CmoCh19G003600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G003600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polygalacturonase-like
Location	Cmo_Chr19: 3217013 .. 3218850 (-)
RNA-Seq Expression	CmoCh19G003600
Synteny	CmoCh19G003600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCTATGGAACCTTAATGCTCATACTTTCCTTTTTGCTACTTCTGCTTTTGAACCATGTCTTGGCTGATGGATTAACCTTTGATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGTCTGTGCTTCAAACAGCATGGGTCAAGGCTTGTGACTCGACGGGACCAGCTACTATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGCTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCCTCGGAAATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGGAAAGGATCTGGCATATGGAATTGTAAACACTCTGGGAATAATTGTCCCGATGGAGCACGGGTATGCATTATTTAAGTTAGCTATATATAACAAAATTTAAAAATTTATCTTTAGGGGAAAGTTAAAAGAAAATATATGGTACTAATTGTTGCTTTTGATTGTTTTGAATTTGTAGAATCTTGAAATCATAAATGCACAAAATGTTATCATCAATGGATTAGCTTCAATTAATAGCCAAATATTTAACATTGTGGTGCACGGTTGCCGAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCAAACACTGATGGCATCCATGTGCAAGAGTCATCAGATGTGACCATCCTTAGTTCTAACATTGGTACCGGTGACGACTGCATCTCAATTGGTCCAGGAACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCATGGAATCAGGTACGTGACAACAAATAATTTTTGGAAATTATTTTGTTGGTATGAAAAATATATTTGAAATTATAAAACTAAATATAAAATTAGATTTCGAATGAATAAAAACACCGTTTTAGAAAAAGAATTTATCTTGAACATAGCTATTCATTGAATGTGTGTTTGTAGCATTGGGAGCTTGGGGAGGTCGTCGGATGAGCCTGGAGTGAAAAATGTGACAGTTACATCATCGACTTTTACCGGGAGTACGAATGGAGTGAGGATTAAGTCTTGGGCAAGACCAAGCAATGGGTTCGCTACGGATATTCATTTTCAACACATTACTTTGGATAATGTGAAGAACCCTATCATAATTGATCAAAATTACTGTCCACATGACAAAGGCTGCCCCCATCAGGTATATTTTCTCATTAATCCTCCACATGTTAACTTTTTACAAATTATATTTAACTTAAAATTTGATTAATAGAGATTAAATTTTAAATTTTAGAGGTAATTGATTTCCTTTATCTTCAACGAGTTGGAAGTTATCTTGTTCAATACGTGTGTTAAATTAGAAACATTACTTCGGCTACACTTTTGGGTAATGAATTGTGGTGGAGAATGTAACTTTCACATATCTTCAAAAGAGTGTTATATTATCCACTTTGATCATCGTAAGCTTTTATGGCTTTATTTTTTTGGTTTTCACATAAAAGATCTGTACCATTCGAGATAGTTGTCCTTATTCAATTTTCATGTCATATTTTGATTGTTCTTGTTTGCATGAATAGGATTCGGGAGTAAAAATTAGCGAAGTAACTTACGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAACCCAACAAATCCTTGCACCGGACTCACCTTGGAAGACATTAAAGTGACTTATAATGATCAAATCGCTAAAGCTTCATGCGAAAGTGCCAAAGGAACTGCTTCAGGTGTGGTTGAACCTGCTAGTTGCTTAGACTAG

