CmoCh19G003740 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh19G003740
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
LocationCmo_Chr19: 3551346 .. 3562604 (-)
RNA-Seq ExpressionCmoCh19G003740
SyntenyCmoCh19G003740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAAACACATCGCACTTCGACTCGGGGTGAGGCCGGCACTCGGCCCTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCGCTGGTTTTTGGAATTCGATAGATTTCAGTGTTTTCACACCATCGATCGACATCGACTCATCTCAATCTTGAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCATCAAGTCTTTTCCGGCTGACGACTCGTAGGAGGTGAGAAGGGCCTTGACTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCAACAGAAGTACGAAATTCTGATTGTTCAGAGAATCAGATCGGTTCTATTAAGGACAGGTGATGACCAATCAAACTCGGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGACTACAGAGCCCTCATTATGGGGAGGGTAAAGAGCTTCCAACGCAAAGCGGCCTTTCATTCCCTTGTTTCGTCATGGCACACCCCACACACAAGCACCACACGGCTCAAGGGAGACCAGAAAACGCCTTTCGGTTTACCCACGGCCCTTGCCGCCTTCCTTAACAAGCCCTCGAGCCTCCTTTGCACCGCCTTCCTCATAGAAGCCACCGGGTTGACCCCTCAGGACGAATTCTATGGTCGAGAACGCTGTAATAAGAAATTGGCCATGAGAGAACCTGAGAAGTATTACAAAAGAAAAGGACTGATGATAGAGCTGGGCGGGGAGGCGAGACTAGTTATCAGGTCAGAGAGACGCCTGGCCCCGAAGCTGGCCCCCTTAAAACCCCATTACTTAATAAGGATTTCTTACGCGCCATATGCCGACTACTTACTACTGGGAATCGTGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCTCACTTCCTACAATCCGGCCTGAACCTTGGGTAGGCTTTGCAGGAACAACAACAATAGCTGCACGGAGTACAGTAGAATTCCCTAGTACCATCATTCGGGAAGTCCCTCCGAGGATGACTCCCATACAATCTTGCGAGAGCTCGAGAAGCGTCTACGGGTAAAGCACCGTATCCATATAACTGCTTGCCACCTACGCTACGCCATCCATTCAAACTTGACGAACCTAGGTAATAATATCCCGATAAAAGAGCTGACGAAGGGGATAAGCCAAAGAGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACAGCTGGAGTAATCCGTCCCCAAGTGAGCGTATTATGGGGGACCGTCAAGCACATCCGGCAAAGATCAAGGGGGATCTCGTTGTTGCATAGCTCAGGTCGGAGCAAGGCCCCATCGGACGTTCAAGAGGTAGTTTCACGATCGGGCATGAGTGACGGGAAGTTGTCATTGTATACTCCTGCGGGTCGGAAGGTGGCGGGGGAAAGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCCATACATCTCGAGGCGCCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTCTCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTCCTTGACGAACGTCATCGACGAAGACATCGTAAATTGGTCCGCGGGCATCGCAATCAGTCTTCTGTCCTACTACAAGTGCTGCGACAACCTTTACCAAGTCTGAACGATTGTCGACCACCAGATCCGCTGGTCTGCTATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCAGAATATAATCCCAAAGTACTCCAAAGACCCAAATATAGTCAATCAAGAAGGGGGTCAGATTGAAGCAGAGTTCCCCAACAGCATAGAGCTGGGGAAGCTCGGACCCGGTCAAGATCCAAACCACTACTAGACTAGACGTTGAGTGAGGTAGTGGGTTTTTCTATTAGTTGCGATGCGAACAGGCGTTTACTTATTTGAGATTTGTTGAGTAGGCTTGCCTTAGTTGTCTGCTATAAGATAGCTAGTTTTGGGGCTTTCGACATCAAAAAGCCGATCCGGCTTCGCTATCGCTCATGACTTGTATTGTAGTCCTAGTCTTGTAGTCGGCCTGGAATGCCTTTGTAGTCTTTCTAATGCGTCTGCCTTCTTCCTTCATTCATTTGCTTTTAGTTGCGGTAGCTCCCGTACCAGCAAGATAGAGACGGCGAAGCCAAAGCAATACTAAACGAGCAGCCGCCCTAACGAGACTCTTAGTCAAGCCTAAACGTCCTTATTTCAAACTAAAGCGCTAACGAGCAAGAAAAGAAAAGGCCCCTGACTATAGAGAGAGTAAGGCCCCTTTACTAATATTCTAATAGTTGGCCCGGACGCTTCTGGCTACTAGCTTCTACCGCTAGCGCTTGGACTTGGAAGCAAGCTACAGTTACCTTGAATCAATCAATGAATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGACCCGTTGGTCAAAGGAAAGGGTAGGTCCTGATCTGATGCCGGGACGGAGCCGTATGAGGCGAGAGTCTCACGTACGGTTCCTTTGAGAAGGGTGTGATACCACCACCTATCAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAGGATCCTGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTCTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCTTAGTTTCTCGTGTTTCAGTCACCTTTCAATGGCTCCCTTAATTATGTGCGAGGAATTTCCCTCGTCGAGTAATGGGAAGCGGGCTAGTCCCCGAAAATGCCCATTCCTTTGTCGTTGGGGCCCAAAATCTTCCTTGCTGAGACTTGGAGTCTTGTAAGATTGTGCACTTGAAAAGACCTTTAGAGAAAGAGATGAACCCGACCCAACCAAGAAATTACTCCGAGGAAGAACAAAGAAGTGCATAAAGCTAACCCATCTAACGAGTAAAGAGCTAACCATATTCTAGTATATGTTGAAAGAGAAAGGAGACCAAAATCTCGAAGCTGATTCAAGGCCTTTTTATGATCTTCTACGAGGCCTTTACTCGTTAAAGGTAGAACTACAAGAAGCAAGAGGAACTATCAAGACGAGGAGTATCTCAAGGAATAGCTTTCCCTAAAGAAAGAAGAAAGACCACCTATTTACTCAAGAGGTAGTGGAGGCCAACTAGCAATTCAAGAAAATGAGTTTGCTTATTGATCCAACCAAGTAAGCATTAAAATCTTCTATCGACTGGGTTACTTCAAATCTGACTAAAATGAAAAGGTAAACCAACCACCGTTTTGGAACTCCATCTTTCTGCTGTTTTTCCTCTTCTATTTAATTAGAGTTTTTTTCTTTTAGGTTGTGTATGGACTGCATCAATTTCCCTCCTGTTGGAAAGGATTCGGCTTCAACAACAAGATCAACAAAACAAAAACAGAAGAATAGGAAAAAAGGGGTGAGATCAAAGTTTCTAACTTTCTGAACTACGATGAAAAGTCTTCAATATACCATGAATAGGCTCTTAGGTCAAAACCCCATGTAAGTCACCCGCATACCAATGGCTTTAAGCCGAACCTTATACTTGATGAGAAACTTCAGGCATGAACACCTGCTTTGGCATAGCTTGCACTCTCTTTATTCGCCACAGAACATCCACCTTTCGTCTGTAACGTGTATTTTTTGCTTGTTTGGATCCTGTCGAGTGAAAGCCAATACGTTTTCCGAAGGGGGTTTTGAAAAAAAGGCCTACCCCAGGAAATGTTGAAGTTGCGCATTTAGTAGTCTCTATCTTACGGTCGGAGACAAGGGATGGATGTCGCTAGGCTAGGGCAACTCTATCATTGGTTTCATTATCCCTATAACGATCACTAAATAAAGATATGTGCTACTACGAGACCGATGCTGCGAAGCTAGGTGGTCCTATTTTTTGCTTGTTTATTTGATTTTTGCTGCTGCTATTAGTGAAAAAGGTCTTACGAACTTTGACCCCTATGGTGGATAGAATTTCTTTTCTTGAAGCTCTAGCTATTAGTTCAAAAGCGATTACGAAACTTGACAGTCGTAAAGCATCAACTCTAGAATAAAAGGTCCTTACACGAAAAAGAGTGAAATCTGTCTCATTCATCTCTTTTACCGACTGTAAAGGTTCAGTCTCTCTCTTTCCTTTCTTTCTTGCTTGCTTGCTTTCACTCCTTCGCCTATTGATTCTATCACAGTAAACTCCTTCCTGGACTATTACTTCCTCGGTAAATGGAATAGAAATGGGTGGGTGTTGAACTCGGTCTCCCAGCTCCGCTCCTGCTCGCTTCTTTACTTCAGTCTGAGGATCCTCGATATGTTGATCCCCTCCCCTATCAGCTCATGATATTCTTTTTTCAGTATGTTCTTGGTCAGAGTGATCTATATCCTCCGGGCAACGAAGTGAGGGCTATCGAGTTGGGTTTCTTTACGCATTGCAGCTTTGTTTTGTTGGGATCTTGGCCTGGGGTCAGGTCCACTTCGAGAATGGCTTGGGGTACCAGTGCCCAAAAAGAAAAAGCACCTACTATAAGGGACATGGTGAGCATAAGATCGAGGGAGCTCTTATAAGGCCAGTGAATAAGGTTCGAAACCCAATATGAAAAGATATCTGCTAAACATCAGGTATTTCTCGAAACCCAATATGGATGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTTGACCAATGGCAGGCCGATCCAATGCTCGAACTGTGGGAAGAGAGGACACCTGAGCAGAAATTGCTGGAGCAAGCTGAGGAATAAGGAGAAGAGGTCGAAACGGCCCATGTGGCTCAATCCGAGGAGGACGAGCCAGCTCTCTTCATGGTAACTGCCATGCGTTGACCAATGGCAGGCCGATCCAATGCTCGAACTGTGGGAAGAGAGAGGGTCCTCCTCCAGCCGCAAAGGCGGTAAGAAGCCATGGATGTCTCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTTGACCAATGGCTGGCCGATCCAATGCTCGAACTGTGGGAAGAGAGGACACCTGAGCAGAAATTGCTGGAGCAAGCTGAGGAATAAGGAGAAGGCCGAAACGGCCCATGTGGCTCAATCCGAGGAGGAAGAGCCAGCACTCTTCATGGTAACTGCCATGCGTTGACCAATGGCAGGCCGATCCAATGCTCGAACTGTGGGAAGAGAGGACACCTGAGCAGAAATTGCTGGAGCAAGCTGAGGAATAAGGAGAAGGCCGAAACGGTCCATGTGGCTCAATCCGAAGAGGACGAGCCAGCTCTCTTCATGGTACTGCCATGCGTCCCCAATTTCGATTCCAAATCCGACGACGATGTTGAACCCAAGAAAGAGCTCCAGTTGGGCGTAGCAAAGATGGCACCAGCTGGGGAGCTAATTCAACTGGAGGAGGAGCGAGTGTTCGCTCAGATCGGCGAGAGGGACGAGCAACACGAGCACCAGCAATGGATCCTTGACACAGGGGCAACAAACCATATGACCGGGGCTAGATCTGCGTTCTCCGAGCTCGACTCGGGGATCCATGGGACAGTGAAATTCGGCGATGGCTCCGTCGTCGAGATCGAAGGGTGCGGCACCATCCTGTTCCTCAGTAAGGGAGGCGAGCATCGCAAGCTGACCGACGTCTACTTCATCCCTAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAACTCGATGAGACAGGTTGCTTCATTTCCATCGAGCGCAGACTACTGAAAATCTGCGATAATCAACGACGGCTGCTCACGCAGGCAAGGCGCACCACAAACCATCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCAGCAAACAGAGGCGCACACCCTTTCCATCTCGAACAGCCTACCGAGCCGATGAGCCGTTGGAGCTTGTACACGGCGATATCTGCGGGCCCATCAAGCCTGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGATAAAAGCCGCTTCATGTGGCTGACTCTGCTGCAAGCGAAAAGTGAGACGGCAGAGGCGGTTAAGCGCATTAAAGCGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACAGACCGAGGCGGAGAATTCACCTCGGCAAGTTTTAGTAAGTACTGCCACGAGATCGGCATACAACAGCACCTAACGGCACCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCTCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTAGGGAGAGGCAGTAATGACGGCTGTCTATCTCCTCAATGGGTCACCAACCCGAAGCCTCGACAGGAAGACGCCATATGAGGCCTGTTACAACAAAAAACCAACAGTACATCATTTTTGCGTGTTCGGCTGCGTCGCATACATGAAGGTAACACGTCCCCATCTCGCCAAGCTCGATCCCAGGGGGCTGAAGGTCGTCTTCATCGGCTACGAACCCGGGAGCAAGGGGTACAGACTCTATGATCCTGTAGGGGGGCGAGCTCACGTGTCGCGCGACGTCGTCTTCGACGAAAGCACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACCAAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGTAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTAGAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACCAGCAGCGCGCGAGCTCGAAGAAGTGGCCGAACTACATGCCGTCAGTGCAGATGATCCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAGGAGATGACATCCATCACTGATAACCAGACGTGGAGTCTGGAGGATATGCCACTGGGACACCGAGCCATAGGGCTCAAATGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAGGGCTACGTCCAGAAGCAAGGAGTGGACTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCTTGCTGGCAATTGCAGCACATCACTCTTGGGAGGTTCATCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGATGGAGGCCGTCTATGTTCAACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCCACAAGCCCCACGAGCTTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGCCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCAGAAGGTTCAAGAAGGAGATGTCGAAAAACTTTGAGATGAGCGATCGCGGTGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGGAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATTCTACCAGGACACCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGACACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCTAATCTTGCTTATTCTGTTGGCTATGTGAGCAGGTTTATGGAAGCACCTAAGGAGGAGCATCTAGTGGCTGTCAAGCGCACCCTGCGCTATGTAGCCGGAACTAGAGGCTGGGGTGTGAGATATTGTGCAGGGAGCGGAAAGGAGAAACTCAAGCTGGTCGGCTACAGTGATAGTGACATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCAGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATCGTAAGAGCACCAGCAGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTGGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACACAAGGGATCTGGCTTGCACGACTAATGGAAGAACTCATCGGGAGAGAAAGTGATCCACCAATGCTATACGTAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAGATTGATTTCATCCGAACAGAGGAACAACTTGGAGACATTTTCACCAAGTCCCTGGCGCGGGTGAAATTCGAAGAACTACGTTCAAAGATCGGAGTTCAAATAATAAGGTACAGCTTTTAGGAGGAGATTGTTAAATAAAAGCCATGCCTTATTTAGTTACATCTTAATTCACGCGAATGGAGAAGCGTGATTCTAGGAGCCATTGTTTTGGCAATTTGGGCGAAGTCTTCGTCCACTTCTTCTATTTTTGTATATTTGTTTTTTTTATTTTTGTAATTAGATTTGTTATTTAAACCGTTCAACTGAAGTAAAATAAAAACATCGAGTCTTCAGCATTATCAGCGAATCTCTCACTCTCTCTCCTTTTACTTCCGCTAATTTTTCCTTCGAAGAAACCTTCGGCCAATTTTTCGTCGACACTGTCTTCCGAATTGCCAGAGTCAACAAACTGGACTTTTGTCAATATAGTTGCGAGTAGCTCGAAACCAGCAATAGAAAGGATTTAGGGGGAAGAGTTCCGGTCCGGCGATGACTACAAGAAAGACAAGAGAGCGCGATGATAAAGAGAATTTCTATTTCATTTACCACCGAAAATCAGGTATGGTTGTGCGGGCAGTCAGAAGAGGAGAAATTCCTTTTTATGGGTTGGTGTCTCCTATTTACTTTGTCTCATCGTGGATTGGATGAGAGTGCTGTTTTTTGGGCCTTGCTCTCAAAGCAAAGATGGGATACTCCGGTACGACGCGAACCATATTCATATAAATATCATTTCTTAAATGGACAGGTTGGAAGGCTGGCTCTTGTTCTGTTTTTAGCCGTGAAAGCGGGGAACTCTCTTCCAAGAGATTTGCTCTTGTATGGAAGAAGCTGGCCGTCTTCAGGCACATCAAGCTAATTCCCTGGACTGGGAGAAAAGGAATCTTCATACTAACACTAATCCGACTGTCTTCTAACTATCAGGTTTCGCTGTCGAGCCCATGCCTGGGCATCCCAAGTTAAGCCCCTTTTACTCGCTTAGATGCTACGCTCTATCCTTCAATCGATTGAGCCTGTCCTCTTTGGGGATTCTACTCTAAGCCTGGAAACAAACCCATCTCTTCTTTTCGCTGGCTGGGAAGTTCCTTACATGAATGGGCAACCACCCACCCTAGCCTGTCTAAGTCAATCTCCACTATCAGCGGAATGTCGAGCTACTTCTTTAGGATTGCGCACTGACCTTATCCTTCTGACCTACGAGCCAGCCAAGAATTAA

mRNA sequence

ATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAAACACATCGCACTTCGACTCGGGACATCGTAAATTGGTCCGCGGGCATCGCAATCAGTCTTCTGTCCTACTACAAGTGCTGCGACAACCTTTACCAAGTCTGAACGATTGTCGACCACCAGATCCGCTGGTCTGCTATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCAGAATATAATCCCAAAAGGATCCTGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTCTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGTATGTTCTTGGTCAGAGTGATCTATATCCTCCGGGCAACGAAGTGAGGGCTATCGAGTTGGGTTTCTTTACGCATTGCAGCTTTGTTTTGTTGGGATCTTGGCCTGGGGTCAGGTCCACTTCGAGAATGGCTTGGGGTTGGAAGGCTGGCTCTTGTTCTGTTTTTAGCCGTGAAAGCGGGGAACTCTCTTCCAAGAGATTTGCTCTTGTATGGAAGAAGCTGGCCGTCTTCAGGCACATCAAGCTAATTCCCTGGACTGGGAGAAAAGGAATCTTCATACTAACACTAATCCGACTGTCTTCTAACTATCAGATGCTACGCTCTATCCTTCAATCGATTGAGCCTGTCCTCTTTGGGGATTCTACTCTAAGCCTGGAAACAAACCCATCTCTTCTTTTCGCTGGCTGGGAAGTTCCTTACATGAATGGGCAACCACCCACCCTAGCCTGTCTAAGTCAATCTCCACTATCAGCGGAATGTCGAGCTACTTCTTTAGGATTGCGCACTGACCTTATCCTTCTGACCTACGAGCCAGCCAAGAATTAA

Coding sequence (CDS)

ATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAAACACATCGCACTTCGACTCGGGACATCGTAAATTGGTCCGCGGGCATCGCAATCAGTCTTCTGTCCTACTACAAGTGCTGCGACAACCTTTACCAAGTCTGAACGATTGTCGACCACCAGATCCGCTGGTCTGCTATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCAGAATATAATCCCAAAAGGATCCTGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTCTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGTATGTTCTTGGTCAGAGTGATCTATATCCTCCGGGCAACGAAGTGAGGGCTATCGAGTTGGGTTTCTTTACGCATTGCAGCTTTGTTTTGTTGGGATCTTGGCCTGGGGTCAGGTCCACTTCGAGAATGGCTTGGGGTTGGAAGGCTGGCTCTTGTTCTGTTTTTAGCCGTGAAAGCGGGGAACTCTCTTCCAAGAGATTTGCTCTTGTATGGAAGAAGCTGGCCGTCTTCAGGCACATCAAGCTAATTCCCTGGACTGGGAGAAAAGGAATCTTCATACTAACACTAATCCGACTGTCTTCTAACTATCAGATGCTACGCTCTATCCTTCAATCGATTGAGCCTGTCCTCTTTGGGGATTCTACTCTAAGCCTGGAAACAAACCCATCTCTTCTTTTCGCTGGCTGGGAAGTTCCTTACATGAATGGGCAACCACCCACCCTAGCCTGTCTAAGTCAATCTCCACTATCAGCGGAATGTCGAGCTACTTCTTTAGGATTGCGCACTGACCTTATCCTTCTGACCTACGAGCCAGCCAAGAATTAA

Protein sequence

MVLESIYDPEFPNTSHFDSGHRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVLGQSDLYPPGNEVRAIELGFFTHCSFVLLGSWPGVRSTSRMAWGWKAGSCSVFSRESGELSSKRFALVWKKLAVFRHIKLIPWTGRKGIFILTLIRLSSNYQMLRSILQSIEPVLFGDSTLSLETNPSLLFAGWEVPYMNGQPPTLACLSQSPLSAECRATSLGLRTDLILLTYEPAKN
Homology
[Close]
BLAST of CmoCh19G003740 vs. ExPASy Swiss-Prot
Match: Q01300 (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.4e-20
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV 127
           K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Sbjct: 261 KKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV 312

[Close]
BLAST of CmoCh19G003740 vs. ExPASy Swiss-Prot
Match: Q01148 (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.4e-19
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV 127
           K+I  SIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Sbjct: 261 KKIPCSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV 312

[Close]
BLAST of CmoCh19G003740 vs. ExPASy Swiss-Prot
Match: P31839 (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.1e-18
Identity = 45/49 (91.84%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA 124
           K+I GSIWFSIKVI FLFLYIWVRAAFPRYRYDQLMGLG KVFLPLSLA
Sbjct: 267 KKIPGSIWFSIKVIFFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLA 315

[Close]
BLAST of CmoCh19G003740 vs. ExPASy Swiss-Prot
Match: P92558 (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE=1 SV=4)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA 124
           K+I GSIWFSIKV+ FLFLYIWVRAAFPRYRYDQLMGLG KVFLPLSLA
Sbjct: 261 KKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLA 309

[Close]
BLAST of CmoCh19G003740 vs. ExPASy Swiss-Prot
Match: P26845 (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 PE=3 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-15
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 77  ILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA 124
           I GSIWFSIKV+ FLF+YIWVRAAFPRYRYDQLM LG KVFLPLSLA
Sbjct: 266 IPGSIWFSIKVLFFLFVYIWVRAAFPRYRYDQLMRLGWKVFLPLSLA 312

[Close]
BLAST of CmoCh19G003740 vs. ExPASy TrEMBL
Match: A0A6S7LK19 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS9097 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-19
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 21  HRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPK 76
           HRKLVRGHR++SSVLLQV RQPLPS NDCRPPDPLVC IHP PQAQILGAEYNPK
Sbjct: 464 HRKLVRGHRDKSSVLLQVPRQPLPSPNDCRPPDPLVCNIHPGPQAQILGAEYNPK 518

[Close]
BLAST of CmoCh19G003740 vs. ExPASy TrEMBL
Match: A0A5A7TVE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78538G00010 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-18
Identity = 57/87 (65.52%), Postives = 61/87 (70.11%), Query Frame = 0 

Query: 51  PPDPLVCYIH---PSPQAQILGAEYNP-------KRILGSIWFSIKVILFLFLYIWVRAA 110
           PPD     +H   P P   +    + P       K+I GSIWFSIKVILFLFLYIWVRAA
Sbjct: 34  PPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 93

Query: 111 FPRYRYDQLMGLGRKVFLPLSLARYVL 128
           FPRYRYDQLMGLGRKVFLPLSLAR VL
Sbjct: 94  FPRYRYDQLMGLGRKVFLPLSLARVVL 120

[Close]
BLAST of CmoCh19G003740 vs. ExPASy TrEMBL
Match: A0A2Z1U7X0 (NADH-ubiquinone oxidoreductase chain 1 OS=Cynomorium coccineum OX=51503 GN=nad1 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-18
Identity = 54/73 (73.97%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 54  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLG 113
           PL   + P     IL    + K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLG
Sbjct: 240 PLCTLLFPGGWPPILDLPIS-KKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLG 299

Query: 114 RKVFLPLSLARYV 127
           RKVFLPLSLAR V
Sbjct: 300 RKVFLPLSLARVV 311

[Close]
BLAST of CmoCh19G003740 vs. ExPASy TrEMBL
Match: A0A2Z1UA77 (NADH-ubiquinone oxidoreductase chain 1 OS=Cynomorium coccineum OX=51503 GN=nad1 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-18
Identity = 54/73 (73.97%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 54  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLG 113
           PL   + P     IL    + K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLG
Sbjct: 240 PLCTLLFPGGWPPILDLPIS-KKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLG 299

Query: 114 RKVFLPLSLARYV 127
           RKVFLPLSLAR V
Sbjct: 300 RKVFLPLSLARVV 311

[Close]
BLAST of CmoCh19G003740 vs. ExPASy TrEMBL
Match: E9KZL0 (NADH-ubiquinone oxidoreductase chain 1 OS=Vigna radiata var. radiata OX=3916 GN=nad1 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.7e-18
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV 127
           KRI GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Sbjct: 261 KRIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV 312

[Close]
BLAST of CmoCh19G003740 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 99.8 bits (247), Expect = 4.1e-21
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV 127
           K+I GSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Sbjct: 261 KKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV 312

[Close]
BLAST of CmoCh19G003740 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 99.8 bits (247), Expect = 4.1e-21
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV 127
           K+I GSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Sbjct: 261 KKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV 312

[Close]
BLAST of CmoCh19G003740 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 99.8 bits (247), Expect = 4.1e-21
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 75  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV 127
           K+I GSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Sbjct: 261 KKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV 312

[Close]
BLAST of CmoCh19G003740 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 42.7 bits (99), Expect = 6.0e-04
Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = 0 

Query: 1  MVLESIYDPEFPNTSHFDSG 21
          MVLESIYDPEFP+TSHF SG
Sbjct: 23 MVLESIYDPEFPDTSHFRSG 42

The following BLAST results are available for this feature:
BLAST of CmoCh19G003740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q013003.4e-2094.23NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV... [more]
Q011486.4e-1990.38NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 ... [more]
P318397.1e-1891.84NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE... [more]
P925581.2e-1789.80NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE... [more]
P268452.5e-1587.23NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 P... [more]
BLAST of CmoCh19G003740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6S7LK191.3e-1989.09Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS9097 PE=4 SV=1[more]
A0A5A7TVE91.1e-1865.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2Z1U7X03.3e-1873.97NADH-ubiquinone oxidoreductase chain 1 OS=Cynomorium coccineum OX=51503 GN=nad1 ... [more]
A0A2Z1UA773.3e-1873.97NADH-ubiquinone oxidoreductase chain 1 OS=Cynomorium coccineum OX=51503 GN=nad1 ... [more]
E9KZL05.7e-1896.15NADH-ubiquinone oxidoreductase chain 1 OS=Vigna radiata var. radiata OX=3916 GN=... [more]
BLAST of CmoCh19G003740 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG01120.14.1e-2192.31NADH dehydrogenase 1B [more]
ATMG00516.14.1e-2192.31NADH dehydrogenase 1C [more]
ATMG01275.14.1e-2192.31NADH dehydrogenase 1A [more]
ATMG00520.16.0e-0490.00Intron maturase, type II family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPFAMPF00146NADHdhcoord: 75..127
e-value: 9.7E-15
score: 54.6
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPANTHERPTHR11432NADH DEHYDROGENASE SUBUNIT 1coord: 71..137
NoneNo IPR availablePANTHERPTHR11432:SF3NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1coord: 71..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G003740.1CmoCh19G003740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0006397 mRNA processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity