CmoCh19G004080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G004080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	IIIB transcription factor
Location	Cmo_Chr19: 4790234 .. 4794166 (-)
RNA-Seq Expression	CmoCh19G004080
Synteny	CmoCh19G004080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCATCTTAATTCTTAAACCCCAGCTCGACGAAGCTGTGTATATAAGCTTGGAAGCAAACCGCGAAGAGAAAGGGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTCAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGTACTTGGTGTTGGATCTTTCGATTTTGCTTCCGTTTTCTTCTGATTATGCAGTTTATATTCCTGGGTTTTTGTTCTATCATGGTGTTCTTCTTGGCTTTGAAATGATGGAGTTGGTTATCATCTACACTGAAATTAGAACCCAATGAGGGAAAATGCACACTTCTCTGCCATTTTGTGCTGGGAAATGAGAAATAATTCCTGTTTGAACAACCTTCAATTTGAATGATTGAGGAACAGAGATGAGTGAAATGTAGTCAGCTGTTCTTCAGCTGTGAAAACTGCATTTAGTAAATGTATATTGAATCCTTGATATGACCTTTTGGTAGAAAATATAATACCTAGCTAACTTCTCCTTAGGAGGATAGATGAACCAGGGTTTCAAACCAAACTTCTCCTTGGGAGGATAGATGGGTCGATTCAGGGGAGATCCAATGGAGATCCAACTTTCTATTCTCTCGTGGGATCTTAGCGCTTCCGGGGACCACCTCATCTCCTCTCTTCTTGAGAATCCATACATCCCTTATCAGTATCTTCTTAACCATTCTCAGGATATACTTTTGTTGGTTCGATCAATATATTTCTCAAGGTTACTTTCTTGGTCATTGGGCTAACTTGTCCTGTCTTTATAGTGAAGTTACGAATATGAGTTTCTTTCTAAATGCAACTTCATTATCATTACCCACTTAAAAATGAATCAGCCATCCATTTGGAAGTAATGGTTTCCTACTTTGCTTGGTATTTCCTTTTCTTCATCCTTCTTTTGTTGACAAATTACTTATGGTCAGGTTTAGGGACAACTTAACTTGTATGGTTTGGATCGAAAAAGCGAGATGGATTGAGTTCGGTTTCTTGGAATCTTGAGAGCAATGGAGGAGCTCTAAAACCATTTGAAGATTGCTGCTGAGTTATTCAAACCTTCATTTTGATCAGAATTTCATCGTCATTATGTGGATATTTAAGTGTTCATGTGTAAGGGGCTGTGTTTATGTGTGTTTAAAACTTTCTAACTTGTTTGCGAACAAGCTTTATATGTTGTAATGGTGTTTTACCCTTTGCCAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCCCAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAGAAGTTAGAGGAAACAGTAAGATACTCATTTTTCTTTAGGATGGATTTCATATTAGAAACGTTTCTTCTCCGATTTTCAGCTCCCGGGGAAAATCATGTCGTTGTTTTTATAAGAAAACCATAACAAGATTAGCACGAACACACGTGTGTGTGTGTGTAGTTAAAGAGCTTACCATATTCATAATCTGTCAACATCTCTTTTGGCTTTCCCTTTCGGGTTTTTCTTCAAGGTTTTTAAAACGCGTCTACTAAGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTATCCAATCGATGTGAGATCTCACAATCCACACCTCCCTTTGGGTGCCCAGCGTCCTCTCTAGCACTCGTTTCCCTCTCCAATCGATGTGGGACCCCCATCCACCCCCCATTAGGGCCTAGCATCCTTGCTTGCACACCGCATGGTGTCCATCCCCCTTCGGGGTTCAGCCTCCTCGCTAACACATCGTTCGGTGTCTGGCTCTGATACCATTTATAACAGTCCAAGCCCACCGCCAGCAAATGTTGTTCTCTTTGGGCTTTCGTTTCAAGTTTCCCCTCAATGTTTTTAAAACGTGTTTGTTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTCCGTTCATCTGGTCCTAATATTTCTCGTGACACAAAAGCAACACACAAAAAGAAGGAACTTACACATACACAAGAAATGCAGATTGGGAGATGGACCTTTACTTTCTATAAGACATGGTGATTAATGCATTCAACTGAATTAGCATACTCACTTAAGTTATTTCTAGTTTCGATTAGTTAATAATGCTATGCGTTACCGTTTTACGGGCACGAAAGTTAGTAGTACATCCAGTAGTGATGTGGGATAGAATTTATCATTGGGAGGGTTGTTAAAAGGCAGCCTAAACACAGGAAGATGGGTATACGAGAGGTGTCACAGATCGGGCCCTCGAGAGGCGCAATCATCTTATTATCTATGACAGAACTTTGTACAATGCAGGAGTCTGCCATTGAAGAATACTTCAAGCCAATTCACAAAGAAGCAGAGGCATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCCGCAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTTCAAACTGACAAAAATCAACACAATCACCAACTTTACTGATGATTTGATTAGATTAATGATGTCTGTTTTTGTGCAATTTTGGTGCTACTGATTTGATTTGTCTTAGTTTGCTTGACTGAAACCCTTGTTGGGCTCATTTTGGAGGTTGGTTTTTGTAATAACACGAGCCGAGCCCACCACTAGAAGATATTGTTCTCTTTGGGCTTTTCCTTCCAGAATCCCCTCTTAAGGTTTGTTTCTACACCCTTATAAAGAATGCTTCGACCCTCTCCAACCGATGTGAGATCTCACAATCCCATCCCCCTTCAAAGCCCAGCACTGACACTCGTTCCTCTCTCCAATTGATGTGGGATCTTATAGTCCACCCTCCTTTAGAGTTCAGCGTCGCCTCTGATACCATTTGTAACAACTAGTAGATATTGTTCTCTTTGGGCTTTCCCATCTGGACTTCTCCTTAAAGTTTTTAAAACACGTCTGCTAGAGAGAGGTTTCCACACCCTTGTAAAAATTGTTTAGTTTCCTCTCCAACCAACGTGGGATCTCACAGTTTTCTTGATATTCCGCTCGTATTCTTTCCTTCTTGGTTTTGGAGGATGTCTTCAAATATTCGAAACCCTCACCTCACCATCAAATCCATCTAGATTAAGATTAAATGCTAGAATTACTCGAACTAAACCCAAGAACTCTTATCCTTGAATTGTTCATCTTTTGTAACAACTCACACCTAACGCTAGCAAAATTCTTATCCTTGAATTGATCATCTTTTGTAACAACTCAAACCCACTATTAGCCGATATTATCCATTTTGGCCCGTTACGTATTACCGTCAGCCTCACGATTTTAAAACGCGTCTACTAGGGAAAGGTTTCCACATCTTTATAAGAAATGTTTCATTCACATCTCCAACCGACGTGTGATCTCACATCTTTATCCTAAAAATTCGTGATGAGAACGAGGTTTCCCAAGGAGGACTTGACCCATTCATTAATGTTTTTTGTTTGTTGTTAATGACCACATCTTGAATTTTGGAAGGTGGACCAATTTGAATCTTTAAATTCAAGTTCTTGACTTTTCTTGTAACAATATTGATGCCCCCTTCTTCCTCTCCAACATTTAAATATGAACACATGATTCATCAAATTAAGGTTGTCCCAATTTCAAATGGATGAGGTTACATGTCATTACTCGAAAATCACGTTGAATTCTATAAGAAAATCATGACCGTCGATTTGTTTGTGATGCTCATGCATTGTTTGAGATTACCGATATCTTTATCAATTGAACTTTATACAGGTCGATGAAACAGTGAAGAATTGTGCATATACGTGAAAACGAGGCTTCTTTAGACTATGTTTATAAATAATTTGTTAAATCAATGATGGTCGAG

mRNA sequence

AAAATCATCTTAATTCTTAAACCCCAGCTCGACGAAGCTGTGTATATAAGCTTGGAAGCAAACCGCGAAGAGAAAGGGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTCAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCCCAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAGAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTCACAAAGAAGCAGAGGCATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCCGCAGGCTTTGTTTGAAAAAGCTGAGGCAGGTCGATGAAACAGTGAAGAATTGTGCATATACGTGAAAACGAGGCTTCTTTAGACTATGTTTATAAATAATTTGTTAAATCAATGATGGTCGAG

Coding sequence (CDS)

ATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTCAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCCCAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAGAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTCACAAAGAAGCAGAGGCATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCCGCAGGCTTTGTTTGAAAAAGCTGAGGCAGGTCGATGA

Protein sequence

MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFEKAEAGR

Homology

[Close]

BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1EV87 (uncharacterized protein LOC111438069 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438069 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAEAGR 127
           KAEAGR
Sbjct: 121 KAEAGR 126

[Close]

BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1EUN0 (uncharacterized protein LOC111438069 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438069 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.4e-55
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAE 124
           KAE
Sbjct: 121 KAE 123

[Close]

BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1I4C9 (uncharacterized protein LOC111470545 isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.5e-53
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAEALMKVQLEGEER+MKNMVKVMQ QALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAGR 127
            AEAGR
Sbjct: 121 NAEAGR 126

[Close]

BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1I6W6 (uncharacterized protein LOC111470545 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.5e-52
Identity = 118/125 (94.40%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAEALMKVQLEGEER+MKNMVKVMQ QALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAG 126
            AEAG
Sbjct: 121 NAEAG 125

[Close]

BLAST of CmoCh19G004080 vs. ExPASy TrEMBL
Match: A0A6J1I338 (uncharacterized protein LOC111470545 isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111470545 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAEALMKVQLEGEER+MKNMVKVMQ QALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEA 125
            AEA
Sbjct: 121 NAEA 124

[Close]

BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022931799.1 (uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata])

HSP 1 Score: 230.3 bits (586), Expect = 9.0e-57
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAEAGR 127
           KAEAGR
Sbjct: 121 KAEAGR 126

[Close]

BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022931796.1 (uncharacterized protein LOC111438069 isoform X1 [Cucurbita moschata])

HSP 1 Score: 224.6 bits (571), Expect = 4.9e-55
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAE 124
           KAE
Sbjct: 121 KAE 123

[Close]

BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022971856.1 (uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAEALMKVQLEGEER+MKNMVKVMQ QALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAGR 127
            AEAGR
Sbjct: 121 NAEAGR 126

[Close]

BLAST of CmoCh19G004080 vs. NCBI nr
Match: XP_022971855.1 (uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima])

HSP 1 Score: 214.5 bits (545), Expect = 5.1e-52
Identity = 118/125 (94.40%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAEALMKVQLEGEER+MKNMVKVMQ QALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAG 126
            AEAG
Sbjct: 121 NAEAG 125

[Close]

BLAST of CmoCh19G004080 vs. NCBI nr
Match: KAG7011487.1 (hypothetical protein SDJN02_26393, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 8.7e-52
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAE LMKVQLEGEERSMKNMVKVMQ Q LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQ-QQLFE 120

Query: 121 KAEAGR 127
           KAEAG+
Sbjct: 121 KAEAGK 125

[Close]

BLAST of CmoCh19G004080 vs. TAIR 10
Match: AT4G17010.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 144.4 bits (363), Expect = 6.0e-35
Identity = 72/124 (58.06%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60
           M+K+LE+GR+A+FYVRVLSGYE+RRIRS+RL+++KR++QA +RKV I ++P+Q +L EVR
Sbjct: 1   MNKLLEYGRKAMFYVRVLSGYEERRIRSYRLQLEKRIQQANQRKVEINRLPEQIVLSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120
           RMVEEMQ LNK++E TE+ IE+YFKPI K A  +M++QLEGE+++M  M+   Q +A+ +
Sbjct: 61  RMVEEMQNLNKQIENTEAQIEDYFKPIDKHASTIMEIQLEGEKKTMGTMMNATQQEAIRK 120

Query: 121 KAEA 125
             EA
Sbjct: 121 IEEA 124

The following BLAST results are available for this feature:

BLAST of CmoCh19G004080 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh19G004080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV87	4.4e-57	100.00	uncharacterized protein LOC111438069 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EUN0	2.4e-55	100.00	uncharacterized protein LOC111438069 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I4C9	6.5e-53	94.44	uncharacterized protein LOC111470545 isoform X6 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I6W6	2.5e-52	94.40	uncharacterized protein LOC111470545 isoform X5 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I338	1.2e-51	94.35	uncharacterized protein LOC111470545 isoform X7 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh19G004080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931799.1	9.0e-57	100.00	uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata]	[more]
XP_022931796.1	4.9e-55	100.00	uncharacterized protein LOC111438069 isoform X1 [Cucurbita moschata]	[more]
XP_022971856.1	1.3e-52	94.44	uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima]	[more]
XP_022971855.1	5.1e-52	94.40	uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima]	[more]
KAG7011487.1	8.7e-52	95.24	hypothetical protein SDJN02_26393, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh19G004080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17010.1	6.0e-35	58.06	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..79
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	PANTHER	PTHR35749	OSJNBA0084A10.10 PROTEIN	coord: 1..124
None	No IPR available	PANTHER	PTHR35749:SF3	SUBFAMILY NOT NAMED	coord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004080.1	CmoCh19G004080.1	mRNA