mRNA sequence

ATGGCTCTCTATGGAACCTTAATGCTCATACTTTCCTTTTTGCTACTTCTGCTTTTGAACCATGTCTTGGCTGATGGATTAACCTTTGATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGTCTGTGCTTCAAACAGCATGGGTCAAGGCTTGTGACTCGACGGGACCAGCTACTATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGCTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCCTCGGAAATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGGAAAGGATCTGGCATATGGAATTGTAAACACTCTGGGAATAATTGTCCCGATGGAGCACGGAATCTTGAAATCATAAATGCACAAAATGTTATCATCAATGGATTAGCTTCAATTAATAGCCAAATATTTAACATTGTGGTGCACGGTTGCCGAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCAAACACTGATGGCATCCATGTGCAAGAGTCATCAGATGTGACCATCCTTAGTTCTAACATTGGTACCGGTGACGACTGCATCTCAATTGGTCCAGGAACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCATGGAATCAGCATTGGGAGCTTGGGGAGGTCGTCGGATGAGCCTGGAGTGAAAAATGTGACAGTTACATCATCGACTTTTACCGGGAGTACGAATGGAGTGAGGATTAAGTCTTGGGCAAGACCAAGCAATGGGTTCGCTACGGATATTCATTTTCAACACATTACTTTGGATAATGTGAAGAACCCTATCATAATTGATCAAAATTACTGTCCACATGACAAAGGCTGCCCCCATCAGGATTCGGGAGTAAAAATTAGCGAAGTAACTTACGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAACCCAACAAATCCTTGCACCGGACTCACCTTGGAAGACATTAAAGTGACTTATAATGATCAAATCGCTAAAGCTTCATGCGAAAGTGCCAAAGGAACTGCTTCAGGTGTGGTTGAACCTGCTAGTTGCTTAGACTAG

Coding sequence (CDS)

ATGGCTCTCTATGGAACCTTAATGCTCATACTTTCCTTTTTGCTACTTCTGCTTTTGAACCATGTCTTGGCTGATGGATTAACCTTTGATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGTCTGTGCTTCAAACAGCATGGGTCAAGGCTTGTGACTCGACGGGACCAGCTACTATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGCTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCCTCGGAAATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGGAAAGGATCTGGCATATGGAATTGTAAACACTCTGGGAATAATTGTCCCGATGGAGCACGGAATCTTGAAATCATAAATGCACAAAATGTTATCATCAATGGATTAGCTTCAATTAATAGCCAAATATTTAACATTGTGGTGCACGGTTGCCGAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCAAACACTGATGGCATCCATGTGCAAGAGTCATCAGATGTGACCATCCTTAGTTCTAACATTGGTACCGGTGACGACTGCATCTCAATTGGTCCAGGAACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCATGGAATCAGCATTGGGAGCTTGGGGAGGTCGTCGGATGAGCCTGGAGTGAAAAATGTGACAGTTACATCATCGACTTTTACCGGGAGTACGAATGGAGTGAGGATTAAGTCTTGGGCAAGACCAAGCAATGGGTTCGCTACGGATATTCATTTTCAACACATTACTTTGGATAATGTGAAGAACCCTATCATAATTGATCAAAATTACTGTCCACATGACAAAGGCTGCCCCCATCAGGATTCGGGAGTAAAAATTAGCGAAGTAACTTACGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAACCCAACAAATCCTTGCACCGGACTCACCTTGGAAGACATTAAAGTGACTTATAATGATCAAATCGCTAAAGCTTCATGCGAAAGTGCCAAAGGAACTGCTTCAGGTGTGGTTGAACCTGCTAGTTGCTTAGACTAG

Protein sequence

MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYNDQIAKASCESAKGTASGVVEPASCLD

Homology

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BLAST of CmoCh19G003600 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 8.6e-133
Identity = 225/384 (58.59%), Postives = 295/384 (76.82%), Query Frame = 0


Query: 11  LSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGT 70
           LS + + ++N  +A  LT+++ SLGAK DGKTD++    +AW KAC S  P  I+VP GT
Sbjct: 10  LSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGT 69

Query: 71  FYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVIDGKG 130
           F+++   F+GPCKNNAIT RI GTLVA S+ +V+     WI F  VNG++I GG++DG+G
Sbjct: 70  FFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQG 129

Query: 131 SGIWNCKH-SGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVS 190
           + +W CK   G +CP GA  L   ++ N++++GLAS+NSQ+F+IV++  +NV +QGV+VS
Sbjct: 130 TALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVS 189

Query: 191 DPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSL 250
             G+SPNTDGIHVQ SS VTIL+S I TGDDC+SIGPGT+NLWIE V CGPGHGISIGSL
Sbjct: 190 RSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSL 249

Query: 251 GRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQ 310
           G+  +E GV+NVTV + TF+G+ NG+RIKSW RPS GFA +I FQH T+ NV+NPI+IDQ
Sbjct: 250 GKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQ 309

Query: 311 NYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYND 370
           +YCP +KGCP Q SGV+IS+VTYEDI GTSATE+ VKFDC+P +PC  + LED+K+TY +
Sbjct: 310 HYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKN 369

Query: 371 QIAKASCESAKGTASGVVEPASCL 394
           Q A++SC  A GT  GVV+P SCL
Sbjct: 370 QAAESSCSHADGTTEGVVQPTSCL 393

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BLAST of CmoCh19G003600 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 9.6e-108
Identity = 201/388 (51.80%), Postives = 272/388 (70.10%), Query Frame = 0


Query: 8   MLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVP 67
           ++IL F L+  L H +    T +++S GAKPDG  D++     AW  AC S  P TI VP
Sbjct: 14  LIILDFTLISSLAHPIPS--TLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVP 73

Query: 68  IGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVI 127
            G F V +  F+G  CK   I+IRI G++VA  + +++A +K WI F+DV  +SI+GG++
Sbjct: 74  KGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGIL 133

Query: 128 DGKGSGIWNCKHS-GNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQG 187
           D +G+ +W CK++ G+NCP GA++L    + N+ I+GL SINSQ F+IV+    NVNI G
Sbjct: 134 DAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDG 193

Query: 188 VKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 247
           VKVS   +SPNTDGIHV+ S  V I +S IGTGDDCISIGPG+TN++I+++ CGPGHGIS
Sbjct: 194 VKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 253

Query: 248 IGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPI 307
           IGSLGR+ +E GV NVTV++  F G+ NGVRIK+W + SN FA +I FQHI +  VKNPI
Sbjct: 254 IGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPI 313

Query: 308 IIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKV 367
           IIDQ+YC H K CP Q+SGVK+S V YEDI GTS TE+ V  DC+   PCTG+ ++D+ +
Sbjct: 314 IIDQHYCLH-KPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNL 373

Query: 368 TYNDQIAKASCESAKGTASGVVEPASCL 394
               + A+ASC++A G+A+ VV    CL
Sbjct: 374 VSVHRPAQASCDNANGSANDVVPFTPCL 398

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BLAST of CmoCh19G003600 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-74
Identity = 150/375 (40.00%), Postives = 224/375 (59.73%), Query Frame = 0


Query: 22  VLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGTFYVQSGSFNGP 81
           V + G  F++   GAK  G  D S  +  AW  AC S GP+T+ +P G + +   +  GP
Sbjct: 3   VQSSGSVFNVNDYGAK--GAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGP 62

Query: 82  CKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHG-GVIDGKGSGIW---NCK 141
           CK + I  +IDG + A ++     K+  W+ F  ++GL++ G G +DG+G   W   NC 
Sbjct: 63  CKGSKIGFQIDGVVKAPADPSKF-KSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNC- 122

Query: 142 HSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSDPGDSPNT 201
               NC   A NL     ++ ++  + S+NS++F+I V  C ++  Q V V+ PG S NT
Sbjct: 123 DKNPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINT 182

Query: 202 DGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLGRSSDEPG 261
           DGIHV  S  VTI ++ I TGDDCISIGPG+ N+ I  V CGPGHGISIGSLGR ++E  
Sbjct: 183 DGIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKE 242

Query: 262 VKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQNYCPHDKG 321
           V+ +TV   TF+G+ NGVR+K+W     G ATD+ FQ +T++NV+NP+I+DQ YCP+ + 
Sbjct: 243 VRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQC 302

Query: 322 CPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYNDQ--IAKAS 381
                S +K+S + + +I+GTS  ++ V   C+   PC+ + + +I ++Y      A ++
Sbjct: 303 SRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATST 362

Query: 382 CESAKGTASGVVEPA 391
           C + K T SG   PA
Sbjct: 363 CSNVKPTFSGKQVPA 373

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BLAST of CmoCh19G003600 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-73
Identity = 153/373 (41.02%), Postives = 231/373 (61.93%), Query Frame = 0


Query: 26  GLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGTFYVQSGSFNGPCKNN 85
           G +FDI  LGA  +GKTD++  +Q AW  AC  TG  TI +P G F V   +F GPCK +
Sbjct: 38  GGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGD 97

