CmoCh19G004160 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G004160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heavy metal-associated isoprenylated plant protein 39-like
Location	Cmo_Chr19: 4925306 .. 4926665 (+)
RNA-Seq Expression	CmoCh19G004160
Synteny	CmoCh19G004160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGATAGCGACTTTCCCTTTCTTTTTTATTTTTTATTTTTTATAAACCTTTTTCTCTCTTCATTCTCTTTCACATTTCATTTTTTGCTCATCACCCAAATGGCTCAGGTTTCTCCTCTTCCTTTTTCTCTCTGATTCCTCTTTCTTTCTTCTTATTACATTTCTGTTTTCTCTTCGATCTCTTGCAGAAAGTTGTGCTGAAGGTGATGACCATGACTGACGACAAGACGAAGCAGAAGGCAATCGAAGCTGCTGCCGACATCTACGGTTCGTCTCCGATTCTCTGTTTTTTTTTTTTTTTTTTTTCCAAATCTTTCTTCCGAGTTTCTGATCTCTAAGTGTGGAAAATCGATCGACTCTGTTTGTTTGCTTGTTCTGTTGTCTGAAAAGAATCGGAAACTGAAAAACTACATGAAATTATTTGGAATCGGAAATTGAAAAACGATATGAAATCATTCGGAATCGTAAACTGAAAAACGATATGGAATCATTTGGAATCGGAAATTGAAAAACGATGTGAAATCATTTGGAATCATAAACTGAAAAACGATATGGAATCATTTGGAATCGGAAATTGAAGAACGATATGAAATCATTCGGAATCGGAAATTGAAAAACGATATGAAATCATTTGGAATCGTAAACTGAAAAACGATATGAAATCATTTGAATGATTAGGTGTCGATTCGATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATAGGATCGATGGATGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGACTTGATATCAGTCGGACCTGCAAAGGAAGAGAAGAAAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGAAAAAAGAGGAGAAAAAAGAGGAGAAAAAGGAAGAGAAAAAGGAAGAAAAAAAGTGAAAAAGTACAATTCCTTTCCCCCTTCTTTCAATTTTGATTTTCCATACATTTAACGAATTTTAATTCAAATAAGTTCTTCTCAATTCATATCAAAATTACATGAAGAACAAACCTCTGTACCTACTTAATTTTTGTTTTCATAATCCCTTTCAAATTCATGCGCTGATTCACTCATAATGCAGCCATTTGTATTTCCAACTTACGAACACAACAGACAATTTTCCCTAATTGGTATCTAAAATTTATGTAACAGATCGACATATTTTGTTTTTTCATGTTTAGTGGGACCTACAAAGTTTGTTCCGTGGTTCCGTGGTTCCGTGGTTTCTTGATTTTCGCAATTTAAGCATAATTTAATGACTAGATAAGAATTTGAAATGGGATATGATTTTGGTGGTGGTGGTTGAGCGGGGCATGGGAAAATGTTTAGAGCTATATGGCCAACAATGGTG

mRNA sequence

TTAGATAGCGACTTTCCCTTTCTTTTTTATTTTTTATTTTTTATAAACCTTTTTCTCTCTTCATTCTCTTTCACATTTCATTTTTTGCTCATCACCCAAATGGCTCAGAAAGTTGTGCTGAAGGTGATGACCATGACTGACGACAAGACGAAGCAGAAGGCAATCGAAGCTGCTGCCGACATCTACGGTGTCGATTCGATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATAGGATCGATGGATGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGACTTGATATCAGTCGGACCTGCAAAGGAAGAGAAGAAAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGAAAAAAGAGGAGAAAAAAGAGGAGAAAAAGGAAGAGAAAAAGGAAGAAAAAAAGTGAAAAAGTACAATTCCTTTCCCCCTTCTTTCAATTTTGATTTTCCATACATTTAACGAATTTTAATTCAAATAAGTTCTTCTCAATTCATATCAAAATTACATGAAGAACAAACCTCTGTACCTACTTAATTTTTGTTTTCATAATCCCTTTCAAATTCATGCGCTGATTCACTCATAATGCAGCCATTTGTATTTCCAACTTACGAACACAACAGACAATTTTCCCTAATTGGTATCTAAAATTTATGTAACAGATCGACATATTTTGTTTTTTCATGTTTAGTGGGACCTACAAAGTTTGTTCCGTGGTTCCGTGGTTCCGTGGTTTCTTGATTTTCGCAATTTAAGCATAATTTAATGACTAGATAAGAATTTGAAATGGGATATGATTTTGGTGGTGGTGGTTGAGCGGGGCATGGGAAAATGTTTAGAGCTATATGGCCAACAATGGTG

Coding sequence (CDS)

ATGGCTCAGAAAGTTGTGCTGAAGGTGATGACCATGACTGACGACAAGACGAAGCAGAAGGCAATCGAAGCTGCTGCCGACATCTACGGTGTCGATTCGATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATAGGATCGATGGATGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGACTTGATATCAGTCGGACCTGCAAAGGAAGAGAAGAAAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGAAAAAAGAGGAGAAAAAAGAGGAGAAAAAGGAAGAGAAAAAGGAAGAAAAAAAGTGA

Protein sequence

MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK

Homology

[Close]

BLAST of CmoCh19G004160 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.2e-06
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 3  QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
          Q VVLK + +  +KTKQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2  QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 63 KVDLISVGPAKEEKKEEKKEEKKEEKK 90
            + ISVGP KE +K++  + KK E K
Sbjct: 62 HTEFISVGPVKEPEKKKPDDPKKPETK 85

[Close]

