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CmoCh19G004080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCATCTTAATTCTTAAACCCCAGCTCGACGAAGCTGTGTATATAAGCTTGGAAGCAAACCGCGAAGAGAAAGGGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTCAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGTACTTGGTGTTGGATCTTTCGATTTTGCTTCCGTTTTCTTCTGATTATGCAGTTTATATTCCTGGGTTTTTGTTCTATCATGGTGTTCTTCTTGGCTTTGAAATGATGGAGTTGGTTATCATCTACACTGAAATTAGAACCCAATGAGGGAAAATGCACACTTCTCTGCCATTTTGTGCTGGGAAATGAGAAATAATTCCTGTTTGAACAACCTTCAATTTGAATGATTGAGGAACAGAGATGAGTGAAATGTAGTCAGCTGTTCTTCAGCTGTGAAAACTGCATTTAGTAAATGTATATTGAATCCTTGATATGACCTTTTGGTAGAAAATATAATACCTAGCTAACTTCTCCTTAGGAGGATAGATGAACCAGGGTTTCAAACCAAACTTCTCCTTGGGAGGATAGATGGGTCGATTCAGGGGAGATCCAATGGAGATCCAACTTTCTATTCTCTCGTGGGATCTTAGCGCTTCCGGGGACCACCTCATCTCCTCTCTTCTTGAGAATCCATACATCCCTTATCAGTATCTTCTTAACCATTCTCAGGATATACTTTTGTTGGTTCGATCAATATATTTCTCAAGGTTACTTTCTTGGTCATTGGGCTAACTTGTCCTGTCTTTATAGTGAAGTTACGAATATGAGTTTCTTTCTAAATGCAACTTCATTATCATTACCCACTTAAAAATGAATCAGCCATCCATTTGGAAGTAATGGTTTCCTACTTTGCTTGGTATTTCCTTTTCTTCATCCTTCTTTTGTTGACAAATTACTTATGGTCAGGTTTAGGGACAACTTAACTTGTATGGTTTGGATCGAAAAAGCGAGATGGATTGAGTTCGGTTTCTTGGAATCTTGAGAGCAATGGAGGAGCTCTAAAACCATTTGAAGATTGCTGCTGAGTTATTCAAACCTTCATTTTGATCAGAATTTCATCGTCATTATGTGGATATTTAAGTGTTCATGTGTAAGGGGCTGTGTTTATGTGTGTTTAAAACTTTCTAACTTGTTTGCGAACAAGCTTTATATGTTGTAATGGTGTTTTACCCTTTGCCAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCCCAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAGAAGTTAGAGGAAACAGTAAGATACTCATTTTTCTTTAGGATGGATTTCATATTAGAAACGTTTCTTCTCCGATTTTCAGCTCCCGGGGAAAATCATGTCGTTGTTTTTATAAGAAAACCATAACAAGATTAGCACGAACACACGTGTGTGTGTGTGTAGTTAAAGAGCTTACCATATTCATAATCTGTCAACATCTCTTTTGGCTTTCCCTTTCGGGTTTTTCTTCAAGGTTTTTAAAACGCGTCTACTAAGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTATCCAATCGATGTGAGATCTCACAATCCACACCTCCCTTTGGGTGCCCAGCGTCCTCTCTAGCACTCGTTTCCCTCTCCAATCGATGTGGGACCCCCATCCACCCCCCATTAGGGCCTAGCATCCTTGCTTGCACACCGCATGGTGTCCATCCCCCTTCGGGGTTCAGCCTCCTCGCTAACACATCGTTCGGTGTCTGGCTCTGATACCATTTATAACAGTCCAAGCCCACCGCCAGCAAATGTTGTTCTCTTTGGGCTTTCGTTTCAAGTTTCCCCTCAATGTTTTTAAAACGTGTTTGTTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTCCGTTCATCTGGTCCTAATATTTCTCGTGACACAAAAGCAACACACAAAAAGAAGGAACTTACACATACACAAGAAATGCAGATTGGGAGATGGACCTTTACTTTCTATAAGACATGGTGATTAATGCATTCAACTGAATTAGCATACTCACTTAAGTTATTTCTAGTTTCGATTAGTTAATAATGCTATGCGTTACCGTTTTACGGGCACGAAAGTTAGTAGTACATCCAGTAGTGATGTGGGATAGAATTTATCATTGGGAGGGTTGTTAAAAGGCAGCCTAAACACAGGAAGATGGGTATACGAGAGGTGTCACAGATCGGGCCCTCGAGAGGCGCAATCATCTTATTATCTATGACAGAACTTTGTACAATGCAGGAGTCTGCCATTGAAGAATACTTCAAGCCAATTCACAAAGAAGCAGAGGCATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCCGCAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTTCAAACTGACAAAAATCAACACAATCACCAACTTTACTGATGATTTGATTAGATTAATGATGTCTGTTTTTGTGCAATTTTGGTGCTACTGATTTGATTTGTCTTAGTTTGCTTGACTGAAACCCTTGTTGGGCTCATTTTGGAGGTTGGTTTTTGTAATAACACGAGCCGAGCCCACCACTAGAAGATATTGTTCTCTTTGGGCTTTTCCTTCCAGAATCCCCTCTTAAGGTTTGTTTCTACACCCTTATAAAGAATGCTTCGACCCTCTCCAACCGATGTGAGATCTCACAATCCCATCCCCCTTCAAAGCCCAGCACTGACACTCGTTCCTCTCTCCAATTGATGTGGGATCTTATAGTCCACCCTCCTTTAGAGTTCAGCGTCGCCTCTGATACCATTTGTAACAACTAGTAGATATTGTTCTCTTTGGGCTTTCCCATCTGGACTTCTCCTTAAAGTTTTTAAAACACGTCTGCTAGAGAGAGGTTTCCACACCCTTGTAAAAATTGTTTAGTTTCCTCTCCAACCAACGTGGGATCTCACAGTTTTCTTGATATTCCGCTCGTATTCTTTCCTTCTTGGTTTTGGAGGATGTCTTCAAATATTCGAAACCCTCACCTCACCATCAAATCCATCTAGATTAAGATTAAATGCTAGAATTACTCGAACTAAACCCAAGAACTCTTATCCTTGAATTGTTCATCTTTTGTAACAACTCACACCTAACGCTAGCAAAATTCTTATCCTTGAATTGATCATCTTTTGTAACAACTCAAACCCACTATTAGCCGATATTATCCATTTTGGCCCGTTACGTATTACCGTCAGCCTCACGATTTTAAAACGCGTCTACTAGGGAAAGGTTTCCACATCTTTATAAGAAATGTTTCATTCACATCTCCAACCGACGTGTGATCTCACATCTTTATCCTAAAAATTCGTGATGAGAACGAGGTTTCCCAAGGAGGACTTGACCCATTCATTAATGTTTTTTGTTTGTTGTTAATGACCACATCTTGAATTTTGGAAGGTGGACCAATTTGAATCTTTAAATTCAAGTTCTTGACTTTTCTTGTAACAATATTGATGCCCCCTTCTTCCTCTCCAACATTTAAATATGAACACATGATTCATCAAATTAAGGTTGTCCCAATTTCAAATGGATGAGGTTACATGTCATTACTCGAAAATCACGTTGAATTCTATAAGAAAATCATGACCGTCGATTTGTTTGTGATGCTCATGCATTGTTTGAGATTACCGATATCTTTATCAATTGAACTTTATACAGGTCGATGAAACAGTGAAGAATTGTGCATATACGTGAAAACGAGGCTTCTTTAGACTATGTTTATAAATAATTTGTTAAATCAATGATGGTCGAG AAAATCATCTTAATTCTTAAACCCCAGCTCGACGAAGCTGTGTATATAAGCTTGGAAGCAAACCGCGAAGAGAAAGGGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTCAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCCCAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAGAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTCACAAAGAAGCAGAGGCATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCCGCAGGCTTTGTTTGAAAAAGCTGAGGCAGGTCGATGAAACAGTGAAGAATTGTGCATATACGTGAAAACGAGGCTTCTTTAGACTATGTTTATAAATAATTTGTTAAATCAATGATGGTCGAG ATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTCAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCCCAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAGAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTCACAAAGAAGCAGAGGCATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCCGCAGGCTTTGTTTGAAAAAGCTGAGGCAGGTCGATGA MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFEKAEAGR Homology
BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1EV87 (uncharacterized protein LOC111438069 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438069 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1EUN0 (uncharacterized protein LOC111438069 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438069 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.4e-55 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1I4C9 (uncharacterized protein LOC111470545 isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.5e-53 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1I6W6 (uncharacterized protein LOC111470545 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.5e-52 Identity = 118/125 (94.40%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1I338 (uncharacterized protein LOC111470545 isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51 Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022931799.1 (uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata]) HSP 1 Score: 230.3 bits (586), Expect = 9.0e-57 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022931796.1 (uncharacterized protein LOC111438069 isoform X1 [Cucurbita moschata]) HSP 1 Score: 224.6 bits (571), Expect = 4.9e-55 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022971856.1 (uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima]) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022971855.1 (uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima]) HSP 1 Score: 214.5 bits (545), Expect = 5.1e-52 Identity = 118/125 (94.40%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of CmoCh19G004080 vs. NCBI nr
Match: KAG7011487.1 (hypothetical protein SDJN02_26393, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.8 bits (543), Expect = 8.7e-52 Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of CmoCh19G004080 vs. TAIR 10
Match: AT4G17010.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 144.4 bits (363), Expect = 6.0e-35 Identity = 72/124 (58.06%), Postives = 103/124 (83.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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