Query: 86  AITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHG-GVIDGKGSGIW--NCKHSGNN 145
            +TI+++G L+A++++        WI    V+ L I G G +DG+G  +W  N      +
Sbjct: 98  -VTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD 157

Query: 146 CPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSDPGDSPNTDGIHV 205
           C     +L +    N  ++G+  +NS+ F++ ++ C+++ I+ V V+ PGDSPNTDGIH+
Sbjct: 158 CKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHM 217

Query: 206 QESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLGRSSDEPGVKNVT 265
            +SS VTI ++ IG GDDCISIGPGT+ + I  VTCGPGHGISIGSLGR  DE  V ++ 
Sbjct: 218 GDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDIN 277

Query: 266 VTSSTFTGSTNGVRIKSWARPSNGF-ATDIHFQHITLDNVKNPIIIDQNYCPHDKGCPHQ 325
           V   T   + NGVRIK++   ++   A+ IH+++I +++   PIIID  YCP+     + 
Sbjct: 278 VKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANG 337

Query: 326 DSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYNDQIAK--ASCESA 385
            S V + +VT+++I GTS+T   V   C    PCTG+T++D+ + Y+    K  A C++A
Sbjct: 338 ASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNA 397

Query: 386 KGTASGVVEPASC 393
           KG+A G ++  +C
Sbjct: 398 KGSAKGCLKELAC 409

[Close]

BLAST of CmoCh19G003600 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 276.6 bits (706), Expect = 4.5e-73
Identity = 150/376 (39.89%), Postives = 221/376 (58.78%), Query Frame = 0


Query: 26  GLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGTFYVQSGSFNGPCKNN 85
           G   D+ + GAK D KTD S+    AW +AC     +TI VP G + V+S  F GPCK  
Sbjct: 67  GAAVDVKASGAKGDSKTDDSAAFAAAWKEAC--AAGSTITVPKGEYMVESLEFKGPCK-G 126

Query: 86  AITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHG--GVIDGKGSGIW---NCKHSG 145
            +T+ ++G   A + ++       WI F+++   +++G   + DG+GS  W   +C  +G
Sbjct: 127 PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTG 186

Query: 146 NNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSDPGDSPNTDGI 205
             C     N+      N  IN + S NS++F++ +  C+N+ +  + +  P +S NTDGI
Sbjct: 187 -KCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGI 246

Query: 206 HVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLGRSSDEPGVKN 265
           H+  S+ V ++ + I TGDDC+SIG GT NL +E+V CGPGHGISIGSLGR  +E  VK 
Sbjct: 247 HIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKG 306

Query: 266 VTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQNYCPHDKGCPH 325
           VTV       + NGVRIK+W     G A++I F+ IT+DNV  P++IDQ YCP+      
Sbjct: 307 VTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAG 366

Query: 326 QDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYN--DQIAKASCES 385
             S VK+S+VT + IKGTSAT++ VK  C+   PCT + L DI + +N  +  A ++C +
Sbjct: 367 VPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 426

Query: 386 AKGTASGVVEPASCLD 395
            K   SG + PA+C +
Sbjct: 427 IKPILSGKLVPAACTE 438

[Close]

BLAST of CmoCh19G003600 vs. ExPASy TrEMBL
Match: A0A6J1F3I5 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439547 PE=3 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 2.0e-225
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60
           MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG
Sbjct: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60

Query: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120
           PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120

Query: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180
           IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180

Query: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240
           VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300
           GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN
Sbjct: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300

Query: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360
           VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360

Query: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD 395
           EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD
Sbjct: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD 394

[Close]

BLAST of CmoCh19G003600 vs. ExPASy TrEMBL
Match: A0A6J1F362 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439543 PE=3 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 4.3e-212
Identity = 370/394 (93.91%), Postives = 383/394 (97.21%), Query Frame = 0


Query: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60
           MALYGTLML+LS  LLLLL + LADGLT DIVSLGAKPDGKTDAS VLQTAW KACDSTG
Sbjct: 1   MALYGTLMLLLSLPLLLLLTYALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120
           PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASS+IQVLAKTKAWIGFKDVNGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLS 120

