CmoCh19G004030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G004030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ankyrin repeat-containing protein BDA1-like
Location	Cmo_Chr19: 4737604 .. 4738117 (-)
RNA-Seq Expression	CmoCh19G004030
Synteny	CmoCh19G004030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTGAAACCATCCTTAGCCAAGAAGCTTAACCCAGAGGGCTATACCCCTATCCACTTGGCATTGCAAAATAACCAAACAAAAACCGTGTTGCGGCTCATCGATATCGATCGAGATCTCGTAAGCAGACAAGGGAGAGAGGGCTTAACTCCATTGCACATTGCAGCCTCGGGAGGCATGGATGATATATTGGCCAAGTTTCTAACTTCATGCCCAAAATCTATTAAACAATTGACCAATCGTAATGAGTCTGCTCTACATATTGCTGTTAAAAGTGAAGATATTGAGTCGGTTAAAATCTTGCTACAATGGATCCAACAAACTTGCATGACCTCAATACTTAATTGGTGTGATGACGAAGGAAACAATGCCATGCATCTTGCGGCGCTCGGAAATCAAGTTGAGGTCAGTATCGGAAATTTTCAAATAGAGCGTAGCTTAATTGGTTAATATATTATATTTGTTATTAAAAGGGTAGGACTTTTATGTTTGCAATAATCTCATGGAATGA

mRNA sequence

ATGAGGTTGAAACCATCCTTAGCCAAGAAGCTTAACCCAGAGGGCTATACCCCTATCCACTTGGCATTGCAAAATAACCAAACAAAAACCGTGTTGCGGCTCATCGATATCGATCGAGATCTCGTAAGCAGACAAGGGAGAGAGGGCTTAACTCCATTGCACATTGCAGCCTCGGGAGGCATGGATGATATATTGGCCAAGTTTCTAACTTCATGCCCAAAATCTATTAAACAATTGACCAATCGTAATGAGTCTGCTCTACATATTGCTGTTAAAAGTGAAGATATTGAGTCGGTTAAAATCTTGCTACAATGGATCCAACAAACTTGCATGACCTCAATACTTAATTGGTGTGATGACGAAGGAAACAATGCCATGCATCTTGCGGCGCTCGGAAATCAAGTTGAGGACTTTTATGTTTGCAATAATCTCATGGAATGA

Coding sequence (CDS)

ATGAGGTTGAAACCATCCTTAGCCAAGAAGCTTAACCCAGAGGGCTATACCCCTATCCACTTGGCATTGCAAAATAACCAAACAAAAACCGTGTTGCGGCTCATCGATATCGATCGAGATCTCGTAAGCAGACAAGGGAGAGAGGGCTTAACTCCATTGCACATTGCAGCCTCGGGAGGCATGGATGATATATTGGCCAAGTTTCTAACTTCATGCCCAAAATCTATTAAACAATTGACCAATCGTAATGAGTCTGCTCTACATATTGCTGTTAAAAGTGAAGATATTGAGTCGGTTAAAATCTTGCTACAATGGATCCAACAAACTTGCATGACCTCAATACTTAATTGGTGTGATGACGAAGGAAACAATGCCATGCATCTTGCGGCGCTCGGAAATCAAGTTGAGGACTTTTATGTTTGCAATAATCTCATGGAATGA

Protein sequence

MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGGMDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDDEGNNAMHLAALGNQVEDFYVCNNLME

Homology

[Close]

BLAST of CmoCh19G004030 vs. ExPASy Swiss-Prot
Match: Q8GYH5 (Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25
Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           M LKPS AKKLN  G +P+HLA++N+Q +  L L+ +D  LV  +GR G+TPLH+ A  G
Sbjct: 57  MILKPSFAKKLNEYGLSPLHLAVENDQVELALELVKVDPSLVRIRGRGGMTPLHLVAKKG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQ-----TCMTSIL 120
             D+L  FL +CP+SIK +    E+ LHI + ++  E +K+L  W+Q+          +L
Sbjct: 117 DVDLLTDFLLACPESIKDVNVNGETILHITIMNDKYEQLKVLTGWMQKMRDSDDVFIDVL 176

Query: 121 NWCDDEGNNAMHLAALGN 134
           N  D  GN  +HLAA  N
Sbjct: 177 NRRDRGGNTVLHLAAYEN 194

[Close]

BLAST of CmoCh19G004030 vs. ExPASy Swiss-Prot
Match: Q6AWW5 (Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana OX=3702 GN=At5g02620 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.9e-09
Identity = 37/132 (28.03%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 5   PSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGGMDDI 64
           P L+   +    T +H A      + V  L+D   DL +     G T LH AA  G   I
Sbjct: 115 PELSFTFDSSKTTALHTAASQGHGEIVCFLLDKGVDLAAIARSNGKTALHSAARNGHTVI 174

Query: 65  LAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDDEGNN 124
           + K +      + ++  + ++ALH+AVK ++ E V +L++        S++N  D++GN 
Sbjct: 175 VKKLIEKKAGMVTRVDKKGQTALHMAVKGQNTEIVDVLME-----ADGSLINSADNKGNT 234

Query: 125 AMHLAALGNQVE 137
            +H+A   N+ E
Sbjct: 235 PLHIAVRKNRAE 241

[Close]

BLAST of CmoCh19G004030 vs. ExPASy Swiss-Prot
Match: Q9C7A2 (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.4e-09
Identity = 40/133 (30.08%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 4   KPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGGMDD 63
           + S+AKK N  GY P+H+A        V  L+D D  L    G    TPL  AA  G  +
Sbjct: 154 RESIAKK-NRSGYDPLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTE 213

Query: 64  ILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDDEGN 123
           ++ + L+     ++   + N++ALH+A +   +E +K LL    Q     +    D +G 
Sbjct: 214 VVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQ-----LARRIDKKGQ 273

Query: 124 NAMHLAALGNQVE 137
            A+H+A  G   E
Sbjct: 274 TALHMAVKGQSSE 280

[Close]

BLAST of CmoCh19G004030 vs. ExPASy Swiss-Prot
Match: Q02989 (Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus OX=6925 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 34/130 (26.15%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 6   SLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGGMDDIL 65
           +L +K +  GYTP+H+A  +N+   V+ LI  + D+  R   +  TPLH+AA   + D+ 
Sbjct: 525 NLLEKADKNGYTPLHIAADSNKNDFVMFLIGNNADVNVRTKSDLFTPLHLAARRDLTDVT 584

Query: 66  AKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDDEGNNA 125
              +      +        + LH+++ S   E+  IL++        +++N     G   
Sbjct: 585 QTLIDITEIDLNAQDKSGFTPLHLSISSTS-ETAAILIR-----NTNAVINIKSKVGLTP 644

Query: 126 MHLAALGNQV 136
           +HLA L N +
Sbjct: 645 LHLATLQNNL 648

[Close]

BLAST of CmoCh19G004030 vs. ExPASy Swiss-Prot
Match: Q810B6 (Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-06
Identity = 29/90 (32.22%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 14  EGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGGMDDILAKFLTSCP 73
           EG TP+H+A+ N  +  +  LI      +S + R+GLTP   A +   +      L    
Sbjct: 802 EGRTPVHVAISNQHSVIIQLLISHPNIELSVRDRQGLTPFACAMTYKNNKAAEAILKRES 861

Query: 74  KSIKQLTNRNESALHIAVKSEDIESVKILL 104
            + +Q+ N+  + LH+AV++ DIESV  L+
Sbjct: 862 GAAEQVDNKGRNFLHVAVQNSDIESVLFLI 891

[Close]

BLAST of CmoCh19G004030 vs. ExPASy TrEMBL
Match: A0A6J1EZQ6 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC111438058 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMHLAALGNQVE
Sbjct: 177 EGNNAMHLAALGNQVE 192

[Close]

BLAST of CmoCh19G004030 vs. ExPASy TrEMBL
Match: A0A6J1I6V2 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470533 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 129/136 (94.85%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGY+PIHLALQNNQTKTVLRL+DIDRDLV  QGREGLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGREGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHI VKSEDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIVVKSEDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMHL ALGNQ+E
Sbjct: 177 EGNNAMHLVALGNQIE 192

[Close]

BLAST of CmoCh19G004030 vs. ExPASy TrEMBL
Match: A0A6J1I835 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111471792 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGY+PIHLALQNNQTKTVLRL+DIDRDLV  QGR+GLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVK EDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMH  ALGNQ+E
Sbjct: 177 EGNNAMHRVALGNQIE 192

[Close]

BLAST of CmoCh19G004030 vs. ExPASy TrEMBL
Match: A0A6J1I885 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470572 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGY+PIHLALQNNQTKTVLRL+DIDRDLV  QGR+GLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVK EDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMH  ALGNQ+E
Sbjct: 177 EGNNAMHRVALGNQIE 192

[Close]

BLAST of CmoCh19G004030 vs. ExPASy TrEMBL
Match: A0A6J1IAU0 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111471791 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGY+PIHLALQNNQTKTVLRL+DIDRDLV  QGR+GLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVK EDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMH  ALGNQ+E
Sbjct: 177 EGNNAMHRVALGNQIE 192

[Close]

BLAST of CmoCh19G004030 vs. NCBI nr
Match: XP_022931783.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 2.8e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMHLAALGNQVE
Sbjct: 177 EGNNAMHLAALGNQVE 192

[Close]

BLAST of CmoCh19G004030 vs. NCBI nr
Match: XP_023553682.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNP+GY+PIHLALQNNQTKTVLRLIDIDRDLVS QGREGLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPDGYSPIHLALQNNQTKTVLRLIDIDRDLVSIQGREGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVK+EDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKNEDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMHLAALGNQVE
Sbjct: 177 EGNNAMHLAALGNQVE 192

[Close]

BLAST of CmoCh19G004030 vs. NCBI nr
Match: XP_022971840.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67
Identity = 129/136 (94.85%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGY+PIHLALQNNQTKTVLRL+DIDRDLV  QGREGLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGREGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHI VKSEDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIVVKSEDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMHL ALGNQ+E
Sbjct: 177 EGNNAMHLVALGNQIE 192

[Close]

BLAST of CmoCh19G004030 vs. NCBI nr
Match: XP_023511575.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRL+DIDRDLVS QGREGLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLVDIDRDLVSIQGREGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIK+LTNRNESALHIA+K+EDIESVKILLQWIQ+TCM SILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKELTNRNESALHIAIKNEDIESVKILLQWIQKTCMASILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMHLAAL NQ+E
Sbjct: 177 EGNNAMHLAALENQIE 192

[Close]

BLAST of CmoCh19G004030 vs. NCBI nr
Match: XP_022973225.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 5.5e-66
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           MRLKPSLAKKLNPEGY+PIHLALQNNQTKTVLRL+DIDRDLV  QGR+GLTPLHIAASGG
Sbjct: 57  MRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASGG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMTSILNWCDD 120
           MDDILAKFLTSCPKSIKQLTNRNESALHIAVK EDIESVKILLQWIQQTCMTSILNWCDD
Sbjct: 117 MDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCDD 176

Query: 121 EGNNAMHLAALGNQVE 137
           EGNNAMH  ALGNQ+E
Sbjct: 177 EGNNAMHRVALGNQIE 192

[Close]

BLAST of CmoCh19G004030 vs. TAIR 10
Match: AT4G10720.1 (Ankyrin repeat family protein )

HSP 1 Score: 124.0 bits (310), Expect = 9.8e-29
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           M LKPS A+KLN  G +P+HLA++  QT+ VL L+ +D DLV  +GREG+TP H     G
Sbjct: 57  MNLKPSFARKLNTYGLSPLHLAIEEGQTRLVLSLLKVDSDLVRLRGREGMTPFHQVVRRG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMT-------S 120
             D++ +FL +CP  IK      E+ALHIAV ++  E +++LL W+Q+   T        
Sbjct: 117 ETDLMTEFLLACPGCIKDANVNGETALHIAVSNDRYEELEVLLGWVQRLRQTDAESLEMQ 176

Query: 121 ILNWCDDEGNNAMHLAALGNQ 135
            LN  D +GN A+H+AA  N+
Sbjct: 177 FLNKRDQDGNTALHIAAYQNR 197

[Close]

BLAST of CmoCh19G004030 vs. TAIR 10
Match: AT4G10720.2 (Ankyrin repeat family protein )

HSP 1 Score: 124.0 bits (310), Expect = 9.8e-29
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           M LKPS A+KLN  G +P+HLA++  QT+ VL L+ +D DLV  +GREG+TP H     G
Sbjct: 57  MNLKPSFARKLNTYGLSPLHLAIEEGQTRLVLSLLKVDSDLVRLRGREGMTPFHQVVRRG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQTCMT-------S 120
             D++ +FL +CP  IK      E+ALHIAV ++  E +++LL W+Q+   T        
Sbjct: 117 ETDLMTEFLLACPGCIKDANVNGETALHIAVSNDRYEELEVLLGWVQRLRQTDAESLEMQ 176

Query: 121 ILNWCDDEGNNAMHLAALGNQ 135
            LN  D +GN A+H+AA  N+
Sbjct: 177 FLNKRDQDGNTALHIAAYQNR 197

[Close]

BLAST of CmoCh19G004030 vs. TAIR 10
Match: AT5G54620.1 (Ankyrin repeat family protein )

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-27
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           M LKP+ AKKLN +G +P+HLA++N+Q +  L L+ I+ DLV   GR+G+TPLH+    G
Sbjct: 57  MVLKPTFAKKLNSDGVSPLHLAVENHQVQLALELVKINPDLVLVAGRKGMTPLHLVVKKG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQ-------TCMTS 120
             ++L +FL +CP+SIK      E+ALHIAV ++  E +K+L  WI +       +    
Sbjct: 117 DANLLTEFLLACPESIKDTNVNGETALHIAVMNDRYEELKVLTGWIHRLHKSDAASTEIH 176

Query: 121 ILNWCDDEGNNAMHLAALGNQVEDF 139
           +LN  D +GN  +HLAA  N  + F
Sbjct: 177 VLNKRDRDGNTILHLAAYKNNHKAF 201

[Close]

BLAST of CmoCh19G004030 vs. TAIR 10
Match: AT5G54610.1 (ankyrin )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           M LKPS AKKLN  G +P+HLA++N+Q +  L L+ +D  LV  +GR G+TPLH+ A  G
Sbjct: 57  MILKPSFAKKLNEYGLSPLHLAVENDQVELALELVKVDPSLVRIRGRGGMTPLHLVAKKG 116

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKSEDIESVKILLQWIQQ-----TCMTSIL 120
             D+L  FL +CP+SIK +    E+ LHI + ++  E +K+L  W+Q+          +L
Sbjct: 117 DVDLLTDFLLACPESIKDVNVNGETILHITIMNDKYEQLKVLTGWMQKMRDSDDVFIDVL 176

Query: 121 NWCDDEGNNAMHLAALGN 134
           N  D  GN  +HLAA  N
Sbjct: 177 NRRDRGGNTVLHLAAYEN 194

[Close]

BLAST of CmoCh19G004030 vs. TAIR 10
Match: AT5G15500.2 (Ankyrin repeat family protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.3e-24
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 1   MRLKPSLAKKLNPEGYTPIHLALQNNQTKTVLRLIDIDRDLVSRQGREGLTPLHIAASGG 60
           M LKPS A+KLN +G TP+HLA+++     VL ++ +D  LV  +GR G+TPL +A S  
Sbjct: 58  MNLKPSFARKLNADGLTPLHLAVEHGHFWLVLEVVKVDPSLVRIKGRHGMTPLLVAVSRK 117

Query: 61  MDDILAKFLTSCPKSIKQLTNRNESALHIAVKS----EDIESVKILLQWIQQTCM----- 120
             D++++F   CP+SI       E+ALHIAV +    E +  +K+L+ WI + C      
Sbjct: 118 KIDLMSEFFLGCPESIVDANVNGENALHIAVNNYDQREGLSVLKVLMGWILRLCQKDAEW 177

Query: 121 --TSILNWCDDEGNNAMHLAA 131
             T ++N  D +GN  +HLAA
Sbjct: 178 IETRVINRRDKDGNTPLHLAA 198

The following BLAST results are available for this feature:

BLAST of CmoCh19G004030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH5	1.7e-25	42.75	Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 P...	[more]
Q6AWW5	4.9e-09	28.03	Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9C7A2	8.4e-09	30.08	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 P...	[more]
Q02989	1.3e-06	26.15	Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus OX=6925 ...	[more]
Q810B6	3.9e-06	32.22	Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2	[more]

BLAST of CmoCh19G004030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZQ6	1.4e-70	100.00	ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1I6V2	1.8e-67	94.85	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1I835	2.7e-66	93.38	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1I885	2.7e-66	93.38	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IAU0	2.7e-66	93.38	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CmoCh19G004030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931783.1	2.8e-70	100.00	ankyrin repeat-containing protein BDA1-like [Cucurbita moschata]	[more]
XP_023553682.1	3.5e-68	97.06	ankyrin repeat-containing protein BDA1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971840.1	3.8e-67	94.85	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]
XP_023511575.1	2.5e-66	93.38	ankyrin repeat-containing protein BDA1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973225.1	5.5e-66	93.38	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]

BLAST of CmoCh19G004030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10720.1	9.8e-29	43.26	Ankyrin repeat family protein	[more]
AT4G10720.2	9.8e-29	43.26	Ankyrin repeat family protein	[more]
AT5G54620.1	3.2e-27	42.07	Ankyrin repeat family protein	[more]
AT5G54610.1	1.2e-26	42.75	ankyrin	[more]
AT5G15500.2	7.3e-24	39.72	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 14..43 e-value: 0.4 score: 19.7 coord: 82..111 e-value: 500.0 score: 7.2 coord: 48..78 e-value: 0.76 score: 18.8
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 48..69 score: 8.70963
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 14..46 score: 8.789761
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 13..66 e-value: 2.4E-7 score: 31.2 coord: 68..135 e-value: 1.1E-6 score: 29.1
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..144 e-value: 1.3E-23 score: 85.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 15..136
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 1..134
None	No IPR available	PANTHER	PTHR24128:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 1..134
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 48..69 score: 8.613973

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004030.1	CmoCh19G004030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding