Postives = 246/250 (98.40%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSS+STT+GESQADILPEVLRHSL
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSNSTTDGESQADILPEVLRHSL 60

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PS  YREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVS GPKRWELPQ
Sbjct: 61  PSKIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSFGPKRWELPQ 120

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKD KEKPLIKEL
Sbjct: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDTKEKPLIKEL 240

Query: 241 SKTLGARTPN 251
           SKTLGA+TPN
Sbjct: 241 SKTLGAKTPN 250

[Close]

BLAST of CmoCh19G009300 vs. ExPASy TrEMBL
Match: A0A1S3C0Z0 (uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.0e-115
Identity = 214/255 (83.92%), Postives = 234/255 (91.76%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRL-----AQKFPAQPPPSSHSTTEGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRL     AQKFPA+ PPSSHS  +GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAQKFPAKSPPSSHSLADGEPQADILPEV 60

Query: 61  LRHSLPSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKR 120
           LRHSLPS  +RE+SA+S GS STSKWVLPS+PNYRSVSSD+LNPLRAF+SLPQV+ GPKR
Sbjct: 61  LRHSLPSKIFREESANSSGSFSTSKWVLPSDPNYRSVSSDALNPLRAFLSLPQVTFGPKR 120

Query: 121 WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180
           WELPQS NS+LASTANDLRTDKHTP+NPEKLKAAAEGLAH+GKAFAVATALVFGGATLIF
Sbjct: 121 WELPQSENSILASTANDLRTDKHTPMNPEKLKAAAEGLAHVGKAFAVATALVFGGATLIF 180

Query: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKP 240
           G TMSKLD+NNA+EIQTKGKSMIEP+M+MIR+Q VPFKVWAD +SKKWHVER+ DIKEKP
Sbjct: 181 GFTMSKLDVNNASEIQTKGKSMIEPKMEMIRQQFVPFKVWADDVSKKWHVERDNDIKEKP 240

Query: 241 LIKELSKTLGARTPN 251
           LIKELSK LGA+TPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of CmoCh19G009300 vs. ExPASy TrEMBL
Match: A0A0A0K240 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 9.1e-115
Identity = 215/255 (84.31%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQ-----KFPAQPPPSSHSTTEGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHAVGRLAQ     KFPAQ PPSSHS   GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAVGRLAQKNTAHKFPAQSPPSSHSLPHGEPQADILPEV 60

Query: 61  LRHSLPSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKR 120
           LRHSLPST +RE+SA+S GS STSKWVLPS+PNYRSVSS+SLNPLR F+SLPQV+ GPKR
Sbjct: 61  LRHSLPSTIFREESANSSGSFSTSKWVLPSDPNYRSVSSNSLNPLRDFLSLPQVTFGPKR 120

Query: 121 WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180
           WELPQS NS+LASTANDLRTDKHTPINPEKLKAAAEGLAH+GKAFA ATALVFGGATLIF
Sbjct: 121 WELPQSENSILASTANDLRTDKHTPINPEKLKAAAEGLAHVGKAFAAATALVFGGATLIF 180

Query: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKP 240
           G T+SKLD+NNA+EIQTKGK MIEP+M+MIR+QLVPFKVWAD MSKKWHVER+ DIKEKP
Sbjct: 181 GFTLSKLDVNNASEIQTKGKGMIEPKMEMIRQQLVPFKVWADDMSKKWHVERDNDIKEKP 240

Query: 241 LIKELSKTLGARTPN 251
           LIKELSK LGA+TPN
Sbjct: 241 LIKELSKILGAKTPN 255

[Close]

BLAST of CmoCh19G009300 vs. ExPASy TrEMBL
Match: A0A6J1C1Z9 (uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007726 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 213/255 (83.53%), Postives = 234/255 (91.76%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRL-----AQKFPAQPPPSSHSTTEGESQADILPEV 60
           MSFLAGRLA KEAAYFIQESKHA+GRL      QKFPAQPPPSSHS  +GE QADILPEV
Sbjct: 1   MSFLAGRLAGKEAAYFIQESKHAIGRLVQKNTTQKFPAQPPPSSHSPADGELQADILPEV 60