Query: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180
           IHGGVIDGKGSGIW+CKHSGNNCPDGA NLEI NAQNVII+GLASINSQIFNIVVHGC+N
Sbjct: 121 IHGGVIDGKGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQN 180

Query: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240
           VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300
           GHGISIGSLG+S+DEPGVKNVTVTSSTFT STNGVRIKSWARPS+GFATDIHFQHITLDN
Sbjct: 241 GHGISIGSLGKSADEPGVKNVTVTSSTFTESTNGVRIKSWARPSSGFATDIHFQHITLDN 300

Query: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360
           VKNPIIIDQNYCPHD+GCPHQDSGVKISEVTYEDIKGTSATEIGVKFDC+PTNPCTGLTL
Sbjct: 301 VKNPIIIDQNYCPHDEGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCSPTNPCTGLTL 360

Query: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD 395
           EDIKVTYNDQIAKASC+ AKGTASGVVEPASCL+
Sbjct: 361 EDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE 394

[Close]

BLAST of CmoCh19G003600 vs. ExPASy TrEMBL
Match: A0A6J1IEE1 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472451 PE=3 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.0e-209
Identity = 365/394 (92.64%), Postives = 379/394 (96.19%), Query Frame = 0


Query: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60
           MALYGTLML+LS  LLLLLNH LA GLT DIVSLGAKPDGKTD S VLQTAW KACDSTG
Sbjct: 1   MALYGTLMLLLSLSLLLLLNHALAGGLTLDIVSLGAKPDGKTDVSPVLQTAWAKACDSTG 60

Query: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120
           PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASS+IQVLAKTKAWIGFKDVNGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLS 120

Query: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180
           IHGGVIDGKGS IWNCKHSGNNCPDGA NLEI NAQNVIINGLASINSQIFNIVV+GC+N
Sbjct: 121 IHGGVIDGKGSDIWNCKHSGNNCPDGAPNLEITNAQNVIINGLASINSQIFNIVVYGCQN 180

Query: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240
           VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300
           GHGISIGSLG+S+DEPGVKNVTVTSSTFT +TNGVRIKSW RPS+GFATDIHFQHITL+N
Sbjct: 241 GHGISIGSLGKSADEPGVKNVTVTSSTFTETTNGVRIKSWGRPSSGFATDIHFQHITLEN 300

Query: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360
           VKNPIIIDQNYCPHD+GCPHQDSGVKISEVTYEDIKGTSATEIGVKFDC+PTNPC GLTL
Sbjct: 301 VKNPIIIDQNYCPHDEGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCSPTNPCIGLTL 360

Query: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD 395
           EDIKVTYN+QIAKASC+ AKGTASGVVEPASCL+
Sbjct: 361 EDIKVTYNNQIAKASCKGAKGTASGVVEPASCLE 394

[Close]

BLAST of CmoCh19G003600 vs. ExPASy TrEMBL
Match: A0A6J1IBR5 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472171 PE=3 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 2.6e-209
Identity = 365/394 (92.64%), Postives = 380/394 (96.45%), Query Frame = 0


Query: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60
           MALYGTLML+LS LLLLLLNH LAD LT DIVSLGAKPDGKTDAS VLQTAW KACDSTG
Sbjct: 1   MALYGTLMLLLSLLLLLLLNHALADELTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120
           PATIHVPIGTFYVQSGSFNGPCKNNAITI IDGTLVASS+IQVLAKTKAWIGFKDVNGLS
Sbjct: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITISIDGTLVASSDIQVLAKTKAWIGFKDVNGLS 120

Query: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180
           IHGGVIDGKGSGIWNCKHSGNNCPDGA NLEI NAQNVIINGLASINSQ+FNIVVHGC+N
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGAPNLEITNAQNVIINGLASINSQMFNIVVHGCQN 180

Query: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240
           VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300
           GHGISIGSLG+S+DEPGVKNVTVTSSTFT +TNGVRIKSW RPS+GFATDIHF+HITL+N
Sbjct: 241 GHGISIGSLGKSADEPGVKNVTVTSSTFTETTNGVRIKSWGRPSSGFATDIHFKHITLEN 300

Query: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360
           VKNPIIIDQNYCPHD+GCPHQDSGVKISEVTYEDIKGTSATEIGVKFDC+ TNPC GLTL
Sbjct: 301 VKNPIIIDQNYCPHDEGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCSLTNPCIGLTL 360

Query: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD 395
           EDIKVTYN+QIAKASC+ AKGTASGVVEPASCL+
Sbjct: 361 EDIKVTYNNQIAKASCKGAKGTASGVVEPASCLE 394

[Close]

BLAST of CmoCh19G003600 vs. ExPASy TrEMBL
Match: A0A6J1IDK7 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472169 PE=3 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.7e-208
Identity = 361/394 (91.62%), Postives = 381/394 (96.70%), Query Frame = 0


Query: 1   MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG 60
           MA+Y TLML++   LLLLLNH LADGLT DIVSLGAKPDGKTDAS VLQTAW KACDSTG
Sbjct: 1   MAIYETLMLLIFLPLLLLLNHALADGLTLDIVSLGAKPDGKTDASPVLQTAWAKACDSTG 60

Query: 61  PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS 120
           PA+IHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASS+IQVLAKTKAWI FKDVNGLS
Sbjct: 61  PASIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIEFKDVNGLS 120

Query: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN 180
           IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEI NAQNVIINGLASINSQ+FNIVVHGC+N
Sbjct: 121 IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEITNAQNVIINGLASINSQMFNIVVHGCQN 180

Query: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240
           VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP
Sbjct: 181 VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP 240

Query: 241 GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN 300
           GHGISIGSLG+S++EPGVKNVTVTSSTF+ +TNGVRIKSW RPS+GFATDIHFQHITLDN
Sbjct: 241 GHGISIGSLGKSANEPGVKNVTVTSSTFSETTNGVRIKSWGRPSSGFATDIHFQHITLDN 300

Query: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL 360
           VKNPIIIDQNYCPHDKGCPHQDSGVKIS+VTYEDIKGTSAT+IGVKFDC+PTNPCTGLTL
Sbjct: 301 VKNPIIIDQNYCPHDKGCPHQDSGVKISDVTYEDIKGTSATKIGVKFDCSPTNPCTGLTL 360

Query: 361 EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD 395
           EDIKVTY+DQIAKASC+ AKGTASG+VEPASCL+
Sbjct: 361 EDIKVTYDDQIAKASCKGAKGTASGMVEPASCLE 394

[Close]

BLAST of CmoCh19G003600 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 448.7 bits (1153), Expect = 4.7e-126
Identity = 213/384 (55.47%), Postives = 287/384 (74.74%), Query Frame = 0


Query: 11  LSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGT 70
           L  +LL LL+   +   T++I+S GAKPDGKTD++      W KAC S  P TI VP G 
Sbjct: 5   LLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGR 64

Query: 71  FYVQSGSFNG-PCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVIDGK 130
           F ++S  F+G  CK  ++T RI GTLVA S+ +V+ K   WI F+ ++G+S++GGV+D +
Sbjct: 65  FLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQ 124

Query: 131 GSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVS 190
           G+ +W+CK SG NCP GA ++   +++NV+I+GL S+NSQ+F++ ++GC NV + GVKVS
Sbjct: 125 GASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVS 184

Query: 191 DPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSL 250
             G+SPNTDGIHVQ SS V+IL+S I TGDDC+SIGPGT  LWIE+V CGPGHGISIGSL
Sbjct: 185 ADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSL 244

Query: 251 GRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQ 310
           G+ S E GV+N+TV ++TFTG+ NGVRIKSWARPSNGFA +I FQH  ++NV+NPI+IDQ
Sbjct: 245 GKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQ 304

Query: 311 NYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYND 370
           NYCP ++ CP+Q SG+KIS+V + DI GTSATE+GVK DC+   PCTG+ ++D+K+TY +
Sbjct: 305 NYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRN 364

Query: 371 QIAKASCESAKGTASGVVEPASCL 394
           + A   C  A G+ +G   P SCL
Sbjct: 365 KPATTDCSHAGGSEAGFQRPNSCL 388

[Close]

BLAST of CmoCh19G003600 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 435.6 bits (1119), Expect = 4.1e-122
Identity = 205/367 (55.86%), Postives = 276/367 (75.20%), Query Frame = 0


Query: 28  TFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNA 87
           +++++S GAKPDGKTDA+      W  AC S+ P TI VP G F ++S +F+G  CK   
Sbjct: 20  SYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRFLLRSVTFDGSKCKPKP 79

Query: 88  ITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWNCKHSGNNCPDG 147
           +T RIDGTLVA ++ +V+     WI F+ ++G++++GGV+D +G+ +W+CK SG NCP G
Sbjct: 80  VTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSG 139

Query: 148 ARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSDPGDSPNTDGIHVQESS 207
           A  +   ++ NV+++GL S+NSQ+F++V++GC NV +QGVKV   G+SPNTDGIHVQ SS
Sbjct: 140 ATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSS 199

Query: 208 DVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLGRSSDEPGVKNVTVTSS 267
            V+I ++ I TGDDC+SIGPGT  LWIE+V CGPGHGISIGSLG+ S E GV+NVTV + 
Sbjct: 200 SVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKTV 259

Query: 268 TFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQNYCPHDKGCPHQDSGVK 327
           TFTG+ NGVRIKSWARPS+GFA +I FQH  ++NV+NPIIIDQNYCP D  CP Q SG+K
Sbjct: 260 TFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCP-DHDCPRQVSGIK 319

Query: 328 ISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYNDQIAKASCESAKGTASGV 387
           IS+V + DI GTSATE+GVK DC+   PCTG+ LED+K+TY ++ A ++C  A G  +G 
Sbjct: 320 ISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKPAASACTHAGGIEAGF 379

Query: 388 VEPASCL 394
            +P +CL
Sbjct: 380 FQP-NCL 384

[Close]

BLAST of CmoCh19G003600 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 399.1 bits (1024), Expect = 4.3e-111
Identity = 195/385 (50.65%), Postives = 271/385 (70.39%), Query Frame = 0


Query: 11  LSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGT 70
           L F LL  ++  ++    F++VS GAKPDG TD++     AW  AC S   AT+ VP GT
Sbjct: 10  LLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGT 69

Query: 71  FYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVIDGKG 130
           F ++  +F GPCK+  IT ++ GT++A  + +    +  WI F  VN  S+ GG  D + 
Sbjct: 70  FLLKVITFGGPCKSK-ITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARA 129

Query: 131 SGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSD 190
           +G W+C+ SG NCP G R++   +A++VII+G+ S+NSQ+ ++ ++GC NV ++ VK+  
Sbjct: 130 NGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVA 189

Query: 191 PGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLG 250
           PG+SPNTDG HVQ S+ VT   S + TGDDC++IGPGT NL I  + CGPGHG+SIGSL 
Sbjct: 190 PGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLA 249

Query: 251 RSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQN 310
           +   E GV+NVTV+SS FTGS NGVRIKSWARPSNGF   + FQ + + NV+NPIIIDQN
Sbjct: 250 KELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQN 309

Query: 311 YCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYNDQ 370
           YCP  +GCP++ SGVKIS+VTY++I+GTSAT+  +K  C+ ++PCTG+TL+DIK+TYN  
Sbjct: 310 YCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKG 369

Query: 371 I-AKASCESAKGTASGVVEPASCLD 395
             A + C +A G + GV++P SCL+
Sbjct: 370 TPATSFCFNAVGKSLGVIQPTSCLN 393

[Close]

BLAST of CmoCh19G003600 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 398.7 bits (1023), Expect = 5.6e-111
Identity = 193/385 (50.13%), Postives = 273/385 (70.91%), Query Frame = 0


Query: 11  LSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVPIGT 70
           L F LL  ++   +  + F++VS GAKPDG TD+++    AW  AC S   AT+ VP GT
Sbjct: 10  LIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGT 69

Query: 71  FYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVIDGKG 130
           F ++  +F GPCK+  IT ++ GT+VA  + +    + +WI F  VN  S+ GG  D +G
Sbjct: 70  FLLKVITFGGPCKSK-ITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTFDARG 129

Query: 131 SGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQGVKVSD 190
           SG W+C+ SG NCP G R++   +A++VII+G+ S+NSQ+ ++ ++GC NV ++ +++  
Sbjct: 130 SGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVA 189

Query: 191 PGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISIGSLG 250
           PGDSPNTDG  VQ S+ VT+  S + TGDDC++IG GT N  I  + CGPGHG+SIGSL 
Sbjct: 190 PGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSLA 249

Query: 251 RSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPIIIDQN 310
           +  +E GV+NVTV+SS FTGS NGVRIKSWARPS GF  ++ FQ++ + NV+NPIIIDQN
Sbjct: 250 KQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIIIDQN 309

Query: 311 YCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKVTYNDQ 370
           YCP ++GCP + SGVKI++VTY++I+GTSAT+  +K  C+ +NPCTG+TL+DIK+TYN  
Sbjct: 310 YCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYNKG 369

Query: 371 I-AKASCESAKGTASGVVEPASCLD 395
             A + C +A G   GV++P SCL+
Sbjct: 370 TPATSLCFNAVGKNLGVIQPTSCLN 393

[Close]

BLAST of CmoCh19G003600 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 391.7 bits (1005), Expect = 6.8e-109
Identity = 201/388 (51.80%), Postives = 272/388 (70.10%), Query Frame = 0


Query: 8   MLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTGPATIHVP 67
           ++IL F L+  L H +    T +++S GAKPDG  D++     AW  AC S  P TI VP
Sbjct: 14  LIILDFTLISSLAHPIPS--TLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVP 73

Query: 68  IGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLSIHGGVI 127
            G F V +  F+G  CK   I+IRI G++VA  + +++A +K WI F+DV  +SI+GG++
Sbjct: 74  KGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGIL 133

Query: 128 DGKGSGIWNCKHS-GNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRNVNIQG 187
           D +G+ +W CK++ G+NCP GA++L    + N+ I+GL SINSQ F+IV+    NVNI G
Sbjct: 134 DAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDG 193

Query: 188 VKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 247
           VKVS   +SPNTDGIHV+ S  V I +S IGTGDDCISIGPG+TN++I+++ CGPGHGIS
Sbjct: 194 VKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 253

Query: 248 IGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDNVKNPI 307
           IGSLGR+ +E GV NVTV++  F G+ NGVRIK+W + SN FA +I FQHI +  VKNPI
Sbjct: 254 IGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPI 313

Query: 308 IIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTLEDIKV 367
           IIDQ+YC H K CP Q+SGVK+S V YEDI GTS TE+ V  DC+   PCTG+ ++D+ +
Sbjct: 314 IIDQHYCLH-KPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNL 373

Query: 368 TYNDQIAKASCESAKGTASGVVEPASCL 394
               + A+ASC++A G+A+ VV    CL
Sbjct: 374 VSVHRPAQASCDNANGSANDVVPFTPCL 398

The following BLAST results are available for this feature:

BLAST of CmoCh19G003600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	8.6e-133	58.59	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	9.6e-108	51.80	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q6H9K0	1.8e-74	40.00	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P35339	2.6e-73	41.02	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P49063	4.5e-73	39.89	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of CmoCh19G003600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3I5	2.0e-225	100.00	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439547 PE=3 SV=1	[more]
A0A6J1F362	4.3e-212	93.91	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439543 PE=3 SV=1	[more]
A0A6J1IEE1	2.0e-209	92.64	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472451 PE=3 SV=1	[more]
A0A6J1IBR5	2.6e-209	92.64	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472171 PE=3 SV=1	[more]
A0A6J1IDK7	1.7e-208	91.62	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111472169 PE=3 SV=1	[more]

BLAST of CmoCh19G003600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	4.7e-126	55.47	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	4.1e-122	55.86	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	4.3e-111	50.65	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	5.6e-111	50.13	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	6.8e-109	51.80	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 228..248 e-value: 6300.0 score: 1.5 coord: 178..204 e-value: 11.0 score: 15.0 coord: 205..226 e-value: 2100.0 score: 4.9 coord: 258..279 e-value: 0.91 score: 18.6 coord: 288..309 e-value: 3400.0 score: 3.4
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 56..380 e-value: 3.6E-86 score: 289.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 235..248
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 23..392 e-value: 6.3E-106 score: 356.8
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 13..392
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 13..392
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 13..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003600.1	CmoCh19G003600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity