CmoCh19G005070 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAACTTTGTTTGCATTGTTTGGTTTCTGAGAAAACGTCAGGACAGGACGTGGAAAGTATGAGCTATGCTATCCTTTCTACGGTCCCAAATTTGCTTCGTTTTTGTGTTTGTAATTGTTTCTTGTAGAGACTGGCCTTCACTGCGTTAATTTCTGATTTGAAATAGTCTTCTTAACTTCTTGAAGTTTAGGAATTACTCTGTAGGTTGAAAGAAAGGGGAAATTTCCTGAAATTTTTTTTAGCTTGATCACCAATGTAGTTTGTCTTTCAATTCATGACCATGATATCATATATAATGTCAGCGCATACTTGTTTCATCTAGCGTTGTTACGAAAGGCTGATATATACTTCATTTACGCAAGCCTTCTCAATCCTCAGCATTCATAGATGTCATAAACCTAGTGAGTTACCAGCTCATTTTTACGCACTCTTTTCTATTTCAGATTTGAGAAAGTTAAGTTCCTTTAGGTACGGGTACGAAAATGTGCTTTTGTTTATAGGCAAGGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAAGAATTTAAAGCTGCAGTATCTGCTGCAATGCAAGCTTTTCCTGCTTGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGCTCAAGCTTCAAGAACTCGTTAGGCGAGATATCGTAAGTTCGTTTTTCAGTAAAAGGAATATTCCAAATTCACTTCAAAAGTGGATTTCCCCCCCTCTCATTTCAGGACAAACTTTCTCTAAATTTTACAACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATCCCATGGGATAGGTTATAATCCTTTAGTTCCTTCCTCTCCCTGTGTATGCTTATGATTATGTGATGGAAAAATTCGTTTTATCATATGGCCTGAGCTGAATGTTCGATAGAAAATTGAAATGATTTATCTTATGTAGAGGTTGTGGAACATGCATGTGGAATGGCATCGCTGCAAATGGGGTAGTATGTCTCTCATGTGTCACATGGAATTGTTGATACCTGCAGCATCATAG ATGAGGAACTTTGTTTGCATTGTTTGGTTTCTGAGAAAACATTTGAGAAAGTTAAGTTCCTTTAGGTACGGGTACGAAAATGTGCTTTTGTTTATAGGCAAGGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAAGAATTTAAAGCTGCAGTATCTGCTGCAATGCAAGCTTTTCCTGCTTGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGCTCAAGCTTCAAGAACTCGTTAGGCGAGATATCAGGTTGTGGAACATGCATGTGGAATGGCATCGCTGCAAATGGGGTAGTATGTCTCTCATGTGTCACATGGAATTGTTGATACCTGCAGCATCATAG ATGAGGAACTTTGTTTGCATTGTTTGGTTTCTGAGAAAACATTTGAGAAAGTTAAGTTCCTTTAGGTACGGGTACGAAAATGTGCTTTTGTTTATAGGCAAGGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGAAGAATTTAAAGCTGCAGTATCTGCTGCAATGCAAGCTTTTCCTGCTTGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGCTCAAGCTTCAAGAACTCGTTAGGCGAGATATCAGGTTGTGGAACATGCATGTGGAATGGCATCGCTGCAAATGGGGTAGTATGTCTCTCATGTGTCACATGGAATTGTTGATACCTGCAGCATCATAG MRNFVCIVWFLRKHLRKLSSFRYGYENVLLFIGKEVVSQVPLTTNEEFKAAVSAAMQAFPAWRNTPVTTRQRIMLKLQELVRRDIRLWNMHVEWHRCKWGSMSLMCHMELLIPAAS Homology
BLAST of CmoCh19G005070 vs. ExPASy Swiss-Prot
Match: Q0WM29 (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH6B2 PE=1 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 6.7e-17 Identity = 42/59 (71.19%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy Swiss-Prot
Match: Q54I10 (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum OX=44689 GN=mmsdh PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.2e-07 Identity = 24/52 (46.15%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy Swiss-Prot
Match: Q02253 (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06 Identity = 22/52 (42.31%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy Swiss-Prot
Match: P52713 (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans OX=6239 GN=alh-8 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy Swiss-Prot
Match: Q02252 (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens OX=9606 GN=ALDH6A1 PE=1 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 3.1e-06 Identity = 28/87 (32.18%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy TrEMBL
Match: A0A6J1JI32 (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) OS=Cucurbita maxima OX=3661 GN=LOC111485986 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy TrEMBL
Match: A0A6J1C484 (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) OS=Momordica charantia OX=3673 GN=LOC111008344 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy TrEMBL
Match: A0A6J1EIR0 (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) OS=Cucurbita moschata OX=3662 GN=LOC111434633 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy TrEMBL
Match: A0A7J6XDT9 (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) OS=Thalictrum thalictroides OX=46969 GN=FRX31_002439 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.2e-16 Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of CmoCh19G005070 vs. ExPASy TrEMBL
Match: A0A067E000 (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0094071mg PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16 Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CmoCh19G005070 vs. NCBI nr
Match: XP_022927866.1 (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Cucurbita moschata]) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. NCBI nr
Match: XP_023530795.1 (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. NCBI nr
Match: KAG6588740.1 (Dynamin-related protein 3A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. NCBI nr
Match: XP_022988736.1 (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Cucurbita maxima]) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. NCBI nr
Match: XP_022136696.1 (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CmoCh19G005070 vs. TAIR 10
Match: AT2G14170.1 (aldehyde dehydrogenase 6B2 ) HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18 Identity = 42/59 (71.19%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of CmoCh19G005070 vs. TAIR 10
Match: AT2G14170.2 (aldehyde dehydrogenase 6B2 ) HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18 Identity = 42/59 (71.19%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of CmoCh19G005070 vs. TAIR 10
Match: AT2G14170.3 (aldehyde dehydrogenase 6B2 ) HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18 Identity = 42/59 (71.19%), Postives = 52/59 (88.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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