Query: 61  LRHSLPSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKR 120
           LRHSLPS  +REQSADS+GSL TSKWVLPS+PN RSVSSD+LNPLRAF++LPQV+ GPKR
Sbjct: 61  LRHSLPSKIFREQSADSNGSLVTSKWVLPSDPNRRSVSSDALNPLRAFLTLPQVTFGPKR 120

Query: 121 WELPQSGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180
           WELPQS NSVLASTANDLR DKHT INPEKLKAAAEGLAH+GKAFA+ATALVFGGATLIF
Sbjct: 121 WELPQSENSVLASTANDLRADKHTTINPEKLKAAAEGLAHVGKAFAIATALVFGGATLIF 180

Query: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKP 240
           G T+SKLDLNN+NEIQTKG+++IEP+M+MIREQLVPFK WA+ MSKKWHVER+KDIKEKP
Sbjct: 181 GFTVSKLDLNNSNEIQTKGRNLIEPKMEMIREQLVPFKTWAEDMSKKWHVERDKDIKEKP 240

Query: 241 LIKELSKTLGARTPN 251
           LIKELSKTLGA+TPN
Sbjct: 241 LIKELSKTLGAKTPN 255

[Close]

BLAST of CmoCh19G009300 vs. NCBI nr
Match: XP_022952389.1 (uncharacterized protein LOC111455089 [Cucurbita moschata])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ
Sbjct: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL
Sbjct: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240

Query: 241 SKTLGARTPN 251
           SKTLGARTPN
Sbjct: 241 SKTLGARTPN 250

[Close]

BLAST of CmoCh19G009300 vs. NCBI nr
Match: KAG6572280.1 (hypothetical protein SDJN03_29008, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 487.6 bits (1254), Expect = 6.2e-134
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL
Sbjct: 75  MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 134

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PST YREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ
Sbjct: 135 PSTIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 194

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 195 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 254

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL
Sbjct: 255 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 314

Query: 241 SKTLGARTPN 251
           SKTLGARTPN
Sbjct: 315 SKTLGARTPN 324

[Close]

BLAST of CmoCh19G009300 vs. NCBI nr
Match: KAG7011896.1 (hypothetical protein SDJN02_26803, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 487.6 bits (1254), Expect = 6.2e-134
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PST YREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ
Sbjct: 61  PSTIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL
Sbjct: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240

Query: 241 SKTLGARTPN 251
           SKTLGARTPN
Sbjct: 241 SKTLGARTPN 250

[Close]

BLAST of CmoCh19G009300 vs. NCBI nr
Match: XP_023554586.1 (uncharacterized protein LOC111811789 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132
Identity = 244/250 (97.60%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTT+GESQAD+LPEVLRHSL
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTDGESQADVLPEVLRHSL 60

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PS  YREQSADSHGSLSTSKW+LPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ
Sbjct: 61  PSKIYREQSADSHGSLSTSKWILPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPL+KEL
Sbjct: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLLKEL 240

Query: 241 SKTLGARTPN 251
           SKTLGARTPN
Sbjct: 241 SKTLGARTPN 250

[Close]

BLAST of CmoCh19G009300 vs. NCBI nr
Match: XP_022969227.1 (uncharacterized protein LOC111468292 [Cucurbita maxima] >XP_022969228.1 uncharacterized protein LOC111468292 [Cucurbita maxima])

HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-130
Identity = 243/250 (97.20%), Postives = 246/250 (98.40%), Query Frame = 0


Query: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSHSTTEGESQADILPEVLRHSL 60
           MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSS+STT+GESQADILPEVLRHSL
Sbjct: 1   MSFLAGRLAAKEAAYFIQESKHAVGRLAQKFPAQPPPSSNSTTDGESQADILPEVLRHSL 60

Query: 61  PSTFYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSLGPKRWELPQ 120
           PS  YREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVS GPKRWELPQ
Sbjct: 61  PSKIYREQSADSHGSLSTSKWVLPSNPNYRSVSSDSLNPLRAFVSLPQVSFGPKRWELPQ 120

Query: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180
           SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS
Sbjct: 121 SGNSVLASTANDLRTDKHTPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIFGITMS 180

Query: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDIKEKPLIKEL 240
           KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKD KEKPLIKEL
Sbjct: 181 KLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVEREKDTKEKPLIKEL 240

Query: 241 SKTLGARTPN 251
           SKTLGA+TPN
Sbjct: 241 SKTLGAKTPN 250

[Close]

BLAST of CmoCh19G009300 vs. TAIR 10
Match: AT1G05060.1 (unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 276.2 bits (705), Expect = 2.6e-74
Identity = 151/255 (59.22%), Postives = 189/255 (74.12%), Query Frame = 0


Query: 1   MSFL-AGRLAAKEAAYFIQESKHAVGRLAQKFPA--QPPPSSHSTTEGESQADILPEVLR 60
           MSFL AGRLA KEAAYF QESKHAV RLA+K PA  +  PSS      E Q D+LPE+LR
Sbjct: 1   MSFLGAGRLAGKEAAYFFQESKHAVNRLAEKSPATGKKLPSS-PPDPPEIQPDVLPEILR 60

Query: 61  HSLPSTFYREQSADSHGSLSTSKWVLPSNPNYR-SVSSDSLNPLRAFVSLPQVSLGPKRW 120
           HSLPS  Y  +  D       SKW L S+PN   S+S D LNPLR +VSLPQV+ G +RW
Sbjct: 61  HSLPSKIY-GRPPDPSSLSQFSKWALESDPNATVSISPDVLNPLRGYVSLPQVTFGRRRW 120

Query: 121 ELPQSGNSVLASTANDLRTDKH-TPINPEKLKAAAEGLAHIGKAFAVATALVFGGATLIF 180
           +LP+S NSVLASTAN+LR D++ TP+NPEKLKAA EGL HIGKAFA AT ++FG ATL+F
Sbjct: 121 DLPESENSVLASTANELRRDRYGTPVNPEKLKAAGEGLQHIGKAFAAATIIIFGSATLVF 180

Query: 181 GITMSKLDLNNANEIQTKGKSMIEPRMKMIREQLVPFKVWADGMSKKWHVERE--KDIKE 240
           G   SKLD+ NA++I+TKGK + +P+++ ++EQ+ P + WA+ MSKKWH+E E    IKE
Sbjct: 181 GTAASKLDMRNADDIRTKGKDLFQPKLESMKEQVEPLRTWAENMSKKWHIENEGGNTIKE 240

Query: 241 KPLIKELSKTLGART 249
           KP++KELSK LG ++
Sbjct: 241 KPILKELSKILGPKS 253

The following BLAST results are available for this feature:

BLAST of CmoCh19G009300 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh19G009300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLK0	6.1e-135	100.00	uncharacterized protein LOC111455089 OS=Cucurbita moschata OX=3662 GN=LOC1114550...	[more]
A0A6J1I0D6	5.3e-131	97.20	uncharacterized protein LOC111468292 OS=Cucurbita maxima OX=3661 GN=LOC111468292...	[more]
A0A1S3C0Z0	7.0e-115	83.92	uncharacterized protein LOC103495622 OS=Cucumis melo OX=3656 GN=LOC103495622 PE=...	[more]
A0A0A0K240	9.1e-115	84.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041920 PE=4 SV=1	[more]
A0A6J1C1Z9	1.2e-114	83.53	uncharacterized protein LOC111007726 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of CmoCh19G009300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952389.1	1.3e-134	100.00	uncharacterized protein LOC111455089 [Cucurbita moschata]	[more]
KAG6572280.1	6.2e-134	99.60	hypothetical protein SDJN03_29008, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011896.1	6.2e-134	99.60	hypothetical protein SDJN02_26803, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023554586.1	2.0e-132	97.60	uncharacterized protein LOC111811789 [Cucurbita pepo subsp. pepo]	[more]
XP_022969227.1	1.1e-130	97.20	uncharacterized protein LOC111468292 [Cucurbita maxima] >XP_022969228.1 uncharac...	[more]

BLAST of CmoCh19G009300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05060.1	2.6e-74	59.22	unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36704	PROTEIN, PUTATIVE-RELATED	coord: 1..249
None	No IPR available	PANTHER	PTHR36704:SF1	PROTEIN, PUTATIVE-RELATED	coord: 1..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G009300.1	CmoCh19G009300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane