CmoCh19G008630 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G008630
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transmembrane emp24 domain-containing protein p24beta2-like
Location	Cmo_Chr19: 8335312 .. 8338815 (+)
RNA-Seq Expression	CmoCh19G008630
Synteny	CmoCh19G008630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAACTGCGCCACCGCTCGTTTTGACCCCTCATCTGATCTCAGATCAAATACCCTTTTAACTTATTACAATTCTCAGATTCTCTTTTCCCTCAATTGCCGGCAACTGTTTGTTCATCCCCTCATCCTCTAAATCTCGAGGTAATTTACAAACCCTTTTGCCTTTTCCTTTCCTTTTTCTTATATTCGGTCATTGCAGATCGTGAAGATTTGACTTCTTTTTCATATGGGTCTTTGATTCTTTGAAGTAATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGCCGGTGTATTGCTGTTGAATTTGAGACAATCAGAAGGGATTAGGTTTGTGATTGACAGAGAAGAATGTTTCTCTCACAATGTTCAGTACGACGGCGATACTGTTCATGTTTCTTTTGTTGTAATCAAGACAGATTCTGGATGGCACTATGGCGAAGATGGCGTTGATCTTGTGGTATCATTTCACTTCCCTTTGCTTTGATTTCCTTCTCATTTATAGAATTTGAAACAGGGCAAGCAAGATTCATGGGGTTTTGTTTCAAGAATGTTTGGAAGTGGTTTCTTGCTGATTCTTGAGCAAGACTTGTCTTAGTATAAGCTATGGTTTGTTTCTCAGTTGTTTTTTTGGGTGTTTTAGATGATTTGACTTGAGTTGGAGGACTATTACTAAAACTAGAATGGGGAGGGATTGATCTTTGTGTAAGAGGCTGTTAGTTTGTAGGTTGTTTCTTTGAACTCCTTATGATGAAGGTTACCTCTTAAGTTCATTGGGTGCTTGAAGACTGATACTAAAACTCGAATGCATAGAGACTTATGTTAGTAGACGAGGTGGTTTAGTTGTTTTAAGTTATTTTTGTGGAGATGCTTTGATATGGAGATGGAGAGACCGAGTGTAACCGCTCAAGCTCATTGCTAGTAGATATTGTCTTCTTTGGGTTTTTCCTTTTGGGATTCCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCATACTTTTATAAATAATGCTTTGTTTTCCTCTCTAACCGATGTACAATCTCACAATCCACCTCCCAATCGATGTGGGACCCCCCAATCCACCCCCCTTTGGGGCCTAGCGTCCTTATTGGCACACCGTCTCGTGTCCATCCAGCTTCGGGGCTTAGCCTCCTCGCTGGCACATTGCCTAGTGTTTGGCTCTGATACCATTTGTAACCGCTCAAGCCAACCGCTAACAAATATGTCCTCTTTGGGATTTCACTTTTGGGCTTCTCCTCAAGGTTTTTATAATGCATCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTTTTCTCCCCAACGGCGGTGGGATCTCACATAGAGACAGAGCGAGACCTTTTTACGATATCTACTTCTTAGTTCTTGGGGTGCTAGAAAAGTCCAACGCTAAAACAAGAACGGGCAGATACTTTTCTTAGTAGGGAAGATGGTTAGTTTTAACTTAGTTCTTGGGGTGTTATACATAGGCCCTGTTTCATCCTTAGAATCGTTAATCGTAGTCATTTGTGTACGATGCGGTCAAAAAGACTTTGGACATATGCATTGAAGTTGAGGCTGTGTATAGAGACTCTAGAGACTATTCCAGTGTTTAATGGTCAACTTAGATTTTGTTTCCTCGATTTTGCTCTTCTTACGGAGTTCTTATATCGGGTTTGATTTGAGACCCTTGTGTTTATATTGTTTTTGCCGGTAGAAATTGCTGCTGATCCAATATTTTTGTTTGAATTTTAGATAAAGGGTCCTTCTGGCGAACATCTTCACGATATCCGTGACAAAGCTAGTGAAAAGCATGAATTTGTTGCTCACAACAAAGGTCTTCATCGATTCTGCTTCACGAACAAGTCCCCATACCACGAAACCATCGACTTTGATGTGCACGTTGGTCACTTTTCATACCACGAGCAGCATGCGAAAGATGGTAAGATGCCATTCCCTGTTTTATCATGTACTGACCTTCCTTCACGAGTTAATATCAATCTCAAAACTGGTGCTTGTGCCTGCAGAGCATTTCAACCCTTTGTTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACCGATCGCCAGGCAATAGGTAATGTTGACGAACATGTCTCAAACGTGAATAATTTCCACGGCATCAACTTAGGAATTTAATTGACTATTCAAAAAGAAGTGGTGAAATCTCACATCAACGGGAGAAGAGAACAAGAGAACGAAACATTCCTTATAAGGATGTGGAAATCTCTCTAGCAGACGCGTTTTAGAACCTTGAGAGAAAGCCTAAAAGGGAAAGTCCAAAGAGGATAATATCTGTTAGCGGTGGGATTGGGCTGTTACAAATGGTATAAGAGCCAGACATCGGGCAGTGTGCCAACAAGGACTCTGGGCCTCCAAGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGATGCGTTTCAAACCTTGAGGGGAAGCCCAAAAAGGAAAAGCTAAAATAGGACAATATCGGTGGGTTAGTAGGCATTATTCAAGTACCAATGATCATGATAGTAGCTTTCTTCTTCATCATGGTTGCTGATACCCTGTTAGACTAGGCTCAATGTGGAGAGGTGCTCATTGTTTAGGCTTTGGATTGGGTAAGAAGACTTTAGATCTAACCCAATTGCTCGAATTGCATTAAGACAATAGATCCAACTCTAACCCAACGTATAGTTCGGGTTGAGTTGATTTAGTTTTTCTTTTGTGCACTCTTAGCTTAGTCCATGGCAGATGGGTGTTGAAGGCAACCAGCCAAAAACCCGTGACGTGTTTCCTGTTTGATCTCGATTCTGGCTGTTGAACAGCTCTGCCGATGGAAATGACGAAAACCCGTGACGTGTTTTGTGGTATGGTTTGATTGCAGTGAATGATGGAATGAGCAAAAGGGCAGTCCACAAGGCAATGTTTGAATCAGCAGCACTGGTAGGGGCCAGTGTCCTCCAAGTCTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTCGGACATCCAGAGTTTAATGACAACCATAGAAAAGCTTTGGACATCTTTTCCTATTTATGGTTCTATAATAAATTTACCCTATAGAGTAACTTGCTAATTGGTTTTTCTTCTCTCTTGTTGCCTTATGCACCTACTTTTCACCGTGCTTGCCTTTTTCGTACCCTTAAGTTATGTTCCGATTCGCAATTTAGAAGTTACTTTTGTGGAAAAAACTGTTCGATAAATATTGAAGGACTTAGGTGCCAAATTTAGAAGTTACTTTTGGTATTCTCCTACTTTCTTTATGTTTATGGGTATGGGTGTTCAAATGACTCGAGAATCTGACCAACCCGGATTACCCTACCTAAACTATAACGGTTGGGTTGGGTTAGTTCTTTTTTAGGTTTGGGC

mRNA sequence

CTCCAACTGCGCCACCGCTCGTTTTGACCCCTCATCTGATCTCAGATCAAATACCCTTTTAACTTATTACAATTCTCAGATTCTCTTTTCCCTCAATTGCCGGCAACTGTTTGTTCATCCCCTCATCCTCTAAATCTCGAGTAATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGCCGGTGTATTGCTGTTGAATTTGAGACAATCAGAAGGGATTAGGTTTGTGATTGACAGAGAAGAATGTTTCTCTCACAATGTTCAGTACGACGGCGATACTGTTCATGTTTCTTTTGTTGTAATCAAGACAGATTCTGGATGGCACTATGGCGAAGATGGCGTTGATCTTGTGATAAAGGGTCCTTCTGGCGAACATCTTCACGATATCCGTGACAAAGCTAGTGAAAAGCATGAATTTGTTGCTCACAACAAAGGTCTTCATCGATTCTGCTTCACGAACAAGTCCCCATACCACGAAACCATCGACTTTGATGTGCACGTTGGTCACTTTTCATACCACGAGCAGCATGCGAAAGATGAGCATTTCAACCCTTTGTTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACCGATCGCCAGGCAATAGTGAATGATGGAATGAGCAAAAGGGCAGTCCACAAGGCAATGTTTGAATCAGCAGCACTGGTAGGGGCCAGTGTCCTCCAAGTCTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTCGGACATCCAGAGTTTAATGACAACCATAGAAAAGCTTTGGACATCTTTTCCTATTTATGGTTCTATAATAAATTTACCCTATAGAGTAACTTGCTAATTGGTTTTTCTTCTCTCTTGTTGCCTTATGCACCTACTTTTCACCGTGCTTGCCTTTTTCGTACCCTTAAGTTATGTTCCGATTCGCAATTTAGAAGTTACTTTTGTGGAAAAAACTGTTCGATAAATATTGAAGGACTTAGGTGCCAAATTTAGAAGTTACTTTTGGTATTCTCCTACTTTCTTTATGTTTATGGGTATGGGTGTTCAAATGACTCGAGAATCTGACCAACCCGGATTACCCTACCTAAACTATAACGGTTGGGTTGGGTTAGTTCTTTTTTAGGTTTGGGC

Coding sequence (CDS)

ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGCCGGTGTATTGCTGTTGAATTTGAGACAATCAGAAGGGATTAGGTTTGTGATTGACAGAGAAGAATGTTTCTCTCACAATGTTCAGTACGACGGCGATACTGTTCATGTTTCTTTTGTTGTAATCAAGACAGATTCTGGATGGCACTATGGCGAAGATGGCGTTGATCTTGTGATAAAGGGTCCTTCTGGCGAACATCTTCACGATATCCGTGACAAAGCTAGTGAAAAGCATGAATTTGTTGCTCACAACAAAGGTCTTCATCGATTCTGCTTCACGAACAAGTCCCCATACCACGAAACCATCGACTTTGATGTGCACGTTGGTCACTTTTCATACCACGAGCAGCATGCGAAAGATGAGCATTTCAACCCTTTGTTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACCGATCGCCAGGCAATAGTGAATGATGGAATGAGCAAAAGGGCAGTCCACAAGGCAATGTTTGAATCAGCAGCACTGGTAGGGGCCAGTGTCCTCCAAGTCTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTCGGACATCCAGAGTTTAA

Protein sequence

MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDSGWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAVHKAMFESAALVGASVLQVYLLQRLFERKLRTSRV

Homology

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BLAST of CmoCh19G008630 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.2e-85
Identity = 149/197 (75.63%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 18  LLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDSGWHYGEDGVDLVIKGPS 77
           LL + + + GIRFVIDREECFSH  +Y+GDT+HVSFVVIK+DS WH+ EDGVDLVI GP+
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHF 137
           GE +HD R++ S KH+FV   KG++RFCFTNKSPYHETIDFDV +GHF+Y++QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAVHKAMFESAALVGASVLQ 197
            PL++QISKLEEALYNIQFEQHWLEAQTDRQAIVN+ MSKRAVHKA+FES AL+GAS LQ
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQ 191

Query: 198 VYLLQRLFERKLRTSRV 215
           VYLL+RLFERKL  SRV
Sbjct: 192 VYLLRRLFERKLGMSRV 208

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BLAST of CmoCh19G008630 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 71/214 (33.18%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MER   +  V +    +LL ++ Q   +   ++ EEC    V Y+GDTV  +FVV+  D 
Sbjct: 1   MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
            W     G+D  +  P+G  +  ++  + +K EF A   G+++FCF N     ET+ F +
Sbjct: 61  FWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYI 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGH       AKDEH +P+  +I++L EAL ++  EQ +L+A+  R    N+   KR +
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
              + E   L  AS LQV  +++LF + +  +RV
Sbjct: 181 FYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

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BLAST of CmoCh19G008630 vs. ExPASy TrEMBL
Match: A0A6J1GLY5 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111455579 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 6.8e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. ExPASy TrEMBL
Match: A0A6J1HZG1 (transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=3661 GN=LOC111468315 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.4e-116
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMR VVMMAFAGVLLLNLRQSEG+RFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 1   MERWAMRRVVMMAFAGVLLLNLRQSEGLRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYG+DGVDLVIKGPSGEHLHD RDKASEKHEF+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGDDGVDLVIKGPSGEHLHDFRDKASEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. ExPASy TrEMBL
Match: A0A5D3D6W7 (Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00310 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.0e-111
Identity = 199/214 (92.99%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMR VVMMAF GVLLLNLR+SEGIRFVIDREECFSH VQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRFVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHQVQYEGDTVHVSFVVIKADS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYG+DGVDLVIKGP+GEHLHD RDK SEKHEF+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPTGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. ExPASy TrEMBL
Match: A0A6J1EKQ0 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111435219 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.4e-110
Identity = 196/214 (91.59%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMRCVVMMAF GVLLLNLR+SEGIRFVIDREECFSHNVQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRCVVMMAFVGVLLLNLRRSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYG+DGVDLVIKGP+GEHLHD+RDK SEKHEFV HNKGLHRFCFTNKSPYHETIDFD+
Sbjct: 61  AWHYGDDGVDLVIKGPNGEHLHDVRDKTSEKHEFVVHNKGLHRFCFTNKSPYHETIDFDM 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSY EQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQ IVN+ MSKRA+
Sbjct: 121 HVGHFSYQEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQEIVNEAMSKRAM 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. ExPASy TrEMBL
Match: A0A0A0K541 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.8e-110
Identity = 196/214 (91.59%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMR V+MMAF GVLLL+LR+SEGIRFVIDREECFSH+VQY+GDTVHVSFVVIK DS
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
            WHYG+DGVDLVIKGPSGEHLHD RDK SEKHEF+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPL+DQISKLEEALYNIQFEQHWLEAQTDRQAIVN+GM KRA+
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. NCBI nr
Match: XP_022953060.1 (transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita moschata] >XP_022953061.1 transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita moschata])

HSP 1 Score: 436.4 bits (1121), Expect = 1.4e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. NCBI nr
Match: KAG6572216.1 (Transmembrane emp24 domain-containing protein p24beta2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.1e-118
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 445 MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 504

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYGEDGVDLVIKGPSGEHLHD RDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 505 GWHYGEDGVDLVIKGPSGEHLHDFRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 564

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 565 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 624

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 625 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 658

[Close]

BLAST of CmoCh19G008630 vs. NCBI nr
Match: KAG7011855.1 (Transmembrane emp24 domain-containing protein p24beta2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434.9 bits (1117), Expect = 4.1e-118
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYGEDGVDLVIKGPSGEHLHD RDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDFRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. NCBI nr
Match: XP_023554617.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.7 bits (1114), Expect = 9.1e-118
Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMRCVVMMAFAGVLLLNLR+SEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 1   MERWAMRCVVMMAFAGVLLLNLRESEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYGEDGVDLVIKGPSGEHLHD RDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGEDGVDLVIKGPSGEHLHDFRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. NCBI nr
Match: XP_022969260.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucurbita maxima] >XP_022969261.1 transmembrane emp24 domain-containing protein p24beta2 [Cucurbita maxima])

HSP 1 Score: 427.9 bits (1099), Expect = 5.0e-116
Identity = 209/214 (97.66%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MERWAMR VVMMAFAGVLLLNLRQSEG+RFVIDREECFSHNVQYDGDTVHVSFVVIKTDS
Sbjct: 1   MERWAMRRVVMMAFAGVLLLNLRQSEGLRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
           GWHYG+DGVDLVIKGPSGEHLHD RDKASEKHEF+AHNKGLHRFCFTNKSPYHETIDFDV
Sbjct: 61  GWHYGDDGVDLVIKGPSGEHLHDFRDKASEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
           HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 214

[Close]

BLAST of CmoCh19G008630 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 315.1 bits (806), Expect = 4.4e-86
Identity = 149/197 (75.63%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 18  LLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDSGWHYGEDGVDLVIKGPS 77
           LL + + + GIRFVIDREECFSH  +Y+GDT+HVSFVVIK+DS WH+ EDGVDLVI GP+
Sbjct: 12  LLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPT 71

Query: 78  GEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHF 137
           GE +HD R++ S KH+FV   KG++RFCFTNKSPYHETIDFDV +GHF+Y++QHAKDEHF
Sbjct: 72  GEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHF 131

Query: 138 NPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAVHKAMFESAALVGASVLQ 197
            PL++QISKLEEALYNIQFEQHWLEAQTDRQAIVN+ MSKRAVHKA+FES AL+GAS LQ
Sbjct: 132 TPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQ 191

Query: 198 VYLLQRLFERKLRTSRV 215
           VYLL+RLFERKL  SRV
Sbjct: 192 VYLLRRLFERKLGMSRV 208

[Close]

BLAST of CmoCh19G008630 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 71/214 (33.18%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 1   MERWAMRCVVMMAFAGVLLLNLRQSEGIRFVIDREECFSHNVQYDGDTVHVSFVVIKTDS 60
           MER   +  V +    +LL ++ Q   +   ++ EEC    V Y+GDTV  +FVV+  D 
Sbjct: 1   MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60

Query: 61  GWHYGEDGVDLVIKGPSGEHLHDIRDKASEKHEFVAHNKGLHRFCFTNKSPYHETIDFDV 120
            W     G+D  +  P+G  +  ++  + +K EF A   G+++FCF N     ET+ F +
Sbjct: 61  FWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYI 120

Query: 121 HVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSKRAV 180
           HVGH       AKDEH +P+  +I++L EAL ++  EQ +L+A+  R    N+   KR +
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180

Query: 181 HKAMFESAALVGASVLQVYLLQRLFERKLRTSRV 215
              + E   L  AS LQV  +++LF + +  +RV
Sbjct: 181 FYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

The following BLAST results are available for this feature:

BLAST of CmoCh19G008630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7M9	6.2e-85	75.63	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
Q9LIL4	2.4e-28	33.18	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]

BLAST of CmoCh19G008630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLY5	6.8e-119	100.00	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]
A0A6J1HZG1	2.4e-116	97.66	transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=36...	[more]
A0A5D3D6W7	4.0e-111	92.99	Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1EKQ0	4.4e-110	91.59	transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschat...	[more]
A0A0A0K541	9.8e-110	91.59	GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 S...	[more]

BLAST of CmoCh19G008630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953060.1	1.4e-118	100.00	transmembrane emp24 domain-containing protein p24beta2-like [Cucurbita moschata]...	[more]
KAG6572216.1	4.1e-118	99.53	Transmembrane emp24 domain-containing protein p24beta2, partial [Cucurbita argyr...	[more]
KAG7011855.1	4.1e-118	99.53	Transmembrane emp24 domain-containing protein p24beta2 [Cucurbita argyrosperma s...	[more]
XP_023554617.1	9.1e-118	99.07	transmembrane emp24 domain-containing protein p24beta2 [Cucurbita pepo subsp. pe...	[more]
XP_022969260.1	5.0e-116	97.66	transmembrane emp24 domain-containing protein p24beta2 [Cucurbita maxima] >XP_02...	[more]

BLAST of CmoCh19G008630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07680.1	4.4e-86	75.63	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G22845.1	1.7e-29	33.18	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 27..206 e-value: 1.6E-38 score: 144.0
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 34..206 e-value: 1.1E-31 score: 110.2
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 35..122 score: 14.628772
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 11..210
None	No IPR available	PANTHER	PTHR22811:SF167	TMP21-RELATED PROTEIN-RELATED	coord: 11..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G008630.1	CmoCh19G008630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane