CmoCh19G004360 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G004360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CCHC-type domain-containing protein
Location	Cmo_Chr19: 5298415 .. 5301195 (-)
RNA-Seq Expression	CmoCh19G004360
Synteny	CmoCh19G004360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACGATGAGGCAATAGAAGACTTTTCCATGAAGTTGACGACGACCTTTAGCAGCATCTGTTCACTAGGCGACGTTGTGGAGGAGATTTGCATTGTCAAGAAGTTTCTCCGAGCTATTACCCCAAGATTCATGCAGATTGTCACCTCCATCGAGCAGTTCTGCAACCTAATAAACATGTTGATTGAGGAGATCATTGTTCGTCTTAAGGTTCATGAGGAGAGACTTCGTGGCTACGAAGACAAAGAGGAGGAGAAAAACCTCTCACTCACACATGAGGAGTGGGTCGCATGGACGAAAAAGAAAGATGCAAATGACTCTTCTTTTTCAGGTATGAGCAGACATGGCAGCCATAACAAAGAAAAAAGAGGTCATGGACGTGGCCGCAGAGATGGAGGCAAAGGAGGTCGTGACAATATCTCACAAACCCATTAAAATGTCAACCCTTGGAAGGACAAGAGTATGATCAAGTGTTAATCTTGTAGAAAATATGGGCATTATGCAGTAGTGTGCCACAACAAGGAGAGTGATGAGGAGGCAAATCTTATCTTCTCAGATGATGAAGAGCCCACATTGATGTTGGTTGAGAAAATGCCCAACATGTTGATGCTCAATGAGGAGAAGGTTATGATGAACGATGTAACGATCAGAGTTTCTAGAATAAAATAAAATAAAATAAAAATAAAATAAATAATTAAATGTAATCTCTTCAGAAATCGAGAGATTTCCTGTGAGACTTTTATTGCCTAATAGAAACATTCCTATTGCTCTAAGTTTTCTTATCCTAAAACCCTAGAAAAAATCCTAGAATGCCTTATTGGGAAATGTCTTAAGATTATTTTTATATTTCTATGCCCAACCTTTTACATCCCTTGAAAACGATTCTCTCCAAACTTTCCTTCGGAACGTTGGGTTACTCTTCGGAGGAAGAATTGAGTGGAAGTAAGGTATTGATGTCGGGATCATTGTGTCAAAGAAGGTTGACCGTCGAAAATCGGTGTTCAAGACGTTGTGGGATCGTCGGTGCGTCGCCGGAATCGGGGAGGTGGAAATTAGGGTTTCGACTTGTCGGGTAAGGAAGGCGAGGTTTTTGGAATCGGGTCGAGCCGCAGATGGACGCTCAACAGCTCCAGCTGCTTCGCACACGTACACAGTGCGCCTCGCCTCGCATGTGTATGAAATCGGTTCGGTTCCGTCAATTCTCGCAACTCGACTTGGCGGCTTAGTTGGTCGGCTCGGTAGCTCGGCTTGGCAGCTTTGGTATCACTGTATTATATCGATTCCAAGGTTTTCGGTCCTTCCGAAGCCGTTTATGCCCTTAGTTTTACCATCCGAGGTCAGTATAGTTCCTAACTATCAAAGACAGATTGTATTGGGAGTTTATTTTGATAAATAGCATGAGATTAGCTAGGGTATGTTATGAAACGTCCCTAAGTTTTTTTTGTGGTTATTATAGGACGTATTTAACCGTTGGGATTAGCTCGTTGTGAGTGACTTCAACCAAAGCCATCGAGGTAAGTGACCTTACTGTTGGAGTTAGTTTACCACGTGTTGTATGATGGTGCGTGCCCTGTGGCCCCTGCATGCACCATGTTTTATTATGTGATATGACTATATGATTTATGAATTATGTAACTATTTATGCTATGAAACGTAATGGGTTATATTGACTGTTGACTGTTTATGCGATATGTTAGTAATATATGCCATGAAAATGTTGATCGATGCCTTGGATACATGTAGTATTATCAAGTCATGTCATGAGGTGTTTATGCAACTGGAATGTATTTTCATGTTATGTAATATGTCATGTAATGTAAGTCATGTGAGATGCCATGTAATGTAAGAAACGTATATGCGATGTTAGCACTGCTTATGTAATGCCATGTTAGATATGTTAAGGGACCTCATGCATATATGTATGTCACGTGCATCGGGATTCTTCCCCTTTATGATACGAAAGAATGAATTACAATATTTATGTTCGCTATGATGTCATGCGGGCCCTTTTCTGTTATGTGGTGTCCGGCGACGTGTAACACGTTGTGCCCGACCAAGCTAGGCCCAGGGGGTATGTATACGAGGCCGCCTGGTGAGTTCATGTACGTGTACATGTGCCGTGTGTGAAGGAGTACCACACACCCAACCCTACCTGGAATAGGAAAGCGCCCAAGACTATGTAAAGTTTATGAAAAGTTAGGTCTCACTCATATGTTGCATGTGTTTGCATTCCTAACCCCAACAGTGCGGTGACTTACTAAGTATTTTGTAAAATACTCAAGCCACGTGCTATCTACATTTTTCAGGTAAAGGCAAGGCGCCAATGTATGGTTGACGGCGGAGCTGGGGCCACCATGGAAGTTGGAGATGGGATATTTTTAGGAGTTTACTTCTATTTGACTGTTTTAAGTTATAACATTGAGTATTGTATTGGATTTATTTTGAATTCAATTATTGAAGGATTATTTTCCGAGATAGGGTTGTTTTGAATTTATGAATCTTTATGAAAGACTCTGTTAGTGTTTTTCCAAAGTTATTTACTATGAGCTTCCACATAATGAATTATGTATGCATAGGTGATGTCACTAATTAGGTTTAGAAAATTAGGGGTGTTACAAACTCCTTCATAGATGGAGAAGACCAAGTGGAGAGCAGCATTGGTACCTAGACAACGGAGCAAGTAACCACATGACCGGAGATCGAGAAAAGTTTAAGGACCTCTATGAGAAGTTCACTGAAAACGTGAACCTTTGCGACAGATCAATTGTACCGATCTAA

mRNA sequence

ATGAAGGACGATGAGGCAATAGAAGACTTTTCCATGAAGTTGACGACGACCTTTAGCAGCATCTGTTCACTAGGCGACGTTGTGGAGGAGATTTGCATTGTCAAGAAGTTTCTCCGAGCTATTACCCCAAGATTCATGCAGATTGTCACCTCCATCGAGCAGTTCTGCAACCTAATAAACATGTTGATTGAGGAGATCATTGTTCGTCTTAAGGTTCATGAGGAGAGACTTCGTGGCTACGAAGACAAAGAGGAGGAGAAAAACCTCTCACTCACACATGAGGAGTGGGTCGCATGGACGAAAAAGAAAGATGCAAATGACTCTTCTTTTTCAGGTATGAGCAGACATGGCAGCCATAACAAAGAAAAAAGAGGTCATGGACGTGGCCGCAGAGATGGAGGCAAAGGAGTAGTGTGCCACAACAAGGAGAGTGATGAGGAGGCAAATCTTATCTTCTCAGATGATGAAGAGCCCACATTGATGTTGGTTGAGAAAATGCCCAACATGTTGATGCTCAATGAGGAGAAGGTTGACCGTCGAAAATCGGTGTTCAAGACGTTGTGGGATCGTCGGTGCGTCGCCGGAATCGGGGAGGTGGAAATTAGGGTTTCGACTTGTCGGGTAAGGAAGGCGAGGTTTTTGGAATCGGGTCGAGCCGCAGATGGACGCTCAACAGCTCCAGCTGCTTCGCACACGTACACAGTGCGCCTCGCCTCGCATGTGTATGAAATCGGTTCGGTTCCGTCAATTCTCGCAACTCGACTTGGCGGCTTAGTTGGTCGGCTCGGTAGCTCGGCTTGGCAGCTTTGATGGAGAAGACCAAGTGGAGAGCAGCATTGGTACCTAGACAACGGAGCAAGTAACCACATGACCGGAGATCGAGAAAAGTTTAAGGACCTCTATGAGAAGTTCACTGAAAACGTGAACCTTTGCGACAGATCAATTGTACCGATCTAA

Coding sequence (CDS)

ATGAAGGACGATGAGGCAATAGAAGACTTTTCCATGAAGTTGACGACGACCTTTAGCAGCATCTGTTCACTAGGCGACGTTGTGGAGGAGATTTGCATTGTCAAGAAGTTTCTCCGAGCTATTACCCCAAGATTCATGCAGATTGTCACCTCCATCGAGCAGTTCTGCAACCTAATAAACATGTTGATTGAGGAGATCATTGTTCGTCTTAAGGTTCATGAGGAGAGACTTCGTGGCTACGAAGACAAAGAGGAGGAGAAAAACCTCTCACTCACACATGAGGAGTGGGTCGCATGGACGAAAAAGAAAGATGCAAATGACTCTTCTTTTTCAGGTATGAGCAGACATGGCAGCCATAACAAAGAAAAAAGAGGTCATGGACGTGGCCGCAGAGATGGAGGCAAAGGAGTAGTGTGCCACAACAAGGAGAGTGATGAGGAGGCAAATCTTATCTTCTCAGATGATGAAGAGCCCACATTGATGTTGGTTGAGAAAATGCCCAACATGTTGATGCTCAATGAGGAGAAGGTTGACCGTCGAAAATCGGTGTTCAAGACGTTGTGGGATCGTCGGTGCGTCGCCGGAATCGGGGAGGTGGAAATTAGGGTTTCGACTTGTCGGGTAAGGAAGGCGAGGTTTTTGGAATCGGGTCGAGCCGCAGATGGACGCTCAACAGCTCCAGCTGCTTCGCACACGTACACAGTGCGCCTCGCCTCGCATGTGTATGAAATCGGTTCGGTTCCGTCAATTCTCGCAACTCGACTTGGCGGCTTAGTTGGTCGGCTCGGTAGCTCGGCTTGGCAGCTTTGA

Protein sequence

MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRRKSVFKTLWDRRCVAGIGEVEIRVSTCRVRKARFLESGRAADGRSTAPAASHTYTVRLASHVYEIGSVPSILATRLGGLVGRLGSSAWQL

Homology

[Close]

BLAST of CmoCh19G004360 vs. ExPASy TrEMBL
Match: A0A6J1EU16 (uncharacterized protein LOC111436574 OS=Cucurbita moschata OX=3662 GN=LOC111436574 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 7.4e-46
Identity = 118/199 (59.30%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MKD E+I+DF+MKLTT  S I SLGDVVEEI +VKKFL AI PRFMQIVTSIEQF +L N
Sbjct: 83  MKDGESIDDFTMKLTTVVSGIRSLGDVVEEISVVKKFLLAILPRFMQIVTSIEQFDDLKN 142

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLKVHEERLR YEDKEE K L LTHEEW+A  KKKDA DSS S MS   S  
Sbjct: 143 MSVEEVVGRLKVHEERLRDYEDKEEGKYLLLTHEEWLARMKKKDAEDSSSSSMSERDSLY 202

Query: 121 KEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEE 167
           KEKR  G GR  GG+G                                   C NKE DEE
Sbjct: 203 KEKRCRGHGRGRGGRGGRDSTTQIDESVNPQKNKSMIKCYSCGKYEHYAAKCGNKEHDEE 262

[Close]

BLAST of CmoCh19G004360 vs. ExPASy TrEMBL
Match: A0A6J1L5F9 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111500187 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.3e-41
Identity = 109/197 (55.33%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MKD E+I+ F MKLT   S +CSL  VVEE  +VKKFLRA+ PRFMQIV SIEQF +L N
Sbjct: 1   MKDSESIDRFFMKLTMIVSGVCSLRGVVEETSVVKKFLRAVPPRFMQIVASIEQFDDLKN 60

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +E+ I  LKVHEERLRGYE+KE+EK L LTHEEW+A TKKKDA    F     H   +
Sbjct: 61  MSVEKAIGHLKVHEERLRGYENKEDEKYLLLTHEEWLAQTKKKDAMTLLF-----HPRKD 120

Query: 121 KEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRR 180
           K         + G   V CHN   DEEANL+  DD+EPTLML EK+ N+L+LNEEKV + 
Sbjct: 121 KSMIKCYSCGKYGHYAVECHNNGRDEEANLMSMDDDEPTLMLGEKILNLLVLNEEKVLQT 180

Query: 181 KSVF-KTLWDRRCVAGI 197
            S+  K  W   C  G+
Sbjct: 181 PSLMEKIKWRPECGLGL 192

[Close]

BLAST of CmoCh19G004360 vs. ExPASy TrEMBL
Match: A0A6J1GT03 (inositol transporter 4-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111457210 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-36
Identity = 93/142 (65.49%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L N
Sbjct: 277 MKNGESIDDFSMKLTIIVSGIRSIGDMVEEIFVVKKFLRAVPSRFMQIVTSIEQFGDLKN 336