BLAST of CmoCh19G004160 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-05
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
           +K+VLK + + DD+ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
            + D++ VGPAKE +KE+K+E KKE   E  K+E +  K+E KK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKK 104

[Close]

BLAST of CmoCh19G004160 vs. ExPASy TrEMBL
Match: A0A6J1I6X1 (heavy metal-associated isoprenylated plant protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111470547 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. ExPASy TrEMBL
Match: A0A6J1EZN9 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111438043 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. ExPASy TrEMBL
Match: A0A6J1E094 (heavy metal-associated isoprenylated plant protein 39 OS=Momordica charantia OX=3673 GN=LOC111025962 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-34
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKE+KKEEKK
Sbjct: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEDKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. ExPASy TrEMBL
Match: A0A6J1A686 (heavy metal-associated isoprenylated plant protein 39 OS=Herrania umbratica OX=108875 GN=LOC110415078 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33
Identity = 100/105 (95.24%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTV+G MDAVA+VKKLKK
Sbjct: 36  MAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGQMDAVAVVKKLKK 95

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 96  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 140

[Close]

BLAST of CmoCh19G004160 vs. ExPASy TrEMBL
Match: A0A2N9GN73 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28897 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.8e-33
Identity = 99/105 (94.29%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTDDKTKQKAIEAAADI+G+DSIAADLKDQKLTVIG MDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIFGIDSIAADLKDQKLTVIGQMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD++SVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDIVSVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. NCBI nr
Match: XP_022931768.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] >XP_022971860.1 heavy metal-associated isoprenylated plant protein 39 [Cucurbita maxima] >XP_023554196.1 heavy metal-associated isoprenylated plant protein 39 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6571798.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.0 bits (393), Expect = 1.8e-34
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. NCBI nr
Match: XP_022159597.1 (heavy metal-associated isoprenylated plant protein 39 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 6.8e-34
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKE+KKEEKK
Sbjct: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEDKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. NCBI nr
Match: XP_038888324.1 (heavy metal-associated isoprenylated plant protein 39 [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 8.9e-34
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of CmoCh19G004160 vs. NCBI nr
Match: KAG7011495.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           + QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 106 VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 150

[Close]

BLAST of CmoCh19G004160 vs. NCBI nr
Match: XP_023554195.1 (heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           + QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 28  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 87

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 88  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 132

[Close]

BLAST of CmoCh19G004160 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family )

HSP 1 Score: 140.6 bits (353), Expect = 7.3e-34
Identity = 93/103 (90.29%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTDDKTKQKAIEAAADI+GVDSIAAD+KDQKLTVIG MDAVA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEE 104
           VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEE+KEE+ ++
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEQKEEEPKK 103

[Close]

BLAST of CmoCh19G004160 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family )

HSP 1 Score: 51.2 bits (121), Expect = 5.8e-07
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 3  QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
          Q VVLK + +  +KTKQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2  QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 63 KVDLISVGPAKEEKKEEKKEEKKEEKK 90
            + ISVGP KE +K++  + KK E K
Sbjct: 62 HTEFISVGPVKEPEKKKPDDPKKPETK 85

[Close]

BLAST of CmoCh19G004160 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 7.6e-07
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
           +K+VLK + + DD+ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
            + D++ VGPAKE +KE+K+E KKE   E  K+E +  K+E KK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKK 104

[Close]

BLAST of CmoCh19G004160 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 7.6e-07
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
           +K+VLK + + DD+ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
            + D++ VGPAKE +KE+K+E KKE   E  K+E +  K+E KK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKK 104

The following BLAST results are available for this feature:

BLAST of CmoCh19G004160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTE3	8.2e-06	48.28	Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX...	[more]
O03982	1.1e-05	48.08	Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh19G004160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6X1	8.7e-35	100.00	heavy metal-associated isoprenylated plant protein 39 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EZN9	8.7e-35	100.00	heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata...	[more]
A0A6J1E094	3.3e-34	98.10	heavy metal-associated isoprenylated plant protein 39 OS=Momordica charantia OX=...	[more]
A0A6J1A686	1.6e-33	95.24	heavy metal-associated isoprenylated plant protein 39 OS=Herrania umbratica OX=1...	[more]
A0A2N9GN73	4.8e-33	94.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28897 PE=4 SV=1	[more]

BLAST of CmoCh19G004160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931768.1	1.8e-34	100.00	heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] ...	[more]
XP_022159597.1	6.8e-34	98.10	heavy metal-associated isoprenylated plant protein 39 [Momordica charantia]	[more]
XP_038888324.1	8.9e-34	98.10	heavy metal-associated isoprenylated plant protein 39 [Benincasa hispida]	[more]
KAG7011495.1	1.5e-33	98.10	Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyro...	[more]
XP_023554195.1	1.5e-33	98.10	heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucurbita pepo...	[more]

BLAST of CmoCh19G004160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23760.1	7.3e-34	90.29	Copper transport protein family	[more]
AT5G52740.1	5.8e-07	48.28	Copper transport protein family	[more]
AT1G01490.1	7.6e-07	48.08	Heavy metal transport/detoxification superfamily protein	[more]
AT1G01490.2	7.6e-07	48.08	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..105
None	No IPR available	GENE3D	3.30.70.100		coord: 1..75 e-value: 4.0E-19 score: 70.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..105
None	No IPR available	PANTHER	PTHR45811:SF43	PROTEIN PXR1-LIKE ISOFORM X1	coord: 2..105
None	No IPR available	PANTHER	PTHR45811	COPPER TRANSPORT PROTEIN FAMILY-RELATED	coord: 2..105
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 7..63 e-value: 8.1E-6 score: 26.2
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004160.1	CmoCh19G004160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding