CmoCh19G008540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G008540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RRP15-like protein
Location	Cmo_Chr19: 8282707 .. 8286458 (-)
RNA-Seq Expression	CmoCh19G008540
Synteny	CmoCh19G008540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGACGACTGGAATGCAGTAGAATTGGTGAGAGGTGCGAAGAGAAGGAAAAAGATGGGTTCCAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGGAACAAAGTTAAGGTTCATAGGAAGATGAAGAAACTCTTCCAAAAGCGAGCATGAGTATAATTTAGATGATAACGATGATGACGAGAAAGCTCCGGTGATTGGAGACGAAACCAAAACTTCAATGCTCAGTCATGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAGGGAAGGATATCAATGCAGATCTCGAGCCATCCGAAGACGATGAAAATGGTGATATTCAACCAGGTATAGCTAAGTTTACAGAAGGTTGTAGAGCATTCCGGGCTGCATTAAGGAGTATCCTCAAGAAGAGCATATCTGATGAAACTTTGGTAGTTTATATCTTATATTGGGTCGGAATTATTTTCAATAGTTGAAGTAATAAGAAAAGTAATTGTGCCATGTTTGTGTTGCAGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGAGGAAAGTTAAAGGAGAGGCCAAGAAAGAGAAACAAACGGTATTTCCTTTTAAATAAAAGATTTTGCTTGTTTATAATTTAGCTTTTGCTTAGAATTTGTTGATTGCAAACATGGGATCTCACAATCCACCCCCTTTCGGGGTCCAGCGTCCTTGTTGGCCTTCGTTCTCTTCTTCAATCGATGTGGGACCCTCCAATCCACCTCCTTCGGGGCCAGCATTTTTGCTGGCACACCGCCTCGTGTCCACACCCTTCTGGGTTCAGCCTCCTCATTGGCACATCGCTCGGTGTCTAACTCTGATACCATTTGTAACGGCCAAAGCCTACCGCTAGCCGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGTTTCCCCTCAAGGCTTTTAAAACGCGTCTGCTAGGGAGAGGTTTTCACACTTCTATAAAGAATGCTTTATTTTATTCTCCAATCGATGTGGGTCTCACACCACACTTCTATAAAGAATGCTTTATTTTCTTCTCCCATCGATGTGGGTCTCACAGCAAATGTTTGAATAGGGTAGGTGGGAGAAAAAGGCCATGTGAAACCTGCTACTTACTTGGATTCTAATGAAAAGTTTCTTATTGGCGTTGCTACTAAAGGAGGTAGCCTAGTTCGATTTTACTTTGAGTTGGGAAAGGTTTTCTTTTTTATTTCAACGGTGATTATTACATCTCTCATCATACTAACACAGTAATCTCCATGTGTATTGCTGCTTGTCGATTGTCAGTTGTCAAGTTGTTTAACGCTGTAAGTAGCCAAATTTTGATATCAGACAACTTTTTTGTCACATCCTCATCTATGTTGCATTCATCGCTGAATTCCATTATTTTGAATATGATACAGGTCAATAAGGCACAACATGCTCAGAAAGGTTTGAATCCTTCGAGAGCTAAAGATGTTGAAGGTATTAGGCCTTTTACGTAACTTTGATCTCAGAAGTTAACAATTTCACTTTCTTTTATCTTGCCTTGTGAATATGCTGTCCCTAAATTAGCATTCAATTAATTTTTGTGCTTCTGCATGTTGCATTATATTCAATCTTGTAGCTTAATTTTCCTATTCCTATGATGTATGCCAACTTATATTCTGTTTTGTGGTTTCTGCATTGTCCTTGTTGAAAACCCTTTGAAAACGTTATGTAATAGCTCAAACCCACCGCTAGCAGACATTATCTTTTTTGGGTTTTTCTTTTCGAGCTTCCTCTCAAGGTTTTAAAACGTGTTTGGTAGGGAGAGGTTTCCACGTCCTTATAAGGAATGTTCGTTCCCCTCTGCAACCGATGCGGGATCTCACATGTTAAACTCCTAATTAACGAATCATTGGCAACTTTACTAATTTGCTGACTTTGATTGGGAATCTGTGTGGTTGAAGTAGCCAGTGATTTAAAAGGCATGTGTCTCGAATTTATTGACCTATTAGTCTCTCGCGCGTACTTCTAGTCAACTAATGCTTTCCCCTGTGGCTTATATAGGACTACTAATGTTTGGCGAACCCTGTTAGACCCGCTTTTGTTTGCATATTAAGACGCTTATTCTTCCGTTCTTGACTTGTGATTATGTGAGTAGCTACTCAATATTGAAGGTGAACGATATCCTTAACTTTTTCGTTCTATCCCGTCTCATACGCAATAAATAAACGCAGGAAAGAAGCTTTCTTTTCTGTGTTGGGCAAGACAATTTTGTCAGCAACAAACAGTAATGCAAAGGTTGGTTATTTTCTGCTATAGAATTTGATAAATTTATTGGAGCTTTTAACCAATTGTTGTTAAATTCTTTATTAATTCTCTTACAAGCAATGATACTTTCGACAAACACCTGAGGAGGCGTACGGACTTGTGGCTTTTTTCATTAGCATCCTCATCTTCATTATCGTGTTTATGTGCAGTGGAATGGGGACTGGTAGGGGGATGTCCATGGGGTCGGGCAGGGGTCGGGATGGTTTTCATGTCCTCACGAAATTTCCTATAAAATTTTATGAAAAAAGGTTGGGATGGGGAATGGGGACTAGTCCATGCAGGGGCGTGGAAAATGGACAGCTCTAGGGGATGGGGTGCATGTTAGTTAAGAGAGTGAAGCTCAGGTCAAGTCACGATCATATATTATCTGTTTCTTCATGTCCATAATGAAACTCAAATGGCCATCTTTATGTTGAACAGTTAGACACATCAGGTGGTGCAGTGGACGCCGAAGGACCCGCTTGGGCTCCATTGCGTGATAATTATATGCTGACCAATTCCAAGTTAAAAGATTGGGATAAGATGCCAGTAAGATAAGATTTACTTTCAAAGCCTAATGTCTGTCGTGCCTGTTTCTGTCGGTTTCGATTTTCATATCGTCTGATCAATTATACTTCAATGATGGCCAAGGACAGTGGGAGGATGTTAGAAGACAGTAGCTCAGATGAGGATTGATAGATGTTGACACAGCTCGGTTCTATTTTGGTTTGTTAGTTTCAAACTGCAAAGGAGTACCTCAATCCATTCCCCTCATATGATGTTGGTGGTACGTCAATATGTTGTCGATTCATCTGTGCATATATCGTCGATATTGTAGGATTTTCGAGCAAATTGCTTGAAAGATGAACATATTGGTCTTGATTTGTATGTTTTGCACAAATAGTCAAAACTCGAAAGAAATTTGTTCTAAACCTTCAACACATTGTGTTTGTAAAGTGACTATGATCATACGAGAGGTTGTTAGGTGTTTGATTCATTCGAGCGGTTGATTTCAAACGAATGCAAGAGATTTAGGATACGTTATACTCTCTCAACTCATCTTTTATTCAATTTGTCTCCCAAAGAAAGAAGTGAATTCCATATCAAAAACATGCGTATAGCAAACGTAGTAAACCAAGCCAAACATGAAAACGATAGACGCTTGATTTGGTTTATATGCCTTCTGGACTTTCCAACGCCATCGCCACATCCTGCACGAAGAACGTACGAGCTCTTGACAGAATAAAAACTATCAATATCTCTGTTAAGTAATGGGACTACAAAATTGGTTAAATACACTAGTAGTACCAATCTTTGCAACATATACATTCATCGTCGTGTTCCGGTCGGTAACGAAATTTGAAGTTACAACAGTTCAATATTGTCCCAAATATAATTGTTCAGGCTGCATATTTCTACCTCATCAAATGAACAGATGA

mRNA sequence

ATGGTTGACGACTGGAATGCAGTAGAATTGGTGAGAGGTGCGAAGAGAAGGAAAAAGATGGGTTCCAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGGAACAAAGTTAAGAAAGCTCCGGTGATTGGAGACGAAACCAAAACTTCAATGCTCAGTCATGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAGGGAAGGATATCAATGCAGATCTCGAGCCATCCGAAGACGATGAAAATGGTGATATTCAACCAGGTATAGCTAAGTTTACAGAAGGTTGTAGAGCATTCCGGGCTGCATTAAGGAGTATCCTCAAGAAGAGCATATCTGATGAAACTTTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGAGGAAAGTTAAAGGAGAGGCCAAGAAAGAGAAACAAACGGTGGGAGAAAAAGGCCATGTGAAACCTGCTACTTACTTGGATTCTAATGAAAAGTTTCTTATTGGCGTTGCTACTAAAGGAGTAATCTCCATGTGTATTGCTGCTTGTCGATTGTCAGTTGTCAAGTTGTTTAACGCTGTCAATAAGGCACAACATGCTCAGAAAGGTTTGAATCCTTCGAGAGCTAAAGATGTTGAAGGACTACTAATGAAAGAAGCTTTCTTTTCTGTGTTGGGCAAGACAATTTTGTCAGCAACAAACAGTAATGCAAAGTTAGACACATCAGGTGGTGCAGTGGACGCCGAAGGACCCGCTTGGGCTCCATTGCGTGATAATTATATGCTGACCAATTCCAAGTTAAAAGATTGGGATAAGATGCCATGGGAGGATTTTCAAACTGCAAAGGAGTACCTCAATCCATTCCCCTCATATGATGTTGGTGTACCAATCTTTGCAACATATACATTCATCGTCGTGTTCCGGTCGGTAACGAAATTTGAAGTTACAACAGTTCAATATTGTCCCAAATATAATTGTTCAGGCTGCATATTTCTACCTCATCAAATGAACAGATGA

Coding sequence (CDS)

ATGGTTGACGACTGGAATGCAGTAGAATTGGTGAGAGGTGCGAAGAGAAGGAAAAAGATGGGTTCCAGGAACAAGAAAAGACCGAGGATGATGGGTGGAAGTGGGAACAAAGTTAAGAAAGCTCCGGTGATTGGAGACGAAACCAAAACTTCAATGCTCAGTCATGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAGGGAAGGATATCAATGCAGATCTCGAGCCATCCGAAGACGATGAAAATGGTGATATTCAACCAGGTATAGCTAAGTTTACAGAAGGTTGTAGAGCATTCCGGGCTGCATTAAGGAGTATCCTCAAGAAGAGCATATCTGATGAAACTTTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGAGGAAAGTTAAAGGAGAGGCCAAGAAAGAGAAACAAACGGTGGGAGAAAAAGGCCATGTGAAACCTGCTACTTACTTGGATTCTAATGAAAAGTTTCTTATTGGCGTTGCTACTAAAGGAGTAATCTCCATGTGTATTGCTGCTTGTCGATTGTCAGTTGTCAAGTTGTTTAACGCTGTCAATAAGGCACAACATGCTCAGAAAGGTTTGAATCCTTCGAGAGCTAAAGATGTTGAAGGACTACTAATGAAAGAAGCTTTCTTTTCTGTGTTGGGCAAGACAATTTTGTCAGCAACAAACAGTAATGCAAAGTTAGACACATCAGGTGGTGCAGTGGACGCCGAAGGACCCGCTTGGGCTCCATTGCGTGATAATTATATGCTGACCAATTCCAAGTTAAAAGATTGGGATAAGATGCCATGGGAGGATTTTCAAACTGCAAAGGAGTACCTCAATCCATTCCCCTCATATGATGTTGGTGTACCAATCTTTGCAACATATACATTCATCGTCGTGTTCCGGTCGGTAACGAAATTTGAAGTTACAACAGTTCAATATTGTCCCAAATATAATTGTTCAGGCTGCATATTTCTACCTCATCAAATGAACAGATGA

Protein sequence

MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVKKAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSRAKDVEGLLMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKLKDWDKMPWEDFQTAKEYLNPFPSYDVGVPIFATYTFIVVFRSVTKFEVTTVQYCPKYNCSGCIFLPHQMNR

Homology

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BLAST of CmoCh19G008540 vs. ExPASy Swiss-Prot
Match: Q3T062 (RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.4e-07
Identity = 88/278 (31.65%), Postives = 126/278 (45.32%), Query Frame = 0


Query: 22  SRNKKRPRMMGGSGNKVKKAPVIGDETKTSMLSHEEVGD-----EEFSEGEEEGKDINAD 81
           S  KKR +M+  S      A  + D+ K +  +   +G      + FS G+E  +  N D
Sbjct: 19  SLRKKRMKMVVAS-----VASELEDKDKDASDNEGSLGSCGLEKDHFSSGDEAVEADNED 78

Query: 82  -LEPSEDDENGDIQPGIAKFTEGCRA-FRAALRSILKKSISDETLGPILSANKKL--VAE 141
             EP EDD +       A+ T G  A +  A+  IL K I  E+   IL  NK+L    E
Sbjct: 79  EAEPREDDND-----SAAEATAGANAGWADAMARILSKKI-PESKPTILVRNKELEKEKE 138

Query: 142 KLAEEEAERKVKGEAKKEKQTVGEKGHVKPATYLD-SNEKFLIGVATKGVISMCIAACRL 201
           KL +E  E++ + + K+E + +     VKP    D   E+ L  +AT+G           
Sbjct: 139 KLKQERLEKRKQLDKKREWEMM---CRVKPDVVKDKETERNLQRIATRG----------- 198

Query: 202 SVVKLFNAVNKAQ-------HAQKGLNPSRAKDVEGLLMKEAFFSVLGKTILSATNSNAK 261
            VV+LFNAV K Q           G    RAK +  +  K+ F SVL     SA+  N+ 
Sbjct: 199 -VVQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVSKKD-FISVLRGMDGSASEKNSA 258

Query: 262 LDTSGG----AVDAEGPAWAPLRDNYMLTNSKLKDWDK 279
              S      A   EGP W  LRD++M+  + +KDWDK
Sbjct: 259 GKNSKAKQTEAKSEEGPGWTILRDDFMM-GASMKDWDK 268

[Close]

BLAST of CmoCh19G008540 vs. ExPASy TrEMBL
Match: A0A6J1GMJ1 (LOW QUALITY PROTEIN: RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455323 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 7.1e-134
Identity = 267/310 (86.13%), Postives = 268/310 (86.45%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK                     
Sbjct: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVKVHRKMKKLFQKRAXEYNLDDN 60

Query: 61  ----KAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF 120
               KAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF
Sbjct: 61  DDDEKAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF 120

Query: 121 TEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVG 180
           TEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVG
Sbjct: 121 TEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVG 180

Query: 181 EKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSRA 240
           EKGHVKPATYLDSNEKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPSRA
Sbjct: 181 EKGHVKPATYLDSNEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPSRA 240

Query: 241 KDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKL 284
           KDVE +    KEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKL
Sbjct: 241 KDVEAINKRRKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKL 298

[Close]

BLAST of CmoCh19G008540 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 6.0e-109
Identity = 232/318 (72.96%), Postives = 246/318 (77.36%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NAVELVRGAKRRKKMGSRN KRPRMMGGSGNKVK                     
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP +  E+K  + SH EEVGDEEFSEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA D EGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 6.0e-109
Identity = 231/318 (72.64%), Postives = 247/318 (77.67%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NA+ELVRGAKRRKKMGSRNKKRPRMMGGSGNK K                     
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP + +E+K  + SH EEVGDEE SEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA DAEGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. ExPASy TrEMBL
Match: A0A5D3BX18 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00070 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108
Identity = 230/318 (72.33%), Postives = 247/318 (77.67%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NA+ELVRGAKRRKKMGSRNKKRPR+MGGSGNK K                     
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP + +E+K  + SH EEVGDEE SEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA DAEGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. ExPASy TrEMBL
Match: A0A5A7UXA3 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001920 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 5.8e-104
Identity = 223/318 (70.13%), Postives = 241/318 (75.79%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NA+ELVRGAKRRKKMGSRNKKRPR+MGGSGNK K                     
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP + +E+K  + SH EEVGDEE SEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG                 + VNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG----------------GSIVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA DAEGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. NCBI nr
Match: XP_022952710.1 (LOW QUALITY PROTEIN: RRP15-like protein [Cucurbita moschata])

HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-133
Identity = 267/310 (86.13%), Postives = 268/310 (86.45%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK                     
Sbjct: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVKVHRKMKKLFQKRAXEYNLDDN 60

Query: 61  ----KAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF 120
               KAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF
Sbjct: 61  DDDEKAPVIGDETKTSMLSHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF 120

Query: 121 TEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVG 180
           TEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVG
Sbjct: 121 TEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVG 180

Query: 181 EKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSRA 240
           EKGHVKPATYLDSNEKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPSRA
Sbjct: 181 EKGHVKPATYLDSNEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPSRA 240

Query: 241 KDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKL 284
           KDVE +    KEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKL
Sbjct: 241 KDVEAINKRRKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKL 298

[Close]

BLAST of CmoCh19G008540 vs. NCBI nr
Match: XP_038888922.1 (RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benincasa hispida])

HSP 1 Score: 408.3 bits (1048), Expect = 6.6e-110
Identity = 230/308 (74.68%), Postives = 243/308 (78.90%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NAVELVRGAKRRKKMGSRN KRPRMMGGSGNKVK                     
Sbjct: 1   MADVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSEDD 60

Query: 61  ----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAK 120
               KAP++ +E K  + SH EEVGDEEFSEGE+EGKD+NAD+E SEDDENG+IQPGI K
Sbjct: 61  DNDEKAPMVENERKVLVCSHAEEVGDEEFSEGEDEGKDVNADVELSEDDENGEIQPGITK 120

Query: 121 FTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTV 180
           F EGCRAFRAA RSILKKSISDETLGPILSANKKL+ EKLAEEEAERKVKG AKKEKQ V
Sbjct: 121 FAEGCRAFRAAFRSILKKSISDETLGPILSANKKLIVEKLAEEEAERKVKGLAKKEKQLV 180

Query: 181 GEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSR 240
           GEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPSR
Sbjct: 181 GEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPSR 240

Query: 241 AKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSK 281
            KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA DAEGPAWAPLRDNYMLTNSK
Sbjct: 241 TKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSK 296

[Close]

BLAST of CmoCh19G008540 vs. NCBI nr
Match: XP_008462030.1 (PREDICTED: RRP15-like protein [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-108
Identity = 231/318 (72.64%), Postives = 247/318 (77.67%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NA+ELVRGAKRRKKMGSRNKKRPRMMGGSGNK K                     
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP + +E+K  + SH EEVGDEE SEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA DAEGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. NCBI nr
Match: XP_004144556.1 (RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis sativus] >KGN43394.1 hypothetical protein Csa_020346 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-108
Identity = 232/318 (72.96%), Postives = 246/318 (77.36%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NAVELVRGAKRRKKMGSRN KRPRMMGGSGNKVK                     
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP +  E+K  + SH EEVGDEEFSEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA D EGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. NCBI nr
Match: TYK03372.1 (RRP15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 402.5 bits (1033), Expect = 3.6e-108
Identity = 230/318 (72.33%), Postives = 247/318 (77.67%), Query Frame = 0


Query: 1   MVDDWNAVELVRGAKRRKKMGSRNKKRPRMMGGSGNKVK--------------------- 60
           M D  NA+ELVRGAKRRKKMGSRNKKRPR+MGGSGNK K                     
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRIMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  -----KAPVIGDETKTSMLSH-EEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIA 120
                KAP + +E+K  + SH EEVGDEE SEGEEE KD+NAD+E SEDDENG+IQPGI 
Sbjct: 61  GNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAALRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQT 180
           KFTEGCRAFRAA  SILKK+ISDETLGPILSANKKLVAEKLAEEEAERKVKGEA+K KQ 
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSNEKFLIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPS 240
           VGEKGHVKPATYLDS+EKFLIGVATKG            VVKLFNAVNKAQHAQKGLNPS
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKG------------VVKLFNAVNKAQHAQKGLNPS 240

Query: 241 RAKDVEGL--LMKEAFFSVLGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNS 290
           R KD + +    KEAFFS LGK  LSATNSNAKL+TSGGA DAEGPAWAPLRDNYMLTNS
Sbjct: 241 RTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNS 300

[Close]

BLAST of CmoCh19G008540 vs. TAIR 10
Match: AT5G48240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 215.7 bits (548), Expect = 5.8e-56
Identity = 123/228 (53.95%), Postives = 154/228 (67.54%), Query Frame = 0


Query: 54  SHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF-TEGCRAFRAALRSILKK 113
           ++EE+G+E+  E              S+ +++G+I+ GI KF T+GC AF+ A ++I+KK
Sbjct: 95  NYEEIGEEDNDEN-------------SDGEDHGEIESGITKFATDGCNAFKIAFKAIMKK 154

Query: 114 SISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVGEKGHVKPATYLDSNEKF 173
           +  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K K  + EKGHVKP +YLDS+EK 
Sbjct: 155 TKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPGSYLDSHEKI 214

Query: 174 LIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSRAKDVEGL--LMKEAFFSV 233
           LIGVATKG            VVKLFNAVNKAQHAQKGLNPSR+KD + L    KEAF S 
Sbjct: 215 LIGVATKG------------VVKLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSE 274

Query: 234 LGKTILSATNSNAKLDTSGGAVDAEGPAWAPLRDNYMLTNSKLKDWDK 279
           LGKT         K DT     + E P WAPLRDNYML N KLKDWDK
Sbjct: 275 LGKT---------KTDTKAHKSEDEAPVWAPLRDNYMLANPKLKDWDK 288

[Close]

BLAST of CmoCh19G008540 vs. TAIR 10
Match: AT5G48240.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 5.7e-51
Identity = 124/266 (46.62%), Postives = 158/266 (59.40%), Query Frame = 0


Query: 54  SHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF-TEGCRAFRAALRSILKK 113
           ++EE+G+E+  E              S+ +++G+I+ GI KF T+GC AF+ A ++I+KK
Sbjct: 95  NYEEIGEEDNDEN-------------SDGEDHGEIESGITKFATDGCNAFKIAFKAIMKK 154

Query: 114 SISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVGEKGHVKPATYLDSNEKF 173
           +  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K K  + EKGHVKP +YLDS+EK 
Sbjct: 155 TKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPGSYLDSHEKI 214

Query: 174 LIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSRAKDVEGL--LMKEAFFSV 233
           LIGVATKG            VVKLFNAVNKAQHAQKGLNPSR+KD + L    KEAF S 
Sbjct: 215 LIGVATKG------------VVKLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSE 274

Query: 234 LGKT------------------------------ILSATN--------SNAKLDTSGGAV 279
           LGKT                              ++S +         S  K   S    
Sbjct: 275 LGKTKTDTKPFDARRNKLVFCLDLAPIESHEKNHLMSESKLVFCLELASIEKGSPSAHKS 334

[Close]

BLAST of CmoCh19G008540 vs. TAIR 10
Match: AT5G48240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-43
Identity = 100/184 (54.35%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 54  SHEEVGDEEFSEGEEEGKDINADLEPSEDDENGDIQPGIAKF-TEGCRAFRAALRSILKK 113
           ++EE+G+E+  E              S+ +++G+I+ GI KF T+GC AF+ A ++I+KK
Sbjct: 95  NYEEIGEEDNDEN-------------SDGEDHGEIESGITKFATDGCNAFKIAFKAIMKK 154

Query: 114 SISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKQTVGEKGHVKPATYLDSNEKF 173
           +  D+TLGP+LSA+K L+ EKLAE+EAE+K KG+A+K K  + EKGHVKP +YLDS+EK 
Sbjct: 155 TKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPGSYLDSHEKI 214

Query: 174 LIGVATKGVISMCIAACRLSVVKLFNAVNKAQHAQKGLNPSRAKDVEGL--LMKEAFFSV 233
           LIGVATKG            VVKLFNAVNKAQHAQKGLNPSR+KD + L    KEAF S 
Sbjct: 215 LIGVATKG------------VVKLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSE 253

Query: 234 LGKT 235
           LGKT
Sbjct: 275 LGKT 253

The following BLAST results are available for this feature:

BLAST of CmoCh19G008540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T062	6.4e-07	31.65	RRP15-like protein OS=Bos taurus OX=9913 GN=RRP15 PE=2 SV=1	[more]

BLAST of CmoCh19G008540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMJ1	7.1e-134	86.13	LOW QUALITY PROTEIN: RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0K320	6.0e-109	72.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1	[more]
A0A1S3CFX9	6.0e-109	72.64	RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1	[more]
A0A5D3BX18	1.7e-108	72.33	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663...	[more]
A0A5A7UXA3	5.8e-104	70.13	RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0...	[more]

BLAST of CmoCh19G008540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952710.1	1.5e-133	86.13	LOW QUALITY PROTEIN: RRP15-like protein [Cucurbita moschata]	[more]
XP_038888922.1	6.6e-110	74.68	RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benin...	[more]
XP_008462030.1	1.2e-108	72.64	PREDICTED: RRP15-like protein [Cucumis melo]	[more]
XP_004144556.1	1.2e-108	72.96	RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis...	[more]
TYK03372.1	3.6e-108	72.33	RRP15-like protein [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh19G008540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48240.1	5.8e-56	53.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.3	5.7e-51	46.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G48240.2	2.5e-43	54.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 102..231 e-value: 1.4E-11 score: 44.9
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	RRP15-LIKE PROTEIN	coord: 32..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G008540.1	CmoCh19G008540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0030687	preribosome, large subunit precursor