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A TKK D  DS FS      SHN
Sbjct: 337 MSVEEVVGRLKVHEERLRGYEDKEEEKHLLLTHEEWLARTKKNDVADSFFSSTRGRDSHN 396

Query: 121 KE------KRGHGRGRRDGGKG 137
            E       RGHGRGR  GG+G
Sbjct: 397 NENKGRERSRGHGRGR--GGRG 416

[Close]

BLAST of CmoCh19G004360 vs. ExPASy TrEMBL
Match: A0A6J1GUE5 (inositol transporter 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457210 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-36
Identity = 93/142 (65.49%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L N
Sbjct: 280 MKNGESIDDFSMKLTIIVSGIRSIGDMVEEIFVVKKFLRAVPSRFMQIVTSIEQFGDLKN 339

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A TKK D  DS FS      SHN
Sbjct: 340 MSVEEVVGRLKVHEERLRGYEDKEEEKHLLLTHEEWLARTKKNDVADSFFSSTRGRDSHN 399

Query: 121 KE------KRGHGRGRRDGGKG 137
            E       RGHGRGR  GG+G
Sbjct: 400 NENKGRERSRGHGRGR--GGRG 419

[Close]

BLAST of CmoCh19G004360 vs. ExPASy TrEMBL
Match: A0A6L2JF84 (Zinc finger, CCHC-type OS=Tanacetum cinerariifolium OX=118510 GN=Tci_007225 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25
Identity = 83/180 (46.11%), Postives = 105/180 (58.33%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MKD E++++F+M+L T  + I SLGD +EEI +VKKFLRA+  RFMQIVTSIEQF +L N
Sbjct: 1   MKDSESVDEFAMRLNTIVTGIRSLGDTIEEITVVKKFLRAVPIRFMQIVTSIEQFGDLKN 60

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLK HEERLRGY D + E+ L LTH EW++ +K+    DSS           
Sbjct: 61  MTVEEVVGRLKTHEERLRGYGDPKVEQTLLLTHIEWLSRSKRTVERDSS----------- 120

Query: 121 KEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLM---LVEKMPNMLMLNEEKV 178
                 GRG                 E NL  + D EPTLM   L E     + LNEEKV
Sbjct: 121 --NASRGRG----------------XEVNLTQTIDNEPTLMMAILQENAYGEVFLNEEKV 151

[Close]

BLAST of CmoCh19G004360 vs. NCBI nr
Match: XP_022930088.1 (uncharacterized protein LOC111436574 [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-45
Identity = 118/199 (59.30%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MKD E+I+DF+MKLTT  S I SLGDVVEEI +VKKFL AI PRFMQIVTSIEQF +L N
Sbjct: 83  MKDGESIDDFTMKLTTVVSGIRSLGDVVEEISVVKKFLLAILPRFMQIVTSIEQFDDLKN 142

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLKVHEERLR YEDKEE K L LTHEEW+A  KKKDA DSS S MS   S  
Sbjct: 143 MSVEEVVGRLKVHEERLRDYEDKEEGKYLLLTHEEWLARMKKKDAEDSSSSSMSERDSLY 202

Query: 121 KEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEE 167
           KEKR  G GR  GG+G                                   C NKE DEE
Sbjct: 203 KEKRCRGHGRGRGGRGGRDSTTQIDESVNPQKNKSMIKCYSCGKYEHYAAKCGNKEHDEE 262

[Close]

BLAST of CmoCh19G004360 vs. NCBI nr
Match: XP_023523513.1 (uncharacterized protein LOC111787714 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.8 bits (460), Expect = 7.8e-42
Identity = 104/205 (50.73%), Postives = 128/205 (62.44%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MKD ++I++FSMKL T  S ICSL + +EEI +VKKFLR + PR M   TSIE+F NL N
Sbjct: 29  MKDGKSIDNFSMKLMTIISGICSLDNTLEEISVVKKFLRVVLPRLMH--TSIEKFNNLNN 88

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +E++I RLK HEERL GY+DKEEEK+L LTHEEW+ W KKKD  DSS SG + H  HN
Sbjct: 89  MSVEKVIGRLKAHEERLCGYKDKEEEKHLLLTHEEWLTWMKKKDTTDSSSSGTNGHDGHN 148

Query: 121 KEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEE 173
           KE +GH RGR  GG G                                 + C  K+ DEE
Sbjct: 149 KESKGHRRGRGPGGIGGRGNTSKIHDNVNPWQDKSMIKCYSCEKYGHYAIECRKKKHDEE 208

[Close]

BLAST of CmoCh19G004360 vs. NCBI nr
Match: XP_023007609.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima])

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-40
Identity = 109/197 (55.33%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MKD E+I+ F MKLT   S +CSL  VVEE  +VKKFLRA+ PRFMQIV SIEQF +L N
Sbjct: 1   MKDSESIDRFFMKLTMIVSGVCSLRGVVEETSVVKKFLRAVPPRFMQIVASIEQFDDLKN 60

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +E+ I  LKVHEERLRGYE+KE+EK L LTHEEW+A TKKKDA    F     H   +
Sbjct: 61  MSVEKAIGHLKVHEERLRGYENKEDEKYLLLTHEEWLAQTKKKDAMTLLF-----HPRKD 120

Query: 121 KEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRR 180
           K         + G   V CHN   DEEANL+  DD+EPTLML EK+ N+L+LNEEKV + 
Sbjct: 121 KSMIKCYSCGKYGHYAVECHNNGRDEEANLMSMDDDEPTLMLGEKILNLLVLNEEKVLQT 180

Query: 181 KSVF-KTLWDRRCVAGI 197
            S+  K  W   C  G+
Sbjct: 181 PSLMEKIKWRPECGLGL 192

[Close]

BLAST of CmoCh19G004360 vs. NCBI nr
Match: XP_022955160.1 (inositol transporter 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 8.4e-36
Identity = 93/142 (65.49%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L N
Sbjct: 280 MKNGESIDDFSMKLTIIVSGIRSIGDMVEEIFVVKKFLRAVPSRFMQIVTSIEQFGDLKN 339

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A TKK D  DS FS      SHN
Sbjct: 340 MSVEEVVGRLKVHEERLRGYEDKEEEKHLLLTHEEWLARTKKNDVADSFFSSTRGRDSHN 399

Query: 121 KE------KRGHGRGRRDGGKG 137
            E       RGHGRGR  GG+G
Sbjct: 400 NENKGRERSRGHGRGR--GGRG 419

[Close]

BLAST of CmoCh19G004360 vs. NCBI nr
Match: XP_022955161.1 (inositol transporter 4-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 8.4e-36
Identity = 93/142 (65.49%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLIN 60
           MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L N
Sbjct: 277 MKNGESIDDFSMKLTIIVSGIRSIGDMVEEIFVVKKFLRAVPSRFMQIVTSIEQFGDLKN 336

Query: 61  MLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSFSGMSRHGSHN 120
           M +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A TKK D  DS FS      SHN
Sbjct: 337 MSVEEVVGRLKVHEERLRGYEDKEEEKHLLLTHEEWLARTKKNDVADSFFSSTRGRDSHN 396

Query: 121 KE------KRGHGRGRRDGGKG 137
            E       RGHGRGR  GG+G
Sbjct: 397 NENKGRERSRGHGRGR--GGRG 416

The following BLAST results are available for this feature:

BLAST of CmoCh19G004360 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh19G004360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EU16	7.4e-46	59.30	uncharacterized protein LOC111436574 OS=Cucurbita moschata OX=3662 GN=LOC1114365...	[more]
A0A6J1L5F9	9.3e-41	55.33	glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GT03	4.1e-36	65.49	inositol transporter 4-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1GUE5	4.1e-36	65.49	inositol transporter 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6L2JF84	2.5e-25	46.11	Zinc finger, CCHC-type OS=Tanacetum cinerariifolium OX=118510 GN=Tci_007225 PE=4...	[more]

BLAST of CmoCh19G004360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930088.1	1.5e-45	59.30	uncharacterized protein LOC111436574 [Cucurbita moschata]	[more]
XP_023523513.1	7.8e-42	50.73	uncharacterized protein LOC111787714 [Cucurbita pepo subsp. pepo]	[more]
XP_023007609.1	1.9e-40	55.33	glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]	[more]
XP_022955160.1	8.4e-36	65.49	inositol transporter 4-like isoform X2 [Cucurbita moschata]	[more]
XP_022955161.1	8.4e-36	65.49	inositol transporter 4-like isoform X3 [Cucurbita moschata]	[more]

BLAST of CmoCh19G004360 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..138
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..131
None	No IPR available	PANTHER	PTHR34676:SF11	ZINC FINGER, CCHC-TYPE-RELATED	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004360.1	CmoCh19G004360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0016020	membrane